TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2478075.2.1
(807 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BZ342617.1|BZ342617 ic85b08.g1 WGS-SbicolorF (JM107 adap... 149 9e-061
gb|CF481323.1|CF481323 POL1_71_G04.b1_A002 Pollen Sorghum b... 166 4e-056
gb|CD213941.1|CD213941 HS1_69_D10.b1_A012 Heat-shocked seed... 164 6e-056
gb|CN140129.1|CN140129 OX1_34_F04.b1_A002 Oxidatively-stres... 166 2e-055
gb|CW217794.1|CW217794 104_651_11195844_116_37071_046 Sorgh... 166 5e-055
gb|CF486636.1|CF486636 POL1_38_H01.g1_A002 Pollen Sorghum b... 166 1e-054
gb|CD235225.1|CD235225 SS1_28_G08.b1_A012 Salt-stressed see... 167 6e-046
gb|CD211706.1|CD211706 HS1_64_A05.b1_A012 Heat-shocked seed... 165 2e-040
gb|CW026784.1|CW026784 104_253_10498144_114_30533 Sorghum m... 165 2e-040
gb|CF489721.1|CF489721 POL1_59_F07.b1_A002 Pollen Sorghum b... 155 4e-037
gb|BM323867.1|BM323867 PIC1_28_E11.b1_A002 Pathogen-infecte... 63 5e-022
gb|AW923239.1|AW923239 DG1_50_B02.g1_A002 Dark Grown 1 (DG1... 74 6e-022
gb|CD430521.1|CD430521 ETH1_19_G03.b1_A002 Ethylene-treated... 73 1e-021
gb|CN129564.1|CN129564 RHOH1_36_D05.b3_A002 Acid- and alkal... 63 2e-021
gb|CX622482.1|CX622482 GABR1_64_F02.b2_A002 GA- or brassino... 63 2e-021
gb|CW266100.1|CW266100 104_735_11232246_116_35270_019 Sorgh... 63 2e-021
gb|CW357455.1|CW357455 fsbb001f024b23f0 Sorghum methylation... 63 2e-021
gb|BM322422.1|BM322422 PIC1_4_F03.b1_A002 Pathogen-infected... 63 2e-021
gb|BE592953.1|BE592953 WS1_92_E01.b1_A002 Water-stressed 1 ... 63 2e-021
gb|BE599911.1|BE599911 PI1_77_B10.b1_A002 Pathogen induced ... 63 2e-021
gb|CW042374.1|CW042374 104_276_10507075_116_30488 Sorghum m... 63 2e-021
gb|CW027607.1|CW027607 104_254_10498612_116_30396 Sorghum m... 73 4e-021
gb|CX609835.1|CX609835 ANR1_15_B09.b1_A002 Anaerobic roots ... 62 8e-021
>gb|BZ342617.1|BZ342617 ic85b08.g1 WGS-SbicolorF (JM107 adapted methyl filtered) Sorghum
bicolor genomic clone ic85b08 5', DNA sequence
Length = 638
Score = 149 bits (319), Expect(3) = 9e-061
Identities = 63/78 (80%), Positives = 65/78 (83%)
Frame = -3 / +1
Query: 589 DPAVKSTW*TSLMSGWKRPKCCSTPSALPFSLNMANR*VSRAFPGRRGVPPSTCRTTLLL 410
+ AVKSTW*TSLMSGWKRPKCCSTPSALPFSLNMANR VS AFPGRRGVPP TC TTLLL
Sbjct: 217 EAAVKSTW*TSLMSGWKRPKCCSTPSALPFSLNMANRYVSTAFPGRRGVPPPTCATTLLL 396
Query: 409 YAAAFSTLAPSPPADGQP 356
YAAAFST A +P
Sbjct: 397 YAAAFSTXGAVAAAARRP 450
Score = 126 bits (270), Expect(2) = 4e-055
Identities = 51/56 (91%), Positives = 52/56 (92%)
Frame = +3 / -1
Query: 438 GGTPRRPGKALETYLFAMFNENGKAEGVEQHFGLFQPDMSEVYHVDFTAGSP*GGS 605
GGTPRRPGKA+ETYLFAMFNENGKAEGVEQHFGLFQPDMSEVYHVDFTA S * S
Sbjct: 368 GGTPRRPGKAVETYLFAMFNENGKAEGVEQHFGLFQPDMSEVYHVDFTAASS*ASS 201
Score = 110 bits (234), Expect(2) = 4e-055
Identities = 45/51 (88%), Positives = 48/51 (94%)
Frame = +3 / -3
Query: 225 AGAASTVTDGGAVYTNMFDAIVDATHAAVEKAGVQGLELVVSETGWPSAGG 377
A ++S+VTDGG VYTNMFDAIVDATHAAVEKAGVQGLELVVSETGWPS GG
Sbjct: 585 AASSSSVTDGGVVYTNMFDAIVDATHAAVEKAGVQGLELVVSETGWPSGGG 433
Score = 104 bits (222), Expect(3) = 9e-061
Identities = 43/47 (91%), Positives = 43/47 (91%)
Frame = -3 / +2
Query: 376 PPADGQPVSDTTSSSPCTPAFSTAACVASTIASNMLVYTAPPSVTVD 236
PP DG PVSDTTSSSPCTPAFSTAACVASTIASNMLVYT PPSVT D
Sbjct: 434 PPPDGHPVSDTTSSSPCTPAFSTAACVASTIASNMLVYTTPPSVTDD 574
Score = 23.5 bits (45), Expect(3) = 9e-061
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = -3 / +1
Query: 805 NPWRRVTTCTVMN 767
NPW VT CT M+
Sbjct: 127 NPWDGVTPCTGMH 165
>gb|CF481323.1|CF481323 POL1_71_G04.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_71_G04_A002 3', mRNA sequence
Length = 606
Score = 166 bits (357), Expect(2) = 1e-040
Identities = 73/118 (61%), Positives = 83/118 (70%)
Frame = -3 / -1
Query: 589 DPAVKSTW*TSLMSGWKRPKCCSTPSALPFSLNMANR*VSRAFPGRRGVPPSTCRTTLLL 410
+ AVKSTW*TSLMSGWKRPKCCSTPSALPFSLNMANR VS AFPGRRGVPP TCRTTLLL
Sbjct: 459 EAAVKSTW*TSLMSGWKRPKCCSTPSALPFSLNMANRYVSTAFPGRRGVPPPTCRTTLLL 280
Query: 409 YAAAFSTLAPSPPADGQPVSDTTSSSPCTPAFSTAACVASTIASNMLVYTAPPSVTVD 236
YAAAFST+APSPP T+SS + A ++ ++ ++ P D
Sbjct: 279 YAAAFSTVAPSPPPPDGHPVSDTTSSSPCTPAFSTAACVASTIASNMLVYTTPPSVTD 106
Score = 129 bits (277), Expect(2) = 4e-056
Identities = 54/78 (69%), Positives = 56/78 (71%)
Frame = +3 / +2
Query: 372 GGEGXXXXXXXXXXXXXXXXXDGGTPRRPGKALETYLFAMFNENGKAEGVEQHFGLFQPD 551
GG+G GGTPRRPGKA+ETYLFAMFNENGKAEGVEQHFGLFQPD
Sbjct: 242 GGDGATVENAAAYNNNVVRHVGGGTPRRPGKAVETYLFAMFNENGKAEGVEQHFGLFQPD 421
Query: 552 MSEVYHVDFTAGSP*GGS 605
MSEVYHVDFTA S * S
Sbjct: 422 MSEVYHVDFTAASS*ASS 475
Score = 113 bits (242), Expect(2) = 6e-027
Identities = 50/69 (72%), Positives = 52/69 (75%)
Frame = -3 / -1
Query: 442 PPSTCRTTLLLYAAAFSTLAPSPPADGQPVSDTTSSSPCTPAFSTAACVASTIASNMLVY 263
PP+ T LL AA + PP DG PVSDTTSSSPCTPAFSTAACVASTIASNMLVY
Sbjct: 309 PPTCRTTLLLYAAAFSTVAPSPPPPDGHPVSDTTSSSPCTPAFSTAACVASTIASNMLVY 130
Query: 262 TAPPSVTVD 236
T PPSVT D
Sbjct: 129 TTPPSVTDD 103
Score = 110 bits (234), Expect(2) = 4e-056
Identities = 45/51 (88%), Positives = 48/51 (94%)
Frame = +3 / +2
Query: 225 AGAASTVTDGGAVYTNMFDAIVDATHAAVEKAGVQGLELVVSETGWPSAGG 377
A ++S+VTDGG VYTNMFDAIVDATHAAVEKAGVQGLELVVSETGWPS GG
Sbjct: 92 AASSSSVTDGGVVYTNMFDAIVDATHAAVEKAGVQGLELVVSETGWPSGGG 244
Score = 28.6 bits (56), Expect(2) = 6e-027
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = -2 / -3
Query: 488 GEQVGLQGLPGPPR 447
GEQV L GLP PPR
Sbjct: 358 GEQVRLHGLPWPPR 317
Score = 23.5 bits (45), Expect(2) = 1e-040
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = -3 / -1
Query: 805 NPWRRVTTCTVMN 767
NPW VT CT M+
Sbjct: 549 NPWDGVTPCTGMH 511
>gb|CD213941.1|CD213941 HS1_69_D10.b1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_69_D10_A012 3', mRNA sequence
Length = 652
Score = 164 bits (352), Expect(2) = 7e-040
Identities = 72/118 (61%), Positives = 83/118 (70%)
Frame = -3 / -3
Query: 589 DPAVKSTW*TSLMSGWKRPKCCSTPSALPFSLNMANR*VSRAFPGRRGVPPSTCRTTLLL 410
+ AVKSTW*TSLMSGWKRPKCCSTPSALPFSLNMANR VS AFPGRRGVPP TCRTTLLL
Sbjct: 470 EAAVKSTW*TSLMSGWKRPKCCSTPSALPFSLNMANRYVSTAFPGRRGVPPPTCRTTLLL 291
Query: 409 YAAAFSTLAPSPPADGQPVSDTTSSSPCTPAFSTAACVASTIASNMLVYTAPPSVTVD 236
+AAAFST+APSPP T+SS + A ++ ++ ++ P D
Sbjct: 290 HAAAFSTVAPSPPPPDGHPVSDTTSSSPCTPAFSTAACVASTIASNMLVYTTPPSVTD 117
Score = 129 bits (276), Expect(2) = 6e-056
Identities = 54/78 (69%), Positives = 56/78 (71%)
Frame = +3 / +1
Query: 372 GGEGXXXXXXXXXXXXXXXXXDGGTPRRPGKALETYLFAMFNENGKAEGVEQHFGLFQPD 551
GG+G GGTPRRPGKA+ETYLFAMFNENGKAEGVEQHFGLFQPD
Sbjct: 253 GGDGATVENAAACNNNVVRHVGGGTPRRPGKAVETYLFAMFNENGKAEGVEQHFGLFQPD 432
Query: 552 MSEVYHVDFTAGSP*GGS 605
MSEVYHVDFTA S * S
Sbjct: 433 MSEVYHVDFTAASS*ASS 486
Score = 112 bits (240), Expect(2) = 1e-026
Identities = 50/69 (72%), Positives = 52/69 (75%)
Frame = -3 / -3
Query: 442 PPSTCRTTLLLYAAAFSTLAPSPPADGQPVSDTTSSSPCTPAFSTAACVASTIASNMLVY 263
PP+ T LL AA + PP DG PVSDTTSSSPCTPAFSTAACVASTIASNMLVY
Sbjct: 320 PPTCRTTLLLHAAAFSTVAPSPPPPDGHPVSDTTSSSPCTPAFSTAACVASTIASNMLVY 141
Query: 262 TAPPSVTVD 236
T PPSVT D
Sbjct: 140 TTPPSVTDD 114
Score = 110 bits (234), Expect(2) = 6e-056
Identities = 45/51 (88%), Positives = 48/51 (94%)
Frame = +3 / +1
Query: 225 AGAASTVTDGGAVYTNMFDAIVDATHAAVEKAGVQGLELVVSETGWPSAGG 377
A ++S+VTDGG VYTNMFDAIVDATHAAVEKAGVQGLELVVSETGWPS GG
Sbjct: 103 AASSSSVTDGGVVYTNMFDAIVDATHAAVEKAGVQGLELVVSETGWPSGGG 255
Score = 28.6 bits (56), Expect(2) = 1e-026
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = -2 / -2
Query: 488 GEQVGLQGLPGPPR 447
GEQV L GLP PPR
Sbjct: 369 GEQVRLHGLPWPPR 328
Score = 23.5 bits (45), Expect(2) = 7e-040
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = -3 / -3
Query: 805 NPWRRVTTCTVMN 767
NPW VT CT M+
Sbjct: 560 NPWDGVTPCTGMH 522
>gb|CN140129.1|CN140129 OX1_34_F04.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_34_F04_A002 3', mRNA sequence
Length = 700
Score = 166 bits (358), Expect(2) = 1e-040
Identities = 74/122 (60%), Positives = 84/122 (68%)
Frame = -3 / -1
Query: 589 DPAVKSTW*TSLMSGWKRPKCCSTPSALPFSLNMANR*VSRAFPGRRGVPPSTCRTTLLL 410
+ AVKSTW*TSLMSGWKRPKCCSTPSALPFSLNMANR VS AFPGRRGVPP TCRTTLLL
Sbjct: 517 EAAVKSTW*TSLMSGWKRPKCCSTPSALPFSLNMANRYVSTAFPGRRGVPPPTCRTTLLL 338
Query: 409 YAAAFSTLAPSPPADGQPVSDTTSSSPCTPAFSTAACVASTIASNMLVYTAPPSVTVDAA 230
YAAAFST+APSPP T+SS + A ++ ++ ++ P D
Sbjct: 337 YAAAFSTVAPSPPPPDGHPVSDTTSSSPCTPAFSTAACVASTIASNMLVYTTPPSVTDGD 158
Query: 229 PA 224
A
Sbjct: 157 DA 152
Score = 129 bits (277), Expect(2) = 2e-055
Identities = 54/78 (69%), Positives = 56/78 (71%)
Frame = +3 / +3
Query: 372 GGEGXXXXXXXXXXXXXXXXXDGGTPRRPGKALETYLFAMFNENGKAEGVEQHFGLFQPD 551
GG+G GGTPRRPGKA+ETYLFAMFNENGKAEGVEQHFGLFQPD
Sbjct: 300 GGDGATVENAAAYNNNVVRHVGGGTPRRPGKAVETYLFAMFNENGKAEGVEQHFGLFQPD 479
Query: 552 MSEVYHVDFTAGSP*GGS 605
MSEVYHVDFTA S * S
Sbjct: 480 MSEVYHVDFTAASS*ASS 533
Score = 112 bits (239), Expect(2) = 1e-026
Identities = 49/67 (73%), Positives = 51/67 (76%)
Frame = -3 / -1
Query: 442 PPSTCRTTLLLYAAAFSTLAPSPPADGQPVSDTTSSSPCTPAFSTAACVASTIASNMLVY 263
PP+ T LL AA + PP DG PVSDTTSSSPCTPAFSTAACVASTIASNMLVY
Sbjct: 367 PPTCRTTLLLYAAAFSTVAPSPPPPDGHPVSDTTSSSPCTPAFSTAACVASTIASNMLVY 188
Query: 262 TAPPSVT 242
T PPSVT
Sbjct: 187 TTPPSVT 167
Score = 107 bits (229), Expect(2) = 2e-055
Identities = 44/51 (86%), Positives = 47/51 (92%)
Frame = +3 / +3
Query: 225 AGAASTVTDGGAVYTNMFDAIVDATHAAVEKAGVQGLELVVSETGWPSAGG 377
A ++ +VTDGG VYTNMFDAIVDATHAAVEKAGVQGLELVVSETGWPS GG
Sbjct: 150 AASSPSVTDGGVVYTNMFDAIVDATHAAVEKAGVQGLELVVSETGWPSGGG 302
Score = 28.6 bits (56), Expect(2) = 1e-026
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = -2 / -3
Query: 488 GEQVGLQGLPGPPR 447
GEQV L GLP PPR
Sbjct: 416 GEQVRLHGLPWPPR 375
Score = 23.5 bits (45), Expect(2) = 1e-040
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = -3 / -1
Query: 805 NPWRRVTTCTVMN 767
NPW VT CT M+
Sbjct: 607 NPWDGVTPCTGMH 569
>gb|CW217794.1|CW217794 104_651_11195844_116_37071_046 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11195844, DNA
sequence
Length = 548
Score = 166 bits (357), Expect(2) = 1e-040
Identities = 73/118 (61%), Positives = 83/118 (70%)
Frame = -3 / +1
Query: 589 DPAVKSTW*TSLMSGWKRPKCCSTPSALPFSLNMANR*VSRAFPGRRGVPPSTCRTTLLL 410
+ AVKSTW*TSLMSGWKRPKCCSTPSALPFSLNMANR VS AFPGRRGVPP TCRTTLLL
Sbjct: 166 EAAVKSTW*TSLMSGWKRPKCCSTPSALPFSLNMANRYVSTAFPGRRGVPPPTCRTTLLL 345
Query: 409 YAAAFSTLAPSPPADGQPVSDTTSSSPCTPAFSTAACVASTIASNMLVYTAPPSVTVD 236
YAAAFST+APSPP T+SS + A ++ ++ ++ P D
Sbjct: 346 YAAAFSTVAPSPPPPDGHPVSDTTSSSPCTPAFSTAACVASTIASNMLVYTTPPSVTD 519
Score = 129 bits (277), Expect(2) = 5e-055
Identities = 54/78 (69%), Positives = 56/78 (71%)
Frame = +3 / -1
Query: 372 GGEGXXXXXXXXXXXXXXXXXDGGTPRRPGKALETYLFAMFNENGKAEGVEQHFGLFQPD 551
GG+G GGTPRRPGKA+ETYLFAMFNENGKAEGVEQHFGLFQPD
Sbjct: 383 GGDGATVENAAAYNNNVVRHVGGGTPRRPGKAVETYLFAMFNENGKAEGVEQHFGLFQPD 204
Query: 552 MSEVYHVDFTAGSP*GGS 605
MSEVYHVDFTA S * S
Sbjct: 203 MSEVYHVDFTAASS*ASS 150
Score = 112 bits (239), Expect(2) = 1e-026
Identities = 49/67 (73%), Positives = 51/67 (76%)
Frame = -3 / +1
Query: 442 PPSTCRTTLLLYAAAFSTLAPSPPADGQPVSDTTSSSPCTPAFSTAACVASTIASNMLVY 263
PP+ T LL AA + PP DG PVSDTTSSSPCTPAFSTAACVASTIASNMLVY
Sbjct: 316 PPTCRTTLLLYAAAFSTVAPSPPPPDGHPVSDTTSSSPCTPAFSTAACVASTIASNMLVY 495
Query: 262 TAPPSVT 242
T PPSVT
Sbjct: 496 TTPPSVT 516
Score = 106 bits (226), Expect(2) = 5e-055
Identities = 44/51 (86%), Positives = 47/51 (92%)
Frame = +3 / -1
Query: 225 AGAASTVTDGGAVYTNMFDAIVDATHAAVEKAGVQGLELVVSETGWPSAGG 377
A ++ +VTDGG VYTNMFDAIVDATHAAVEKAGVQGLELVVSETGWPS GG
Sbjct: 533 AASS*SVTDGGVVYTNMFDAIVDATHAAVEKAGVQGLELVVSETGWPSGGG 381
Score = 28.6 bits (56), Expect(2) = 1e-026
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = -2 / +3
Query: 488 GEQVGLQGLPGPPR 447
GEQV L GLP PPR
Sbjct: 267 GEQVRLHGLPWPPR 308
Score = 23.5 bits (45), Expect(2) = 1e-040
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = -3 / +1
Query: 805 NPWRRVTTCTVMN 767
NPW VT CT M+
Sbjct: 76 NPWDGVTPCTGMH 114
>gb|CF486636.1|CF486636 POL1_38_H01.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_38_H01_A002 5', mRNA sequence
Length = 536
Score = 166 bits (357), Expect(2) = 1e-040
Identities = 73/118 (61%), Positives = 83/118 (70%)
Frame = -3 / +2
Query: 589 DPAVKSTW*TSLMSGWKRPKCCSTPSALPFSLNMANR*VSRAFPGRRGVPPSTCRTTLLL 410
+ AVKSTW*TSLMSGWKRPKCCSTPSALPFSLNMANR VS AFPGRRGVPP TCRTTLLL
Sbjct: 182 EAAVKSTW*TSLMSGWKRPKCCSTPSALPFSLNMANRYVSTAFPGRRGVPPPTCRTTLLL 361
Query: 409 YAAAFSTLAPSPPADGQPVSDTTSSSPCTPAFSTAACVASTIASNMLVYTAPPSVTVD 236
YAAAFST+APSPP T+SS + A ++ ++ ++ P D
Sbjct: 362 YAAAFSTVAPSPPPPDGHPVSDTTSSSPCTPAFSTAACVASTIASNMLVYTTPPSVTD 535
Score = 129 bits (277), Expect(2) = 1e-054
Identities = 54/78 (69%), Positives = 56/78 (71%)
Frame = +3 / -3
Query: 372 GGEGXXXXXXXXXXXXXXXXXDGGTPRRPGKALETYLFAMFNENGKAEGVEQHFGLFQPD 551
GG+G GGTPRRPGKA+ETYLFAMFNENGKAEGVEQHFGLFQPD
Sbjct: 399 GGDGATVENAAAYNNNVVRHVGGGTPRRPGKAVETYLFAMFNENGKAEGVEQHFGLFQPD 220
Query: 552 MSEVYHVDFTAGSP*GGS 605
MSEVYHVDFTA S * S
Sbjct: 219 MSEVYHVDFTAASS*ASS 166
Score = 112 bits (239), Expect(2) = 1e-026
Identities = 49/67 (73%), Positives = 51/67 (76%)
Frame = -3 / +2
Query: 442 PPSTCRTTLLLYAAAFSTLAPSPPADGQPVSDTTSSSPCTPAFSTAACVASTIASNMLVY 263
PP+ T LL AA + PP DG PVSDTTSSSPCTPAFSTAACVASTIASNMLVY
Sbjct: 332 PPTCRTTLLLYAAAFSTVAPSPPPPDGHPVSDTTSSSPCTPAFSTAACVASTIASNMLVY 511
Query: 262 TAPPSVT 242
T PPSVT
Sbjct: 512 TTPPSVT 532
Score = 105 bits (224), Expect(2) = 1e-054
Identities = 43/46 (93%), Positives = 44/46 (95%)
Frame = +3 / -3
Query: 240 TVTDGGAVYTNMFDAIVDATHAAVEKAGVQGLELVVSETGWPSAGG 377
+VTDGG VYTNMFDAIVDATHAAVEKAGVQGLELVVSETGWPS GG
Sbjct: 534 SVTDGGVVYTNMFDAIVDATHAAVEKAGVQGLELVVSETGWPSGGG 397
Score = 28.6 bits (56), Expect(2) = 1e-026
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = -2 / +1
Query: 488 GEQVGLQGLPGPPR 447
GEQV L GLP PPR
Sbjct: 283 GEQVRLHGLPWPPR 324
Score = 23.5 bits (45), Expect(2) = 1e-040
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = -3 / +2
Query: 805 NPWRRVTTCTVMN 767
NPW VT CT M+
Sbjct: 92 NPWDGVTPCTGMH 130
>gb|CD235225.1|CD235225 SS1_28_G08.b1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_28_G08_A012 3', mRNA sequence
Length = 590
Score = 167 bits (360), Expect(2) = 5e-041
Identities = 71/86 (82%), Positives = 74/86 (86%)
Frame = -3 / -1
Query: 589 DPAVKSTW*TSLMSGWKRPKCCSTPSALPFSLNMANR*VSRAFPGRRGVPPSTCRTTLLL 410
+ AVKSTW*TSLMSGWKRPKCCSTPSALPFSLNMANR VS AFPGRRGVPPSTCRTTLLL
Sbjct: 308 EAAVKSTW*TSLMSGWKRPKCCSTPSALPFSLNMANRYVSTAFPGRRGVPPSTCRTTLLL 129
Query: 409 YAAAFSTLAPSPPADGQPVSDTTSSS 332
YAAAFST+APSPP T+SS
Sbjct: 128 YAAAFSTVAPSPPPPDGHPVSDTTSS 51
Score = 133 bits (284), Expect(2) = 6e-046
Identities = 55/78 (70%), Positives = 57/78 (73%)
Frame = +3 / +1
Query: 372 GGEGXXXXXXXXXXXXXXXXXDGGTPRRPGKALETYLFAMFNENGKAEGVEQHFGLFQPD 551
GG+G DGGTPRRPGKA+ETYLFAMFNENGKAEGVEQHFGLFQPD
Sbjct: 91 GGDGATVENAAAYNNNVVRHVDGGTPRRPGKAVETYLFAMFNENGKAEGVEQHFGLFQPD 270
Query: 552 MSEVYHVDFTAGSP*GGS 605
MSEVYHVDFTA S * S
Sbjct: 271 MSEVYHVDFTAASS*ASS 324
Score = 73.0 bits (153), Expect(2) = 6e-046
Identities = 30/31 (96%), Positives = 30/31 (96%)
Frame = +3 / +1
Query: 285 IVDATHAAVEKAGVQGLELVVSETGWPSAGG 377
IVDATHAAVEKAGVQGLELVVSETGWPS GG
Sbjct: 1 IVDATHAAVEKAGVQGLELVVSETGWPSGGG 93
Score = 23.5 bits (45), Expect(2) = 5e-041
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = -3 / -1
Query: 805 NPWRRVTTCTVMN 767
NPW VT CT M+
Sbjct: 398 NPWDGVTPCTGMH 360
>gb|CD211706.1|CD211706 HS1_64_A05.b1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_64_A05_A012 3', mRNA sequence
Length = 402
Score = 165 bits (355), Expect(2) = 2e-040
Identities = 70/86 (81%), Positives = 73/86 (84%)
Frame = -3 / -2
Query: 589 DPAVKSTW*TSLMSGWKRPKCCSTPSALPFSLNMANR*VSRAFPGRRGVPPSTCRTTLLL 410
+ AVKSTW*TSLMSGWKRPKCCSTPSALPFSLNMANR VS AFPGRRGVPP TCRTTLLL
Sbjct: 266 EAAVKSTW*TSLMSGWKRPKCCSTPSALPFSLNMANRYVSTAFPGRRGVPPPTCRTTLLL 87
Query: 409 YAAAFSTLAPSPPADGQPVSDTTSSS 332
YAAAFST+APSPP T+SS
Sbjct: 86 YAAAFSTVAPSPPPPDGHPVSDTTSS 9
Score = 129 bits (277), Expect(2) = 8e-036
Identities = 54/78 (69%), Positives = 56/78 (71%)
Frame = +3 / +1
Query: 372 GGEGXXXXXXXXXXXXXXXXXDGGTPRRPGKALETYLFAMFNENGKAEGVEQHFGLFQPD 551
GG+G GGTPRRPGKA+ETYLFAMFNENGKAEGVEQHFGLFQPD
Sbjct: 49 GGDGATVENAAAYNNNVVRHVGGGTPRRPGKAVETYLFAMFNENGKAEGVEQHFGLFQPD 228
Query: 552 MSEVYHVDFTAGSP*GGS 605
MSEVYHVDFTA S * S
Sbjct: 229 MSEVYHVDFTAASS*ASS 282
Score = 42.3 bits (86), Expect(2) = 8e-036
Identities = 16/17 (94%), Positives = 16/17 (94%)
Frame = +3 / +1
Query: 327 QGLELVVSETGWPSAGG 377
QGLELVVSETGWPS GG
Sbjct: 1 QGLELVVSETGWPSGGG 51
Score = 23.5 bits (45), Expect(2) = 2e-040
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = -3 / -2
Query: 805 NPWRRVTTCTVMN 767
NPW VT CT M+
Sbjct: 356 NPWDGVTPCTGMH 318
>gb|CW026784.1|CW026784 104_253_10498144_114_30533 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10498144, DNA
sequence
Length = 533
Score = 165 bits (355), Expect(2) = 2e-040
Identities = 70/86 (81%), Positives = 73/86 (84%)
Frame = -3 / +2
Query: 589 DPAVKSTW*TSLMSGWKRPKCCSTPSALPFSLNMANR*VSRAFPGRRGVPPSTCRTTLLL 410
+ AVKSTW*TSLMSGWKRPKCCSTPSALPFSLNMANR VS AFPGRRGVPP TCRTTLLL
Sbjct: 248 EAAVKSTW*TSLMSGWKRPKCCSTPSALPFSLNMANRYVSTAFPGRRGVPPPTCRTTLLL 427
Query: 409 YAAAFSTLAPSPPADGQPVSDTTSSS 332
YAAAFST+APSPP T+SS
Sbjct: 428 YAAAFSTVAPSPPPPDGHPVSDTTSS 505
Score = 129 bits (277), Expect(2) = 1e-039
Identities = 54/78 (69%), Positives = 56/78 (71%)
Frame = +3 / -3
Query: 372 GGEGXXXXXXXXXXXXXXXXXDGGTPRRPGKALETYLFAMFNENGKAEGVEQHFGLFQPD 551
GG+G GGTPRRPGKA+ETYLFAMFNENGKAEGVEQHFGLFQPD
Sbjct: 465 GGDGATVENAAAYNNNVVRHVGGGTPRRPGKAVETYLFAMFNENGKAEGVEQHFGLFQPD 286
Query: 552 MSEVYHVDFTAGSP*GGS 605
MSEVYHVDFTA S * S
Sbjct: 285 MSEVYHVDFTAASS*ASS 232
Score = 55.1 bits (114), Expect(2) = 1e-039
Identities = 22/23 (95%), Positives = 22/23 (95%)
Frame = +3 / -3
Query: 309 VEKAGVQGLELVVSETGWPSAGG 377
VEKAGVQGLELVVSETGWPS GG
Sbjct: 531 VEKAGVQGLELVVSETGWPSGGG 463
Score = 23.5 bits (45), Expect(2) = 2e-040
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = -3 / +2
Query: 805 NPWRRVTTCTVMN 767
NPW VT CT M+
Sbjct: 158 NPWDGVTPCTGMH 196
>gb|CF489721.1|CF489721 POL1_59_F07.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_59_F07_A002 3', mRNA sequence
Length = 649
Score = 155 bits (332), Expect(2) = 4e-037
Identities = 67/86 (77%), Positives = 70/86 (81%)
Frame = -3 / -1
Query: 589 DPAVKSTW*TSLMSGWKRPKCCSTPSALPFSLNMANR*VSRAFPGRRGVPPSTCRTTLLL 410
+ AVKSTW*TSLMSGWKRPKCCSTPSALPFSLNMANR VS AFPGRRGVPP T RTTLLL
Sbjct: 463 EAAVKSTW*TSLMSGWKRPKCCSTPSALPFSLNMANRYVSTAFPGRRGVPPPTRRTTLLL 284
Query: 409 YAAAFSTLAPSPPADGQPVSDTTSSS 332
Y A FST+APSPP T+SS
Sbjct: 283 YHAPFSTVAPSPPPPDGHPVSDTTSS 206
Score = 126 bits (270), Expect(2) = 2e-035
Identities = 51/56 (91%), Positives = 52/56 (92%)
Frame = +3 / +3
Query: 438 GGTPRRPGKALETYLFAMFNENGKAEGVEQHFGLFQPDMSEVYHVDFTAGSP*GGS 605
GGTPRRPGKA+ETYLFAMFNENGKAEGVEQHFGLFQPDMSEVYHVDFTA S * S
Sbjct: 312 GGTPRRPGKAVETYLFAMFNENGKAEGVEQHFGLFQPDMSEVYHVDFTAASS*ASS 479
Score = 44.1 bits (90), Expect(2) = 2e-035
Identities = 17/18 (94%), Positives = 17/18 (94%)
Frame = +3 / +3
Query: 324 VQGLELVVSETGWPSAGG 377
VQGLELVVSETGWPS GG
Sbjct: 195 VQGLELVVSETGWPSGGG 248
Score = 23.5 bits (45), Expect(2) = 4e-037
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = -3 / -1
Query: 805 NPWRRVTTCTVMN 767
NPW VT CT M+
Sbjct: 553 NPWDGVTPCTGMH 515
>gb|BM323867.1|BM323867 PIC1_28_E11.b1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 502
Score = 63.4 bits (132), Expect(2) = 5e-022
Identities = 24/38 (63%), Positives = 30/38 (78%)
Frame = +3 / +2
Query: 465 ALETYLFAMFNENGKAEGVEQHFGLFQPDMSEVYHVDF 578
A+ETYLF+MFNEN K GVEQ++GLF P+M VY + F
Sbjct: 329 AIETYLFSMFNENQKESGVEQNWGLFYPNMQRVYPISF 442
Score = 62.5 bits (130), Expect(2) = 5e-022
Identities = 25/50 (50%), Positives = 33/50 (66%)
Frame = +3 / +2
Query: 231 AASTVTDGGAVYTNMFDAIVDATHAAVEKAGVQGLELVVSETGWPSAGGE 380
+ + V DG Y N+FD VDA + A+ + G G+ LVVSE+GWPS GGE
Sbjct: 98 SGTVVQDGAYGYQNLFDTTVDAFYVAMGRNGGSGVPLVVSESGWPSGGGE 247
>gb|AW923239.1|AW923239 DG1_50_B02.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 550
Score = 73.9 bits (155), Expect(4) = 6e-022
Identities = 31/61 (50%), Positives = 39/61 (63%)
Frame = +3 / +1
Query: 195 SGSVGPTQPGAGAASTVTDGGAVYTNMFDAIVDATHAAVEKAGVQGLELVVSETGWPSAG 374
S S P T G YTN+ DA+VDA +AA+EKAG G+++VVSE+GWPSAG
Sbjct: 22 SASSSPASDRGRPTVTDGGNGLAYTNLLDAMVDAIYAALEKAGAPGVQVVVSESGWPSAG 201
Query: 375 G 377
G
Sbjct: 202 G 204
Score = 35.0 bits (70), Expect(4) = 6e-022
Identities = 11/20 (55%), Positives = 16/20 (80%)
Frame = +3 / +1
Query: 519 VEQHFGLFQPDMSEVYHVDF 578
+E+HFGLF PD + VY ++F
Sbjct: 346 IERHFGLFNPDKTPVYPINF 405
Score = 31.8 bits (63), Expect(4) = 6e-022
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = +3 / +1
Query: 468 LETYLFAMFNENGK 509
LETY+FAMFNEN K
Sbjct: 292 LETYVFAMFNENQK 333
Score = 21.7 bits (41), Expect(4) = 6e-022
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +3 / +1
Query: 441 GTPRRPG 461
GTPRRPG
Sbjct: 268 GTPRRPG 288
>gb|CD430521.1|CD430521 ETH1_19_G03.b1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_19_G03_A002 3', mRNA sequence
Length = 557
Score = 72.5 bits (152), Expect(4) = 1e-021
Identities = 29/49 (59%), Positives = 37/49 (75%)
Frame = +3 / +1
Query: 231 AASTVTDGGAVYTNMFDAIVDATHAAVEKAGVQGLELVVSETGWPSAGG 377
A T G YTN+ DA+VDA +AA+EKAG G+++VVSE+GWPSAGG
Sbjct: 55 ATVTDGGNGLAYTNLLDAMVDAIYAALEKAGAPGVQVVVSESGWPSAGG 201
Score = 35.0 bits (70), Expect(4) = 1e-021
Identities = 11/20 (55%), Positives = 16/20 (80%)
Frame = +3 / +1
Query: 519 VEQHFGLFQPDMSEVYHVDF 578
+E+HFGLF PD + VY ++F
Sbjct: 343 IERHFGLFNPDKTPVYPINF 402
Score = 31.8 bits (63), Expect(4) = 1e-021
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = +3 / +1
Query: 468 LETYLFAMFNENGK 509
LETY+FAMFNEN K
Sbjct: 289 LETYVFAMFNENQK 330
Score = 21.7 bits (41), Expect(4) = 1e-021
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +3 / +1
Query: 441 GTPRRPG 461
GTPRRPG
Sbjct: 265 GTPRRPG 285
>gb|CN129564.1|CN129564 RHOH1_36_D05.b3_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_36_D05_A002 3', mRNA sequence
Length = 796
Score = 63.4 bits (132), Expect(2) = 2e-021
Identities = 24/38 (63%), Positives = 30/38 (78%)
Frame = +3 / +1
Query: 465 ALETYLFAMFNENGKAEGVEQHFGLFQPDMSEVYHVDF 578
A+ETYLF+MFNEN K GVEQ++GLF P+M VY + F
Sbjct: 232 AIETYLFSMFNENQKESGVEQNWGLFYPNMQRVYPISF 345
Score = 60.2 bits (125), Expect(2) = 2e-021
Identities = 24/49 (48%), Positives = 32/49 (65%)
Frame = +3 / +1
Query: 231 AASTVTDGGAVYTNMFDAIVDATHAAVEKAGVQGLELVVSETGWPSAGG 377
+ + V DG Y N+FD VDA + A+ + G G+ LVVSE+GWPS GG
Sbjct: 1 SGTVVQDGAYGYQNLFDTTVDAFYVAMGRNGGSGVPLVVSESGWPSGGG 147
>gb|CX622482.1|CX622482 GABR1_64_F02.b2_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_64_F02_A002 3', mRNA sequence
Length = 733
Score = 63.4 bits (132), Expect(2) = 2e-021
Identities = 24/38 (63%), Positives = 30/38 (78%)
Frame = +3 / +3
Query: 465 ALETYLFAMFNENGKAEGVEQHFGLFQPDMSEVYHVDF 578
A+ETYLF+MFNEN K GVEQ++GLF P+M VY + F
Sbjct: 240 AIETYLFSMFNENQKESGVEQNWGLFYPNMQRVYPISF 353
Score = 60.2 bits (125), Expect(2) = 2e-021
Identities = 24/49 (48%), Positives = 32/49 (65%)
Frame = +3 / +3
Query: 231 AASTVTDGGAVYTNMFDAIVDATHAAVEKAGVQGLELVVSETGWPSAGG 377
+ + V DG Y N+FD VDA + A+ + G G+ LVVSE+GWPS GG
Sbjct: 9 SGTVVQDGAYGYQNLFDTTVDAFYVAMGRNGGSGVPLVVSESGWPSGGG 155
>gb|CW266100.1|CW266100 104_735_11232246_116_35270_019 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11232246, DNA
sequence
Length = 683
Score = 63.4 bits (132), Expect(2) = 2e-021
Identities = 24/38 (63%), Positives = 30/38 (78%)
Frame = +3 / -2
Query: 465 ALETYLFAMFNENGKAEGVEQHFGLFQPDMSEVYHVDF 578
A+ETYLF+MFNEN K GVEQ++GLF P+M VY + F
Sbjct: 373 AIETYLFSMFNENQKESGVEQNWGLFYPNMQRVYPISF 260
Score = 60.2 bits (125), Expect(2) = 2e-021
Identities = 24/49 (48%), Positives = 32/49 (65%)
Frame = +3 / -2
Query: 231 AASTVTDGGAVYTNMFDAIVDATHAAVEKAGVQGLELVVSETGWPSAGG 377
+ + V DG Y N+FD VDA + A+ + G G+ LVVSE+GWPS GG
Sbjct: 604 SGTVVQDGAYGYQNLFDTTVDAFYVAMGRNGGSGVPLVVSESGWPSGGG 458
>gb|CW357455.1|CW357455 fsbb001f024b23f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f024b23, DNA
sequence
Length = 636
Score = 63.4 bits (132), Expect(2) = 2e-021
Identities = 24/38 (63%), Positives = 30/38 (78%)
Frame = +3 / -3
Query: 465 ALETYLFAMFNENGKAEGVEQHFGLFQPDMSEVYHVDF 578
A+ETYLF+MFNEN K GVEQ++GLF P+M VY + F
Sbjct: 214 AIETYLFSMFNENQKESGVEQNWGLFYPNMQRVYPISF 101
Score = 60.2 bits (125), Expect(2) = 2e-021
Identities = 24/49 (48%), Positives = 32/49 (65%)
Frame = +3 / -3
Query: 231 AASTVTDGGAVYTNMFDAIVDATHAAVEKAGVQGLELVVSETGWPSAGG 377
+ + V DG Y N+FD VDA + A+ + G G+ LVVSE+GWPS GG
Sbjct: 445 SGTVVQDGAYGYQNLFDTTVDAFYVAMGRNGGSGVPLVVSESGWPSGGG 299
>gb|BM322422.1|BM322422 PIC1_4_F03.b1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 600
Score = 63.4 bits (132), Expect(2) = 2e-021
Identities = 24/38 (63%), Positives = 30/38 (78%)
Frame = +3 / +2
Query: 465 ALETYLFAMFNENGKAEGVEQHFGLFQPDMSEVYHVDF 578
A+ETYLF+MFNEN K GVEQ++GLF P+M VY + F
Sbjct: 431 AIETYLFSMFNENQKESGVEQNWGLFYPNMQRVYPISF 544
Score = 60.2 bits (125), Expect(2) = 2e-021
Identities = 24/49 (48%), Positives = 32/49 (65%)
Frame = +3 / +2
Query: 231 AASTVTDGGAVYTNMFDAIVDATHAAVEKAGVQGLELVVSETGWPSAGG 377
+ + V DG Y N+FD VDA + A+ + G G+ LVVSE+GWPS GG
Sbjct: 200 SGTVVQDGAYGYQNLFDTTVDAFYVAMGRNGGSGVPLVVSESGWPSGGG 346
>gb|BE592953.1|BE592953 WS1_92_E01.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 583
Score = 63.4 bits (132), Expect(2) = 2e-021
Identities = 24/38 (63%), Positives = 30/38 (78%)
Frame = +3 / +3
Query: 465 ALETYLFAMFNENGKAEGVEQHFGLFQPDMSEVYHVDF 578
A+ETYLF+MFNEN K GVEQ++GLF P+M VY + F
Sbjct: 414 AIETYLFSMFNENQKESGVEQNWGLFYPNMQRVYPISF 527
Score = 60.2 bits (125), Expect(2) = 2e-021
Identities = 24/49 (48%), Positives = 32/49 (65%)
Frame = +3 / +3
Query: 231 AASTVTDGGAVYTNMFDAIVDATHAAVEKAGVQGLELVVSETGWPSAGG 377
+ + V DG Y N+FD VDA + A+ + G G+ LVVSE+GWPS GG
Sbjct: 183 SGTVVQDGAYGYQNLFDTTVDAFYVAMGRNGGSGVPLVVSESGWPSGGG 329
>gb|BE599911.1|BE599911 PI1_77_B10.b1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 551
Score = 63.4 bits (132), Expect(2) = 2e-021
Identities = 24/38 (63%), Positives = 30/38 (78%)
Frame = +3 / +1
Query: 465 ALETYLFAMFNENGKAEGVEQHFGLFQPDMSEVYHVDF 578
A+ETYLF+MFNEN K GVEQ++GLF P+M VY + F
Sbjct: 403 AIETYLFSMFNENQKESGVEQNWGLFYPNMQRVYPISF 516
Score = 60.2 bits (125), Expect(2) = 2e-021
Identities = 24/49 (48%), Positives = 32/49 (65%)
Frame = +3 / +1
Query: 231 AASTVTDGGAVYTNMFDAIVDATHAAVEKAGVQGLELVVSETGWPSAGG 377
+ + V DG Y N+FD VDA + A+ + G G+ LVVSE+GWPS GG
Sbjct: 172 SGTVVQDGAYGYQNLFDTTVDAFYVAMGRNGGSGVPLVVSESGWPSGGG 318
>gb|CW042374.1|CW042374 104_276_10507075_116_30488 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10507075, DNA
sequence
Length = 459
Score = 63.4 bits (132), Expect(2) = 2e-021
Identities = 24/38 (63%), Positives = 30/38 (78%)
Frame = +3 / -1
Query: 465 ALETYLFAMFNENGKAEGVEQHFGLFQPDMSEVYHVDF 578
A+ETYLF+MFNEN K GVEQ++GLF P+M VY + F
Sbjct: 168 AIETYLFSMFNENQKESGVEQNWGLFYPNMQRVYPISF 55
Score = 60.2 bits (125), Expect(2) = 2e-021
Identities = 24/49 (48%), Positives = 32/49 (65%)
Frame = +3 / -1
Query: 231 AASTVTDGGAVYTNMFDAIVDATHAAVEKAGVQGLELVVSETGWPSAGG 377
+ + V DG Y N+FD VDA + A+ + G G+ LVVSE+GWPS GG
Sbjct: 399 SGTVVQDGAYGYQNLFDTTVDAFYVAMGRNGGSGVPLVVSESGWPSGGG 253
>gb|CW027607.1|CW027607 104_254_10498612_116_30396 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10498612, DNA
sequence
Length = 797
Score = 72.5 bits (152), Expect(4) = 4e-021
Identities = 29/49 (59%), Positives = 37/49 (75%)
Frame = +3 / -3
Query: 231 AASTVTDGGAVYTNMFDAIVDATHAAVEKAGVQGLELVVSETGWPSAGG 377
A T G YTN+ DA+VDA +AA+EKAG G+++VVSE+GWPSAGG
Sbjct: 771 ATVTDGGNGLAYTNLLDAMVDAIYAALEKAGAPGVQVVVSESGWPSAGG 625
Score = 35.0 bits (70), Expect(4) = 4e-021
Identities = 11/20 (55%), Positives = 16/20 (80%)
Frame = +3 / -3
Query: 519 VEQHFGLFQPDMSEVYHVDF 578
+E+HFGLF PD + VY ++F
Sbjct: 483 IERHFGLFNPDKTPVYPINF 424
Score = 31.8 bits (63), Expect(4) = 4e-021
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = +3 / -3
Query: 468 LETYLFAMFNENGK 509
LETY+FAMFNEN K
Sbjct: 537 LETYVFAMFNENQK 496
Score = 21.7 bits (41), Expect(4) = 4e-021
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +3 / -3
Query: 441 GTPRRPG 461
GTPRRPG
Sbjct: 561 GTPRRPG 541
>gb|CX609835.1|CX609835 ANR1_15_B09.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_15_B09_A002 3', mRNA sequence
Length = 784
Score = 61.6 bits (128), Expect(2) = 8e-021
Identities = 23/38 (60%), Positives = 30/38 (78%)
Frame = +3 / +2
Query: 465 ALETYLFAMFNENGKAEGVEQHFGLFQPDMSEVYHVDF 578
A+ETYLF+MFNEN K GVEQ++GLF P+M V+ + F
Sbjct: 281 AIETYLFSMFNENQKESGVEQNWGLFYPNMQRVFPISF 394
Score = 60.2 bits (125), Expect(2) = 8e-021
Identities = 24/49 (48%), Positives = 32/49 (65%)
Frame = +3 / +2
Query: 231 AASTVTDGGAVYTNMFDAIVDATHAAVEKAGVQGLELVVSETGWPSAGG 377
+ + V DG Y N+FD VDA + A+ + G G+ LVVSE+GWPS GG
Sbjct: 50 SGTVVQDGAYGYQNLFDTTVDAFYVAMGRNGGSGVPLVVSESGWPSGGG 196
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 692,166,979
Number of Sequences: 832831
Number of extensions: 8722425
Number of successful extensions: 101210
Number of sequences better than 1.0e-020: 25
length of database: 163,786,556
effective HSP length: 54
effective length of database: 118,813,682
effective search space used: 25426127948
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)