TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2448637.2.1
(1190 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CD204626.1|CD204626 HS1_9_B12.b1_A012 Heat-shocked seedl... 358 e-101
gb|CW202998.1|CW202998 104_629_11185396_148_37061_008 Sorgh... 242 2e-081
gb|CX608982.1|CX608982 ANR1_10_A02.b1_A002 Anaerobic roots ... 199 9e-079
gb|CF761496.1|CF761496 DSAF1_77_A06.b1_A011 Drought-stresse... 282 2e-078
gb|BE361697.1|BE361697 DG1_81_F02.g1_A002 Dark Grown 1 (DG1... 199 4e-061
gb|BG051633.1|BG051633 FM1_59_B11.g1_A003 Floral-Induced Me... 232 8e-060
gb|BI351515.1|BI351515 IP1_72_G08.g1_A002 Immature pannicle... 230 3e-059
gb|BE363303.1|BE363303 WS1_61_A11.g1_A002 Water-stressed 1 ... 199 5e-050
gb|CN139927.1|CN139927 OX1_33_B02.b1_A002 Oxidatively-stres... 194 2e-048
gb|BF585867.1|BF585867 FM1_25_E03.g1_A003 Floral-Induced Me... 189 8e-047
gb|BF588277.1|BF588277 FM1_39_G09.b1_A003 Floral-Induced Me... 179 8e-044
gb|BF481484.1|BF481484 FM1_19_G01.g1_A003 Floral-Induced Me... 178 2e-043
gb|BF587717.1|BF587717 FM1_39_G09.g1_A003 Floral-Induced Me... 168 2e-040
gb|BG558719.1|BG558719 RHIZ2_59_F04.g1_A003 Rhizome2 (RHIZ2... 166 8e-040
gb|CD204731.1|CD204731 HS1_9_B12.g1_A012 Heat-shocked seedl... 152 8e-036
gb|CD429244.1|CD429244 ETH1_3_A10.b1_A002 Ethylene-treated ... 143 5e-033
gb|CL152854.1|CL152854 104_336_10780290_114_31365_306 Sorgh... 127 4e-032
gb|BF587758.1|BF587758 FM1_33_B08.g1_A003 Floral-Induced Me... 87 1e-031
gb|BZ349363.1|BZ349363 hq90g06.g1 WGS-SbicolorF (JM107 adap... 77 8e-023
gb|BF481329.1|BF481329 FM1_18_F06.g1_A003 Floral-Induced Me... 107 3e-022
>gb|CD204626.1|CD204626 HS1_9_B12.b1_A012 Heat-shocked seedlings Sorghum bicolor cDNA clone
HS1_9_B12_A012 3', mRNA sequence
Length = 654
Score = 358 bits (776), Expect(2) = e-101
Identities = 143/148 (96%), Positives = 147/148 (99%)
Frame = -3 / +1
Query: 828 EAATLARWVCQSYHYHLGMELLNQSDGAGEALLKMLWHHPDAVLCCSFKEKPMFTFANKA 649
EAATLARWVCQSYHYHLG+ELLNQSD AGEALLKMLWHHPDAVLCCSFKEKPMFTFANKA
Sbjct: 1 EAATLARWVCQSYHYHLGLELLNQSDEAGEALLKMLWHHPDAVLCCSFKEKPMFTFANKA 180
Query: 648 GLDMLETSLVALQDLTLDKIFDESGRKALFSDISKLMEQGYAYLPSGVCMSGMGRHVSFD 469
GLDMLETSL+ALQDLTLDKIFDESGRKA+FSDISKLMEQGYAYLPSGVCMSGMGRHVSFD
Sbjct: 181 GLDMLETSLIALQDLTLDKIFDESGRKAIFSDISKLMEQGYAYLPSGVCMSGMGRHVSFD 360
Query: 468 QAVAWKVLGEDSNIHCLAFCFVNWSFV* 385
QAVAWKVLGEDSN+HCLAFCFVNWSFV*
Sbjct: 361 QAVAWKVLGEDSNVHCLAFCFVNWSFV* 444
Score = 325 bits (704), Expect(2) = 1e-091
Identities = 140/147 (95%), Positives = 141/147 (95%)
Frame = +2 / -2
Query: 386 HTKDQLTKQNARQWMLLSSPSTFHATAWSKETWRPIPDMHTPDGRYA*PCSISFEMSENS 565
HTKDQLTKQNARQ LLSSPSTFHATAWSKETWRPIPDMHTPDGRYA*PCSISFE+SEN
Sbjct: 443 HTKDQLTKQNARQCTLLSSPSTFHATAWSKETWRPIPDMHTPDGRYA*PCSISFEISENI 264
Query: 566 AFLPDSSKILSSVRSCSATRDVSNMSSPALFANVNIGFSLKEQHRTASG*CQSIFNNASP 745
AFLPDSSKILSSVRSCSA RDVSNMSSPALFANVNIGFSLKEQHRTASG*CQSIFNNASP
Sbjct: 263 AFLPDSSKILSSVRSCSAIRDVSNMSSPALFANVNIGFSLKEQHRTASG*CQSIFNNASP 84
Query: 746 APSD*LSNSIPRW***LWQTHLASVAA 826
A SD*LSNS PRW***LWQTHLASVAA
Sbjct: 83 ASSD*LSNSKPRW***LWQTHLASVAA 3
Score = 273 bits (591), Expect(2) = 3e-075
Identities = 118/155 (76%), Positives = 126/155 (81%)
Frame = -2 / +3
Query: 826 SCHTC*MGLPELSLPSRYGXXXXXXXXXXXIVENALASSRCCSVLLL*GETYVYVCKQGR 647
SCHTC*MGLPELSLPSR+G IVENALASSR CSVLL *GETYVY+CKQGR
Sbjct: 3 SCHTC*MGLPELSLPSRFGIT*SIR*SWRSIVENALASSRRCSVLLF*GETYVYICKQGR 182
Query: 646 AGHVRNISCCAARPDARQDLRRVRKESTILRHLETNGTGLRVPAVRRVHVRNGPPCFFRP 467
A HVRNIS CAARPD RQD RRVRKES ILR+L+TNGTGLR+PA+R VHVRNG PCFFRP
Sbjct: 183 A*HVRNISYCAARPDTRQDFRRVRKESNILRYLKTNGTGLRIPAIRCVHVRNGSPCFFRP 362
Query: 466 SCSVEGARRG*QHPLPGVLLRQLVLRVTEVQPVGW 362
SC VEGAR G Q LPG+LLRQLVLRVT +GW
Sbjct: 363 SCGVEGAR*GQQRALPGILLRQLVLRVTPTCRMGW 467
Score = 263 bits (568), Expect(2) = 1e-072
Identities = 118/148 (79%), Positives = 125/148 (84%)
Frame = +1 / -1
Query: 385 SHEGPVDEAERQAVDVAILAEHLPRYSLVERNMXXXXXXXXXXRQVRVALFH*FRDV*E* 564
SHEGPVDEAE QAV VA+L EHLPR+SLVERNM QV VALFH*F D+*E
Sbjct: 444 SHEGPVDEAECQAVHVAVLTEHLPRHSLVERNMATHS*HAHT*WQVCVALFH*F*DI*EY 265
Query: 565 CFPS*LVEDLV*RQVLQRNKRCF*HVQPCLVCKRKHRFLLKGAAQNSIWMMPEHFQQCFT 744
CFPS*LVE+LV* QVLQRNKRCF*HV+PCLVCK KHRFLLK AAQNS+WMMPEHFQQCF
Sbjct: 264 CFPS*LVENLV*CQVLQRNKRCF*HVKPCLVCKCKHRFLLKRAAQNSVWMMPEHFQQCFA 85
Query: 745 SSI*LIK*FHT*MVVITLANPSSKCGSF 828
S I*LIK*F T*MV+ITLANPSSKCGSF
Sbjct: 84 SFI*LIK*FQT*MVMITLANPSSKCGSF 1
Score = 260 bits (562), Expect(2) = 2e-070
Identities = 115/137 (83%), Positives = 119/137 (86%)
Frame = +3 / -3
Query: 417 PGSGCCYPRRAPSTLQLGRKKHGGPFLTCTRLTAGTRSPVPLVSRCLRIVLSFLTRRRSC 596
PGS C P RAPST QLGRKKHG PFLTCT L AG RSPVPLV R LRI+LSFLTRR+SC
Sbjct: 412 PGSARCCPHRAPSTPQLGRKKHGDPFLTCTHLMAGMRSPVPLVLRYLRILLSFLTRRKSC 233
Query: 597 LASGLAAQQEMFLTCPALPCLQT*T*VSP*RSSTEQHLDDARAFSTMLHQLHLID*VIPY 776
L SGLAAQ EMFLTC ALPCLQ *T*VSP*+SSTEQ LDDARAFSTML QLHLID*VIP
Sbjct: 232 LVSGLAAQ*EMFLTCQALPCLQM*T*VSP*KSSTEQRLDDARAFSTMLRQLHLID*VIPN 53
Query: 777 LDGSDNSGKPI*QVWQL 827
LDG+DNSGKPI*QVWQL
Sbjct: 52 LDGNDNSGKPI*QVWQL 2
Score = 144 bits (309), Expect(3) = 3e-060
Identities = 60/67 (89%), Positives = 61/67 (91%)
Frame = -1 / +2
Query: 827 KLPHLLDGFARVITTI*VWNYLINQMELVKHC*KCSGIIQMLFCAAPLRRNLCLRLQTRQ 648
KLPHLLDGFARVI TI*VWNYLINQM+L KHC*KCSGIIQ LFCAA LRRNLCL LQTRQ
Sbjct: 2 KLPHLLDGFARVIITI*VWNYLINQMKLAKHC*KCSGIIQTLFCAALLRRNLCLHLQTRQ 181
Query: 647 GWTC*KH 627
G TC*KH
Sbjct: 182 GLTC*KH 202
Score = 105 bits (224), Expect(3) = 3e-060
Identities = 42/65 (64%), Positives = 43/65 (66%)
Frame = -1 / +2
Query: 578 QEGKHYSQTSRN*WNRATRTCRQACACQEWAAMFLSTKL*RGRCXXXXXXXXXXXXXXXT 399
QEGK YSQ S+N*WNRAT TC Q CACQEW AMFLSTKL RGRC T
Sbjct: 251 QEGKQYSQISQN*WNRATHTCHQVCACQEWVAMFLSTKLWRGRCSVRTATCTAWHSASST 430
Query: 398 GPSCD 384
GPSCD
Sbjct: 431 GPSCD 445
Score = 33.6 bits (67), Expect(2) = 1e-091
Identities = 16/21 (76%), Positives = 18/21 (85%)
Frame = +1 / -3
Query: 271 DQFLQLVHATYAFCHS**FSI 333
+Q LQLV AT AFCHS**FS+
Sbjct: 586 NQDLQLVIAT*AFCHS**FSL 524
Score = 33.1 bits (66), Expect(2) = 1e-072
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +2 / -1
Query: 281 FN*CMQHMPFVTADDFPYK 337
+N* +QH F TADDFPY+
Sbjct: 576 YN**LQHKHFATADDFPYQ 520
Score = 32.2 bits (64), Expect(2) = e-101
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -1 / +3
Query: 329 ENHQL*QKAYVACTS*RNWSNCFF 258
ENHQL Q AYVA TS R+ C +
Sbjct: 528 ENHQLWQNAYVAITSCRS*FQCIY 599
Score = 30.9 bits (61), Expect(2) = 3e-075
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = -3 / +2
Query: 330 GKSSAVTKGICCMH*LKKLV 271
GKSSAV K +CC H*L L+
Sbjct: 527 GKSSAVAKCLCCNH*L*VLI 586
Score = 28.1 bits (55), Expect(2) = 2e-070
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +3 / -2
Query: 282 STSACNICLLSQLMIF 329
+TS CNI +L QLMIF
Sbjct: 575 TTSDCNISILPQLMIF 528
Score = 23.1 bits (44), Expect(3) = 3e-060
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = -2 / +1
Query: 328 KIISCDKRHMLHALV 284
KIISC K ML +LV
Sbjct: 529 KIISCGKMLMLQSLV 573
>gb|CW202998.1|CW202998 104_629_11185396_148_37061_008 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11185396, DNA
sequence
Length = 692
Score = 242 bits (523), Expect(2) = 1e-079
Identities = 98/110 (89%), Positives = 102/110 (92%)
Frame = +1 / +1
Query: 784 VVITLANPSSKCGSFREARKHPMPSI*TRLGGRYSHRHSLHSRNDTTNILTGHCCNAVLK 963
++ITLANPSSKCGSFREARKHP+PSI*TRLGGRYSHRHSLHSRN+TTNILTGH CN VLK
Sbjct: 358 LLITLANPSSKCGSFREARKHPLPSI*TRLGGRYSHRHSLHSRNNTTNILTGHSCNTVLK 537
Query: 964 VHLIRELKGDCQHRSQIAVIWRCIP*GLGCSRAHIKTRCQI*RXTXXYTI 1113
VHLIRELKGDCQHRSQI VIWRCIP*GLGCSR HIKTRCQI*R YTI
Sbjct: 538 VHLIRELKGDCQHRSQITVIWRCIP*GLGCSRTHIKTRCQI*RPGRGYTI 687
Score = 234 bits (505), Expect(2) = 2e-081
Identities = 100/108 (92%), Positives = 101/108 (93%)
Frame = -3 / -3
Query: 1113 DGVXXGXTLDLASSLDVGSAAPQASGDASPDDCNLRSVLTIAFQFPYEMHLQDSVAAMAR 934
DGV TLDLASSLDVGSAAPQASGDASPDDCNLRSVLTIAFQFPYEMHLQDSVA MAR
Sbjct: 687 DGVASARTLDLASSLDVGSAAPQASGDASPDDCNLRSVLTIAFQFPYEMHLQDSVATMAR 508
Query: 933 QYVRSVISAVQRVSMAISPSQSGLNAGHRMLSGFPEAATLARWVCQSY 790
QYVR V+SAVQRVSMAISPSQSGLNAG RMLSGFPEAATLARWVCQSY
Sbjct: 507 QYVRGVVSAVQRVSMAISPSQSGLNAGQRMLSGFPEAATLARWVCQSY 364
Score = 231 bits (498), Expect(2) = 1e-062
Identities = 93/102 (91%), Positives = 95/102 (93%)
Frame = -1 / -1
Query: 1091 R*IWHLVLMWALLHPKPQGMHLQMTAI*DLC*QSPFNSRMRCTFRTALQQWPVNMFVVSF 912
R*IWHLVLMW LLHPKPQGMHLQMT I*DLC*QSPFNS MRCTF+T LQ WPVNMFVV F
Sbjct: 665 R*IWHLVLMWVLLHPKPQGMHLQMTVI*DLC*QSPFNSLMRCTFKTVLQLWPVNMFVVLF 486
Query: 911 LLCKECRWLYLPPNLV*MLGIGCFLASLKLPHLLDGFARVIT 786
LLCKECRWLYLPPNLV*MLG GCFLASLKLPHLLDGFARVI+
Sbjct: 485 LLCKECRWLYLPPNLV*MLGRGCFLASLKLPHLLDGFARVIS 360
Score = 231 bits (498), Expect(2) = 2e-076
Identities = 93/109 (85%), Positives = 96/109 (88%)
Frame = -2 / -2
Query: 1111 WCXXXXXARFGI*S*CGLCCTPSLRGCISR*LQFEICADNRLSIPV*DAPSGQRCSNGPS 932
WC ARFGI*S*CG CCTPSLRGCISR*L FEICADNRLSIP+*DAPS Q C+ GPS
Sbjct: 685 WCSLCQDARFGI*S*CGFCCTPSLRGCISR*L*FEICADNRLSIPL*DAPSRQCCNYGPS 506
Query: 931 ICS*CHFCCAKSVDGYISLPIWSKCWA*DAFWLP*SCHTC*MGLPELSL 785
ICS C FCCAKSVDGYISLPIWSKCWA DAFWLP*SCHTC*MGLPELS+
Sbjct: 505 ICSWCCFCCAKSVDGYISLPIWSKCWAEDAFWLP*SCHTC*MGLPELSV 359
Score = 227 bits (490), Expect(2) = 2e-074
Identities = 101/109 (92%), Positives = 101/109 (92%)
Frame = +2 / +2
Query: 788 **LWQTHLASVAASGKPESILCPAFRPDWEGDIAIDTLCTAEMTLRTY*RAIAATLS*RC 967
**LWQTHLASVAASGKPESILCPAFRPDWEGDIAIDTLCTAE T RTY*RAI ATLS*RC
Sbjct: 362 **LWQTHLASVAASGKPESILCPAFRPDWEGDIAIDTLCTAETTPRTY*RAIVATLS*RC 541
Query: 968 ISYGN*KAIVSTDLKLQSSGDASPEAWGAAEPTSRLDAKSSVXPXXTPS 1114
IS GN*KAIVSTDLKLQSSGDASPEAWGAAEPTSRLDAKSSV TPS
Sbjct: 542 IS*GN*KAIVSTDLKLQSSGDASPEAWGAAEPTSRLDAKSSVLAEATPS 688
Score = 221 bits (477), Expect(2) = 2e-072
Identities = 94/109 (86%), Positives = 98/109 (89%)
Frame = +3 / +3
Query: 786 SDNSGKPI*QVWQLQGSQKASYAQHLDQIGREI*PSTLFAQQK*HYEHIDGPLLQRCPEG 965
+DNSGKPI*QVWQLQGSQKAS AQHLDQIGREI*PSTLFAQQK H+EHIDGP LQ C EG
Sbjct: 360 TDNSGKPI*QVWQLQGSQKASSAQHLDQIGREI*PSTLFAQQKQHHEHIDGP*LQHCLEG 539
Query: 966 ASHTGIERRLSAQISNCSHLEMHPLRLGVQQSPHQD*MPNLAXXXXIHH 1112
ASH GIERRLSAQISN SHLEMHPLRLGVQQ+PHQD*MPNLA +HH
Sbjct: 540 ASHKGIERRLSAQISNYSHLEMHPLRLGVQQNPHQD*MPNLASWQRLHH 686
Score = 90.9 bits (192), Expect(2) = 2e-081
Identities = 35/42 (83%), Positives = 36/42 (85%)
Frame = -3 / -3
Query: 792 YHYHLGMELLNQSDGAGEALLKMLWHHPDAVLCCSFKEKPMF 667
Y YHLG+ELLNQSD AGEALLKMLWHHPDAVLCCSFK F
Sbjct: 255 YSYHLGLELLNQSDEAGEALLKMLWHHPDAVLCCSFKVSEEF 130
Score = 77.6 bits (163), Expect(2) = 2e-076
Identities = 32/35 (91%), Positives = 33/35 (94%)
Frame = -1 / -1
Query: 785 TI*VWNYLINQMELVKHC*KCSGIIQMLFCAAPLR 681
TI*VWNYLINQM+LVKHC*KCSGIIQ LFCAA LR
Sbjct: 248 TI*VWNYLINQMKLVKHC*KCSGIIQTLFCAALLR 144
Score = 77.1 bits (162), Expect(2) = 1e-079
Identities = 34/40 (85%), Positives = 35/40 (87%)
Frame = +2 / +2
Query: 668 NIGFSLKEQHRTASG*CQSIFNNASPAPSD*LSNSIPRW* 787
N +LKEQHRTASG*CQSIFNNASPA SD*LSNS PRW*
Sbjct: 131 NSSDTLKEQHRTASG*CQSIFNNASPASSD*LSNSKPRW* 250
Score = 74.4 bits (156), Expect(2) = 2e-074
Identities = 32/36 (88%), Positives = 34/36 (94%)
Frame = +3 / +3
Query: 681 P*RSSTEQHLDDARAFSTMLHQLHLID*VIPYLDGS 788
P*+SSTEQ LDDARAFSTMLHQLHLID*VIP LDG+
Sbjct: 144 P*KSSTEQRLDDARAFSTMLHQLHLID*VIPNLDGN 251
Score = 73.9 bits (155), Expect(2) = 2e-072
Identities = 31/37 (83%), Positives = 33/37 (89%)
Frame = +1 / +1
Query: 682 LKGAAQNSIWMMPEHFQQCFTSSI*LIK*FHT*MVVI 792
LK AAQNS+WMMPEHFQQCFTS I*LIK*F T*MV +
Sbjct: 145 LKRAAQNSVWMMPEHFQQCFTSFI*LIK*FQT*MVTV 255
Score = 34.5 bits (69), Expect(2) = 1e-062
Identities = 16/18 (88%), Positives = 16/18 (88%)
Frame = -2 / -2
Query: 733 VENALASSRCCSVLLL*G 680
VENALASSR CSVLL *G
Sbjct: 196 VENALASSRRCSVLLF*G 143
>gb|CX608982.1|CX608982 ANR1_10_A02.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_10_A02_A002 3', mRNA sequence
Length = 833
Score = 199 bits (430), Expect(3) = 9e-079
Identities = 74/119 (62%), Positives = 99/119 (83%)
Frame = -3 / +3
Query: 741 EALLKMLWHHPDAVLCCSFKEKPMFTFANKAGLDMLETSLVALQDLTLDKIFDESGRKAL 562
E +LK LWHH A+LCCS K P+FTFAN++GLDMLET+LVALQD+TL+K+FD+ GRK L
Sbjct: 330 EGVLKTLWHHASAILCCSLKALPVFTFANQSGLDMLETTLVALQDITLEKVFDDQGRKNL 509
Query: 561 FSDISKLMEQGYAYLPSGVCMSGMGRHVSFDQAVAWKVLGEDSNIHCLAFCFVNWSFV* 385
+++ +MEQG+ +PSG+C+SG+GR VS+++A+AWKVL +DS HC+ F FVNWSFV*
Sbjct: 510 CAELPGIMEQGFTCIPSGLCVSGLGRPVSYEKALAWKVLDDDSGAHCICFMFVNWSFV* 686
Score = 119 bits (255), Expect(2) = 5e-031
Identities = 59/119 (49%), Positives = 72/119 (60%)
Frame = +2 / -2
Query: 386 HTKDQLTKQNARQWMLLSSPSTFHATAWSKETWRPIPDMHTPDGRYA*PCSISFEMSENS 565
+T DQLT Q LSS STFHA+A+S +T RP P+ H+P G + PCS+ S +
Sbjct: 685 YTNDQLTNMKQMQCAPLSSSSTFHASAFSYDTGRPRPETHSPLGMHVNPCSMMPGSSAHR 506
Query: 566 AFLPDSSKILSSVRSCSATRDVSNMSSPALFANVNIGFSLKEQHRTASG*CQSIFNNAS 742
FLP SS S V S SATR VS+MS P FANVN G + KEQ A *CQ +F+ S
Sbjct: 505 FFLPWSSNTFSRVMSWSATRVVSSMSRPDWFANVNTGKAFKEQQSIALA*CQRVFSTPS 329
Score = 78.0 bits (164), Expect(3) = 9e-079
Identities = 31/57 (54%), Positives = 45/57 (78%)
Frame = -3 / +3
Query: 1041 SGDASPDDCNLRSVLTIAFQFPYEMHLQDSVAAMARQYVRSVISAVQRVSMAISPSQ 871
SG + ++V+TI FQF +E HLQDSVAAMARQY+RS+I++VQR+++A+S S+
Sbjct: 24 SGPGNAASAGSKAVMTIVFQFAFESHLQDSVAAMARQYMRSIIASVQRIALALSSSR 194
Score = 57.4 bits (119), Expect(3) = 9e-079
Identities = 19/30 (63%), Positives = 23/30 (76%)
Frame = -3 / +3
Query: 831 PEAATLARWVCQSYHYHLGMELLNQSDGAG 742
PEA TLARW+CQSY +H G EL+ DG+G
Sbjct: 237 PEATTLARWICQSYRFHFGAELIKSGDGSG 326
Score = 36.8 bits (74), Expect(2) = 5e-031
Identities = 18/32 (56%), Positives = 21/32 (65%)
Frame = +2 / -2
Query: 737 ASPAPSD*LSNSIPRW***LWQTHLASVAASG 832
+ P PS L +S P+ *LWQ HLASV ASG
Sbjct: 331 SQPLPSPDLISSAPK*NL*LWQIHLASVVASG 236
>gb|CF761496.1|CF761496 DSAF1_77_A06.b1_A011 Drought-stressed after flowering Sorghum
bicolor cDNA clone DSAF1_77_A06_A011 5', mRNA sequence
Length = 503
Score = 282 bits (611), Expect(2) = 2e-078
Identities = 112/115 (97%), Positives = 115/115 (100%)
Frame = -3 / +2
Query: 729 KMLWHHPDAVLCCSFKEKPMFTFANKAGLDMLETSLVALQDLTLDKIFDESGRKALFSDI 550
KMLWHHPDAVLCCSFKEKPMFTFANKAGLDMLETSL+ALQDLTLDKIFDESGRKA+FSDI
Sbjct: 2 KMLWHHPDAVLCCSFKEKPMFTFANKAGLDMLETSLIALQDLTLDKIFDESGRKAIFSDI 181
Query: 549 SKLMEQGYAYLPSGVCMSGMGRHVSFDQAVAWKVLGEDSNIHCLAFCFVNWSFV* 385
SKLMEQGYAYLPSGVCMSGMGRHVSFDQAVAWKVLGEDSN+HCLAFCFVNWSFV*
Sbjct: 182 SKLMEQGYAYLPSGVCMSGMGRHVSFDQAVAWKVLGEDSNVHCLAFCFVNWSFV* 346
Score = 261 bits (565), Expect(2) = 2e-072
Identities = 110/115 (95%), Positives = 111/115 (96%)
Frame = +2 / -3
Query: 386 HTKDQLTKQNARQWMLLSSPSTFHATAWSKETWRPIPDMHTPDGRYA*PCSISFEMSENS 565
HTKDQLTKQNARQ LLSSPSTFHATAWSKETWRPIPDMHTPDGRYA*PCSISFE+SEN
Sbjct: 345 HTKDQLTKQNARQCTLLSSPSTFHATAWSKETWRPIPDMHTPDGRYA*PCSISFEISENI 166
Query: 566 AFLPDSSKILSSVRSCSATRDVSNMSSPALFANVNIGFSLKEQHRTASG*CQSIF 730
AFLPDSSKILSSVRSCSA RDVSNMSSPALFANVNIGFSLKEQHRTASG*CQSIF
Sbjct: 165 AFLPDSSKILSSVRSCSAIRDVSNMSSPALFANVNIGFSLKEQHRTASG*CQSIF 1
Score = 232 bits (502), Expect(2) = 5e-063
Identities = 98/123 (79%), Positives = 105/123 (85%)
Frame = -2 / +1
Query: 730 ENALASSRCCSVLLL*GETYVYVCKQGRAGHVRNISCCAARPDARQDLRRVRKESTILRH 551
ENALASSR CSVLL *GETYVY+CKQGRA HVRNIS CAARPD RQD RRVRKES ILR+
Sbjct: 1 ENALASSRRCSVLLF*GETYVYICKQGRA*HVRNISYCAARPDTRQDFRRVRKESNILRY 180
Query: 550 LETNGTGLRVPAVRRVHVRNGPPCFFRPSCSVEGARRG*QHPLPGVLLRQLVLRVTEVQP 371
L+TNGTGLR+PA+R VHVRNG PCFFRPSC VEGAR G Q LPG+LLRQLVLRVT
Sbjct: 181 LKTNGTGLRIPAIRCVHVRNGSPCFFRPSCGVEGAR*GQQRALPGILLRQLVLRVTPTCR 360
Query: 370 VGW 362
+GW
Sbjct: 361 MGW 369
Score = 200 bits (432), Expect(2) = 4e-054
Identities = 89/115 (77%), Positives = 95/115 (82%)
Frame = +1 / -2
Query: 385 SHEGPVDEAERQAVDVAILAEHLPRYSLVERNMXXXXXXXXXXRQVRVALFH*FRDV*E* 564
SHEGPVDEAE QAV VA+L EHLPR+SLVERNM QV VALFH*F D+*E
Sbjct: 346 SHEGPVDEAECQAVHVAVLTEHLPRHSLVERNMATHS*HAHT*WQVCVALFH*F*DI*EY 167
Query: 565 CFPS*LVEDLV*RQVLQRNKRCF*HVQPCLVCKRKHRFLLKGAAQNSIWMMPEHF 729
CFPS*LVE+LV* QVLQRNKRCF*HV+PCLVCK KHRFLLK AAQNS+WMMPEHF
Sbjct: 166 CFPS*LVENLV*CQVLQRNKRCF*HVKPCLVCKCKHRFLLKRAAQNSVWMMPEHF 2
Score = 192 bits (414), Expect(2) = 4e-050
Identities = 85/104 (81%), Positives = 88/104 (84%)
Frame = +3 / -1
Query: 417 PGSGCCYPRRAPSTLQLGRKKHGGPFLTCTRLTAGTRSPVPLVSRCLRIVLSFLTRRRSC 596
PGS C P RAPST QLGRKKHG PFLTCT L AG RSPVPLV R LRI+LSFLTRR+SC
Sbjct: 314 PGSARCCPHRAPSTPQLGRKKHGDPFLTCTHLMAGMRSPVPLVLRYLRILLSFLTRRKSC 135
Query: 597 LASGLAAQQEMFLTCPALPCLQT*T*VSP*RSSTEQHLDDARAF 728
L SGLAAQ EMFLTC ALPCLQ *T*VSP*+SSTEQ LDDARAF
Sbjct: 134 LVSGLAAQ*EMFLTCQALPCLQM*T*VSP*KSSTEQRLDDARAF 3
Score = 105 bits (224), Expect(3) = 5e-039
Identities = 42/65 (64%), Positives = 43/65 (66%)
Frame = -1 / +3
Query: 578 QEGKHYSQTSRN*WNRATRTCRQACACQEWAAMFLSTKL*RGRCXXXXXXXXXXXXXXXT 399
QEGK YSQ S+N*WNRAT TC Q CACQEW AMFLSTKL RGRC T
Sbjct: 153 QEGKQYSQISQN*WNRATHTCHQVCACQEWVAMFLSTKLWRGRCSVRTATCTAWHSASST 332
Query: 398 GPSCD 384
GPSCD
Sbjct: 333 GPSCD 347
Score = 73.0 bits (153), Expect(3) = 5e-039
Identities = 30/34 (88%), Positives = 30/34 (88%)
Frame = -1 / +3
Query: 728 KCSGIIQMLFCAAPLRRNLCLRLQTRQGWTC*KH 627
KCSGIIQ LFCAA LRRNLCL LQTRQG TC*KH
Sbjct: 3 KCSGIIQTLFCAALLRRNLCLHLQTRQGLTC*KH 104
Score = 33.6 bits (67), Expect(2) = 2e-072
Identities = 16/21 (76%), Positives = 18/21 (85%)
Frame = +1 / -1
Query: 271 DQFLQLVHATYAFCHS**FSI 333
+Q LQLV AT AFCHS**FS+
Sbjct: 488 NQDLQLVIAT*AFCHS**FSL 426
Score = 33.1 bits (66), Expect(2) = 4e-054
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +2 / -2
Query: 281 FN*CMQHMPFVTADDFPYK 337
+N* +QH F TADDFPY+
Sbjct: 478 YN**LQHKHFATADDFPYQ 422
Score = 32.2 bits (64), Expect(2) = 2e-078
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -1 / +1
Query: 329 ENHQL*QKAYVACTS*RNWSNCFF 258
ENHQL Q AYVA TS R+ C +
Sbjct: 430 ENHQLWQNAYVAITSCRS*FQCIY 501
Score = 30.9 bits (61), Expect(2) = 5e-063
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = -3 / +3
Query: 330 GKSSAVTKGICCMH*LKKLV 271
GKSSAV K +CC H*L L+
Sbjct: 429 GKSSAVAKCLCCNH*L*VLI 488
Score = 28.1 bits (55), Expect(2) = 4e-050
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +3 / -3
Query: 282 STSACNICLLSQLMIF 329
+TS CNI +L QLMIF
Sbjct: 477 TTSDCNISILPQLMIF 430
Score = 23.1 bits (44), Expect(3) = 5e-039
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = -2 / +2
Query: 328 KIISCDKRHMLHALV 284
KIISC K ML +LV
Sbjct: 431 KIISCGKMLMLQSLV 475
>gb|BE361697.1|BE361697 DG1_81_F02.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 661
Score = 199 bits (430), Expect(2) = 4e-061
Identities = 74/119 (62%), Positives = 99/119 (83%)
Frame = -3 / +3
Query: 741 EALLKMLWHHPDAVLCCSFKEKPMFTFANKAGLDMLETSLVALQDLTLDKIFDESGRKAL 562
E +LK LWHH A+LCCS K P+FTFAN++GLDMLET+LVALQD+TL+K+FD+ GRK L
Sbjct: 126 EGVLKTLWHHASAILCCSLKALPVFTFANQSGLDMLETTLVALQDITLEKVFDDQGRKNL 305
Query: 561 FSDISKLMEQGYAYLPSGVCMSGMGRHVSFDQAVAWKVLGEDSNIHCLAFCFVNWSFV* 385
+++ +MEQG+ +PSG+C+SG+GR VS+++A+AWKVL +DS HC+ F FVNWSFV*
Sbjct: 306 CAELPGIMEQGFTCIPSGLCVSGLGRPVSYEKALAWKVLDDDSGAHCICFMFVNWSFV* 482
Score = 119 bits (255), Expect(2) = 5e-031
Identities = 59/119 (49%), Positives = 72/119 (60%)
Frame = +2 / -1
Query: 386 HTKDQLTKQNARQWMLLSSPSTFHATAWSKETWRPIPDMHTPDGRYA*PCSISFEMSENS 565
+T DQLT Q LSS STFHA+A+S +T RP P+ H+P G + PCS+ S +
Sbjct: 481 YTNDQLTNMKQMQCAPLSSSSTFHASAFSYDTGRPRPETHSPLGMHVNPCSMMPGSSAHR 302
Query: 566 AFLPDSSKILSSVRSCSATRDVSNMSSPALFANVNIGFSLKEQHRTASG*CQSIFNNAS 742
FLP SS S V S SATR VS+MS P FANVN G + KEQ A *CQ +F+ S
Sbjct: 301 FFLPWSSNTFSRVMSWSATRVVSSMSRPDWFANVNTGKAFKEQQSIALA*CQRVFSTPS 125
Score = 57.4 bits (119), Expect(2) = 4e-061
Identities = 19/30 (63%), Positives = 23/30 (76%)
Frame = -3 / +3
Query: 831 PEAATLARWVCQSYHYHLGMELLNQSDGAG 742
PEA TLARW+CQSY +H G EL+ DG+G
Sbjct: 33 PEATTLARWICQSYRFHFGAELIKSGDGSG 122
Score = 36.8 bits (74), Expect(2) = 5e-031
Identities = 18/32 (56%), Positives = 21/32 (65%)
Frame = +2 / -1
Query: 737 ASPAPSD*LSNSIPRW***LWQTHLASVAASG 832
+ P PS L +S P+ *LWQ HLASV ASG
Sbjct: 127 SQPLPSPDLISSAPK*NL*LWQIHLASVVASG 32
>gb|BG051633.1|BG051633 FM1_59_B11.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 567
Score = 232 bits (501), Expect = 8e-060
Identities = 89/145 (61%), Positives = 114/145 (78%)
Frame = -3 / +1
Query: 819 TLARWVCQSYHYHLGMELLNQSDGAGEALLKMLWHHPDAVLCCSFKEKPMFTFANKAGLD 640
TLARW+ +SY +H G ELL +A LK LW H D+++CCS K P+FTFAN++GLD
Sbjct: 4 TLARWIGRSYRFHTGAELLRTDTQCTDASLKALWQHSDSIMCCSLKAAPVFTFANQSGLD 183
Query: 639 MLETSLVALQDLTLDKIFDESGRKALFSDISKLMEQGYAYLPSGVCMSGMGRHVSFDQAV 460
MLET+L+ALQD++L+KI D+ GRKAL ++ K+M+QG+AYLP GVC+S MGR VS++QAV
Sbjct: 184 MLETTLIALQDISLEKILDDDGRKALCTEYPKIMQQGFAYLPGGVCVSSMGRPVSYEQAV 363
Query: 459 AWKVLGEDSNIHCLAFCFVNWSFV* 385
AWKVL +D HCLAF FVNWSFV*
Sbjct: 364 AWKVLSDDDTPHCLAFMFVNWSFV* 438
Score = 128 bits (275), Expect = 1e-028
Identities = 64/120 (53%), Positives = 70/120 (58%)
Frame = +2 / -2
Query: 383 SHTKDQLTKQNARQWMLLSSPSTFHATAWSKETWRPIPDMHTPDGRYA*PCSISFEMSEN 562
SHTKDQ T ARQ + SS TFHATA S +T RPI D HTP GRYA PC I S
Sbjct: 440 SHTKDQFTNMKARQCGVSSSLRTFHATACS*DTGRPILDTHTPPGRYAKPCCIILGYSVQ 261
Query: 563 SAFLPDSSKILSSVRSCSATRDVSNMSSPALFANVNIGFSLKEQHRTASG*CQSIFNNAS 742
SAFLP SS+I S S A VS+MS P A VN G + +EQH S C S F AS
Sbjct: 260 SAFLPSSSRIFSREMSWRAINVVSSMSRPDWLAKVNTGAAFREQHMIESECCHSAFKEAS 81
>gb|BI351515.1|BI351515 IP1_72_G08.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 514
Score = 230 bits (497), Expect = 3e-059
Identities = 88/110 (80%), Positives = 102/110 (92%)
Frame = -3 / +1
Query: 714 HPDAVLCCSFKEKPMFTFANKAGLDMLETSLVALQDLTLDKIFDESGRKALFSDISKLME 535
H DAVLCCSFKEKP+FTF N+ G+DMLET+L+ALQDLTLDKIFD GRKAL +++ KLME
Sbjct: 4 HQDAVLCCSFKEKPVFTFGNQMGIDMLETTLIALQDLTLDKIFDLPGRKALHAEVPKLME 183
Query: 534 QGYAYLPSGVCMSGMGRHVSFDQAVAWKVLGEDSNIHCLAFCFVNWSFV* 385
QGYAYLP+GVC+SGMGRHVS+++AVAWKVLGED N+HCLAFCFVNWSFV*
Sbjct: 184 QGYAYLPAGVCLSGMGRHVSYEEAVAWKVLGEDGNVHCLAFCFVNWSFV* 333
Score = 170 bits (365), Expect = 5e-041
Identities = 77/107 (71%), Positives = 80/107 (74%)
Frame = +2 / -3
Query: 389 TKDQLTKQNARQWMLLSSPSTFHATAWSKETWRPIPDMHTPDGRYA*PCSISFEMSENSA 568
TKDQLTKQ ARQ L SSP TFHATA S ETWRPIPD HTP G+YA PCSISF S +A
Sbjct: 329 TKDQLTKQKARQCTLPSSPRTFHATASS*ETWRPIPDKHTPAGKYAYPCSISFGTSACNA 150
Query: 569 FLPDSSKILSSVRSCSATRDVSNMSSPALFANVNIGFSLKEQHRTAS 709
FLP SKILS VRSC A R VSNMS P VN GFSLKEQH+TAS
Sbjct: 149 FLPGRSKILSRVRSCRAIRVVSNMSIPIWLPKVNTGFSLKEQHKTAS 9
Score = 102 bits (218), Expect = 9e-021
Identities = 51/113 (45%), Positives = 70/113 (61%)
Frame = +1 / -2
Query: 379 LQSHEGPVDEAERQAVDVAILAEHLPRYSLVERNMXXXXXXXXXXRQVRVALFH*FRDV* 558
+ S+EGPVDE E +AV VAI E+ PR S + +M RQVR++LFH FR++
Sbjct: 339 IASNEGPVDETEGEAVYVAIFTENFPRNSFLIGDMAAHPRQAYPSRQVRISLFHQFRNLR 160
Query: 559 E*CFPS*LVEDLV*RQVLQRNKRCF*HVQPCLVCKRKHRFLLKGAAQNSIWMM 717
*C + V++LV ++L N CF*HV LV K KHR L+ AAQ+S+ M+
Sbjct: 159 V*CLSARQVKNLVQGEIL*SN*SCF*HVNSHLVAKSKHRLFLERAAQDSVLMI 1
>gb|BE363303.1|BE363303 WS1_61_A11.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 666
Score = 199 bits (430), Expect = 5e-050
Identities = 74/119 (62%), Positives = 99/119 (83%)
Frame = -3 / +3
Query: 741 EALLKMLWHHPDAVLCCSFKEKPMFTFANKAGLDMLETSLVALQDLTLDKIFDESGRKAL 562
E +LK LWHH A+LCCS K P+FTFAN++GLDMLET+LVALQD+TL+K+FD+ GRK L
Sbjct: 27 EGVLKTLWHHASAILCCSLKALPVFTFANQSGLDMLETTLVALQDITLEKVFDDQGRKNL 206
Query: 561 FSDISKLMEQGYAYLPSGVCMSGMGRHVSFDQAVAWKVLGEDSNIHCLAFCFVNWSFV* 385
+++ +MEQG+ +PSG+C+SG+GR VS+++A+AWKVL +DS HC+ F FVNWSFV*
Sbjct: 207 CAELPGIMEQGFTCIPSGLCVSGLGRPVSYEKALAWKVLDDDSGAHCICFMFVNWSFV* 383
Score = 119 bits (255), Expect = 7e-026
Identities = 59/119 (49%), Positives = 72/119 (60%)
Frame = +2 / -3
Query: 386 HTKDQLTKQNARQWMLLSSPSTFHATAWSKETWRPIPDMHTPDGRYA*PCSISFEMSENS 565
+T DQLT Q LSS STFHA+A+S +T RP P+ H+P G + PCS+ S +
Sbjct: 382 YTNDQLTNMKQMQCAPLSSSSTFHASAFSYDTGRPRPETHSPLGMHVNPCSMMPGSSAHR 203
Query: 566 AFLPDSSKILSSVRSCSATRDVSNMSSPALFANVNIGFSLKEQHRTASG*CQSIFNNAS 742
FLP SS S V S SATR VS+MS P FANVN G + KEQ A *CQ +F+ S
Sbjct: 202 FFLPWSSNTFSRVMSWSATRVVSSMSRPDWFANVNTGKAFKEQQSIALA*CQRVFSTPS 26
>gb|CN139927.1|CN139927 OX1_33_B02.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_33_B02_A002 3', mRNA sequence
Length = 694
Score = 194 bits (418), Expect = 2e-048
Identities = 77/151 (50%), Positives = 100/151 (66%)
Frame = -3 / +3
Query: 837 GFPEAATLARWVCQSYHYHLGMELLNQSDGAGEALLKMLWHHPDAVLCCSFKEKPMFTFA 658
G PEA LA W+ +SY H G E+ ++ L W H DA+LCCS K FA
Sbjct: 18 GSPEALALATWIGRSYRAHTGTEIRWSDTEGADSPLMPFWKHSDAILCCSLKPAFTLKFA 197
Query: 657 NKAGLDMLETSLVALQDLTLDKIFDESGRKALFSDISKLMEQGYAYLPSGVCMSGMGRHV 478
N AG D+LET+LV +QDL L+ + D+ G+KALF+ +SK+M+QG AYLP GVC S MGR
Sbjct: 198 NSAGFDILETTLVNIQDLPLEAVLDDDGQKALFAQLSKIMQQGLAYLPGGVCRSSMGRQA 377
Query: 477 SFDQAVAWKVLGEDSNIHCLAFCFVNWSFV* 385
S++QAVAWKV+G+D CLA VNW+F+*
Sbjct: 378 SYEQAVAWKVVGDDGAPQCLALMLVNWTFI* 470
Score = 112 bits (239), Expect = 1e-023
Identities = 54/106 (50%), Positives = 65/106 (61%)
Frame = +2 / -1
Query: 392 KDQLTKQNARQWMLLSSPSTFHATAWSKETWRPIPDMHTPDGRYA*PCSISFEMSENSAF 571
K QLT +AR SSP+TFHATA S + RP+ D+HTP GRYA PC + E N AF
Sbjct: 463 KVQLTSMSARH*GAPSSPTTFHATACSYDACRPMLDLHTPPGRYARPCCMILESCANRAF 284
Query: 572 LPDSSKILSSVRSCSATRDVSNMSSPALFANVNIGFSLKEQHRTAS 709
P SS+ SS RS TR VS MS PAL AN+++ +EQ AS
Sbjct: 283 WPSSSRTASSGRSWMFTRVVSRMSKPALLANLSVKAGFREQQSIAS 146
>gb|BF585867.1|BF585867 FM1_25_E03.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 510
Score = 189 bits (407), Expect = 8e-047
Identities = 72/108 (66%), Positives = 92/108 (85%)
Frame = -3 / +2
Query: 708 DAVLCCSFKEKPMFTFANKAGLDMLETSLVALQDLTLDKIFDESGRKALFSDISKLMEQG 529
D+++CCS K P+FTFAN+AGLDMLET+L+ALQD++L+KI D+ GRKAL ++ K+M+QG
Sbjct: 2 DSIMCCSLKAAPVFTFANQAGLDMLETTLIALQDISLEKILDDDGRKALCTEYPKIMQQG 181
Query: 528 YAYLPSGVCMSGMGRHVSFDQAVAWKVLGEDSNIHCLAFCFVNWSFV* 385
+AYLP GVC+S MGR VS++QAVAWKVL +D HCLAF FVNWSFV*
Sbjct: 182 FAYLPGGVCVSSMGRPVSYEQAVAWKVLSDDDTPHCLAFMFVNWSFV* 325
Score = 122 bits (261), Expect = 1e-026
Identities = 60/109 (55%), Positives = 66/109 (60%)
Frame = +2 / -1
Query: 383 SHTKDQLTKQNARQWMLLSSPSTFHATAWSKETWRPIPDMHTPDGRYA*PCSISFEMSEN 562
SHTKDQ T ARQ + SS TFHATA S +T RPI D HTP GRYA PC I S
Sbjct: 327 SHTKDQFTNMKARQCGVSSSLRTFHATACS*DTGRPILDTHTPPGRYAKPCCIILGYSVQ 148
Query: 563 SAFLPDSSKILSSVRSCSATRDVSNMSSPALFANVNIGFSLKEQHRTAS 709
SAFLP SS+I S S A VS+MS PA A VN G + +EQH S
Sbjct: 147 SAFLPSSSRIFSREMSWRAINVVSSMSRPAWLAKVNTGAAFREQHMIES 1
>gb|BF588277.1|BF588277 FM1_39_G09.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 474
Score = 179 bits (385), Expect = 8e-044
Identities = 75/155 (48%), Positives = 102/155 (65%)
Frame = -3 / +1
Query: 924 RSVISAVQRVSMAISPSQSGLNAGHRMLSGFPEAATLARWVCQSYHYHLGMELLNQSDGA 745
R V+++VQRV+MAI+PS+ G + + G PEA LA W+ +SY H G E+
Sbjct: 10 RGVMASVQRVAMAIAPSRLGPHIELKHPPGSPEALALATWIGRSYRAHTGTEIRWSDTEG 189
Query: 744 GEALLKMLWHHPDAVLCCSFKEKPMFTFANKAGLDMLETSLVALQDLTLDKIFDESGRKA 565
++ L W H DA+LCCS K FAN AG D+LET+LV +QDL L+ + D+ G+KA
Sbjct: 190 ADSPLMPFWKHSDAILCCSLKPAFTLKFANSAGFDILETTLVNIQDLPLEAVLDDDGQKA 369
Query: 564 LFSDISKLMEQGYAYLPSGVCMSGMGRHVSFDQAV 460
LF+ +SK+M+QG AYLP GVC S MGR S++QAV
Sbjct: 370 LFAQLSKIMQQGLAYLPGGVCRSSMGRQASYEQAV 474
Score = 87.7 bits (185), Expect(2) = 5e-021
Identities = 41/83 (49%), Positives = 50/83 (60%)
Frame = +2 / -2
Query: 461 TAWSKETWRPIPDMHTPDGRYA*PCSISFEMSENSAFLPDSSKILSSVRSCSATRDVSNM 640
TA S + RP+ D+HTP GRYA PC + E N AF P SS+ SS RS TR VS M
Sbjct: 473 TACSYDACRPMLDLHTPPGRYARPCCMILESCANRAFWPSSSRTASSGRSWMFTRVVSRM 294
Query: 641 SSPALFANVNIGFSLKEQHRTAS 709
S PAL AN+++ +EQ AS
Sbjct: 293 SKPALLANLSVKAGFREQQSIAS 225
Score = 35.4 bits (71), Expect(2) = 5e-021
Identities = 20/50 (40%), Positives = 26/50 (52%)
Frame = +2 / -2
Query: 770 SIPRW***LWQTHLASVAASGKPESILCPAFRPDWEGDIAIDTLCTAEMT 919
S+P *L H+A +ASG+P P EG IA+ TLCT +T
Sbjct: 164 SVPVCAL*LLPIHVARASASGEPGGCFSSICGPRREGAIAMATLCTDAIT 15
>gb|BF481484.1|BF481484 FM1_19_G01.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 513
Score = 178 bits (383), Expect = 2e-043
Identities = 68/83 (81%), Positives = 79/83 (95%)
Frame = -3 / +2
Query: 633 ETSLVALQDLTLDKIFDESGRKALFSDISKLMEQGYAYLPSGVCMSGMGRHVSFDQAVAW 454
ET+L+ALQDLTLDKIFDE GRKAL +++ KLMEQGYAYLP+GVC+SGMGRHVS+++AVAW
Sbjct: 2 ETTLIALQDLTLDKIFDEPGRKALHAEVPKLMEQGYAYLPAGVCLSGMGRHVSYEEAVAW 181
Query: 453 KVLGEDSNIHCLAFCFVNWSFV* 385
KVLGED N+HCLAFCFVNWSFV*
Sbjct: 182 KVLGEDGNVHCLAFCFVNWSFV* 250
Score = 135 bits (289), Expect = 1e-030
Identities = 61/82 (74%), Positives = 64/82 (78%)
Frame = +2 / -1
Query: 389 TKDQLTKQNARQWMLLSSPSTFHATAWSKETWRPIPDMHTPDGRYA*PCSISFEMSENSA 568
TKDQLTKQ ARQ L SSP TFHATA S ETWRPIPD HTP G+YA*PCSI+F S +A
Sbjct: 246 TKDQLTKQKARQCTLPSSPRTFHATASS*ETWRPIPDKHTPAGKYA*PCSINFGTSACNA 67
Query: 569 FLPDSSKILSSVRSCSATRDVS 634
FLP SSKILS VRSC A R VS
Sbjct: 66 FLPGSSKILSRVRSCRAIRVVS 1
>gb|BF587717.1|BF587717 FM1_39_G09.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 490
Score = 168 bits (361), Expect = 2e-040
Identities = 65/116 (56%), Positives = 83/116 (71%)
Frame = -3 / +2
Query: 732 LKMLWHHPDAVLCCSFKEKPMFTFANKAGLDMLETSLVALQDLTLDKIFDESGRKALFSD 553
L W H DA+LCCS K FAN AG D+LET+LV +QDL L+ + D+ G+KALF+
Sbjct: 26 LMPFWKHSDAILCCSLKPAFTLKFANSAGFDILETTLVNIQDLPLEAVLDDDGQKALFAQ 205
Query: 552 ISKLMEQGYAYLPSGVCMSGMGRHVSFDQAVAWKVLGEDSNIHCLAFCFVNWSFV* 385
+SK+M+QG AYLP GVC S MGR S++QAVAWKV+G+D CLA VNW+F+*
Sbjct: 206 LSKIMQQGLAYLPGGVCRSSMGRQASYEQAVAWKVVGDDGAPQCLALMLVNWTFI* 373
Score = 113 bits (241), Expect = 6e-024
Identities = 54/106 (50%), Positives = 65/106 (61%)
Frame = +2 / -2
Query: 392 KDQLTKQNARQWMLLSSPSTFHATAWSKETWRPIPDMHTPDGRYA*PCSISFEMSENSAF 571
K QLT +AR SSP+TFHATA S + RP+ D+HTP GRYA PC + E N AF
Sbjct: 366 KVQLTSMSARHCGAPSSPTTFHATACSYDACRPMLDLHTPPGRYARPCCMILESCANRAF 187
Query: 572 LPDSSKILSSVRSCSATRDVSNMSSPALFANVNIGFSLKEQHRTAS 709
P SS+ SS RS TR VS MS PAL AN+++ +EQ AS
Sbjct: 186 WPSSSRTASSGRSWMFTRVVSRMSKPALLANLSVKAGFREQQSIAS 49
>gb|BG558719.1|BG558719 RHIZ2_59_F04.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 369
Score = 166 bits (356), Expect = 8e-040
Identities = 65/94 (69%), Positives = 81/94 (86%)
Frame = -3 / +2
Query: 666 TFANKAGLDMLETSLVALQDLTLDKIFDESGRKALFSDISKLMEQGYAYLPSGVCMSGMG 487
TFAN+AGLDMLET+L+ALQD++L+KI D+ GRKAL ++ K+M+QG+AYLP GVC+S MG
Sbjct: 2 TFANQAGLDMLETTLIALQDISLEKILDDDGRKALCTEYPKIMQQGFAYLPGGVCVSSMG 181
Query: 486 RHVSFDQAVAWKVLGEDSNIHCLAFCFVNWSFV* 385
R VS++QAVAWKVL +D HCLAF FVNWSFV*
Sbjct: 182 RPVSYEQAVAWKVLSDDDTPHCLAFMFVNWSFV* 283
Score = 108 bits (230), Expect = 2e-022
Identities = 54/95 (56%), Positives = 58/95 (61%)
Frame = +2 / -1
Query: 383 SHTKDQLTKQNARQWMLLSSPSTFHATAWSKETWRPIPDMHTPDGRYA*PCSISFEMSEN 562
SHTKDQ T ARQ + SS TFHATA S +T RPI D HTP GRYA PC I S
Sbjct: 285 SHTKDQFTNMKARQCGVSSSLRTFHATACS*DTGRPILDTHTPPGRYAKPCCIILGYSVQ 106
Query: 563 SAFLPDSSKILSSVRSCSATRDVSNMSSPALFANV 667
SAFLP SS+I S S A VS+MS PA A V
Sbjct: 105 SAFLPSSSRIFSREMSWRAINVVSSMSRPAWLAKV 1
>gb|CD204731.1|CD204731 HS1_9_B12.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA clone
HS1_9_B12_A012 5', mRNA sequence
Length = 686
Score = 152 bits (327), Expect = 8e-036
Identities = 63/81 (77%), Positives = 63/81 (77%)
Frame = +1 / -3
Query: 946 CNAVLKVHLIRELKGDCQHRSQIAVIWRCIP*GLGCSRAHIKTRCQI*RXTXXYTIXXHI 1125
CN VLKVHLIRELKGDCQHRSQI VIWRCIP*GLGCSR HIKTRCQI*R YTI HI
Sbjct: 681 CNTVLKVHLIRELKGDCQHRSQITVIWRCIP*GLGCSRTHIKTRCQI*RPARGYTICFHI 502
Query: 1126 KXYDTXXXXNQWSIIXXXXIN 1188
K YDT NQWSII IN
Sbjct: 501 KWYDTKARRNQWSIIWKMFIN 439
Score = 150 bits (323), Expect = 3e-035
Identities = 66/81 (81%), Positives = 67/81 (82%)
Frame = -3 / +1
Query: 1188 IDXXXXDDAPLIXXXXRVIXLDVXXDGVXXGXTLDLASSLDVGSAAPQASGDASPDDCNL 1009
ID DDAPLI RVI LD+ DGV G TLDLASSLDVGSAAPQASGDASPDDCNL
Sbjct: 439 IDEHFPDDAPLISSGFRVIPLDMKTDGVASGRTLDLASSLDVGSAAPQASGDASPDDCNL 618
Query: 1008 RSVLTIAFQFPYEMHLQDSVA 946
RSVLTIAFQFPYEMHLQDSVA
Sbjct: 619 RSVLTIAFQFPYEMHLQDSVA 681
Score = 145 bits (312), Expect = 1e-033
Identities = 62/82 (75%), Positives = 65/82 (79%)
Frame = +3 / -2
Query: 945 LQRCPEGASHTGIERRLSAQISNCSHLEMHPLRLGVQQSPHQD*MPNLAXXXXIHHLXSH 1124
LQ C EGASH GIERRLSAQISN SHLEMHPLRLGVQQ+PHQD*MPNLA +HHL S+
Sbjct: 682 LQHCLEGASHKGIERRLSAQISNYSHLEMHPLRLGVQQNPHQD*MPNLASCQRLHHLFSY 503
Query: 1125 QVV*HXXXXXSMEHHLXXXHQL 1190
QVV*H SMEHHL HQL
Sbjct: 502 QVV*HESQKKSMEHHLENVHQL 437
Score = 141 bits (303), Expect = 2e-032
Identities = 67/83 (80%), Positives = 67/83 (80%)
Frame = +2 / -1
Query: 941 IAATLS*RCISYGN*KAIVSTDLKLQSSGDASPEAWGAAEPTSRLDAKSSVXPXXTPSXF 1120
I ATLS*RCIS GN*KAIVSTDLKLQSSGDASPEAWGAAEPTSRLDAKSSV P TPS F
Sbjct: 686 IVATLS*RCIS*GN*KAIVSTDLKLQSSGDASPEAWGAAEPTSRLDAKSSVLPEATPSVF 507
Query: 1121 TSSXMTRXXXXINGASSXXXXSI 1189
SS MTR INGASS SI
Sbjct: 506 ISSGMTRKPEEINGASSGKCSSI 438
Score = 140 bits (300), Expect = 4e-032
Identities = 62/82 (75%), Positives = 64/82 (78%)
Frame = -2 / +3
Query: 1189 N*XXXXR*CSIDXXXLSCHTT*CEXRWCXXXXXARFGI*S*CGLCCTPSLRGCISR*LQF 1010
N* R*CSID LSCHTT* E RWC ARFGI*S*CG CCTPSLRGCISR*L F
Sbjct: 438 N**TFSR*CSIDFFWLSCHTT*YENRWCSLWQDARFGI*S*CGFCCTPSLRGCISR*L*F 617
Query: 1009 EICADNRLSIPV*DAPSGQRCS 944
EICADNRLSIP+*DAPS Q C+
Sbjct: 618 EICADNRLSIPL*DAPSRQCCN 683
Score = 138 bits (296), Expect = 2e-031
Identities = 61/82 (74%), Positives = 63/82 (76%)
Frame = -1 / +2
Query: 1190 QLMXXXQMMLH*XXXXXVSYXLM*XQMVYXXVXR*IWHLVLMWALLHPKPQGMHLQMTAI 1011
QLM QMMLH* VSY L+* QMV R*IWHLVLMW LLHPKPQGMHLQMT I
Sbjct: 437 QLMNIFQMMLH*FLLAFVSYHLI*KQMV*PLAGR*IWHLVLMWVLLHPKPQGMHLQMTVI 616
Query: 1010 *DLC*QSPFNSRMRCTFRTALQ 945
*DLC*QSPFNS MRCTF+T LQ
Sbjct: 617 *DLC*QSPFNSLMRCTFKTVLQ 682
>gb|CD429244.1|CD429244 ETH1_3_A10.b1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_3_A10_A002 3', mRNA sequence
Length = 560
Score = 143 bits (307), Expect = 5e-033
Identities = 55/93 (59%), Positives = 72/93 (77%)
Frame = -3 / +2
Query: 663 FANKAGLDMLETSLVALQDLTLDKIFDESGRKALFSDISKLMEQGYAYLPSGVCMSGMGR 484
FAN AG D+LET+LV +QDL L+ + D+ G+KALF+ +SK+M+QG AYLP GVC S MGR
Sbjct: 23 FANSAGFDILETTLVNIQDLPLEAVLDDDGQKALFAQLSKIMQQGLAYLPGGVCRSSMGR 202
Query: 483 HVSFDQAVAWKVLGEDSNIHCLAFCFVNWSFV* 385
S++QAVAWKV+G+D CLA VNW+F+*
Sbjct: 203 QASYEQAVAWKVVGDDGAPQCLALMLVNWTFI* 301
Score = 105 bits (225), Expect = 1e-021
Identities = 50/94 (53%), Positives = 60/94 (63%)
Frame = +2 / -3
Query: 392 KDQLTKQNARQWMLLSSPSTFHATAWSKETWRPIPDMHTPDGRYA*PCSISFEMSENSAF 571
K QLT +AR SSP+TFHATA S + RP+ D+HTP GRYA PC + E N AF
Sbjct: 294 KVQLTSMSARH*GAPSSPTTFHATACSYDACRPMLDLHTPPGRYARPCCMILESCANRAF 115
Query: 572 LPDSSKILSSVRSCSATRDVSNMSSPALFANVNI 673
P SS+ SS RS TR VS MS PAL AN+++
Sbjct: 114 WPSSSRTASSGRSWMFTRVVSRMSKPALLANLSV 13
>gb|CL152854.1|CL152854 104_336_10780290_114_31365_306 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10780290, DNA
sequence
Length = 772
Score = 127 bits (273), Expect(2) = 4e-032
Identities = 50/55 (90%), Positives = 52/55 (94%)
Frame = -3 / +2
Query: 549 SKLMEQGYAYLPSGVCMSGMGRHVSFDQAVAWKVLGEDSNIHCLAFCFVNWSFV* 385
S L+ GYAYLPSGVCMSGMGRHVSFDQAVAWKVLGEDSN+HCLAFCFVNWSFV*
Sbjct: 83 SSLLF*GYAYLPSGVCMSGMGRHVSFDQAVAWKVLGEDSNVHCLAFCFVNWSFV* 247
Score = 119 bits (255), Expect(3) = 1e-031
Identities = 47/49 (95%), Positives = 47/49 (95%)
Frame = +2 / -2
Query: 386 HTKDQLTKQNARQWMLLSSPSTFHATAWSKETWRPIPDMHTPDGRYA*P 532
HTKDQLTKQNARQ LLSSPSTFHATAWSKETWRPIPDMHTPDGRYA*P
Sbjct: 246 HTKDQLTKQNARQCTLLSSPSTFHATAWSKETWRPIPDMHTPDGRYA*P 100
Score = 104 bits (221), Expect(2) = 1e-024
Identities = 42/57 (73%), Positives = 46/57 (80%)
Frame = -2 / +1
Query: 532 GLRVPAVRRVHVRNGPPCFFRPSCSVEGARRG*QHPLPGVLLRQLVLRVTEVQPVGW 362
GLR+PA+R VHVRNG PCFFRPSC VEGAR G Q LPG+LLRQLVLRVT +GW
Sbjct: 100 GLRIPAIRCVHVRNGSPCFFRPSCGVEGAR*GQQRALPGILLRQLVLRVTPTCRMGW 270
Score = 33.6 bits (67), Expect(3) = 1e-031
Identities = 16/21 (76%), Positives = 18/21 (85%)
Frame = +1 / -3
Query: 271 DQFLQLVHATYAFCHS**FSI 333
+Q LQLV AT AFCHS**FS+
Sbjct: 389 NQDLQLVIAT*AFCHS**FSL 327
Score = 32.2 bits (64), Expect(2) = 4e-032
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -1 / +1
Query: 329 ENHQL*QKAYVACTS*RNWSNCFF 258
ENHQL Q AYVA TS R+ C +
Sbjct: 331 ENHQLWQNAYVAITSCRS*FQCIY 402
Score = 30.9 bits (61), Expect(2) = 1e-024
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = -3 / +3
Query: 330 GKSSAVTKGICCMH*LKKLV 271
GKSSAV K +CC H*L L+
Sbjct: 330 GKSSAVAKCLCCNH*L*VLI 389
Score = 23.5 bits (45), Expect(3) = 1e-031
Identities = 7/11 (63%), Positives = 8/11 (72%)
Frame = +1 / -1
Query: 229 LATSEWNDRPK 261
L + EWND PK
Sbjct: 550 LTSDEWNDEPK 518
>gb|BF587758.1|BF587758 FM1_33_B08.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 367
Score = 87.2 bits (184), Expect(2) = 1e-031
Identities = 32/46 (69%), Positives = 37/46 (80%)
Frame = -3 / +3
Query: 534 QGYAYLPSGVCMSGMGRHVSFDQAVAWKVLGEDSNIHCLAFCFVNW 397
QG+AYLP GVC+S MGR VS++QAVAWKVL +D HCLAF FV W
Sbjct: 228 QGFAYLPGGVCVSSMGRPVSYEQAVAWKVLSDDDTPHCLAFMFVKW 365
Score = 71.6 bits (150), Expect(2) = 1e-031
Identities = 28/44 (63%), Positives = 39/44 (88%)
Frame = -3 / +1
Query: 663 FANKAGLDMLETSLVALQDLTLDKIFDESGRKALFSDISKLMEQ 532
FAN+AGLDMLET+L+ALQD++L+KI D+ GRKAL ++ K+M+Q
Sbjct: 1 FANQAGLDMLETTLIALQDISLEKILDDDGRKALCTEYLKIMQQ 132
>gb|BZ349363.1|BZ349363 hq90g06.g1 WGS-SbicolorF (JM107 adapted methyl filtered) Sorghum
bicolor genomic clone hq90g06 5', DNA sequence
Length = 488
Score = 76.7 bits (161), Expect(3) = 8e-023
Identities = 29/48 (60%), Positives = 41/48 (85%)
Frame = -3 / +3
Query: 675 PMFTFANKAGLDMLETSLVALQDLTLDKIFDESGRKALFSDISKLMEQ 532
P+FTFAN+AGLDMLET+ +AL D++L+KI D+ GRKAL ++ K+M+Q
Sbjct: 216 PVFTFANQAGLDMLETTFIALHDISLEKILDDDGRKALCTEYPKIMQQ 359
Score = 41.8 bits (85), Expect(3) = 8e-023
Identities = 15/32 (46%), Positives = 19/32 (59%)
Frame = -3 / +3
Query: 777 GMELLNQSDGAGEALLKMLWHHPDAVLCCSFK 682
G ELL +A LK LW H D+++CCS K
Sbjct: 27 GAELLRTDTQCTDASLKALWQHSDSIMCCSLK 122
Score = 28.1 bits (55), Expect(3) = 8e-023
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = -3 / +1
Query: 531 GYAYLPSGVCMS 496
G+AYLP GVC+S
Sbjct: 448 GFAYLPGGVCVS 483
>gb|BF481329.1|BF481329 FM1_18_F06.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 423
Score = 107 bits (229), Expect = 3e-022
Identities = 40/67 (59%), Positives = 52/67 (77%)
Frame = -3 / +2
Query: 585 DESGRKALFSDISKLMEQGYAYLPSGVCMSGMGRHVSFDQAVAWKVLGEDSNIHCLAFCF 406
D+ G+KALF+ +SK+M+QG AYLP GVC S MGR S++QAVAWKV+G+D CLA
Sbjct: 2 DDDGQKALFAQLSKIMQQGLAYLPGGVCRSSMGRQASYEQAVAWKVVGDDGAPQCLALML 181
Query: 405 VNWSFV* 385
VNW+F+*
Sbjct: 182 VNWTFI* 202
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,576,166,355
Number of Sequences: 832831
Number of extensions: 25393868
Number of successful extensions: 130012
Number of sequences better than 1.0e-020: 20
length of database: 163,786,556
effective HSP length: 55
effective length of database: 117,980,851
effective search space used: 40231470191
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)