TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2448569.2.1
(758 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CW301137.1|CW301137 104_784_11464043_116_36253_034 Sorgh... 170 1e-078
gb|CW063398.1|CW063398 104_309_10521981_114_30134 Sorghum m... 165 4e-077
gb|CN139961.1|CN139961 OX1_33_E06.b1_A002 Oxidatively-stres... 164 5e-077
gb|BZ779779.1|BZ779779 ii34e07.g1 WGS-SbicolorF (DH5a methy... 170 1e-070
gb|CX609326.1|CX609326 ANR1_12_B05.b1_A002 Anaerobic roots ... 161 2e-067
gb|CX609201.1|CX609201 ANR1_11_F09.b1_A002 Anaerobic roots ... 161 2e-067
gb|CX616461.1|CX616461 GABR1_28_C04.b1_A002 GA- or brassino... 138 3e-067
gb|CN143916.1|CN143916 WOUND1_19_D07.b1_A002 Wounded leaves... 161 2e-066
gb|CN131128.1|CN131128 RHOH1_46_C04.b1_A002 Acid- and alkal... 158 2e-066
gb|CW299073.1|CW299073 104_781_11462920_148_35657_050 Sorgh... 161 3e-065
gb|AW922831.1|AW922831 DG1_46_D12.g1_A002 Dark Grown 1 (DG1... 122 7e-065
gb|CN151725.1|CN151725 WOUND1_77_E10.b1_A002 Wounded leaves... 146 5e-063
gb|CW451375.1|CW451375 fsbb001f191g19f0 Sorghum methylation... 170 3e-062
gb|BG102496.1|BG102496 RHIZ2_33_G06.g1_A003 Rhizome2 (RHIZ2... 119 3e-062
gb|BG557261.1|BG557261 EM1_44_F08.g1_A002 Embryo 1 (EM1) So... 118 3e-061
gb|CF427951.1|CF427951 PH1_11_F08.g1_A002 Phosphorous-defic... 138 1e-060
gb|BE355210.1|BE355210 DG1_10_F11.g1_A002 Dark Grown 1 (DG1... 132 8e-059
gb|CD428029.1|CD428029 ETH1_32_H05.b1_A002 Ethylene-treated... 134 2e-058
gb|BZ779778.1|BZ779778 ii34e07.b1 WGS-SbicolorF (DH5a methy... 118 6e-058
gb|CF429943.1|CF429943 PH1_25_F09.b1_A002 Phosphorous-defic... 126 7e-057
gb|CF428894.1|CF428894 PH1_18_D09.b1_A002 Phosphorous-defic... 118 2e-056
gb|AW286181.1|AW286181 LG1_328_E01.g1_A002 Light Grown 1 (L... 132 1e-055
gb|BG465900.1|BG465900 RHIZ2_46_A05.g1_A003 Rhizome2 (RHIZ2... 130 3e-055
gb|BG559972.1|BG559972 RHIZ2_75_H09.g1_A003 Rhizome2 (RHIZ2... 122 6e-053
gb|BE359944.1|BE359944 DG1_58_G02.g2_A002 Dark Grown 1 (DG1... 118 2e-052
gb|CW466352.1|CW466352 fsbb001f217i24f0 Sorghum methylation... 115 4e-049
gb|CW289115.1|CW289115 104_767_11412305_148_35537_065 Sorgh... 109 3e-048
gb|BE361720.1|BE361720 DG1_81_C01.g1_A002 Dark Grown 1 (DG1... 106 4e-048
gb|CD236019.1|CD236019 SS1_25_C10.b1_A012 Salt-stressed see... 105 1e-047
gb|CN140043.1|CN140043 OX1_33_E06.g1_A002 Oxidatively-stres... 170 1e-045
gb|CW120757.1|CW120757 104_498_11109515_148_34653_042 Sorgh... 119 5e-045
gb|CF771208.1|CF771208 DSBF1_15_F05.g1_A010 Drought-stresse... 106 8e-043
gb|AW924499.1|AW924499 WS1_70_C10.b1_A002 Water-stressed 1 ... 106 5e-042
gb|CW306937.1|CW306937 104_792_11467109_116_35709_017 Sorgh... 170 3e-041
gb|CX616545.1|CX616545 GABR1_28_C04.g1_A002 GA- or brassino... 167 2e-040
gb|CN144004.1|CN144004 WOUND1_19_D07.g1_A002 Wounded leaves... 161 1e-038
gb|CX609287.1|CX609287 ANR1_11_F09.g1_A002 Anaerobic roots ... 161 1e-038
gb|CX609406.1|CX609406 ANR1_12_B05.g1_A002 Anaerobic roots ... 161 1e-038
gb|CW299072.1|CW299072 104_781_11462920_116_35661_050 Sorgh... 158 8e-038
gb|CW415288.1|CW415288 fsbb001f115f07f0 Sorghum methylation... 158 8e-038
gb|CN131212.1|CN131212 RHOH1_46_C04.g1_A002 Acid- and alkal... 158 1e-037
gb|BF422202.1|BF422202 FM1_13_B11.g1_A003 Floral-Induced Me... 93 1e-037
gb|AW564403.1|AW564403 LG1_292_B12.b1_A002 Light Grown 1 (L... 154 1e-036
gb|CD226629.1|CD226629 CCC1_47_H10.b1_A007 Callus culture/c... 90 3e-036
gb|CL148238.1|CL148238 104_328_10592951_116_31783_075 Sorgh... 151 1e-035
gb|BG558625.1|BG558625 RHIZ2_58_C08.g1_A003 Rhizome2 (RHIZ2... 119 2e-034
gb|BG356869.1|BG356869 OV2_11_A05.g1_A002 Ovary 2 (OV2) Sor... 132 3e-034
gb|CW301138.1|CW301138 104_784_11464043_148_36254_034 Sorgh... 118 9e-034
gb|CW451376.1|CW451376 fsbb001f191g19k0 Sorghum methylation... 118 1e-033
gb|AW924610.1|AW924610 WS1_70_C10.g1_A002 Water-stressed 1 ... 106 2e-033
gb|CF429486.1|CF429486 PH1_22_C12.b1_A002 Phosphorous-defic... 112 2e-033
gb|CF431009.1|CF431009 NIT1_4_H09.b1_A002 Nitrogen-deficien... 118 1e-032
gb|CN146426.1|CN146426 WOUND1_41_D07.b1_A002 Wounded leaves... 72 2e-032
gb|BG605826.1|BG605826 RHIZ2_81_H11.g1_A003 Rhizome2 (RHIZ2... 72 2e-032
gb|CX618502.1|CX618502 GABR1_40_B04.b1_A002 GA- or brassino... 72 2e-032
gb|CW111253.1|CW111253 104_484_11104205_148_34527_023 Sorgh... 72 2e-032
gb|BE356755.1|BE356755 DG1_12_C08.g1_A002 Dark Grown 1 (DG1... 72 2e-032
gb|CW368566.1|CW368566 fsbb001f042j11k0 Sorghum methylation... 72 1e-031
gb|CN131344.1|CN131344 RHOH1_47_H10.b1_A002 Acid- and alkal... 68 7e-031
gb|CF429999.1|CF429999 PH1_25_F09.g1_A002 Phosphorous-defic... 92 8e-031
gb|CF428925.1|CF428925 PH1_18_D09.g1_A002 Phosphorous-defic... 89 2e-030
gb|CW218469.1|CW218469 104_652_11196207_116_37528_062 Sorgh... 72 1e-029
gb|CF760782.1|CF760782 DSAF1_66_E10.b1_A011 Drought-stresse... 106 3e-027
gb|CF432176.1|CF432176 NIT1_14_A05.g1_A002 Nitrogen-deficie... 109 6e-027
gb|CX610800.1|CX610800 ANR1_20_H05.g1_A002 Anaerobic roots ... 120 2e-026
gb|BE352864.1|BE352864 LG1_267_G10.g1_A002 Light Grown 1 (L... 73 9e-026
gb|AW285132.1|AW285132 LG1_206_E11.g1_A002 Light Grown 1 (L... 72 2e-025
gb|CD235852.1|CD235852 SS1_24_D08.b1_A012 Salt-stressed see... 72 2e-025
gb|AW282975.1|AW282975 LG1_206_D03.g1_A002 Light Grown 1 (L... 72 2e-025
gb|CD236573.1|CD236573 SS1_35_F07.b1_A012 Salt-stressed see... 72 2e-025
gb|BE352863.1|BE352863 LG1_267_G09.g1_A002 Light Grown 1 (L... 72 3e-025
gb|CF428603.1|CF428603 PH1_9_D02.b1_A002 Phosphorous-defici... 109 8e-025
gb|BG103002.1|BG103002 RHIZ2_35_H06.b1_A003 Rhizome2 (RHIZ2... 63 4e-024
gb|CD224909.1|CD224909 CCC1_37_A05.b1_A007 Callus culture/c... 68 1e-023
gb|BE355488.1|BE355488 DG1_114_G02.g1_A002 Dark Grown 1 (DG... 68 1e-023
gb|BG605888.1|BG605888 RHIZ2_82_G10.g1_A003 Rhizome2 (RHIZ2... 68 1e-023
gb|BE361712.1|BE361712 DG1_81_C11.g1_A002 Dark Grown 1 (DG1... 68 1e-023
gb|BE356504.1|BE356504 DG1_125_G03.g1_A002 Dark Grown 1 (DG... 68 1e-023
gb|BE356481.1|BE356481 DG1_125_C07.g1_A002 Dark Grown 1 (DG... 68 1e-023
gb|AW678398.1|AW678398 WS1_15_E05.g1_A002 Water-stressed 1 ... 68 1e-023
gb|CX621250.1|CX621250 GABR1_57_A12.b1_A002 GA- or brassino... 68 1e-023
gb|BE363177.1|BE363177 DG1_9_H02.g1_A002 Dark Grown 1 (DG1)... 68 1e-023
gb|CL181053.1|CL181053 104_391_10896478_148_31927_238 Sorgh... 68 3e-023
gb|BE918392.1|BE918392 OV1_3_A07.g1_A002 Ovary 1 (OV1) Sorg... 66 5e-023
gb|CL177480.1|CL177480 104_384_10893857_148_31915_305 Sorgh... 72 6e-023
gb|AW676674.1|AW676674 DG1_13_H08.g1_A002 Dark Grown 1 (DG1... 65 9e-023
gb|CL157536.1|CL157536 104_345_10783651_114_31477_211 Sorgh... 64 3e-022
gb|CN139453.1|CN139453 OX1_22_E01.b1_A002 Oxidatively-stres... 64 3e-022
gb|AW672235.1|AW672235 LG1_358_E01.b1_A002 Light Grown 1 (L... 64 3e-022
gb|AW282744.1|AW282744 LG1_292_B12.g1_A002 Light Grown 1 (L... 106 4e-022
gb|AI724073.1|AI724073 RHIZ1_26_F10.y1_A001 Rhizome1 (RHIZ1... 106 4e-022
gb|BE917851.1|BE917851 OV1_7_H07.g1_A002 Ovary 1 (OV1) Sorg... 106 4e-022
gb|CW257134.1|CW257134 104_722_11227174_116_35151_087 Sorgh... 105 6e-022
gb|BM317458.1|BM317458 LG1_261_B10.g9_A002 Light Grown 1 (L... 104 2e-021
gb|DN552493.1|DN552493 pSHR-RT-A-H1_C07_C085 pSHR Sorghum h... 68 3e-021
gb|BG355958.2|BG355958 EM1_18_F11.g1_A002 Embryo 1 (EM1) So... 66 5e-021
gb|AW680192.1|AW680192 WS1_4_C09.g1_A002 Water-stressed 1 (... 68 1e-020
>gb|CW301137.1|CW301137 104_784_11464043_116_36253_034 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11464043, DNA
sequence
Length = 655
Score = 170 bits (365), Expect(4) = 1e-078
Identities = 65/73 (89%), Positives = 70/73 (95%)
Frame = -2 / +1
Query: 736 HTYTIIWNPTSILFKVDDLFIRSFKRYADLPYPSSRPMTLHATLWDGSYWATEKGRVGID 557
HTYTIIWNPT+ILFKVD+LFIRSFKRYADL YPSS+PMTLHATLWDGSYWATEKG++ ID
Sbjct: 28 HTYTIIWNPTNILFKVDNLFIRSFKRYADLAYPSSKPMTLHATLWDGSYWATEKGKMPID 207
Query: 556 WSDAPFVVSYRSY 518
WS APFVVSYRSY
Sbjct: 208 WSGAPFVVSYRSY 246
Score = 133 bits (286), Expect(3) = 4e-062
Identities = 64/78 (82%), Positives = 65/78 (83%)
Frame = +3 / -3
Query: 501 TQXXXXXXR*ETTKGASDQSMPTLPFSVAQ*LPSHSVACSVMGLELGYGRSA*RLKERMK 680
TQ R*ETTKGA DQSM LPFSVAQ*LPSHSVACSVMGLELG RSA*RLK+RMK
Sbjct: 263 TQALAA*LR*ETTKGAPDQSMGILPFSVAQ*LPSHSVACSVMGLELG*ARSA*RLKDRMK 84
Query: 681 RSSTLNRMLVGFQMMV*V 734
R STLNRM VGFQMMV*V
Sbjct: 83 RLSTLNRMFVGFQMMV*V 30
Score = 118 bits (252), Expect(4) = 1e-078
Identities = 41/45 (91%), Positives = 45/45 (100%)
Frame = -2 / +1
Query: 463 WMNRQLDSAEWGTVRWAERNFMRYNYCQDGWRFPQGLPAECARH* 329
WM+RQLD+AEWGTVRWAE+NFMRYNYCQDGWRFPQGLPAEC+RH*
Sbjct: 298 WMHRQLDNAEWGTVRWAEKNFMRYNYCQDGWRFPQGLPAECSRH* 432
Score = 111 bits (238), Expect(3) = 5e-054
Identities = 51/63 (80%), Positives = 51/63 (80%)
Frame = +2 / -2
Query: 554 PVDADPALLGGPVAAVPQRGVQRHGPGARVRQVGVALEGADEEVVDLEQDAGRVPDDGVG 733
PVD ALL PVAAVPQRGVQRHG GARV QVGVALEG DEEVV LEQD RVPDDGVG
Sbjct: 210 PVDGHLALLRRPVAAVPQRGVQRHGLGARVGQVGVALEGPDEEVVHLEQDVRRVPDDGVG 31
Query: 734 VCV 742
V V
Sbjct: 30 VVV 22
Score = 100 bits (212), Expect(3) = 4e-062
Identities = 40/45 (88%), Positives = 41/45 (91%)
Frame = +3 / -3
Query: 327 YQWRAHSAGSPCGNLHPSWQ*L*RMKLRSAHLTVPHSALSSCLFI 461
+QWR HSAGSPCGNLHPSWQ*L*RMK SAHLTVPHSALSSCL I
Sbjct: 434 HQWRLHSAGSPCGNLHPSWQ*L*RMKFFSAHLTVPHSALSSCLCI 300
Score = 96.4 bits (204), Expect(3) = 5e-054
Identities = 40/44 (90%), Positives = 41/44 (93%)
Frame = +2 / -2
Query: 329 SVAGALGGESLREPPPILAVVVAHEVALRPPDGAPLGAVKLPVH 460
SVA ALGGESLREPPPILAVVVAHEV LRPPDGAPLG V+LPVH
Sbjct: 432 SVAAALGGESLREPPPILAVVVAHEVLLRPPDGAPLGVVELPVH 301
Score = 86.3 bits (182), Expect(5) = 9e-042
Identities = 35/42 (83%), Positives = 38/42 (90%)
Frame = -1 / +3
Query: 698 VQGRRPLHPLLQALRRPAVPELQAHDAARHAVGRQLLGHREG 573
VQG +PLHP+LQALRRP +PELQAHDAARHAVGRQLLG EG
Sbjct: 66 VQGGQPLHPVLQALRRPGLPELQAHDAARHAVGRQLLGDGEG 191
Score = 64.8 bits (135), Expect(5) = 9e-042
Identities = 26/30 (86%), Positives = 27/30 (90%)
Frame = -1 / +3
Query: 464 VDEQAA*QRRVGHRQVGGAQLHALQLLPGW 375
VD QAA QRRVGHRQVGG +LHALQLLPGW
Sbjct: 297 VDAQAARQRRVGHRQVGGEELHALQLLPGW 386
Score = 45.5 bits (93), Expect(4) = 1e-078
Identities = 18/22 (81%), Positives = 18/22 (81%)
Frame = -1 / +2
Query: 287 FFFYGYMILALLCGFVIKKQPC 222
F F GYMIL LLC FVIKKQPC
Sbjct: 506 FRFLGYMILILLCEFVIKKQPC 571
Score = 44.6 bits (91), Expect(3) = 4e-062
Identities = 19/36 (52%), Positives = 24/36 (66%)
Frame = +2 / -3
Query: 203 RPHVASCRAAF*SQIHKEEQESYTRRKKKNTQQNKE 310
+P CRAAF*SQIHK E ESYT+ + N N++
Sbjct: 590 QPPTRFCRAAF*SQIHKVE*ESYTQENETNAINNEQ 483
Score = 43.2 bits (88), Expect(3) = 5e-054
Identities = 17/24 (70%), Positives = 19/24 (79%)
Frame = +1 / -2
Query: 220 LQGCFLITNPQRRARIIYP*KKKE 291
LQGCFLITN Q R RIIYP K+ +
Sbjct: 573 LQGCFLITNSQSRIRIIYPRKRNQ 502
Score = 40.9 bits (83), Expect(5) = 9e-042
Identities = 16/17 (94%), Positives = 16/17 (94%)
Frame = -3 / +2
Query: 378 MGGGSRKDSPPSAPATD 328
MGGGSRKDSPPSA ATD
Sbjct: 383 MGGGSRKDSPPSAAATD 433
Score = 33.6 bits (67), Expect(5) = 9e-042
Identities = 16/21 (76%), Positives = 17/21 (80%)
Frame = -3 / +1
Query: 282 FLRVYDSCSSLWICD*KAALQ 220
F VYDS S+L ICD*KAALQ
Sbjct: 511 FSWVYDSYSTL*ICD*KAALQ 573
Score = 21.7 bits (41), Expect(4) = 1e-078
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -2 / +3
Query: 160 FYRAFGY 140
FYRAFGY
Sbjct: 630 FYRAFGY 650
Score = 21.7 bits (41), Expect(5) = 9e-042
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -3 / +2
Query: 741 THTPTPSSG 715
T TPTPSSG
Sbjct: 23 TTTPTPSSG 49
>gb|CW063398.1|CW063398 104_309_10521981_114_30134 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10521981, DNA
sequence
Length = 654
Score = 165 bits (354), Expect(3) = 4e-077
Identities = 64/74 (86%), Positives = 69/74 (93%)
Frame = -2 / -1
Query: 739 THTYTIIWNPTSILFKVDDLFIRSFKRYADLPYPSSRPMTLHATLWDGSYWATEKGRVGI 560
T YTIIWNPT+ILFKVD+LFIRSFKRYADL YPSS+PMTLHATLWDGSYWATEKG++ I
Sbjct: 603 TTPYTIIWNPTNILFKVDNLFIRSFKRYADLAYPSSKPMTLHATLWDGSYWATEKGKMPI 424
Query: 559 DWSDAPFVVSYRSY 518
DWS APFVVSYRSY
Sbjct: 423 DWSGAPFVVSYRSY 382
Score = 132 bits (282), Expect(3) = 2e-061
Identities = 63/77 (81%), Positives = 64/77 (83%)
Frame = +3 / +2
Query: 501 TQXXXXXXR*ETTKGASDQSMPTLPFSVAQ*LPSHSVACSVMGLELGYGRSA*RLKERMK 680
TQ R*ETTKGA DQSM LPFSVAQ*LPSHSVACSVMGLELG RSA*RLK+RMK
Sbjct: 365 TQALAA*LR*ETTKGAPDQSMGILPFSVAQ*LPSHSVACSVMGLELG*ARSA*RLKDRMK 544
Query: 681 RSSTLNRMLVGFQMMV* 731
R STLNRM VGFQMMV*
Sbjct: 545 RLSTLNRMFVGFQMMV* 595
Score = 118 bits (252), Expect(3) = 4e-077
Identities = 41/45 (91%), Positives = 45/45 (100%)
Frame = -2 / -1
Query: 463 WMNRQLDSAEWGTVRWAERNFMRYNYCQDGWRFPQGLPAECARH* 329
WM+RQLD+AEWGTVRWAE+NFMRYNYCQDGWRFPQGLPAEC+RH*
Sbjct: 330 WMHRQLDNAEWGTVRWAEKNFMRYNYCQDGWRFPQGLPAECSRH* 196
Score = 108 bits (231), Expect(3) = 4e-053
Identities = 49/60 (81%), Positives = 49/60 (81%)
Frame = +2 / +1
Query: 554 PVDADPALLGGPVAAVPQRGVQRHGPGARVRQVGVALEGADEEVVDLEQDAGRVPDDGVG 733
PVD ALL PVAAVPQRGVQRHG GARV QVGVALEG DEEVV LEQD RVPDDGVG
Sbjct: 418 PVDGHLALLRRPVAAVPQRGVQRHGLGARVGQVGVALEGPDEEVVHLEQDVRRVPDDGVG 597
Score = 100 bits (212), Expect(3) = 2e-061
Identities = 40/45 (88%), Positives = 41/45 (91%)
Frame = +3 / +2
Query: 327 YQWRAHSAGSPCGNLHPSWQ*L*RMKLRSAHLTVPHSALSSCLFI 461
+QWR HSAGSPCGNLHPSWQ*L*RMK SAHLTVPHSALSSCL I
Sbjct: 194 HQWRLHSAGSPCGNLHPSWQ*L*RMKFFSAHLTVPHSALSSCLCI 328
Score = 96.4 bits (204), Expect(3) = 4e-053
Identities = 40/44 (90%), Positives = 41/44 (93%)
Frame = +2 / +1
Query: 329 SVAGALGGESLREPPPILAVVVAHEVALRPPDGAPLGAVKLPVH 460
SVA ALGGESLREPPPILAVVVAHEV LRPPDGAPLG V+LPVH
Sbjct: 196 SVAAALGGESLREPPPILAVVVAHEVLLRPPDGAPLGVVELPVH 327
Score = 86.3 bits (182), Expect(4) = 4e-041
Identities = 35/42 (83%), Positives = 38/42 (90%)
Frame = -1 / -3
Query: 698 VQGRRPLHPLLQALRRPAVPELQAHDAARHAVGRQLLGHREG 573
VQG +PLHP+LQALRRP +PELQAHDAARHAVGRQLLG EG
Sbjct: 562 VQGGQPLHPVLQALRRPGLPELQAHDAARHAVGRQLLGDGEG 437
Score = 64.8 bits (135), Expect(4) = 4e-041
Identities = 26/30 (86%), Positives = 27/30 (90%)
Frame = -1 / -3
Query: 464 VDEQAA*QRRVGHRQVGGAQLHALQLLPGW 375
VD QAA QRRVGHRQVGG +LHALQLLPGW
Sbjct: 331 VDAQAARQRRVGHRQVGGEELHALQLLPGW 242
Score = 45.5 bits (93), Expect(3) = 4e-077
Identities = 18/22 (81%), Positives = 18/22 (81%)
Frame = -1 / -2
Query: 287 FFFYGYMILALLCGFVIKKQPC 222
F F GYMIL LLC FVIKKQPC
Sbjct: 122 FRFLGYMILILLCEFVIKKQPC 57
Score = 44.6 bits (91), Expect(3) = 2e-061
Identities = 19/36 (52%), Positives = 24/36 (66%)
Frame = +2 / +2
Query: 203 RPHVASCRAAF*SQIHKEEQESYTRRKKKNTQQNKE 310
+P CRAAF*SQIHK E ESYT+ + N N++
Sbjct: 38 QPPTRFCRAAF*SQIHKVE*ESYTQENETNAINNEQ 145
Score = 43.2 bits (88), Expect(3) = 4e-053
Identities = 17/24 (70%), Positives = 19/24 (79%)
Frame = +1 / +1
Query: 220 LQGCFLITNPQRRARIIYP*KKKE 291
LQGCFLITN Q R RIIYP K+ +
Sbjct: 55 LQGCFLITNSQSRIRIIYPRKRNQ 126
Score = 40.9 bits (83), Expect(4) = 4e-041
Identities = 16/17 (94%), Positives = 16/17 (94%)
Frame = -3 / -2
Query: 378 MGGGSRKDSPPSAPATD 328
MGGGSRKDSPPSA ATD
Sbjct: 245 MGGGSRKDSPPSAAATD 195
Score = 33.6 bits (67), Expect(4) = 4e-041
Identities = 16/21 (76%), Positives = 17/21 (80%)
Frame = -3 / -1
Query: 282 FLRVYDSCSSLWICD*KAALQ 220
F VYDS S+L ICD*KAALQ
Sbjct: 117 FSWVYDSYSTL*ICD*KAALQ 55
>gb|CN139961.1|CN139961 OX1_33_E06.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_33_E06_A002 3', mRNA sequence
Length = 639
Score = 164 bits (352), Expect(4) = 5e-077
Identities = 63/71 (88%), Positives = 68/71 (95%)
Frame = -2 / +1
Query: 730 YTIIWNPTSILFKVDDLFIRSFKRYADLPYPSSRPMTLHATLWDGSYWATEKGRVGIDWS 551
YTIIWNPT+ILFKVD+LFIRSFKRYADL YPSS+PMTLHATLWDGSYWATEKG++ IDWS
Sbjct: 1 YTIIWNPTNILFKVDNLFIRSFKRYADLAYPSSKPMTLHATLWDGSYWATEKGKMPIDWS 180
Query: 550 DAPFVVSYRSY 518
APFVVSYRSY
Sbjct: 181 GAPFVVSYRSY 213
Score = 131 bits (281), Expect(4) = 1e-061
Identities = 62/76 (81%), Positives = 63/76 (82%)
Frame = +3 / -2
Query: 501 TQXXXXXXR*ETTKGASDQSMPTLPFSVAQ*LPSHSVACSVMGLELGYGRSA*RLKERMK 680
TQ R*ETTKGA DQSM LPFSVAQ*LPSHSVACSVMGLELG RSA*RLK+RMK
Sbjct: 230 TQALAA*LR*ETTKGAPDQSMGILPFSVAQ*LPSHSVACSVMGLELG*ARSA*RLKDRMK 51
Query: 681 RSSTLNRMLVGFQMMV 728
R STLNRM VGFQMMV
Sbjct: 50 RLSTLNRMFVGFQMMV 3
Score = 118 bits (252), Expect(4) = 5e-077
Identities = 41/45 (91%), Positives = 45/45 (100%)
Frame = -2 / +1
Query: 463 WMNRQLDSAEWGTVRWAERNFMRYNYCQDGWRFPQGLPAECARH* 329
WM+RQLD+AEWGTVRWAE+NFMRYNYCQDGWRFPQGLPAEC+RH*
Sbjct: 265 WMHRQLDNAEWGTVRWAEKNFMRYNYCQDGWRFPQGLPAECSRH* 399
Score = 103 bits (220), Expect(3) = 1e-051
Identities = 47/59 (79%), Positives = 48/59 (81%)
Frame = +2 / -1
Query: 554 PVDADPALLGGPVAAVPQRGVQRHGPGARVRQVGVALEGADEEVVDLEQDAGRVPDDGV 730
PVD ALL PVAAVPQRGVQRHG GARV QVGVALEG DEEVV LEQD RVP+DGV
Sbjct: 177 PVDGHLALLRRPVAAVPQRGVQRHGLGARVGQVGVALEGPDEEVVHLEQDVRRVPNDGV 1
Score = 100 bits (212), Expect(4) = 1e-061
Identities = 40/45 (88%), Positives = 41/45 (91%)
Frame = +3 / -2
Query: 327 YQWRAHSAGSPCGNLHPSWQ*L*RMKLRSAHLTVPHSALSSCLFI 461
+QWR HSAGSPCGNLHPSWQ*L*RMK SAHLTVPHSALSSCL I
Sbjct: 401 HQWRLHSAGSPCGNLHPSWQ*L*RMKFFSAHLTVPHSALSSCLCI 267
Score = 96.4 bits (204), Expect(3) = 1e-051
Identities = 40/44 (90%), Positives = 41/44 (93%)
Frame = +2 / -1
Query: 329 SVAGALGGESLREPPPILAVVVAHEVALRPPDGAPLGAVKLPVH 460
SVA ALGGESLREPPPILAVVVAHEV LRPPDGAPLG V+LPVH
Sbjct: 399 SVAAALGGESLREPPPILAVVVAHEVLLRPPDGAPLGVVELPVH 268
Score = 86.3 bits (182), Expect(4) = 4e-041
Identities = 35/42 (83%), Positives = 38/42 (90%)
Frame = -1 / +3
Query: 698 VQGRRPLHPLLQALRRPAVPELQAHDAARHAVGRQLLGHREG 573
VQG +PLHP+LQALRRP +PELQAHDAARHAVGRQLLG EG
Sbjct: 33 VQGGQPLHPVLQALRRPGLPELQAHDAARHAVGRQLLGDGEG 158
Score = 64.8 bits (135), Expect(4) = 4e-041
Identities = 26/30 (86%), Positives = 27/30 (90%)
Frame = -1 / +3
Query: 464 VDEQAA*QRRVGHRQVGGAQLHALQLLPGW 375
VD QAA QRRVGHRQVGG +LHALQLLPGW
Sbjct: 264 VDAQAARQRRVGHRQVGGEELHALQLLPGW 353
Score = 45.5 bits (93), Expect(4) = 5e-077
Identities = 18/22 (81%), Positives = 18/22 (81%)
Frame = -1 / +2
Query: 287 FFFYGYMILALLCGFVIKKQPC 222
F F GYMIL LLC FVIKKQPC
Sbjct: 473 FRFLGYMILILLCEFVIKKQPC 538
Score = 44.6 bits (91), Expect(4) = 1e-061
Identities = 19/36 (52%), Positives = 24/36 (66%)
Frame = +2 / -2
Query: 203 RPHVASCRAAF*SQIHKEEQESYTRRKKKNTQQNKE 310
+P CRAAF*SQIHK E ESYT+ + N N++
Sbjct: 557 QPPTRFCRAAF*SQIHKVE*ESYTQENETNAINNEQ 450
Score = 43.2 bits (88), Expect(3) = 1e-051
Identities = 17/24 (70%), Positives = 19/24 (79%)
Frame = +1 / -1
Query: 220 LQGCFLITNPQRRARIIYP*KKKE 291
LQGCFLITN Q R RIIYP K+ +
Sbjct: 540 LQGCFLITNSQSRIRIIYPRKRNQ 469
Score = 40.9 bits (83), Expect(4) = 4e-041
Identities = 16/17 (94%), Positives = 16/17 (94%)
Frame = -3 / +2
Query: 378 MGGGSRKDSPPSAPATD 328
MGGGSRKDSPPSA ATD
Sbjct: 350 MGGGSRKDSPPSAAATD 400
Score = 33.6 bits (67), Expect(4) = 4e-041
Identities = 16/21 (76%), Positives = 17/21 (80%)
Frame = -3 / +1
Query: 282 FLRVYDSCSSLWICD*KAALQ 220
F VYDS S+L ICD*KAALQ
Sbjct: 478 FSWVYDSYSTL*ICD*KAALQ 540
Score = 21.7 bits (41), Expect(4) = 5e-077
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -2 / +3
Query: 160 FYRAFGY 140
FYRAFGY
Sbjct: 597 FYRAFGY 617
Score = 21.7 bits (41), Expect(4) = 1e-061
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +1 / -1
Query: 124 YMLHACI 144
YMLHACI
Sbjct: 639 YMLHACI 619
>gb|BZ779779.1|BZ779779 ii34e07.g1 WGS-SbicolorF (DH5a methyl filtered) Sorghum bicolor
genomic clone ii34e07, DNA sequence
Length = 670
Score = 170 bits (365), Expect(2) = 1e-070
Identities = 65/73 (89%), Positives = 70/73 (95%)
Frame = -2 / +2
Query: 736 HTYTIIWNPTSILFKVDDLFIRSFKRYADLPYPSSRPMTLHATLWDGSYWATEKGRVGID 557
HTYTIIWNPT+ILFKVD+LFIRSFKRYADL YPSS+PMTLHATLWDGSYWATEKG++ ID
Sbjct: 182 HTYTIIWNPTNILFKVDNLFIRSFKRYADLAYPSSKPMTLHATLWDGSYWATEKGKMPID 361
Query: 556 WSDAPFVVSYRSY 518
WS APFVVSYRSY
Sbjct: 362 WSGAPFVVSYRSY 400
Score = 133 bits (286), Expect(2) = 2e-054
Identities = 64/78 (82%), Positives = 65/78 (83%)
Frame = +3 / -2
Query: 501 TQXXXXXXR*ETTKGASDQSMPTLPFSVAQ*LPSHSVACSVMGLELGYGRSA*RLKERMK 680
TQ R*ETTKGA DQSM LPFSVAQ*LPSHSVACSVMGLELG RSA*RLK+RMK
Sbjct: 417 TQALAA*LR*ETTKGAPDQSMGILPFSVAQ*LPSHSVACSVMGLELG*ARSA*RLKDRMK 238
Query: 681 RSSTLNRMLVGFQMMV*V 734
R STLNRM VGFQMMV*V
Sbjct: 237 RLSTLNRMFVGFQMMV*V 184
Score = 118 bits (252), Expect(2) = 1e-070
Identities = 41/45 (91%), Positives = 45/45 (100%)
Frame = -2 / +2
Query: 463 WMNRQLDSAEWGTVRWAERNFMRYNYCQDGWRFPQGLPAECARH* 329
WM+RQLD+AEWGTVRWAE+NFMRYNYCQDGWRFPQGLPAEC+RH*
Sbjct: 452 WMHRQLDNAEWGTVRWAEKNFMRYNYCQDGWRFPQGLPAECSRH* 586
Score = 111 bits (238), Expect(2) = 1e-046
Identities = 51/63 (80%), Positives = 51/63 (80%)
Frame = +2 / -1
Query: 554 PVDADPALLGGPVAAVPQRGVQRHGPGARVRQVGVALEGADEEVVDLEQDAGRVPDDGVG 733
PVD ALL PVAAVPQRGVQRHG GARV QVGVALEG DEEVV LEQD RVPDDGVG
Sbjct: 364 PVDGHLALLRRPVAAVPQRGVQRHGLGARVGQVGVALEGPDEEVVHLEQDVRRVPDDGVG 185
Query: 734 VCV 742
V V
Sbjct: 184 VVV 176
Score = 100 bits (212), Expect(2) = 2e-054
Identities = 40/45 (88%), Positives = 41/45 (91%)
Frame = +3 / -2
Query: 327 YQWRAHSAGSPCGNLHPSWQ*L*RMKLRSAHLTVPHSALSSCLFI 461
+QWR HSAGSPCGNLHPSWQ*L*RMK SAHLTVPHSALSSCL I
Sbjct: 588 HQWRLHSAGSPCGNLHPSWQ*L*RMKFFSAHLTVPHSALSSCLCI 454
Score = 96.4 bits (204), Expect(2) = 1e-046
Identities = 40/44 (90%), Positives = 41/44 (93%)
Frame = +2 / -1
Query: 329 SVAGALGGESLREPPPILAVVVAHEVALRPPDGAPLGAVKLPVH 460
SVA ALGGESLREPPPILAVVVAHEV LRPPDGAPLG V+LPVH
Sbjct: 586 SVAAALGGESLREPPPILAVVVAHEVLLRPPDGAPLGVVELPVH 455
Score = 86.3 bits (182), Expect(4) = 9e-037
Identities = 35/42 (83%), Positives = 38/42 (90%)
Frame = -1 / +1
Query: 698 VQGRRPLHPLLQALRRPAVPELQAHDAARHAVGRQLLGHREG 573
VQG +PLHP+LQALRRP +PELQAHDAARHAVGRQLLG EG
Sbjct: 220 VQGGQPLHPVLQALRRPGLPELQAHDAARHAVGRQLLGDGEG 345
Score = 64.8 bits (135), Expect(4) = 9e-037
Identities = 26/30 (86%), Positives = 27/30 (90%)
Frame = -1 / +1
Query: 464 VDEQAA*QRRVGHRQVGGAQLHALQLLPGW 375
VD QAA QRRVGHRQVGG +LHALQLLPGW
Sbjct: 451 VDAQAARQRRVGHRQVGGEELHALQLLPGW 540
Score = 40.9 bits (83), Expect(4) = 9e-037
Identities = 16/17 (94%), Positives = 16/17 (94%)
Frame = -3 / +3
Query: 378 MGGGSRKDSPPSAPATD 328
MGGGSRKDSPPSA ATD
Sbjct: 537 MGGGSRKDSPPSAAATD 587
Score = 21.7 bits (41), Expect(4) = 9e-037
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -3 / +3
Query: 741 THTPTPSSG 715
T TPTPSSG
Sbjct: 177 TTTPTPSSG 203
>gb|CX609326.1|CX609326 ANR1_12_B05.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_12_B05_A002 3', mRNA sequence
Length = 684
Score = 161 bits (346), Expect(3) = 2e-067
Identities = 62/73 (84%), Positives = 66/73 (90%)
Frame = -2 / +3
Query: 736 HTYTIIWNPTSILFKVDDLFIRSFKRYADLPYPSSRPMTLHATLWDGSYWATEKGRVGID 557
HTYTIIWNPT+ILFKVDD IR FKRYADL YPSS+PMTLHATLWDGSYWATEKG+V ID
Sbjct: 18 HTYTIIWNPTNILFKVDDNVIRVFKRYADLAYPSSKPMTLHATLWDGSYWATEKGKVPID 197
Query: 556 WSDAPFVVSYRSY 518
WS APFVVSY+ Y
Sbjct: 198 WSGAPFVVSYKGY 236
Score = 125 bits (268), Expect(2) = 8e-047
Identities = 62/78 (79%), Positives = 63/78 (80%)
Frame = +3 / -3
Query: 501 TQXXXXXXR*ETTKGASDQSMPTLPFSVAQ*LPSHSVACSVMGLELGYGRSA*RLKERMK 680
TQ *ETTKGA DQSM TLPFSVAQ*LPSHSVACSVMGLELG RSA*RLK R+
Sbjct: 253 TQASAE*PL*ETTKGAPDQSMGTLPFSVAQ*LPSHSVACSVMGLELG*ARSA*RLKTRIT 74
Query: 681 RSSTLNRMLVGFQMMV*V 734
SSTL RMLVGFQMMV*V
Sbjct: 73 LSSTLKRMLVGFQMMV*V 20
Score = 115 bits (245), Expect(2) = 7e-039
Identities = 51/63 (80%), Positives = 52/63 (82%)
Frame = +2 / -2
Query: 554 PVDADPALLGGPVAAVPQRGVQRHGPGARVRQVGVALEGADEEVVDLEQDAGRVPDDGVG 733
PVD ALLGGPVAAVPQRGVQRHG GARV QVGVALE AD VV LE+D GRVPDDGVG
Sbjct: 200 PVDGHLALLGGPVAAVPQRGVQRHGLGARVGQVGVALEDADHVVVHLEEDVGRVPDDGVG 21
Query: 734 VCV 742
V V
Sbjct: 20 VVV 12
Score = 109 bits (232), Expect(3) = 2e-067
Identities = 38/48 (79%), Positives = 43/48 (89%)
Frame = -2 / +3
Query: 463 WMNRQLDSAEWGTVRWAERNFMRYNYCQDGWRFPQGLPAECARH*YAS 320
WMN+Q DSAEWGTV+WAE N+MRYNYC DGWRFPQGLPAEC+R *+ S
Sbjct: 288 WMNKQPDSAEWGTVKWAESNYMRYNYCDDGWRFPQGLPAECSRS*FNS 431
Score = 83.1 bits (175), Expect(2) = 8e-047
Identities = 37/44 (84%), Positives = 37/44 (84%)
Frame = +3 / -3
Query: 330 QWRAHSAGSPCGNLHPSWQ*L*RMKLRSAHLTVPHSALSSCLFI 461
Q R HSAGSPCGNL PS Q*L*RM L SAHLTVPHSALS CLFI
Sbjct: 421 QLRLHSAGSPCGNLQPSSQ*L*RM*LLSAHLTVPHSALSGCLFI 290
Score = 82.2 bits (173), Expect(4) = 3e-028
Identities = 34/42 (80%), Positives = 36/42 (85%)
Frame = -1 / +2
Query: 698 VQGRRPLHPLLQALRRPAVPELQAHDAARHAVGRQLLGHREG 573
+QG R P LQALRRP +PELQAHDAARHAVGRQLLGHREG
Sbjct: 56 LQGGRQRDPRLQALRRPGLPELQAHDAARHAVGRQLLGHREG 181
Score = 67.0 bits (140), Expect(2) = 7e-039
Identities = 30/44 (68%), Positives = 34/44 (77%)
Frame = +2 / -2
Query: 329 SVAGALGGESLREPPPILAVVVAHEVALRPPDGAPLGAVKLPVH 460
S A AL + LREPP ++AVVVAH VAL P DGAPLGAV+L VH
Sbjct: 422 SAAAALRRQPLREPPAVVAVVVAHVVALGPLDGAPLGAVRLLVH 291
Score = 56.5 bits (117), Expect(4) = 3e-028
Identities = 25/27 (92%), Positives = 25/27 (92%)
Frame = -1 / +2
Query: 464 VDEQAA*QRRVGHRQVGGAQLHALQLL 384
VDEQAA*QRRVGHRQVG QLHALQLL
Sbjct: 287 VDEQAA*QRRVGHRQVGREQLHALQLL 367
Score = 25.8 bits (50), Expect(3) = 2e-067
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = -1 / +1
Query: 302 FVGYSFFFYGYMILALLCGFVIKKQPCS*QRVG 204
F+ + + +++ LL FVI+KQP S R G
Sbjct: 499 FIFAGYIYISMILVLLL*IFVIEKQPRSNARAG 597
Score = 24.0 bits (46), Expect(4) = 3e-028
Identities = 9/31 (29%), Positives = 15/31 (48%)
Frame = -3 / +3
Query: 348 PSAPATDMRPPVNSLFCWVFFFFLRVYDSCS 256
PS RP + + + ++ +YDSCS
Sbjct: 450 PSFQTQFRRPLLPKFLIYFCWIYIYIYDSCS 542
Score = 21.7 bits (41), Expect(4) = 3e-028
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -3 / +1
Query: 741 THTPTPSSG 715
T TPTPSSG
Sbjct: 13 TTTPTPSSG 39
>gb|CX609201.1|CX609201 ANR1_11_F09.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_11_F09_A002 3', mRNA sequence
Length = 665
Score = 161 bits (346), Expect(3) = 2e-067
Identities = 62/73 (84%), Positives = 66/73 (90%)
Frame = -2 / +3
Query: 736 HTYTIIWNPTSILFKVDDLFIRSFKRYADLPYPSSRPMTLHATLWDGSYWATEKGRVGID 557
HTYTIIWNPT+ILFKVDD IR FKRYADL YPSS+PMTLHATLWDGSYWATEKG+V ID
Sbjct: 3 HTYTIIWNPTNILFKVDDNVIRVFKRYADLAYPSSKPMTLHATLWDGSYWATEKGKVPID 182
Query: 556 WSDAPFVVSYRSY 518
WS APFVVSY+ Y
Sbjct: 183 WSGAPFVVSYKGY 221
Score = 125 bits (268), Expect(2) = 8e-047
Identities = 62/78 (79%), Positives = 63/78 (80%)
Frame = +3 / -2
Query: 501 TQXXXXXXR*ETTKGASDQSMPTLPFSVAQ*LPSHSVACSVMGLELGYGRSA*RLKERMK 680
TQ *ETTKGA DQSM TLPFSVAQ*LPSHSVACSVMGLELG RSA*RLK R+
Sbjct: 238 TQASAE*PL*ETTKGAPDQSMGTLPFSVAQ*LPSHSVACSVMGLELG*ARSA*RLKTRIT 59
Query: 681 RSSTLNRMLVGFQMMV*V 734
SSTL RMLVGFQMMV*V
Sbjct: 58 LSSTLKRMLVGFQMMV*V 5
Score = 113 bits (242), Expect(2) = 2e-038
Identities = 50/61 (81%), Positives = 51/61 (83%)
Frame = +2 / -1
Query: 554 PVDADPALLGGPVAAVPQRGVQRHGPGARVRQVGVALEGADEEVVDLEQDAGRVPDDGVG 733
PVD ALLGGPVAAVPQRGVQRHG GARV QVGVALE AD VV LE+D GRVPDDGVG
Sbjct: 185 PVDGHLALLGGPVAAVPQRGVQRHGLGARVGQVGVALEDADHVVVHLEEDVGRVPDDGVG 6
Query: 734 V 736
V
Sbjct: 5 V 3
Score = 109 bits (232), Expect(3) = 2e-067
Identities = 38/48 (79%), Positives = 43/48 (89%)
Frame = -2 / +3
Query: 463 WMNRQLDSAEWGTVRWAERNFMRYNYCQDGWRFPQGLPAECARH*YAS 320
WMN+Q DSAEWGTV+WAE N+MRYNYC DGWRFPQGLPAEC+R *+ S
Sbjct: 273 WMNKQPDSAEWGTVKWAESNYMRYNYCDDGWRFPQGLPAECSRS*FNS 416
Score = 83.1 bits (175), Expect(2) = 8e-047
Identities = 37/44 (84%), Positives = 37/44 (84%)
Frame = +3 / -2
Query: 330 QWRAHSAGSPCGNLHPSWQ*L*RMKLRSAHLTVPHSALSSCLFI 461
Q R HSAGSPCGNL PS Q*L*RM L SAHLTVPHSALS CLFI
Sbjct: 406 QLRLHSAGSPCGNLQPSSQ*L*RM*LLSAHLTVPHSALSGCLFI 275
Score = 82.2 bits (173), Expect(3) = 9e-028
Identities = 34/42 (80%), Positives = 36/42 (85%)
Frame = -1 / +2
Query: 698 VQGRRPLHPLLQALRRPAVPELQAHDAARHAVGRQLLGHREG 573
+QG R P LQALRRP +PELQAHDAARHAVGRQLLGHREG
Sbjct: 41 LQGGRQRDPRLQALRRPGLPELQAHDAARHAVGRQLLGHREG 166
Score = 67.0 bits (140), Expect(2) = 2e-038
Identities = 30/44 (68%), Positives = 34/44 (77%)
Frame = +2 / -1
Query: 329 SVAGALGGESLREPPPILAVVVAHEVALRPPDGAPLGAVKLPVH 460
S A AL + LREPP ++AVVVAH VAL P DGAPLGAV+L VH
Sbjct: 407 SAAAALRRQPLREPPAVVAVVVAHVVALGPLDGAPLGAVRLLVH 276
Score = 56.5 bits (117), Expect(3) = 9e-028
Identities = 25/27 (92%), Positives = 25/27 (92%)
Frame = -1 / +2
Query: 464 VDEQAA*QRRVGHRQVGGAQLHALQLL 384
VDEQAA*QRRVGHRQVG QLHALQLL
Sbjct: 272 VDEQAA*QRRVGHRQVGREQLHALQLL 352
Score = 25.8 bits (50), Expect(3) = 2e-067
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = -1 / +1
Query: 302 FVGYSFFFYGYMILALLCGFVIKKQPCS*QRVG 204
F+ + + +++ LL FVI+KQP S R G
Sbjct: 484 FIFAGYIYISMILVLLL*IFVIEKQPRSNARAG 582
Score = 24.0 bits (46), Expect(3) = 9e-028
Identities = 9/31 (29%), Positives = 15/31 (48%)
Frame = -3 / +3
Query: 348 PSAPATDMRPPVNSLFCWVFFFFLRVYDSCS 256
PS RP + + + ++ +YDSCS
Sbjct: 435 PSFQTQFRRPLLPKFLIYFCWIYIYIYDSCS 527
>gb|CX616461.1|CX616461 GABR1_28_C04.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_28_C04_A002 3', mRNA sequence
Length = 587
Score = 138 bits (296), Expect(3) = 3e-067
Identities = 54/62 (87%), Positives = 58/62 (93%)
Frame = -2 / +3
Query: 703 ILFKVDDLFIRSFKRYADLPYPSSRPMTLHATLWDGSYWATEKGRVGIDWSDAPFVVSYR 524
ILFKVD+L IRSFKRYADL YPSS+PMTLHATLWDGSYWATEKG++ IDWS APFVVSYR
Sbjct: 3 ILFKVDNLLIRSFKRYADLAYPSSKPMTLHATLWDGSYWATEKGKMPIDWSGAPFVVSYR 182
Query: 523 SY 518
SY
Sbjct: 183 SY 188
Score = 114 bits (243), Expect(3) = 4e-055
Identities = 54/68 (79%), Positives = 56/68 (82%)
Frame = +3 / -2
Query: 501 TQXXXXXXR*ETTKGASDQSMPTLPFSVAQ*LPSHSVACSVMGLELGYGRSA*RLKERMK 680
TQ R*ETTKGA DQSM LPFSVAQ*LPSHSVACSVMGLELG RSA*RLK+RM+
Sbjct: 205 TQALAA*LR*ETTKGAPDQSMGILPFSVAQ*LPSHSVACSVMGLELG*ARSA*RLKDRMR 26
Query: 681 RSSTLNRM 704
R STLNRM
Sbjct: 25 RLSTLNRM 2
Score = 111 bits (238), Expect(3) = 3e-067
Identities = 40/45 (88%), Positives = 44/45 (97%)
Frame = -2 / +3
Query: 463 WMNRQLDSAEWGTVRWAERNFMRYNYCQDGWRFPQGLPAECARH* 329
WM+RQLD+AE GTVRWAE+NFMRYNYCQDGWRFPQGLPAEC+RH*
Sbjct: 240 WMHRQLDNAERGTVRWAEKNFMRYNYCQDGWRFPQGLPAECSRH* 374
Score = 96.4 bits (204), Expect(3) = 8e-047
Identities = 40/44 (90%), Positives = 41/44 (93%)
Frame = +2 / -1
Query: 329 SVAGALGGESLREPPPILAVVVAHEVALRPPDGAPLGAVKLPVH 460
SVA ALGGESLREPPPILAVVVAHEV LRPPDGAPLG V+LPVH
Sbjct: 374 SVAAALGGESLREPPPILAVVVAHEVLLRPPDGAPLGVVELPVH 243
Score = 96.4 bits (204), Expect(3) = 4e-055
Identities = 39/45 (86%), Positives = 40/45 (88%)
Frame = +3 / -2
Query: 327 YQWRAHSAGSPCGNLHPSWQ*L*RMKLRSAHLTVPHSALSSCLFI 461
+QWR HSAGSPCGNLHPSWQ*L*RMK SAHLTVP SALSSCL I
Sbjct: 376 HQWRLHSAGSPCGNLHPSWQ*L*RMKFFSAHLTVPRSALSSCLCI 242
Score = 87.7 bits (185), Expect(3) = 8e-047
Identities = 40/50 (80%), Positives = 40/50 (80%)
Frame = +2 / -1
Query: 554 PVDADPALLGGPVAAVPQRGVQRHGPGARVRQVGVALEGADEEVVDLEQD 703
PVD ALL PVAAVPQRGVQRHG GARV QVGV LEG DEEVV LEQD
Sbjct: 152 PVDGHLALLRRPVAAVPQRGVQRHGLGARVGQVGVTLEGPDEEVVHLEQD 3
Score = 83.1 bits (175), Expect(4) = 1e-039
Identities = 34/42 (80%), Positives = 37/42 (88%)
Frame = -1 / +2
Query: 698 VQGRRPLHPLLQALRRPAVPELQAHDAARHAVGRQLLGHREG 573
VQG +P HP+LQALRRP +PELQAHDAARHAVGRQLLG EG
Sbjct: 8 VQGGQPPHPVLQALRRPGLPELQAHDAARHAVGRQLLGDGEG 133
Score = 62.9 bits (131), Expect(4) = 1e-039
Identities = 25/30 (83%), Positives = 26/30 (86%)
Frame = -1 / +2
Query: 464 VDEQAA*QRRVGHRQVGGAQLHALQLLPGW 375
VD QAA QRR GHRQVGG +LHALQLLPGW
Sbjct: 239 VDAQAARQRRAGHRQVGGEELHALQLLPGW 328
Score = 45.5 bits (93), Expect(3) = 3e-067
Identities = 18/22 (81%), Positives = 18/22 (81%)
Frame = -1 / +1
Query: 287 FFFYGYMILALLCGFVIKKQPC 222
F F GYMIL LLC FVIKKQPC
Sbjct: 448 FRFLGYMILILLCEFVIKKQPC 513
Score = 44.6 bits (91), Expect(3) = 4e-055
Identities = 19/36 (52%), Positives = 24/36 (66%)
Frame = +2 / -2
Query: 203 RPHVASCRAAF*SQIHKEEQESYTRRKKKNTQQNKE 310
+P CRAAF*SQIHK E ESYT+ + N N++
Sbjct: 532 QPPTRFCRAAF*SQIHKVE*ESYTQENETNAINNEQ 425
Score = 43.2 bits (88), Expect(3) = 8e-047
Identities = 17/24 (70%), Positives = 19/24 (79%)
Frame = +1 / -1
Query: 220 LQGCFLITNPQRRARIIYP*KKKE 291
LQGCFLITN Q R RIIYP K+ +
Sbjct: 515 LQGCFLITNSQSRIRIIYPRKRNQ 444
Score = 40.9 bits (83), Expect(4) = 1e-039
Identities = 16/17 (94%), Positives = 16/17 (94%)
Frame = -3 / +1
Query: 378 MGGGSRKDSPPSAPATD 328
MGGGSRKDSPPSA ATD
Sbjct: 325 MGGGSRKDSPPSAAATD 375
Score = 33.6 bits (67), Expect(4) = 1e-039
Identities = 16/21 (76%), Positives = 17/21 (80%)
Frame = -3 / +3
Query: 282 FLRVYDSCSSLWICD*KAALQ 220
F VYDS S+L ICD*KAALQ
Sbjct: 453 FSWVYDSYSTL*ICD*KAALQ 515
>gb|CN143916.1|CN143916 WOUND1_19_D07.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_19_D07_A002 3', mRNA sequence
Length = 682
Score = 161 bits (346), Expect(3) = 2e-066
Identities = 62/73 (84%), Positives = 66/73 (90%)
Frame = -2 / +3
Query: 736 HTYTIIWNPTSILFKVDDLFIRSFKRYADLPYPSSRPMTLHATLWDGSYWATEKGRVGID 557
HTYTIIWNPT+ILFKVDD IR FKRYADL YPSS+PMTLHATLWDGSYWATEKG+V ID
Sbjct: 63 HTYTIIWNPTNILFKVDDNVIRVFKRYADLAYPSSKPMTLHATLWDGSYWATEKGKVPID 242
Query: 556 WSDAPFVVSYRSY 518
WS APFVVSY+ Y
Sbjct: 243 WSGAPFVVSYKGY 281
Score = 125 bits (268), Expect(2) = 4e-046
Identities = 62/78 (79%), Positives = 63/78 (80%)
Frame = +3 / -1
Query: 501 TQXXXXXXR*ETTKGASDQSMPTLPFSVAQ*LPSHSVACSVMGLELGYGRSA*RLKERMK 680
TQ *ETTKGA DQSM TLPFSVAQ*LPSHSVACSVMGLELG RSA*RLK R+
Sbjct: 298 TQASAE*PL*ETTKGAPDQSMGTLPFSVAQ*LPSHSVACSVMGLELG*ARSA*RLKTRIT 119
Query: 681 RSSTLNRMLVGFQMMV*V 734
SSTL RMLVGFQMMV*V
Sbjct: 118 LSSTLKRMLVGFQMMV*V 65
Score = 115 bits (245), Expect(2) = 3e-038
Identities = 51/63 (80%), Positives = 52/63 (82%)
Frame = +2 / -3
Query: 554 PVDADPALLGGPVAAVPQRGVQRHGPGARVRQVGVALEGADEEVVDLEQDAGRVPDDGVG 733
PVD ALLGGPVAAVPQRGVQRHG GARV QVGVALE AD VV LE+D GRVPDDGVG
Sbjct: 245 PVDGHLALLGGPVAAVPQRGVQRHGLGARVGQVGVALEDADHVVVHLEEDVGRVPDDGVG 66
Query: 734 VCV 742
V V
Sbjct: 65 VVV 57
Score = 105 bits (225), Expect(3) = 2e-066
Identities = 37/48 (77%), Positives = 42/48 (87%)
Frame = -2 / +3
Query: 463 WMNRQLDSAEWGTVRWAERNFMRYNYCQDGWRFPQGLPAECARH*YAS 320
WMN+Q SAEWGTV+WAE N+MRYNYC DGWRFPQGLPAEC+R *+ S
Sbjct: 333 WMNKQPGSAEWGTVKWAESNYMRYNYCDDGWRFPQGLPAECSRS*FNS 476
Score = 82.2 bits (173), Expect(4) = 2e-027
Identities = 34/42 (80%), Positives = 36/42 (85%)
Frame = -1 / +2
Query: 698 VQGRRPLHPLLQALRRPAVPELQAHDAARHAVGRQLLGHREG 573
+QG R P LQALRRP +PELQAHDAARHAVGRQLLGHREG
Sbjct: 101 LQGGRQRDPRLQALRRPGLPELQAHDAARHAVGRQLLGHREG 226
Score = 80.8 bits (170), Expect(2) = 4e-046
Identities = 36/44 (81%), Positives = 36/44 (81%)
Frame = +3 / -1
Query: 330 QWRAHSAGSPCGNLHPSWQ*L*RMKLRSAHLTVPHSALSSCLFI 461
Q R HSAGSPCGNL PS Q*L*RM L SAHLTVPHSAL CLFI
Sbjct: 466 QLRLHSAGSPCGNLQPSSQ*L*RM*LLSAHLTVPHSALPGCLFI 335
Score = 65.2 bits (136), Expect(2) = 3e-038
Identities = 29/44 (65%), Positives = 33/44 (75%)
Frame = +2 / -3
Query: 329 SVAGALGGESLREPPPILAVVVAHEVALRPPDGAPLGAVKLPVH 460
S A AL + LREPP ++AVVVAH VAL P DGAPLGA +L VH
Sbjct: 467 SAAAALRRQPLREPPAVVAVVVAHVVALGPLDGAPLGAARLLVH 336
Score = 54.2 bits (112), Expect(4) = 2e-027
Identities = 24/27 (88%), Positives = 24/27 (88%)
Frame = -1 / +2
Query: 464 VDEQAA*QRRVGHRQVGGAQLHALQLL 384
VDEQAA QRRVGHRQVG QLHALQLL
Sbjct: 332 VDEQAAWQRRVGHRQVGREQLHALQLL 412
Score = 25.8 bits (50), Expect(3) = 2e-066
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = -1 / +1
Query: 302 FVGYSFFFYGYMILALLCGFVIKKQPCS*QRVG 204
F+ + + +++ LL FVI+KQP S R G
Sbjct: 544 FIFAGYIYISMILVLLL*IFVIEKQPRSNARAG 642
Score = 24.0 bits (46), Expect(4) = 2e-027
Identities = 9/31 (29%), Positives = 15/31 (48%)
Frame = -3 / +3
Query: 348 PSAPATDMRPPVNSLFCWVFFFFLRVYDSCS 256
PS RP + + + ++ +YDSCS
Sbjct: 495 PSFQTQFRRPLLPKFLIYFCWIYIYIYDSCS 587
Score = 21.7 bits (41), Expect(4) = 2e-027
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -3 / +1
Query: 741 THTPTPSSG 715
T TPTPSSG
Sbjct: 58 TTTPTPSSG 84
>gb|CN131128.1|CN131128 RHOH1_46_C04.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_46_C04_A002 3', mRNA sequence
Length = 600
Score = 158 bits (339), Expect(3) = 2e-066
Identities = 61/73 (83%), Positives = 65/73 (89%)
Frame = -2 / +2
Query: 736 HTYTIIWNPTSILFKVDDLFIRSFKRYADLPYPSSRPMTLHATLWDGSYWATEKGRVGID 557
HTYTIIWNPT+ILFKVDD IR FKRYADL YPSS+PMTLHATLWDGSYWATEKG+V I
Sbjct: 8 HTYTIIWNPTNILFKVDDNVIRVFKRYADLAYPSSKPMTLHATLWDGSYWATEKGKVPIG 187
Query: 556 WSDAPFVVSYRSY 518
WS APFVVSY+ Y
Sbjct: 188 WSGAPFVVSYKGY 226
Score = 123 bits (263), Expect(2) = 4e-046
Identities = 61/78 (78%), Positives = 62/78 (79%)
Frame = +3 / -1
Query: 501 TQXXXXXXR*ETTKGASDQSMPTLPFSVAQ*LPSHSVACSVMGLELGYGRSA*RLKERMK 680
TQ *ETTKGA DQ M TLPFSVAQ*LPSHSVACSVMGLELG RSA*RLK R+
Sbjct: 243 TQASAE*PL*ETTKGAPDQPMGTLPFSVAQ*LPSHSVACSVMGLELG*ARSA*RLKTRIT 64
Query: 681 RSSTLNRMLVGFQMMV*V 734
SSTL RMLVGFQMMV*V
Sbjct: 63 LSSTLKRMLVGFQMMV*V 10
Score = 113 bits (241), Expect(2) = 3e-038
Identities = 50/63 (79%), Positives = 51/63 (80%)
Frame = +2 / -3
Query: 554 PVDADPALLGGPVAAVPQRGVQRHGPGARVRQVGVALEGADEEVVDLEQDAGRVPDDGVG 733
P D ALLGGPVAAVPQRGVQRHG GARV QVGVALE AD VV LE+D GRVPDDGVG
Sbjct: 190 PADGHLALLGGPVAAVPQRGVQRHGLGARVGQVGVALEDADHVVVHLEEDVGRVPDDGVG 11
Query: 734 VCV 742
V V
Sbjct: 10 VVV 2
Score = 109 bits (232), Expect(3) = 2e-066
Identities = 38/48 (79%), Positives = 43/48 (89%)
Frame = -2 / +2
Query: 463 WMNRQLDSAEWGTVRWAERNFMRYNYCQDGWRFPQGLPAECARH*YAS 320
WMN+Q DSAEWGTV+WAE N+MRYNYC DGWRFPQGLPAEC+R *+ S
Sbjct: 278 WMNKQPDSAEWGTVKWAESNYMRYNYCDDGWRFPQGLPAECSRS*FNS 421
Score = 83.1 bits (175), Expect(2) = 4e-046
Identities = 37/44 (84%), Positives = 37/44 (84%)
Frame = +3 / -1
Query: 330 QWRAHSAGSPCGNLHPSWQ*L*RMKLRSAHLTVPHSALSSCLFI 461
Q R HSAGSPCGNL PS Q*L*RM L SAHLTVPHSALS CLFI
Sbjct: 411 QLRLHSAGSPCGNLQPSSQ*L*RM*LLSAHLTVPHSALSGCLFI 280
Score = 82.2 bits (173), Expect(4) = 2e-028
Identities = 34/42 (80%), Positives = 36/42 (85%)
Frame = -1 / +1
Query: 698 VQGRRPLHPLLQALRRPAVPELQAHDAARHAVGRQLLGHREG 573
+QG R P LQALRRP +PELQAHDAARHAVGRQLLGHREG
Sbjct: 46 LQGGRQRDPRLQALRRPGLPELQAHDAARHAVGRQLLGHREG 171
Score = 67.0 bits (140), Expect(2) = 3e-038
Identities = 30/44 (68%), Positives = 34/44 (77%)
Frame = +2 / -3
Query: 329 SVAGALGGESLREPPPILAVVVAHEVALRPPDGAPLGAVKLPVH 460
S A AL + LREPP ++AVVVAH VAL P DGAPLGAV+L VH
Sbjct: 412 SAAAALRRQPLREPPAVVAVVVAHVVALGPLDGAPLGAVRLLVH 281
Score = 56.5 bits (117), Expect(4) = 2e-028
Identities = 25/27 (92%), Positives = 25/27 (92%)
Frame = -1 / +1
Query: 464 VDEQAA*QRRVGHRQVGGAQLHALQLL 384
VDEQAA*QRRVGHRQVG QLHALQLL
Sbjct: 277 VDEQAA*QRRVGHRQVGREQLHALQLL 357
Score = 25.8 bits (50), Expect(3) = 2e-066
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = -1 / +3
Query: 302 FVGYSFFFYGYMILALLCGFVIKKQPCS*QRVG 204
F+ + + +++ LL FVI+KQP S R G
Sbjct: 489 FIFAGYIYISMILVLLL*IFVIEKQPRSNARAG 587
Score = 24.0 bits (46), Expect(4) = 2e-028
Identities = 9/31 (29%), Positives = 15/31 (48%)
Frame = -3 / +2
Query: 348 PSAPATDMRPPVNSLFCWVFFFFLRVYDSCS 256
PS RP + + + ++ +YDSCS
Sbjct: 440 PSFQTQFRRPLLPKFLIYFCWIYIYIYDSCS 532
Score = 21.7 bits (41), Expect(4) = 2e-028
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -3 / +3
Query: 741 THTPTPSSG 715
T TPTPSSG
Sbjct: 3 TTTPTPSSG 29
>gb|CW299073.1|CW299073 104_781_11462920_148_35657_050 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11462920, DNA
sequence
Length = 623
Score = 161 bits (346), Expect(2) = 3e-065
Identities = 62/73 (84%), Positives = 66/73 (90%)
Frame = -2 / -1
Query: 736 HTYTIIWNPTSILFKVDDLFIRSFKRYADLPYPSSRPMTLHATLWDGSYWATEKGRVGID 557
HTYTIIWNPT+ILFKVDD IR FKRYADL YPSS+PMTLHATLWDGSYWATEKG+V ID
Sbjct: 479 HTYTIIWNPTNILFKVDDNVIRVFKRYADLAYPSSKPMTLHATLWDGSYWATEKGKVPID 300
Query: 556 WSDAPFVVSYRSY 518
WS APFVVSY+ Y
Sbjct: 299 WSGAPFVVSYKGY 261
Score = 125 bits (268), Expect(2) = 8e-047
Identities = 62/78 (79%), Positives = 63/78 (80%)
Frame = +3 / +1
Query: 501 TQXXXXXXR*ETTKGASDQSMPTLPFSVAQ*LPSHSVACSVMGLELGYGRSA*RLKERMK 680
TQ *ETTKGA DQSM TLPFSVAQ*LPSHSVACSVMGLELG RSA*RLK R+
Sbjct: 244 TQASAE*PL*ETTKGAPDQSMGTLPFSVAQ*LPSHSVACSVMGLELG*ARSA*RLKTRIT 423
Query: 681 RSSTLNRMLVGFQMMV*V 734
SSTL RMLVGFQMMV*V
Sbjct: 424 LSSTLKRMLVGFQMMV*V 477
Score = 115 bits (245), Expect(2) = 7e-039
Identities = 51/63 (80%), Positives = 52/63 (82%)
Frame = +2 / +3
Query: 554 PVDADPALLGGPVAAVPQRGVQRHGPGARVRQVGVALEGADEEVVDLEQDAGRVPDDGVG 733
PVD ALLGGPVAAVPQRGVQRHG GARV QVGVALE AD VV LE+D GRVPDDGVG
Sbjct: 297 PVDGHLALLGGPVAAVPQRGVQRHGLGARVGQVGVALEDADHVVVHLEEDVGRVPDDGVG 476
Query: 734 VCV 742
V V
Sbjct: 477 VVV 485
Score = 109 bits (232), Expect(2) = 3e-065
Identities = 38/48 (79%), Positives = 43/48 (89%)
Frame = -2 / -1
Query: 463 WMNRQLDSAEWGTVRWAERNFMRYNYCQDGWRFPQGLPAECARH*YAS 320
WMN+Q DSAEWGTV+WAE N+MRYNYC DGWRFPQGLPAEC+R *+ S
Sbjct: 209 WMNKQPDSAEWGTVKWAESNYMRYNYCDDGWRFPQGLPAECSRS*FNS 66
Score = 83.1 bits (175), Expect(2) = 8e-047
Identities = 37/44 (84%), Positives = 37/44 (84%)
Frame = +3 / +1
Query: 330 QWRAHSAGSPCGNLHPSWQ*L*RMKLRSAHLTVPHSALSSCLFI 461
Q R HSAGSPCGNL PS Q*L*RM L SAHLTVPHSALS CLFI
Sbjct: 76 QLRLHSAGSPCGNLQPSSQ*L*RM*LLSAHLTVPHSALSGCLFI 207
Score = 82.2 bits (173), Expect(3) = 3e-026
Identities = 34/42 (80%), Positives = 36/42 (85%)
Frame = -1 / -3
Query: 698 VQGRRPLHPLLQALRRPAVPELQAHDAARHAVGRQLLGHREG 573
+QG R P LQALRRP +PELQAHDAARHAVGRQLLGHREG
Sbjct: 441 LQGGRQRDPRLQALRRPGLPELQAHDAARHAVGRQLLGHREG 316
Score = 67.0 bits (140), Expect(2) = 7e-039
Identities = 30/44 (68%), Positives = 34/44 (77%)
Frame = +2 / +3
Query: 329 SVAGALGGESLREPPPILAVVVAHEVALRPPDGAPLGAVKLPVH 460
S A AL + LREPP ++AVVVAH VAL P DGAPLGAV+L VH
Sbjct: 75 SAAAALRRQPLREPPAVVAVVVAHVVALGPLDGAPLGAVRLLVH 206
Score = 56.5 bits (117), Expect(3) = 3e-026
Identities = 25/27 (92%), Positives = 25/27 (92%)
Frame = -1 / -3
Query: 464 VDEQAA*QRRVGHRQVGGAQLHALQLL 384
VDEQAA*QRRVGHRQVG QLHALQLL
Sbjct: 210 VDEQAA*QRRVGHRQVGREQLHALQLL 130
Score = 21.7 bits (41), Expect(3) = 3e-026
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -3 / -2
Query: 741 THTPTPSSG 715
T TPTPSSG
Sbjct: 484 TTTPTPSSG 458
>gb|AW922831.1|AW922831 DG1_46_D12.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 581
Score = 122 bits (262), Expect(4) = 7e-065
Identities = 47/53 (88%), Positives = 50/53 (94%)
Frame = -2 / +2
Query: 676 IRSFKRYADLPYPSSRPMTLHATLWDGSYWATEKGRVGIDWSDAPFVVSYRSY 518
IRSFKRYADL YPSS+PMTLHATLWDGSYWATEKG++ IDWS APFVVSYRSY
Sbjct: 2 IRSFKRYADLAYPSSKPMTLHATLWDGSYWATEKGKMPIDWSGAPFVVSYRSY 160
Score = 118 bits (252), Expect(4) = 7e-065
Identities = 41/45 (91%), Positives = 45/45 (100%)
Frame = -2 / +2
Query: 463 WMNRQLDSAEWGTVRWAERNFMRYNYCQDGWRFPQGLPAECARH* 329
WM+RQLD+AEWGTVRWAE+NFMRYNYCQDGWRFPQGLPAEC+RH*
Sbjct: 212 WMHRQLDNAEWGTVRWAEKNFMRYNYCQDGWRFPQGLPAECSRH* 346
Score = 100 bits (212), Expect(3) = 1e-051
Identities = 40/45 (88%), Positives = 41/45 (91%)
Frame = +3 / -3
Query: 327 YQWRAHSAGSPCGNLHPSWQ*L*RMKLRSAHLTVPHSALSSCLFI 461
+QWR HSAGSPCGNLHPSWQ*L*RMK SAHLTVPHSALSSCL I
Sbjct: 348 HQWRLHSAGSPCGNLHPSWQ*L*RMKFFSAHLTVPHSALSSCLCI 214
Score = 98.7 bits (209), Expect(3) = 1e-051
Identities = 47/59 (79%), Positives = 48/59 (81%)
Frame = +3 / -3
Query: 501 TQXXXXXXR*ETTKGASDQSMPTLPFSVAQ*LPSHSVACSVMGLELGYGRSA*RLKERM 677
TQ R*ETTKGA DQSM LPFSVAQ*LPSHSVACSVMGLELG RSA*RLK+RM
Sbjct: 177 TQALAA*LR*ETTKGAPDQSMGILPFSVAQ*LPSHSVACSVMGLELG*ARSA*RLKDRM 1
Score = 96.4 bits (204), Expect(3) = 2e-042
Identities = 40/44 (90%), Positives = 41/44 (93%)
Frame = +2 / -2
Query: 329 SVAGALGGESLREPPPILAVVVAHEVALRPPDGAPLGAVKLPVH 460
SVA ALGGESLREPPPILAVVVAHEV LRPPDGAPLG V+LPVH
Sbjct: 346 SVAAALGGESLREPPPILAVVVAHEVLLRPPDGAPLGVVELPVH 215
Score = 74.8 bits (157), Expect(4) = 9e-038
Identities = 30/35 (85%), Positives = 32/35 (91%)
Frame = -1 / +1
Query: 677 HPLLQALRRPAVPELQAHDAARHAVGRQLLGHREG 573
HP+LQALRRP +PELQAHDAARHAVGRQLLG EG
Sbjct: 1 HPVLQALRRPGLPELQAHDAARHAVGRQLLGDGEG 105
Score = 72.5 bits (152), Expect(3) = 2e-042
Identities = 33/41 (80%), Positives = 33/41 (80%)
Frame = +2 / -2
Query: 554 PVDADPALLGGPVAAVPQRGVQRHGPGARVRQVGVALEGAD 676
PVD ALL PVAAVPQRGVQRHG GARV QVGVALEG D
Sbjct: 124 PVDGHLALLRRPVAAVPQRGVQRHGLGARVGQVGVALEGPD 2
Score = 64.8 bits (135), Expect(4) = 9e-038
Identities = 26/30 (86%), Positives = 27/30 (90%)
Frame = -1 / +1
Query: 464 VDEQAA*QRRVGHRQVGGAQLHALQLLPGW 375
VD QAA QRRVGHRQVGG +LHALQLLPGW
Sbjct: 211 VDAQAARQRRVGHRQVGGEELHALQLLPGW 300
Score = 45.5 bits (93), Expect(4) = 7e-065
Identities = 18/22 (81%), Positives = 18/22 (81%)
Frame = -1 / +3
Query: 287 FFFYGYMILALLCGFVIKKQPC 222
F F GYMIL LLC FVIKKQPC
Sbjct: 420 FRFLGYMILILLCEFVIKKQPC 485
Score = 44.6 bits (91), Expect(3) = 1e-051
Identities = 19/36 (52%), Positives = 24/36 (66%)
Frame = +2 / -3
Query: 203 RPHVASCRAAF*SQIHKEEQESYTRRKKKNTQQNKE 310
+P CRAAF*SQIHK E ESYT+ + N N++
Sbjct: 504 QPPTRFCRAAF*SQIHKVE*ESYTQENETNAINNEQ 397
Score = 43.2 bits (88), Expect(3) = 2e-042
Identities = 17/24 (70%), Positives = 19/24 (79%)
Frame = +1 / -2
Query: 220 LQGCFLITNPQRRARIIYP*KKKE 291
LQGCFLITN Q R RIIYP K+ +
Sbjct: 487 LQGCFLITNSQSRIRIIYPRKRNQ 416
Score = 40.9 bits (83), Expect(4) = 9e-038
Identities = 16/17 (94%), Positives = 16/17 (94%)
Frame = -3 / +3
Query: 378 MGGGSRKDSPPSAPATD 328
MGGGSRKDSPPSA ATD
Sbjct: 297 MGGGSRKDSPPSAAATD 347
Score = 33.6 bits (67), Expect(4) = 9e-038
Identities = 16/21 (76%), Positives = 17/21 (80%)
Frame = -3 / +2
Query: 282 FLRVYDSCSSLWICD*KAALQ 220
F VYDS S+L ICD*KAALQ
Sbjct: 425 FSWVYDSYSTL*ICD*KAALQ 487
Score = 21.7 bits (41), Expect(4) = 7e-065
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -2 / +1
Query: 160 FYRAFGY 140
FYRAFGY
Sbjct: 544 FYRAFGY 564
>gb|CN151725.1|CN151725 WOUND1_77_E10.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_77_E10_A002 3', mRNA sequence
Length = 565
Score = 146 bits (314), Expect(3) = 5e-063
Identities = 56/67 (83%), Positives = 60/67 (89%)
Frame = -2 / +1
Query: 718 WNPTSILFKVDDLFIRSFKRYADLPYPSSRPMTLHATLWDGSYWATEKGRVGIDWSDAPF 539
WNPT+ILFKVDD IR FKRYADL YPSS+PMTLHATLWDGSYWATEKG+V IDWS APF
Sbjct: 1 WNPTNILFKVDDKVIRVFKRYADLAYPSSKPMTLHATLWDGSYWATEKGKVPIDWSGAPF 180
Query: 538 VVSYRSY 518
VVSY+ Y
Sbjct: 181 VVSYKGY 201
Score = 114 bits (244), Expect(2) = 2e-043
Identities = 56/72 (77%), Positives = 57/72 (79%)
Frame = +3 / -3
Query: 501 TQXXXXXXR*ETTKGASDQSMPTLPFSVAQ*LPSHSVACSVMGLELGYGRSA*RLKERMK 680
TQ *ETTKGA DQSM TLPFSVAQ*LPSHSVACSVMGLELG RSA*RLK R+
Sbjct: 218 TQASAE*PL*ETTKGAPDQSMGTLPFSVAQ*LPSHSVACSVMGLELG*ARSA*RLKTRIT 39
Query: 681 RSSTLNRMLVGF 716
SSTL RMLVGF
Sbjct: 38 LSSTLKRMLVGF 3
Score = 109 bits (232), Expect(3) = 5e-063
Identities = 38/48 (79%), Positives = 43/48 (89%)
Frame = -2 / +1
Query: 463 WMNRQLDSAEWGTVRWAERNFMRYNYCQDGWRFPQGLPAECARH*YAS 320
WMN+Q DSAEWGTV+WAE N+MRYNYC DGWRFPQGLPAEC+R *+ S
Sbjct: 253 WMNKQPDSAEWGTVKWAESNYMRYNYCDDGWRFPQGLPAECSRS*FNS 396
Score = 95.9 bits (203), Expect(2) = 4e-033
Identities = 42/55 (76%), Positives = 44/55 (80%)
Frame = +2 / -2
Query: 554 PVDADPALLGGPVAAVPQRGVQRHGPGARVRQVGVALEGADEEVVDLEQDAGRVP 718
PVD ALLGGPVAAVPQRGVQRHG GARV QVGV LE AD V+ LE+D GRVP
Sbjct: 165 PVDGHLALLGGPVAAVPQRGVQRHGLGARVGQVGVTLEDADHLVIHLEKDVGRVP 1
Score = 83.1 bits (175), Expect(2) = 2e-043
Identities = 37/44 (84%), Positives = 37/44 (84%)
Frame = +3 / -3
Query: 330 QWRAHSAGSPCGNLHPSWQ*L*RMKLRSAHLTVPHSALSSCLFI 461
Q R HSAGSPCGNL PS Q*L*RM L SAHLTVPHSALS CLFI
Sbjct: 386 QLRLHSAGSPCGNLQPSSQ*L*RM*LLSAHLTVPHSALSGCLFI 255
Score = 77.1 bits (162), Expect(3) = 3e-026
Identities = 31/34 (91%), Positives = 32/34 (94%)
Frame = -1 / +3
Query: 674 PLLQALRRPAVPELQAHDAARHAVGRQLLGHREG 573
P LQALRRP +PELQAHDAARHAVGRQLLGHREG
Sbjct: 45 PRLQALRRPGLPELQAHDAARHAVGRQLLGHREG 146
Score = 67.0 bits (140), Expect(2) = 4e-033
Identities = 30/44 (68%), Positives = 34/44 (77%)
Frame = +2 / -2
Query: 329 SVAGALGGESLREPPPILAVVVAHEVALRPPDGAPLGAVKLPVH 460
S A AL + LREPP ++AVVVAH VAL P DGAPLGAV+L VH
Sbjct: 387 SAAAALRRQPLREPPAVVAVVVAHVVALGPLDGAPLGAVRLLVH 256
Score = 56.5 bits (117), Expect(3) = 3e-026
Identities = 25/27 (92%), Positives = 25/27 (92%)
Frame = -1 / +3
Query: 464 VDEQAA*QRRVGHRQVGGAQLHALQLL 384
VDEQAA*QRRVGHRQVG QLHALQLL
Sbjct: 252 VDEQAA*QRRVGHRQVGREQLHALQLL 332
Score = 25.8 bits (50), Expect(3) = 5e-063
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = -1 / +2
Query: 302 FVGYSFFFYGYMILALLCGFVIKKQPCS*QRVG 204
F+ + + +++ LL FVI+KQP S R G
Sbjct: 464 FIFAGYIYISMILVLLL*IFVIEKQPRSNARAG 562
Score = 24.0 bits (46), Expect(3) = 3e-026
Identities = 9/31 (29%), Positives = 15/31 (48%)
Frame = -3 / +1
Query: 348 PSAPATDMRPPVNSLFCWVFFFFLRVYDSCS 256
PS RP + + + ++ +YDSCS
Sbjct: 415 PSFQTQFRRPLLPKFLIYFCWIYIYIYDSCS 507
>gb|CW451375.1|CW451375 fsbb001f191g19f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f191g19, DNA
sequence
Length = 624
Score = 170 bits (365), Expect(3) = 3e-062
Identities = 65/73 (89%), Positives = 70/73 (95%)
Frame = -2 / +1
Query: 736 HTYTIIWNPTSILFKVDDLFIRSFKRYADLPYPSSRPMTLHATLWDGSYWATEKGRVGID 557
HTYTIIWNPT+ILFKVD+LFIRSFKRYADL YPSS+PMTLHATLWDGSYWATEKG++ ID
Sbjct: 160 HTYTIIWNPTNILFKVDNLFIRSFKRYADLAYPSSKPMTLHATLWDGSYWATEKGKMPID 339
Query: 556 WSDAPFVVSYRSY 518
WS APFVVSYRSY
Sbjct: 340 WSGAPFVVSYRSY 378
Score = 133 bits (286), Expect(3) = 4e-052
Identities = 64/78 (82%), Positives = 65/78 (83%)
Frame = +3 / -2
Query: 501 TQXXXXXXR*ETTKGASDQSMPTLPFSVAQ*LPSHSVACSVMGLELGYGRSA*RLKERMK 680
TQ R*ETTKGA DQSM LPFSVAQ*LPSHSVACSVMGLELG RSA*RLK+RMK
Sbjct: 395 TQALAA*LR*ETTKGAPDQSMGILPFSVAQ*LPSHSVACSVMGLELG*ARSA*RLKDRMK 216
Query: 681 RSSTLNRMLVGFQMMV*V 734
R STLNRM VGFQMMV*V
Sbjct: 215 RLSTLNRMFVGFQMMV*V 162
Score = 111 bits (238), Expect(2) = 4e-036
Identities = 51/63 (80%), Positives = 51/63 (80%)
Frame = +2 / -1
Query: 554 PVDADPALLGGPVAAVPQRGVQRHGPGARVRQVGVALEGADEEVVDLEQDAGRVPDDGVG 733
PVD ALL PVAAVPQRGVQRHG GARV QVGVALEG DEEVV LEQD RVPDDGVG
Sbjct: 342 PVDGHLALLRRPVAAVPQRGVQRHGLGARVGQVGVALEGPDEEVVHLEQDVRRVPDDGVG 163
Query: 734 VCV 742
V V
Sbjct: 162 VVV 154
Score = 86.3 bits (182), Expect(3) = 3e-035
Identities = 35/42 (83%), Positives = 38/42 (90%)
Frame = -1 / +3
Query: 698 VQGRRPLHPLLQALRRPAVPELQAHDAARHAVGRQLLGHREG 573
VQG +PLHP+LQALRRP +PELQAHDAARHAVGRQLLG EG
Sbjct: 198 VQGGQPLHPVLQALRRPGLPELQAHDAARHAVGRQLLGDGEG 323
Score = 82.6 bits (174), Expect(3) = 3e-035
Identities = 29/38 (76%), Positives = 32/38 (84%)
Frame = -2 / +1
Query: 463 WMNRQLDSAEWGTVRWAERNFMRYNYCQDGWRFPQGLP 350
WM+RQLD+AEWGTVRWAE+NFMRYNYCQDG P P
Sbjct: 430 WMHRQLDNAEWGTVRWAEKNFMRYNYCQDGVEVPARTP 543
Score = 64.8 bits (135), Expect(3) = 3e-062
Identities = 26/30 (86%), Positives = 27/30 (90%)
Frame = -1 / +3
Query: 464 VDEQAA*QRRVGHRQVGGAQLHALQLLPGW 375
VD QAA QRRVGHRQVGG +LHALQLLPGW
Sbjct: 429 VDAQAARQRRVGHRQVGGEELHALQLLPGW 518
Score = 64.8 bits (135), Expect(3) = 4e-052
Identities = 26/29 (89%), Positives = 27/29 (93%)
Frame = +2 / -1
Query: 374 PILAVVVAHEVALRPPDGAPLGAVKLPVH 460
PILAVVVAHEV LRPPDGAPLG V+LPVH
Sbjct: 519 PILAVVVAHEVLLRPPDGAPLGVVELPVH 433
Score = 61.1 bits (127), Expect(2) = 4e-036
Identities = 28/37 (75%), Positives = 28/37 (75%)
Frame = +3 / -2
Query: 351 GSPCGNLHPSWQ*L*RMKLRSAHLTVPHSALSSCLFI 461
G G PSWQ*L*RMK SAHLTVPHSALSSCL I
Sbjct: 542 GVLAGTSTPSWQ*L*RMKFFSAHLTVPHSALSSCLCI 432
Score = 46.4 bits (95), Expect(3) = 4e-052
Identities = 15/17 (88%), Positives = 16/17 (94%)
Frame = +3 / -1
Query: 327 YQWRAHSAGSPCGNLHP 377
+QWR HSAGSPCGNLHP
Sbjct: 567 HQWRLHSAGSPCGNLHP 517
Score = 44.1 bits (90), Expect(3) = 3e-062
Identities = 15/16 (93%), Positives = 16/16 (100%)
Frame = -2 / +2
Query: 376 GWRFPQGLPAECARH* 329
GWRFPQGLPAEC+RH*
Sbjct: 518 GWRFPQGLPAECSRH* 565
Score = 21.7 bits (41), Expect(3) = 3e-035
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -3 / +2
Query: 741 THTPTPSSG 715
T TPTPSSG
Sbjct: 155 TTTPTPSSG 181
>gb|BG102496.1|BG102496 RHIZ2_33_G06.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 557
Score = 119 bits (255), Expect(3) = 3e-062
Identities = 42/45 (93%), Positives = 45/45 (100%)
Frame = -2 / +3
Query: 463 WMNRQLDSAEWGTVRWAERNFMRYNYCQDGWRFPQGLPAECARH* 329
WM+RQLDSAEWGTVRWAE+NFMRYNYCQDGWRFPQGLPAEC+RH*
Sbjct: 198 WMHRQLDSAEWGTVRWAEKNFMRYNYCQDGWRFPQGLPAECSRH* 332
Score = 111 bits (238), Expect(3) = 3e-062
Identities = 42/48 (87%), Positives = 45/48 (93%)
Frame = -2 / +3
Query: 661 RYADLPYPSSRPMTLHATLWDGSYWATEKGRVGIDWSDAPFVVSYRSY 518
RYADL YPSS+PMTLHATLWDGSYWATEKG++ IDWS APFVVSYRSY
Sbjct: 3 RYADLAYPSSKPMTLHATLWDGSYWATEKGKMPIDWSGAPFVVSYRSY 146
Score = 100 bits (212), Expect(4) = 9e-052
Identities = 40/45 (88%), Positives = 41/45 (91%)
Frame = +3 / -2
Query: 327 YQWRAHSAGSPCGNLHPSWQ*L*RMKLRSAHLTVPHSALSSCLFI 461
+QWR HSAGSPCGNLHPSWQ*L*RMK SAHLTVPHSALSSCL I
Sbjct: 334 HQWRLHSAGSPCGNLHPSWQ*L*RMKFFSAHLTVPHSALSSCLCI 200
Score = 96.8 bits (205), Expect(3) = 9e-040
Identities = 40/44 (90%), Positives = 42/44 (95%)
Frame = +2 / -1
Query: 329 SVAGALGGESLREPPPILAVVVAHEVALRPPDGAPLGAVKLPVH 460
SVA ALGGESLREPPPILAVVVAHEV LRPPDG+PLGAV+LPVH
Sbjct: 332 SVAAALGGESLREPPPILAVVVAHEVLLRPPDGSPLGAVELPVH 201
Score = 88.6 bits (187), Expect(4) = 9e-052
Identities = 43/54 (79%), Positives = 43/54 (79%)
Frame = +3 / -2
Query: 501 TQXXXXXXR*ETTKGASDQSMPTLPFSVAQ*LPSHSVACSVMGLELGYGRSA*R 662
TQ R*ETTKGA DQSM LPFSVAQ*LPSHSVACSVMGLELG RSA*R
Sbjct: 163 TQALAE*LR*ETTKGAPDQSMGILPFSVAQ*LPSHSVACSVMGLELG*ARSA*R 2
Score = 62.9 bits (131), Expect(3) = 9e-040
Identities = 28/36 (77%), Positives = 29/36 (80%)
Frame = +2 / -1
Query: 554 PVDADPALLGGPVAAVPQRGVQRHGPGARVRQVGVA 661
PVD ALL PVAAVPQRGVQRHG GAR+ QVGVA
Sbjct: 110 PVDGHLALLRRPVAAVPQRGVQRHGLGARIGQVGVA 3
Score = 61.6 bits (128), Expect(4) = 7e-034
Identities = 25/30 (83%), Positives = 27/30 (90%)
Frame = -1 / +2
Query: 464 VDEQAA*QRRVGHRQVGGAQLHALQLLPGW 375
VD QAA QRRVG+RQVGG +LHALQLLPGW
Sbjct: 197 VDAQAARQRRVGNRQVGGEELHALQLLPGW 286
Score = 59.7 bits (124), Expect(4) = 7e-034
Identities = 25/30 (83%), Positives = 26/30 (86%)
Frame = -1 / +2
Query: 662 ALRRPAVPELQAHDAARHAVGRQLLGHREG 573
ALRRP + ELQAHDAARHAVGRQLLG EG
Sbjct: 2 ALRRPGLSELQAHDAARHAVGRQLLGDGEG 91
Score = 51.0 bits (105), Expect(4) = 9e-052
Identities = 21/36 (58%), Positives = 26/36 (72%)
Frame = +2 / -3
Query: 203 RPHVASCRAAF*SQIHKEEQESYTRRKKKNTQQNKE 310
+P CRAAF*SQIHK EQESYT+ K+ N N++
Sbjct: 501 QPPTRFCRAAF*SQIHKVEQESYTQEKETNAINNEQ 394
Score = 47.3 bits (97), Expect(3) = 3e-062
Identities = 18/22 (81%), Positives = 18/22 (81%)
Frame = -1 / +3
Query: 287 FFFYGYMILALLCGFVIKKQPC 222
F F GYMIL LLC FVIKKQPC
Sbjct: 417 FLFLGYMILVLLCEFVIKKQPC 482
Score = 43.7 bits (89), Expect(3) = 9e-040
Identities = 17/24 (70%), Positives = 19/24 (79%)
Frame = +1 / -2
Query: 220 LQGCFLITNPQRRARIIYP*KKKE 291
LQGCFLITN Q R RIIYP K+ +
Sbjct: 484 LQGCFLITNSQSRTRIIYPRKRNQ 413
Score = 40.9 bits (83), Expect(4) = 7e-034
Identities = 16/17 (94%), Positives = 16/17 (94%)
Frame = -3 / +1
Query: 378 MGGGSRKDSPPSAPATD 328
MGGGSRKDSPPSA ATD
Sbjct: 283 MGGGSRKDSPPSAAATD 333
Score = 38.6 bits (78), Expect(4) = 7e-034
Identities = 17/21 (80%), Positives = 18/21 (85%)
Frame = -3 / +2
Query: 282 FLRVYDSCSSLWICD*KAALQ 220
F VYDSCS+L ICD*KAALQ
Sbjct: 422 FSWVYDSCSTL*ICD*KAALQ 484
Score = 22.1 bits (42), Expect(4) = 9e-052
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +1 / -3
Query: 157 KKNTCLI*EKLGVQQPPTRC 216
K + L EKLGVQ P C
Sbjct: 540 KLHALLFREKLGVQPPTRFC 481
>gb|BG557261.1|BG557261 EM1_44_F08.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 559
Score = 118 bits (252), Expect(4) = 3e-061
Identities = 41/45 (91%), Positives = 45/45 (100%)
Frame = -2 / +1
Query: 463 WMNRQLDSAEWGTVRWAERNFMRYNYCQDGWRFPQGLPAECARH* 329
WM+RQLD+AEWGTVRWAE+NFMRYNYCQDGWRFPQGLPAEC+RH*
Sbjct: 184 WMHRQLDNAEWGTVRWAEKNFMRYNYCQDGWRFPQGLPAECSRH* 318
Score = 101 bits (216), Expect(4) = 3e-061
Identities = 38/44 (86%), Positives = 41/44 (93%)
Frame = -2 / +1
Query: 649 LPYPSSRPMTLHATLWDGSYWATEKGRVGIDWSDAPFVVSYRSY 518
L YPSS+PMTLHATLWDGSYWATEKG++ IDWS APFVVSYRSY
Sbjct: 1 LAYPSSKPMTLHATLWDGSYWATEKGKMPIDWSGAPFVVSYRSY 132
Score = 100 bits (212), Expect(3) = 1e-046
Identities = 40/45 (88%), Positives = 41/45 (91%)
Frame = +3 / -3
Query: 327 YQWRAHSAGSPCGNLHPSWQ*L*RMKLRSAHLTVPHSALSSCLFI 461
+QWR HSAGSPCGNLHPSWQ*L*RMK SAHLTVPHSALSSCL I
Sbjct: 320 HQWRLHSAGSPCGNLHPSWQ*L*RMKFFSAHLTVPHSALSSCLCI 186
Score = 96.4 bits (204), Expect(3) = 3e-037
Identities = 40/44 (90%), Positives = 41/44 (93%)
Frame = +2 / -2
Query: 329 SVAGALGGESLREPPPILAVVVAHEVALRPPDGAPLGAVKLPVH 460
SVA ALGGESLREPPPILAVVVAHEV LRPPDGAPLG V+LPVH
Sbjct: 318 SVAAALGGESLREPPPILAVVVAHEVLLRPPDGAPLGVVELPVH 187
Score = 82.2 bits (173), Expect(3) = 1e-046
Identities = 38/47 (80%), Positives = 38/47 (80%)
Frame = +3 / -3
Query: 501 TQXXXXXXR*ETTKGASDQSMPTLPFSVAQ*LPSHSVACSVMGLELG 641
TQ R*ETTKGA DQSM LPFSVAQ*LPSHSVACSVMGLELG
Sbjct: 149 TQALAA*LR*ETTKGAPDQSMGILPFSVAQ*LPSHSVACSVMGLELG 9
Score = 64.8 bits (135), Expect(5) = 2e-033
Identities = 26/30 (86%), Positives = 27/30 (90%)
Frame = -1 / +3
Query: 464 VDEQAA*QRRVGHRQVGGAQLHALQLLPGW 375
VD QAA QRRVGHRQVGG +LHALQLLPGW
Sbjct: 183 VDAQAARQRRVGHRQVGGEELHALQLLPGW 272
Score = 55.1 bits (114), Expect(3) = 3e-037
Identities = 25/32 (78%), Positives = 25/32 (78%)
Frame = +2 / -2
Query: 554 PVDADPALLGGPVAAVPQRGVQRHGPGARVRQ 649
PVD ALL PVAAVPQRGVQRHG GARV Q
Sbjct: 96 PVDGHLALLRRPVAAVPQRGVQRHGLGARVGQ 1
Score = 51.9 bits (107), Expect(5) = 2e-033
Identities = 21/24 (87%), Positives = 22/24 (91%)
Frame = -1 / +3
Query: 644 VPELQAHDAARHAVGRQLLGHREG 573
+PELQAHDAARHAVGRQLLG EG
Sbjct: 6 LPELQAHDAARHAVGRQLLGDGEG 77
Score = 45.5 bits (93), Expect(4) = 3e-061
Identities = 18/22 (81%), Positives = 18/22 (81%)
Frame = -1 / +2
Query: 287 FFFYGYMILALLCGFVIKKQPC 222
F F GYMIL LLC FVIKKQPC
Sbjct: 392 FRFLGYMILILLCEFVIKKQPC 457
Score = 44.6 bits (91), Expect(3) = 1e-046
Identities = 19/36 (52%), Positives = 24/36 (66%)
Frame = +2 / -3
Query: 203 RPHVASCRAAF*SQIHKEEQESYTRRKKKNTQQNKE 310
+P CRAAF*SQIHK E ESYT+ + N N++
Sbjct: 476 QPPTRFCRAAF*SQIHKVE*ESYTQENETNAINNEQ 369
Score = 43.2 bits (88), Expect(3) = 3e-037
Identities = 17/24 (70%), Positives = 19/24 (79%)
Frame = +1 / -2
Query: 220 LQGCFLITNPQRRARIIYP*KKKE 291
LQGCFLITN Q R RIIYP K+ +
Sbjct: 459 LQGCFLITNSQSRIRIIYPRKRNQ 388
Score = 40.9 bits (83), Expect(5) = 2e-033
Identities = 16/17 (94%), Positives = 16/17 (94%)
Frame = -3 / +2
Query: 378 MGGGSRKDSPPSAPATD 328
MGGGSRKDSPPSA ATD
Sbjct: 269 MGGGSRKDSPPSAAATD 319
Score = 33.6 bits (67), Expect(5) = 2e-033
Identities = 16/21 (76%), Positives = 17/21 (80%)
Frame = -3 / +1
Query: 282 FLRVYDSCSSLWICD*KAALQ 220
F VYDS S+L ICD*KAALQ
Sbjct: 397 FSWVYDSYSTL*ICD*KAALQ 459
Score = 28.1 bits (55), Expect(4) = 3e-061
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = -2 / +2
Query: 214 NVWAVVVHLAFPKSSMYFFYR 152
NVWAVV FP+ +FYR
Sbjct: 461 NVWAVVHT*FFPEQQSMYFYR 523
Score = 25.4 bits (49), Expect(5) = 2e-033
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -2 / +1
Query: 193 HLAFPKSSMYFFYRAFGY 140
HL FP ++ + F AFGY
Sbjct: 481 HLVFP*TAEHVFLSAFGY 534
>gb|CF427951.1|CF427951 PH1_11_F08.g1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_11_F08_A002 5', mRNA sequence
Length = 623
Score = 138 bits (296), Expect(3) = 1e-060
Identities = 54/65 (83%), Positives = 58/65 (89%)
Frame = -2 / -3
Query: 712 PTSILFKVDDLFIRSFKRYADLPYPSSRPMTLHATLWDGSYWATEKGRVGIDWSDAPFVV 533
PT+ILFKVDD IR FKRYADL YPSS+PMTLHATLWDGSYWATEKG+V IDWS APFVV
Sbjct: 621 PTNILFKVDDNVIRVFKRYADLAYPSSKPMTLHATLWDGSYWATEKGKVPIDWSGAPFVV 442
Query: 532 SYRSY 518
SY+ Y
Sbjct: 441 SYKGY 427
Score = 111 bits (238), Expect(2) = 1e-042
Identities = 55/71 (77%), Positives = 56/71 (78%)
Frame = +3 / +2
Query: 501 TQXXXXXXR*ETTKGASDQSMPTLPFSVAQ*LPSHSVACSVMGLELGYGRSA*RLKERMK 680
TQ *ETTKGA DQSM TLPFSVAQ*LPSHSVACSVMGLELG RSA*RLK R+
Sbjct: 410 TQASAE*PL*ETTKGAPDQSMGTLPFSVAQ*LPSHSVACSVMGLELG*ARSA*RLKTRIT 589
Query: 681 RSSTLNRMLVG 713
SSTL RMLVG
Sbjct: 590 LSSTLKRMLVG 622
Score = 109 bits (232), Expect(3) = 1e-060
Identities = 38/48 (79%), Positives = 43/48 (89%)
Frame = -2 / -3
Query: 463 WMNRQLDSAEWGTVRWAERNFMRYNYCQDGWRFPQGLPAECARH*YAS 320
WMN+Q DSAEWGTV+WAE N+MRYNYC DGWRFPQGLPAEC+R *+ S
Sbjct: 375 WMNKQPDSAEWGTVKWAESNYMRYNYCDDGWRFPQGLPAECSRS*FNS 232
Score = 94.1 bits (199), Expect(2) = 1e-032
Identities = 42/53 (79%), Positives = 43/53 (81%)
Frame = +2 / +1
Query: 554 PVDADPALLGGPVAAVPQRGVQRHGPGARVRQVGVALEGADEEVVDLEQDAGR 712
PVD ALLGGPVAAVPQRGVQRHG GARV QVGVALE AD VV LE+D GR
Sbjct: 463 PVDGHLALLGGPVAAVPQRGVQRHGLGARVGQVGVALEDADHVVVHLEEDVGR 621
Score = 83.1 bits (175), Expect(2) = 1e-042
Identities = 37/44 (84%), Positives = 37/44 (84%)
Frame = +3 / +2
Query: 330 QWRAHSAGSPCGNLHPSWQ*L*RMKLRSAHLTVPHSALSSCLFI 461
Q R HSAGSPCGNL PS Q*L*RM L SAHLTVPHSALS CLFI
Sbjct: 242 QLRLHSAGSPCGNLQPSSQ*L*RM*LLSAHLTVPHSALSGCLFI 373
Score = 82.2 bits (173), Expect(3) = 9e-028
Identities = 34/42 (80%), Positives = 36/42 (85%)
Frame = -1 / -2
Query: 698 VQGRRPLHPLLQALRRPAVPELQAHDAARHAVGRQLLGHREG 573
+QG R P LQALRRP +PELQAHDAARHAVGRQLLGHREG
Sbjct: 607 LQGGRQRDPRLQALRRPGLPELQAHDAARHAVGRQLLGHREG 482
Score = 67.0 bits (140), Expect(2) = 1e-032
Identities = 30/44 (68%), Positives = 34/44 (77%)
Frame = +2 / +1
Query: 329 SVAGALGGESLREPPPILAVVVAHEVALRPPDGAPLGAVKLPVH 460
S A AL + LREPP ++AVVVAH VAL P DGAPLGAV+L VH
Sbjct: 241 SAAAALRRQPLREPPAVVAVVVAHVVALGPLDGAPLGAVRLLVH 372
Score = 56.5 bits (117), Expect(3) = 9e-028
Identities = 25/27 (92%), Positives = 25/27 (92%)
Frame = -1 / -2
Query: 464 VDEQAA*QRRVGHRQVGGAQLHALQLL 384
VDEQAA*QRRVGHRQVG QLHALQLL
Sbjct: 376 VDEQAA*QRRVGHRQVGREQLHALQLL 296
Score = 25.8 bits (50), Expect(3) = 1e-060
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = -1 / -1
Query: 302 FVGYSFFFYGYMILALLCGFVIKKQPCS*QRVG 204
F+ + + +++ LL FVI+KQP S R G
Sbjct: 164 FIFAGYIYISMILVLLL*IFVIEKQPRSNARAG 66
Score = 24.0 bits (46), Expect(3) = 9e-028
Identities = 9/31 (29%), Positives = 15/31 (48%)
Frame = -3 / -3
Query: 348 PSAPATDMRPPVNSLFCWVFFFFLRVYDSCS 256
PS RP + + + ++ +YDSCS
Sbjct: 213 PSFQTQFRRPLLPKFLIYFCWIYIYIYDSCS 121
>gb|BE355210.1|BE355210 DG1_10_F11.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 622
Score = 132 bits (283), Expect(3) = 8e-059
Identities = 52/62 (83%), Positives = 55/62 (88%)
Frame = -2 / +3
Query: 703 ILFKVDDLFIRSFKRYADLPYPSSRPMTLHATLWDGSYWATEKGRVGIDWSDAPFVVSYR 524
ILFKVDD IR FKRYADL YPSS+PMTLHATLWDGSYWATEKG+V IDWS APFVVSY+
Sbjct: 3 ILFKVDDNVIRVFKRYADLAYPSSKPMTLHATLWDGSYWATEKGKVPIDWSGAPFVVSYK 182
Query: 523 SY 518
Y
Sbjct: 183 GY 188
Score = 109 bits (232), Expect(3) = 8e-059
Identities = 38/48 (79%), Positives = 43/48 (89%)
Frame = -2 / +3
Query: 463 WMNRQLDSAEWGTVRWAERNFMRYNYCQDGWRFPQGLPAECARH*YAS 320
WMN+Q DSAEWGTV+WAE N+MRYNYC DGWRFPQGLPAEC+R *+ S
Sbjct: 240 WMNKQPDSAEWGTVKWAESNYMRYNYCDDGWRFPQGLPAECSRS*FNS 383
Score = 105 bits (224), Expect(2) = 9e-041
Identities = 52/68 (76%), Positives = 53/68 (77%)
Frame = +3 / -1
Query: 501 TQXXXXXXR*ETTKGASDQSMPTLPFSVAQ*LPSHSVACSVMGLELGYGRSA*RLKERMK 680
TQ *ETTKGA DQSM TLPFSVAQ*LPSHSVACSVMGLELG RSA*RLK R+
Sbjct: 205 TQASAE*PL*ETTKGAPDQSMGTLPFSVAQ*LPSHSVACSVMGLELG*ARSA*RLKTRIT 26
Query: 681 RSSTLNRM 704
SSTL RM
Sbjct: 25 LSSTLKRM 2
Score = 89.0 bits (188), Expect(2) = 4e-031
Identities = 40/50 (80%), Positives = 41/50 (82%)
Frame = +2 / -3
Query: 554 PVDADPALLGGPVAAVPQRGVQRHGPGARVRQVGVALEGADEEVVDLEQD 703
PVD ALLGGPVAAVPQRGVQRHG GARV QVGVALE AD VV LE+D
Sbjct: 152 PVDGHLALLGGPVAAVPQRGVQRHGLGARVGQVGVALEDADHVVVHLEED 3
Score = 83.1 bits (175), Expect(2) = 9e-041
Identities = 37/44 (84%), Positives = 37/44 (84%)
Frame = +3 / -1
Query: 330 QWRAHSAGSPCGNLHPSWQ*L*RMKLRSAHLTVPHSALSSCLFI 461
Q R HSAGSPCGNL PS Q*L*RM L SAHLTVPHSALS CLFI
Sbjct: 373 QLRLHSAGSPCGNLQPSSQ*L*RM*LLSAHLTVPHSALSGCLFI 242
Score = 82.2 bits (173), Expect(3) = 9e-028
Identities = 34/42 (80%), Positives = 36/42 (85%)
Frame = -1 / +2
Query: 698 VQGRRPLHPLLQALRRPAVPELQAHDAARHAVGRQLLGHREG 573
+QG R P LQALRRP +PELQAHDAARHAVGRQLLGHREG
Sbjct: 8 LQGGRQRDPRLQALRRPGLPELQAHDAARHAVGRQLLGHREG 133
Score = 67.0 bits (140), Expect(2) = 4e-031
Identities = 30/44 (68%), Positives = 34/44 (77%)
Frame = +2 / -3
Query: 329 SVAGALGGESLREPPPILAVVVAHEVALRPPDGAPLGAVKLPVH 460
S A AL + LREPP ++AVVVAH VAL P DGAPLGAV+L VH
Sbjct: 374 SAAAALRRQPLREPPAVVAVVVAHVVALGPLDGAPLGAVRLLVH 243
Score = 56.5 bits (117), Expect(3) = 9e-028
Identities = 25/27 (92%), Positives = 25/27 (92%)
Frame = -1 / +2
Query: 464 VDEQAA*QRRVGHRQVGGAQLHALQLL 384
VDEQAA*QRRVGHRQVG QLHALQLL
Sbjct: 239 VDEQAA*QRRVGHRQVGREQLHALQLL 319
Score = 25.8 bits (50), Expect(3) = 8e-059
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = -1 / +1
Query: 302 FVGYSFFFYGYMILALLCGFVIKKQPCS*QRVG 204
F+ + + +++ LL FVI+KQP S R G
Sbjct: 451 FIFAGYIYISMILVLLL*IFVIEKQPRSNARAG 549
Score = 24.0 bits (46), Expect(3) = 9e-028
Identities = 9/31 (29%), Positives = 15/31 (48%)
Frame = -3 / +3
Query: 348 PSAPATDMRPPVNSLFCWVFFFFLRVYDSCS 256
PS RP + + + ++ +YDSCS
Sbjct: 402 PSFQTQFRRPLLPKFLIYFCWIYIYIYDSCS 494
>gb|CD428029.1|CD428029 ETH1_32_H05.b1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_32_H05_A002 3', mRNA sequence
Length = 599
Score = 134 bits (288), Expect(3) = 2e-058
Identities = 53/65 (81%), Positives = 57/65 (87%)
Frame = -2 / +3
Query: 712 PTSILFKVDDLFIRSFKRYADLPYPSSRPMTLHATLWDGSYWATEKGRVGIDWSDAPFVV 533
PT+ILFKVDD IR KRYADL YPSS+PMTLHATLWDGSYWATEKG+V IDWS APFVV
Sbjct: 3 PTNILFKVDDNVIRVSKRYADLAYPSSKPMTLHATLWDGSYWATEKGKVPIDWSGAPFVV 182
Query: 532 SYRSY 518
SY+ Y
Sbjct: 183 SYKGY 197
Score = 110 bits (234), Expect(2) = 2e-041
Identities = 54/71 (76%), Positives = 56/71 (78%)
Frame = +3 / -2
Query: 501 TQXXXXXXR*ETTKGASDQSMPTLPFSVAQ*LPSHSVACSVMGLELGYGRSA*RLKERMK 680
TQ *ETTKGA DQSM TLPFSVAQ*LPSHSVACSVMGLELG RSA*RL+ R+
Sbjct: 214 TQASAE*PL*ETTKGAPDQSMGTLPFSVAQ*LPSHSVACSVMGLELG*ARSA*RLETRIT 35
Query: 681 RSSTLNRMLVG 713
SSTL RMLVG
Sbjct: 34 LSSTLKRMLVG 2
Score = 107 bits (228), Expect(3) = 2e-058
Identities = 37/48 (77%), Positives = 42/48 (87%)
Frame = -2 / +3
Query: 463 WMNRQLDSAEWGTVRWAERNFMRYNYCQDGWRFPQGLPAECARH*YAS 320
WMN+Q DSAEWGT +WAE N+MRYNYC DGWRFPQGLPAEC+R *+ S
Sbjct: 249 WMNKQPDSAEWGTAKWAESNYMRYNYCDDGWRFPQGLPAECSRS*FNS 392
Score = 90.9 bits (192), Expect(2) = 1e-030
Identities = 41/53 (77%), Positives = 42/53 (79%)
Frame = +2 / -1
Query: 554 PVDADPALLGGPVAAVPQRGVQRHGPGARVRQVGVALEGADEEVVDLEQDAGR 712
PVD ALLGGPVAAVPQRGVQRHG GARV QVGVAL AD VV LE+D GR
Sbjct: 161 PVDGHLALLGGPVAAVPQRGVQRHGLGARVGQVGVALGDADHVVVHLEEDVGR 3
Score = 82.2 bits (173), Expect(3) = 9e-028
Identities = 34/42 (80%), Positives = 36/42 (85%)
Frame = -1 / +2
Query: 698 VQGRRPLHPLLQALRRPAVPELQAHDAARHAVGRQLLGHREG 573
+QG R P LQALRRP +PELQAHDAARHAVGRQLLGHREG
Sbjct: 17 LQGGRQRDPRLQALRRPGLPELQAHDAARHAVGRQLLGHREG 142
Score = 80.8 bits (170), Expect(2) = 2e-041
Identities = 36/44 (81%), Positives = 36/44 (81%)
Frame = +3 / -2
Query: 330 QWRAHSAGSPCGNLHPSWQ*L*RMKLRSAHLTVPHSALSSCLFI 461
Q R HSAGSPCGNL PS Q*L*RM L SAHL VPHSALS CLFI
Sbjct: 382 QLRLHSAGSPCGNLQPSSQ*L*RM*LLSAHLAVPHSALSGCLFI 251
Score = 63.8 bits (133), Expect(2) = 1e-030
Identities = 29/44 (65%), Positives = 33/44 (75%)
Frame = +2 / -1
Query: 329 SVAGALGGESLREPPPILAVVVAHEVALRPPDGAPLGAVKLPVH 460
S A AL + LREPP ++AVVVAH VAL P GAPLGAV+L VH
Sbjct: 383 SAAAALRRQPLREPPAVVAVVVAHVVALGPLGGAPLGAVRLLVH 252
Score = 56.5 bits (117), Expect(3) = 9e-028
Identities = 25/27 (92%), Positives = 25/27 (92%)
Frame = -1 / +2
Query: 464 VDEQAA*QRRVGHRQVGGAQLHALQLL 384
VDEQAA*QRRVGHRQVG QLHALQLL
Sbjct: 248 VDEQAA*QRRVGHRQVGREQLHALQLL 328
Score = 24.0 bits (46), Expect(3) = 2e-058
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = -1 / +1
Query: 302 FVGYSFFFYGYMILALLCGFVIKKQPCS*QRVG 204
F+ + + +++ LL FVI+K+P S R G
Sbjct: 460 FIFAGYIYISMILVLLL*IFVIEKRPRSNARAG 558
Score = 24.0 bits (46), Expect(3) = 9e-028
Identities = 9/31 (29%), Positives = 15/31 (48%)
Frame = -3 / +3
Query: 348 PSAPATDMRPPVNSLFCWVFFFFLRVYDSCS 256
PS RP + + + ++ +YDSCS
Sbjct: 411 PSFQTQFRRPLLPKFLIYFCWIYIYIYDSCS 503
>gb|BZ779778.1|BZ779778 ii34e07.b1 WGS-SbicolorF (DH5a methyl filtered) Sorghum bicolor
genomic clone ii34e07, DNA sequence
Length = 647
Score = 118 bits (252), Expect(5) = 6e-058
Identities = 41/45 (91%), Positives = 45/45 (100%)
Frame = -2 / -1
Query: 463 WMNRQLDSAEWGTVRWAERNFMRYNYCQDGWRFPQGLPAECARH* 329
WM+RQLD+AEWGTVRWAE+NFMRYNYCQDGWRFPQGLPAEC+RH*
Sbjct: 383 WMHRQLDNAEWGTVRWAEKNFMRYNYCQDGWRFPQGLPAECSRH* 249
Score = 100 bits (212), Expect(4) = 2e-049
Identities = 40/45 (88%), Positives = 41/45 (91%)
Frame = +3 / +1
Query: 327 YQWRAHSAGSPCGNLHPSWQ*L*RMKLRSAHLTVPHSALSSCLFI 461
+QWR HSAGSPCGNLHPSWQ*L*RMK SAHLTVPHSALSSCL I
Sbjct: 247 HQWRLHSAGSPCGNLHPSWQ*L*RMKFFSAHLTVPHSALSSCLCI 381
Score = 96.4 bits (204), Expect(4) = 7e-043
Identities = 40/44 (90%), Positives = 41/44 (93%)
Frame = +2 / +3
Query: 329 SVAGALGGESLREPPPILAVVVAHEVALRPPDGAPLGAVKLPVH 460
SVA ALGGESLREPPPILAVVVAHEV LRPPDGAPLG V+LPVH
Sbjct: 249 SVAAALGGESLREPPPILAVVVAHEVLLRPPDGAPLGVVELPVH 380
Score = 84.0 bits (177), Expect(5) = 6e-058
Identities = 33/37 (89%), Positives = 36/37 (97%)
Frame = -2 / -3
Query: 727 TIIWNPTSILFKVDDLFIRSFKRYADLPYPSSRPMTL 617
TIIWNPT+ILFKVD+LFIRSFKRYADL YPSS+PMTL
Sbjct: 645 TIIWNPTNILFKVDNLFIRSFKRYADLAYPSSKPMTL 535
Score = 78.0 bits (164), Expect(4) = 1e-038
Identities = 30/43 (69%), Positives = 34/43 (79%)
Frame = -2 / -1
Query: 646 PYPSSRPMTLHATLWDGSYWATEKGRVGIDWSDAPFVVSYRSY 518
P + P +ATLWDGSYWATEKG++ IDWS APFVVSYRSY
Sbjct: 563 PTRAPSP*RCNATLWDGSYWATEKGKMPIDWSGAPFVVSYRSY 435
Score = 73.9 bits (155), Expect(4) = 2e-049
Identities = 33/38 (86%), Positives = 34/38 (89%)
Frame = +3 / +2
Query: 615 CSVMGLELGYGRSA*RLKERMKRSSTLNRMLVGFQMMV 728
CSVMGLELG RSA*RLK+RMKR STLNRM VGFQMMV
Sbjct: 533 CSVMGLELG*ARSA*RLKDRMKRLSTLNRMFVGFQMMV 646
Score = 72.1 bits (151), Expect(3) = 2e-029
Identities = 31/38 (81%), Positives = 32/38 (84%)
Frame = +2 / +1
Query: 614 VQRHGPGARVRQVGVALEGADEEVVDLEQDAGRVPDDG 727
+QRHG GARV QVGVALEG DEEVV LEQD RVPDDG
Sbjct: 532 LQRHGLGARVGQVGVALEGPDEEVVHLEQDVRRVPDDG 645
Score = 67.5 bits (141), Expect(3) = 2e-029
Identities = 29/42 (69%), Positives = 30/42 (71%)
Frame = +1 / +2
Query: 328 ISGGRTRRGVLAGTSTHPGXXXXXXXXXXXT*RCPTRRCQAA 453
ISGG TRRGVLAGTSTHPG T*RCPTRRC+AA
Sbjct: 248 ISGGCTRRGVLAGTSTHPGSSCSA*SSSPPT*RCPTRRCRAA 373
Score = 64.8 bits (135), Expect(4) = 1e-038
Identities = 26/30 (86%), Positives = 27/30 (90%)
Frame = -1 / -3
Query: 464 VDEQAA*QRRVGHRQVGGAQLHALQLLPGW 375
VD QAA QRRVGHRQVGG +LHALQLLPGW
Sbjct: 384 VDAQAARQRRVGHRQVGGEELHALQLLPGW 295
Score = 62.9 bits (131), Expect(4) = 7e-043
Identities = 32/50 (64%), Positives = 33/50 (66%)
Frame = +3 / +1
Query: 501 TQXXXXXXR*ETTKGASDQSMPTLPFSVAQ*LPSHSVACSVMGLELGYGR 650
TQ R*ETTKGA DQSM LPFSVAQ*LPSHSVA GL G+
Sbjct: 418 TQALAA*LR*ETTKGAPDQSMGILPFSVAQ*LPSHSVALQRHGLGARVGQ 567
Score = 45.5 bits (93), Expect(5) = 6e-058
Identities = 18/22 (81%), Positives = 18/22 (81%)
Frame = -1 / -2
Query: 287 FFFYGYMILALLCGFVIKKQPC 222
F F GYMIL LLC FVIKKQPC
Sbjct: 175 FRFLGYMILILLCEFVIKKQPC 110
Score = 44.6 bits (91), Expect(4) = 2e-049
Identities = 19/36 (52%), Positives = 24/36 (66%)
Frame = +2 / +1
Query: 203 RPHVASCRAAF*SQIHKEEQESYTRRKKKNTQQNKE 310
+P CRAAF*SQIHK E ESYT+ + N N++
Sbjct: 91 QPPTRFCRAAF*SQIHKVE*ESYTQENETNAINNEQ 198
Score = 43.2 bits (88), Expect(4) = 7e-043
Identities = 17/24 (70%), Positives = 19/24 (79%)
Frame = +1 / +3
Query: 220 LQGCFLITNPQRRARIIYP*KKKE 291
LQGCFLITN Q R RIIYP K+ +
Sbjct: 108 LQGCFLITNSQSRIRIIYPRKRNQ 179
Score = 40.9 bits (83), Expect(4) = 1e-038
Identities = 16/17 (94%), Positives = 16/17 (94%)
Frame = -3 / -2
Query: 378 MGGGSRKDSPPSAPATD 328
MGGGSRKDSPPSA ATD
Sbjct: 298 MGGGSRKDSPPSAAATD 248
Score = 35.4 bits (71), Expect(4) = 2e-049
Identities = 16/21 (76%), Positives = 16/21 (76%)
Frame = +2 / +3
Query: 554 PVDADPALLGGPVAAVPQRGV 616
PVD ALL PVAAVPQRGV
Sbjct: 471 PVDGHLALLRRPVAAVPQRGV 533
Score = 33.6 bits (67), Expect(4) = 1e-038
Identities = 16/21 (76%), Positives = 17/21 (80%)
Frame = -3 / -1
Query: 282 FLRVYDSCSSLWICD*KAALQ 220
F VYDS S+L ICD*KAALQ
Sbjct: 170 FSWVYDSYSTL*ICD*KAALQ 108
Score = 33.1 bits (66), Expect(5) = 6e-058
Identities = 13/15 (86%), Positives = 13/15 (86%)
Frame = -3 / -2
Query: 615 TPRCGTAATGPPRRA 571
TPRCGTAATG RRA
Sbjct: 532 TPRCGTAATGRRRRA 488
Score = 31.8 bits (63), Expect(3) = 2e-029
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +3 / +2
Query: 234 FNHKSTKKSKNHIPVEKK 287
FNHK TK +KNHIP + K
Sbjct: 122 FNHKFTK*NKNHIPKKTK 175
Score = 29.0 bits (57), Expect(4) = 7e-043
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = +1 / +3
Query: 691 P*TGCWSGSR*WC 729
P*TGC GSR*WC
Sbjct: 609 P*TGCS*GSR*WC 647
Score = 21.7 bits (41), Expect(5) = 6e-058
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -2 / -3
Query: 160 FYRAFGY 140
FYRAFGY
Sbjct: 51 FYRAFGY 31
>gb|CF429943.1|CF429943 PH1_25_F09.b1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_25_F09_A002 3', mRNA sequence
Length = 604
Score = 126 bits (269), Expect(3) = 7e-057
Identities = 49/59 (83%), Positives = 52/59 (88%)
Frame = -2 / +3
Query: 694 KVDDLFIRSFKRYADLPYPSSRPMTLHATLWDGSYWATEKGRVGIDWSDAPFVVSYRSY 518
KVDD IR FKRYADL YPSS+PMTLHATLWDGSYWATEKG+V IDWS APFVVSY+ Y
Sbjct: 3 KVDDNVIRVFKRYADLAYPSSKPMTLHATLWDGSYWATEKGKVPIDWSGAPFVVSYKGY 179
Score = 109 bits (232), Expect(3) = 7e-057
Identities = 38/48 (79%), Positives = 43/48 (89%)
Frame = -2 / +3
Query: 463 WMNRQLDSAEWGTVRWAERNFMRYNYCQDGWRFPQGLPAECARH*YAS 320
WMN+Q DSAEWGTV+WAE N+MRYNYC DGWRFPQGLPAEC+R *+ S
Sbjct: 231 WMNKQPDSAEWGTVKWAESNYMRYNYCDDGWRFPQGLPAECSRS*FNS 374
Score = 100 bits (214), Expect(2) = 2e-039
Identities = 50/65 (76%), Positives = 51/65 (78%)
Frame = +3 / -1
Query: 501 TQXXXXXXR*ETTKGASDQSMPTLPFSVAQ*LPSHSVACSVMGLELGYGRSA*RLKERMK 680
TQ *ETTKGA DQSM TLPFSVAQ*LPSHSVACSVMGLELG RSA*RLK R+
Sbjct: 196 TQASAE*PL*ETTKGAPDQSMGTLPFSVAQ*LPSHSVACSVMGLELG*ARSA*RLKTRIT 17
Query: 681 RSSTL 695
SSTL
Sbjct: 16 LSSTL 2
Score = 83.1 bits (175), Expect(2) = 3e-029
Identities = 38/47 (80%), Positives = 38/47 (80%)
Frame = +2 / -3
Query: 554 PVDADPALLGGPVAAVPQRGVQRHGPGARVRQVGVALEGADEEVVDL 694
PVD ALLGGPVAAVPQRGVQRHG GARV QVGVALE AD VV L
Sbjct: 143 PVDGHLALLGGPVAAVPQRGVQRHGLGARVGQVGVALEDADHVVVHL 3
Score = 83.1 bits (175), Expect(2) = 2e-039
Identities = 37/44 (84%), Positives = 37/44 (84%)
Frame = +3 / -1
Query: 330 QWRAHSAGSPCGNLHPSWQ*L*RMKLRSAHLTVPHSALSSCLFI 461
Q R HSAGSPCGNL PS Q*L*RM L SAHLTVPHSALS CLFI
Sbjct: 364 QLRLHSAGSPCGNLQPSSQ*L*RM*LLSAHLTVPHSALSGCLFI 233
Score = 81.7 bits (172), Expect(3) = 1e-027
Identities = 34/41 (82%), Positives = 35/41 (85%)
Frame = -1 / +2
Query: 695 QGRRPLHPLLQALRRPAVPELQAHDAARHAVGRQLLGHREG 573
QG R P LQALRRP +PELQAHDAARHAVGRQLLGHREG
Sbjct: 2 QGGRQRDPRLQALRRPGLPELQAHDAARHAVGRQLLGHREG 124
Score = 67.0 bits (140), Expect(2) = 3e-029
Identities = 30/44 (68%), Positives = 34/44 (77%)
Frame = +2 / -3
Query: 329 SVAGALGGESLREPPPILAVVVAHEVALRPPDGAPLGAVKLPVH 460
S A AL + LREPP ++AVVVAH VAL P DGAPLGAV+L VH
Sbjct: 365 SAAAALRRQPLREPPAVVAVVVAHVVALGPLDGAPLGAVRLLVH 234
Score = 56.5 bits (117), Expect(3) = 1e-027
Identities = 25/27 (92%), Positives = 25/27 (92%)
Frame = -1 / +2
Query: 464 VDEQAA*QRRVGHRQVGGAQLHALQLL 384
VDEQAA*QRRVGHRQVG QLHALQLL
Sbjct: 230 VDEQAA*QRRVGHRQVGREQLHALQLL 310
Score = 25.8 bits (50), Expect(3) = 7e-057
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = -1 / +1
Query: 302 FVGYSFFFYGYMILALLCGFVIKKQPCS*QRVG 204
F+ + + +++ LL FVI+KQP S R G
Sbjct: 442 FIFAGYIYISMILVLLL*IFVIEKQPRSNARAG 540
Score = 24.0 bits (46), Expect(3) = 1e-027
Identities = 9/31 (29%), Positives = 15/31 (48%)
Frame = -3 / +3
Query: 348 PSAPATDMRPPVNSLFCWVFFFFLRVYDSCS 256
PS RP + + + ++ +YDSCS
Sbjct: 393 PSFQTQFRRPLLPKFLIYFCWIYIYIYDSCS 485
>gb|CF428894.1|CF428894 PH1_18_D09.b1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_18_D09_A002 3', mRNA sequence
Length = 547
Score = 118 bits (252), Expect(4) = 2e-056
Identities = 41/45 (91%), Positives = 45/45 (100%)
Frame = -2 / +3
Query: 463 WMNRQLDSAEWGTVRWAERNFMRYNYCQDGWRFPQGLPAECARH* 329
WM+RQLD+AEWGTVRWAE+NFMRYNYCQDGWRFPQGLPAEC+RH*
Sbjct: 168 WMHRQLDNAEWGTVRWAEKNFMRYNYCQDGWRFPQGLPAECSRH* 302
Score = 100 bits (212), Expect(5) = 7e-047
Identities = 40/45 (88%), Positives = 41/45 (91%)
Frame = +3 / -1
Query: 327 YQWRAHSAGSPCGNLHPSWQ*L*RMKLRSAHLTVPHSALSSCLFI 461
+QWR HSAGSPCGNLHPSWQ*L*RMK SAHLTVPHSALSSCL I
Sbjct: 304 HQWRLHSAGSPCGNLHPSWQ*L*RMKFFSAHLTVPHSALSSCLCI 170
Score = 96.4 bits (204), Expect(3) = 1e-034
Identities = 40/44 (90%), Positives = 41/44 (93%)
Frame = +2 / -3
Query: 329 SVAGALGGESLREPPPILAVVVAHEVALRPPDGAPLGAVKLPVH 460
SVA ALGGESLREPPPILAVVVAHEV LRPPDGAPLG V+LPVH
Sbjct: 302 SVAAALGGESLREPPPILAVVVAHEVLLRPPDGAPLGVVELPVH 171
Score = 90.4 bits (191), Expect(4) = 2e-056
Identities = 33/38 (86%), Positives = 36/38 (94%)
Frame = -2 / +3
Query: 631 RPMTLHATLWDGSYWATEKGRVGIDWSDAPFVVSYRSY 518
+PMTLHATLWDGSYWATEKG++ IDWS APFVVSYRSY
Sbjct: 3 KPMTLHATLWDGSYWATEKGKMPIDWSGAPFVVSYRSY 116
Score = 75.3 bits (158), Expect(5) = 7e-047
Identities = 35/44 (79%), Positives = 35/44 (79%)
Frame = +3 / -1
Query: 501 TQXXXXXXR*ETTKGASDQSMPTLPFSVAQ*LPSHSVACSVMGL 632
TQ R*ETTKGA DQSM LPFSVAQ*LPSHSVACSVMGL
Sbjct: 133 TQALAA*LR*ETTKGAPDQSMGILPFSVAQ*LPSHSVACSVMGL 2
Score = 64.8 bits (135), Expect(4) = 2e-029
Identities = 26/30 (86%), Positives = 27/30 (90%)
Frame = -1 / +2
Query: 464 VDEQAA*QRRVGHRQVGGAQLHALQLLPGW 375
VD QAA QRRVGHRQVGG +LHALQLLPGW
Sbjct: 167 VDAQAARQRRVGHRQVGGEELHALQLLPGW 256
Score = 46.4 bits (95), Expect(3) = 1e-034
Identities = 20/25 (80%), Positives = 20/25 (80%)
Frame = +2 / -3
Query: 554 PVDADPALLGGPVAAVPQRGVQRHG 628
PVD ALL PVAAVPQRGVQRHG
Sbjct: 80 PVDGHLALLRRPVAAVPQRGVQRHG 6
Score = 46.4 bits (95), Expect(4) = 2e-029
Identities = 18/21 (85%), Positives = 18/21 (85%)
Frame = -3 / +1
Query: 633 PGP*RCTPRCGTAATGPPRRA 571
P P*RCTPRCGTAATG RRA
Sbjct: 1 PSP*RCTPRCGTAATGRRRRA 63
Score = 45.5 bits (93), Expect(4) = 2e-056
Identities = 18/22 (81%), Positives = 18/22 (81%)
Frame = -1 / +1
Query: 287 FFFYGYMILALLCGFVIKKQPC 222
F F GYMIL LLC FVIKKQPC
Sbjct: 376 FRFLGYMILILLCEFVIKKQPC 441
Score = 44.6 bits (91), Expect(5) = 7e-047
Identities = 19/36 (52%), Positives = 24/36 (66%)
Frame = +2 / -1
Query: 203 RPHVASCRAAF*SQIHKEEQESYTRRKKKNTQQNKE 310
+P CRAAF*SQIHK E ESYT+ + N N++
Sbjct: 460 QPPTRFCRAAF*SQIHKVE*ESYTQENETNAINNEQ 353
Score = 43.2 bits (88), Expect(3) = 1e-034
Identities = 17/24 (70%), Positives = 19/24 (79%)
Frame = +1 / -3
Query: 220 LQGCFLITNPQRRARIIYP*KKKE 291
LQGCFLITN Q R RIIYP K+ +
Sbjct: 443 LQGCFLITNSQSRIRIIYPRKRNQ 372
Score = 40.9 bits (83), Expect(4) = 2e-029
Identities = 16/17 (94%), Positives = 16/17 (94%)
Frame = -3 / +1
Query: 378 MGGGSRKDSPPSAPATD 328
MGGGSRKDSPPSA ATD
Sbjct: 253 MGGGSRKDSPPSAAATD 303
Score = 33.6 bits (67), Expect(4) = 2e-029
Identities = 16/21 (76%), Positives = 17/21 (80%)
Frame = -3 / +3
Query: 282 FLRVYDSCSSLWICD*KAALQ 220
F VYDS S+L ICD*KAALQ
Sbjct: 381 FSWVYDSYSTL*ICD*KAALQ 443
Score = 23.5 bits (45), Expect(4) = 2e-056
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = -2 / +2
Query: 181 PKSSMYFFYRAFGY 140
P S FYRAFGY
Sbjct: 479 PNSRACNFYRAFGY 520
Score = 22.1 bits (42), Expect(5) = 7e-047
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +3 / -2
Query: 138 LYPKAR*KKYMLDLGK 185
+YPKAR*K + L G+
Sbjct: 522 IYPKAR*KLHALLFGE 475
Score = 21.7 bits (41), Expect(5) = 7e-047
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +1 / -3
Query: 124 YMLHACI 144
YMLHACI
Sbjct: 542 YMLHACI 522
>gb|AW286181.1|AW286181 LG1_328_E01.g1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 513
Score = 132 bits (282), Expect(2) = 1e-055
Identities = 46/62 (74%), Positives = 57/62 (91%)
Frame = -2 / +2
Query: 703 ILFKVDDLFIRSFKRYADLPYPSSRPMTLHATLWDGSYWATEKGRVGIDWSDAPFVVSYR 524
++FKVDDLFIRSFKRY DLPYP +PM++HATLWDGSYWAT++G+V +DWS++PFVVSYR
Sbjct: 2 VIFKVDDLFIRSFKRYRDLPYPGGKPMSVHATLWDGSYWATQQGKVKVDWSNSPFVVSYR 181
Query: 523 SY 518
Y
Sbjct: 182 GY 187
Score = 106 bits (226), Expect(2) = 1e-055
Identities = 36/48 (75%), Positives = 43/48 (89%)
Frame = -2 / +2
Query: 463 WMNRQLDSAEWGTVRWAERNFMRYNYCQDGWRFPQGLPAECARH*YAS 320
WMNRQLD+AEWGTV WA++N+M YNYC DGWRFPQG PAEC+R+* A+
Sbjct: 263 WMNRQLDAAEWGTVAWAKKNYMHYNYCDDGWRFPQGFPAECSRN*SAA 406
Score = 85.4 bits (180), Expect(2) = 1e-034
Identities = 43/65 (66%), Positives = 44/65 (67%)
Frame = +3 / -1
Query: 501 TQXXXXXXR*ETTKGASDQSMPTLPFSVAQ*LPSHSVACSVMGLELGYGRSA*RLKERMK 680
TQ R ETT G DQS T P VAQ*LPSHSVAC+ MG GYGRS *RLK RMK
Sbjct: 204 TQASAV*PRYETTNGELDQSTFTFPCCVAQ*LPSHSVACTDMGFPPGYGRSR*RLKLRMK 25
Query: 681 RSSTL 695
RSSTL
Sbjct: 24 RSSTL 10
Score = 82.6 bits (174), Expect(2) = 1e-034
Identities = 36/72 (50%), Positives = 45/72 (62%)
Frame = +2 / -3
Query: 245 IHKEEQESYTRRKKKNTQQNKELTGGRISVAGALGGESLREPPPILAVVVAHEVALRPPD 424
+H+ E + + + + SV+GALGGESLREPPPI+AVVV H V L P D
Sbjct: 481 VHQSRTEVTKNKHESRRRTGSKNNNSSRSVSGALGGESLREPPPIVAVVVVHVVLLCPRD 302
Query: 425 GAPLGAVKLPVH 460
GAPLG V+L VH
Sbjct: 301 GAPLGGVELAVH 266
Score = 71.2 bits (149), Expect(2) = 5e-026
Identities = 34/50 (68%), Positives = 35/50 (70%)
Frame = +2 / -3
Query: 554 PVDADPALLGGPVAAVPQRGVQRHGPGARVRQVGVALEGADEEVVDLEQD 703
PV LL PVAAVPQRGV RHG A VRQ+ VALE DEEVVDLE D
Sbjct: 151 PVHLHLPLLRCPVAAVPQRGVHRHGLPAGVRQITVALEAPDEEVVDLEDD 2
Score = 68.0 bits (142), Expect(2) = 5e-026
Identities = 32/46 (69%), Positives = 34/46 (73%)
Frame = +3 / -1
Query: 324 AYQWRAHSAGSPCGNLHPSWQ*L*RMKLRSAHLTVPHSALSSCLFI 461
A Q+R HSAG+PCGNLHPS Q*L* M AH TVPHSA SS FI
Sbjct: 402 ADQFREHSAGNPCGNLHPSSQ*L*CM*FFFAHATVPHSAASSWRFI 265
Score = 66.6 bits (139), Expect(3) = 4e-025
Identities = 29/42 (69%), Positives = 32/42 (76%)
Frame = -1 / +1
Query: 698 VQGRRPLHPLLQALRRPAVPELQAHDAARHAVGRQLLGHREG 573
+QGRRPLHP LQAL AVP +AH ARHAVGRQLLG+ G
Sbjct: 7 LQGRRPLHPELQALP*SAVPRREAHVGARHAVGRQLLGNAAG 132
Score = 47.3 bits (97), Expect(3) = 4e-025
Identities = 20/30 (66%), Positives = 23/30 (76%)
Frame = -1 / +1
Query: 464 VDEQAA*QRRVGHRQVGGAQLHALQLLPGW 375
VDE A +RRVGHR+VG +LHALQLL W
Sbjct: 262 VDEPPARRRRVGHRRVGKEELHALQLLRRW 351
Score = 41.8 bits (85), Expect(3) = 4e-025
Identities = 15/18 (83%), Positives = 17/18 (94%)
Frame = -3 / +3
Query: 378 MGGGSRKDSPPSAPATDM 325
MGGGSR+DSPPSAP TD+
Sbjct: 348 MGGGSRRDSPPSAPETDL 401
>gb|BG465900.1|BG465900 RHIZ2_46_A05.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 549
Score = 130 bits (279), Expect(2) = 3e-055
Identities = 46/61 (75%), Positives = 56/61 (91%)
Frame = -2 / +2
Query: 700 LFKVDDLFIRSFKRYADLPYPSSRPMTLHATLWDGSYWATEKGRVGIDWSDAPFVVSYRS 521
+FKVDDLFIRSFKRY DLPYP +PM++HATLWDGSYWAT++G+V +DWS++PFVVSYR
Sbjct: 2 IFKVDDLFIRSFKRYRDLPYPGGKPMSVHATLWDGSYWATQQGKVKVDWSNSPFVVSYRG 181
Query: 520 Y 518
Y
Sbjct: 182 Y 184
Score = 106 bits (226), Expect(2) = 3e-055
Identities = 36/48 (75%), Positives = 43/48 (89%)
Frame = -2 / +2
Query: 463 WMNRQLDSAEWGTVRWAERNFMRYNYCQDGWRFPQGLPAECARH*YAS 320
WMNRQLD+AEWGTV WA++N+M YNYC DGWRFPQG PAEC+R+* A+
Sbjct: 260 WMNRQLDAAEWGTVAWAKKNYMHYNYCDDGWRFPQGFPAECSRN*SAT 403
Score = 86.8 bits (183), Expect(2) = 3e-036
Identities = 43/65 (66%), Positives = 44/65 (67%)
Frame = +3 / -1
Query: 501 TQXXXXXXR*ETTKGASDQSMPTLPFSVAQ*LPSHSVACSVMGLELGYGRSA*RLKERMK 680
TQ R ETT G DQS T P VAQ*LPSHSVAC+ MG GYGRS *RLK RMK
Sbjct: 201 TQASAVYPRYETTNGELDQSTFTFPCCVAQ*LPSHSVACTDMGFPPGYGRSR*RLKLRMK 22
Query: 681 RSSTL 695
RSSTL
Sbjct: 21 RSSTL 7
Score = 86.8 bits (183), Expect(2) = 3e-036
Identities = 37/69 (53%), Positives = 47/69 (68%)
Frame = +2 / -3
Query: 254 EEQESYTRRKKKNTQQNKELTGGRISVAGALGGESLREPPPILAVVVAHEVALRPPDGAP 433
+ + T+ K ++ +Q + SV+GALGGESLREPPPI+AVVV H V L P DGAP
Sbjct: 469 QSRTEVTKNKHESKEQESKNNNSSRSVSGALGGESLREPPPIVAVVVVHVVLLGPRDGAP 290
Query: 434 LGAVKLPVH 460
LG V+L VH
Sbjct: 289 LGGVELAVH 263
Score = 72.5 bits (152), Expect(2) = 2e-026
Identities = 34/48 (70%), Positives = 35/48 (72%)
Frame = +2 / -3
Query: 554 PVDADPALLGGPVAAVPQRGVQRHGPGARVRQVGVALEGADEEVVDLE 697
PV LL GPVAAVPQRGV RHG A VRQ+ VALE DEEVVDLE
Sbjct: 148 PVHLHLPLLRGPVAAVPQRGVHRHGLPAGVRQITVALEAPDEEVVDLE 5
Score = 69.8 bits (146), Expect(3) = 5e-026
Identities = 30/42 (71%), Positives = 32/42 (76%)
Frame = -1 / +1
Query: 698 VQGRRPLHPLLQALRRPAVPELQAHDAARHAVGRQLLGHREG 573
+QGRRPLHP LQAL AVP +AH ARHAVGRQLLGH G
Sbjct: 4 LQGRRPLHPELQALP*SAVPRREAHVGARHAVGRQLLGHAAG 129
Score = 68.0 bits (142), Expect(2) = 2e-026
Identities = 32/46 (69%), Positives = 34/46 (73%)
Frame = +3 / -1
Query: 324 AYQWRAHSAGSPCGNLHPSWQ*L*RMKLRSAHLTVPHSALSSCLFI 461
A Q+R HSAG+PCGNLHPS Q*L* M AH TVPHSA SS FI
Sbjct: 399 ADQFREHSAGNPCGNLHPSSQ*L*CM*FFLAHATVPHSAASSWRFI 262
Score = 47.3 bits (97), Expect(3) = 5e-026
Identities = 20/30 (66%), Positives = 23/30 (76%)
Frame = -1 / +1
Query: 464 VDEQAA*QRRVGHRQVGGAQLHALQLLPGW 375
VDE A +RRVGHR+VG +LHALQLL W
Sbjct: 259 VDEPPARRRRVGHRRVGQEELHALQLLRRW 348
Score = 41.8 bits (85), Expect(3) = 5e-026
Identities = 15/18 (83%), Positives = 17/18 (94%)
Frame = -3 / +3
Query: 378 MGGGSRKDSPPSAPATDM 325
MGGGSR+DSPPSAP TD+
Sbjct: 345 MGGGSRRDSPPSAPETDL 398
>gb|BG559972.1|BG559972 RHIZ2_75_H09.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 538
Score = 122 bits (262), Expect(2) = 6e-053
Identities = 43/57 (75%), Positives = 52/57 (91%)
Frame = -2 / +3
Query: 688 DDLFIRSFKRYADLPYPSSRPMTLHATLWDGSYWATEKGRVGIDWSDAPFVVSYRSY 518
DDLFIRSFKRY DLPYP +PM++HATLWDGSYWAT++G+V +DWS++PFVVSYR Y
Sbjct: 3 DDLFIRSFKRYRDLPYPGGKPMSVHATLWDGSYWATQQGKVKVDWSNSPFVVSYRGY 173
Score = 106 bits (226), Expect(2) = 6e-053
Identities = 36/48 (75%), Positives = 43/48 (89%)
Frame = -2 / +3
Query: 463 WMNRQLDSAEWGTVRWAERNFMRYNYCQDGWRFPQGLPAECARH*YAS 320
WMNRQLD+AEWGTV WA++N+M YNYC DGWRFPQG PAEC+R+* A+
Sbjct: 249 WMNRQLDAAEWGTVAWAKKNYMHYNYCDDGWRFPQGFPAECSRN*SAT 392
Score = 86.8 bits (183), Expect(2) = 5e-035
Identities = 37/69 (53%), Positives = 47/69 (68%)
Frame = +2 / -3
Query: 254 EEQESYTRRKKKNTQQNKELTGGRISVAGALGGESLREPPPILAVVVAHEVALRPPDGAP 433
+ + T+ K ++ +Q + SV+GALGGESLREPPPI+AVVV H V L P DGAP
Sbjct: 458 QSRTEVTKNKHESKEQESKNNNSSRSVSGALGGESLREPPPIVAVVVVHVVLLGPRDGAP 279
Query: 434 LGAVKLPVH 460
LG V+L VH
Sbjct: 278 LGGVELAVH 252
Score = 82.6 bits (174), Expect(2) = 5e-035
Identities = 41/63 (65%), Positives = 42/63 (66%)
Frame = +3 / -1
Query: 501 TQXXXXXXR*ETTKGASDQSMPTLPFSVAQ*LPSHSVACSVMGLELGYGRSA*RLKERMK 680
TQ R ETT G DQS T P VAQ*LPSHSVAC+ MG GYGRS *RLK RMK
Sbjct: 190 TQASAVYPRYETTNGELDQSTFTFPCCVAQ*LPSHSVACTDMGFPPGYGRSR*RLKLRMK 11
Query: 681 RSS 689
RSS
Sbjct: 10 RSS 2
Score = 68.0 bits (142), Expect(2) = 2e-024
Identities = 32/46 (69%), Positives = 34/46 (73%)
Frame = +3 / -1
Query: 324 AYQWRAHSAGSPCGNLHPSWQ*L*RMKLRSAHLTVPHSALSSCLFI 461
A Q+R HSAG+PCGNLHPS Q*L* M AH TVPHSA SS FI
Sbjct: 388 ADQFREHSAGNPCGNLHPSSQ*L*CM*FFLAHATVPHSAASSWRFI 251
Score = 65.7 bits (137), Expect(2) = 2e-024
Identities = 31/45 (68%), Positives = 32/45 (71%)
Frame = +2 / -3
Query: 554 PVDADPALLGGPVAAVPQRGVQRHGPGARVRQVGVALEGADEEVV 688
PV LL GPVAAVPQRGV RHG A VRQ+ VALE DEEVV
Sbjct: 137 PVHLHLPLLRGPVAAVPQRGVHRHGLPAGVRQITVALEAPDEEVV 3
Score = 64.3 bits (134), Expect(3) = 2e-024
Identities = 28/39 (71%), Positives = 29/39 (74%)
Frame = -1 / +2
Query: 689 RRPLHPLLQALRRPAVPELQAHDAARHAVGRQLLGHREG 573
RRPLHP LQAL AVP +AH ARHAVGRQLLGH G
Sbjct: 2 RRPLHPELQALP*SAVPRREAHVGARHAVGRQLLGHAAG 118
Score = 47.3 bits (97), Expect(3) = 2e-024
Identities = 20/30 (66%), Positives = 23/30 (76%)
Frame = -1 / +2
Query: 464 VDEQAA*QRRVGHRQVGGAQLHALQLLPGW 375
VDE A +RRVGHR+VG +LHALQLL W
Sbjct: 248 VDEPPARRRRVGHRRVGQEELHALQLLRRW 337
Score = 41.8 bits (85), Expect(3) = 2e-024
Identities = 15/18 (83%), Positives = 17/18 (94%)
Frame = -3 / +1
Query: 378 MGGGSRKDSPPSAPATDM 325
MGGGSR+DSPPSAP TD+
Sbjct: 334 MGGGSRRDSPPSAPETDL 387
>gb|BE359944.1|BE359944 DG1_58_G02.g2_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 375
Score = 118 bits (252), Expect(2) = 2e-052
Identities = 45/53 (84%), Positives = 48/53 (90%)
Frame = -2 / +3
Query: 676 IRSFKRYADLPYPSSRPMTLHATLWDGSYWATEKGRVGIDWSDAPFVVSYRSY 518
IR FKRYADL YPSS+PMTLHATLWDGSYWATEKG+V IDWS APFVVSY+ Y
Sbjct: 3 IRVFKRYADLAYPSSKPMTLHATLWDGSYWATEKGKVPIDWSGAPFVVSYKGY 161
Score = 109 bits (232), Expect(2) = 2e-052
Identities = 38/48 (79%), Positives = 43/48 (89%)
Frame = -2 / +3
Query: 463 WMNRQLDSAEWGTVRWAERNFMRYNYCQDGWRFPQGLPAECARH*YAS 320
WMN+Q DSAEWGTV+WAE N+MRYNYC DGWRFPQGLPAEC+R *+ S
Sbjct: 213 WMNKQPDSAEWGTVKWAESNYMRYNYCDDGWRFPQGLPAECSRS*FNS 356
Score = 94.5 bits (200), Expect(2) = 2e-037
Identities = 46/59 (77%), Positives = 47/59 (79%)
Frame = +3 / -3
Query: 501 TQXXXXXXR*ETTKGASDQSMPTLPFSVAQ*LPSHSVACSVMGLELGYGRSA*RLKERM 677
TQ *ETTKGA DQSM TLPFSVAQ*LPSHSVACSVMGLELG RSA*RLK R+
Sbjct: 178 TQASAE*PL*ETTKGAPDQSMGTLPFSVAQ*LPSHSVACSVMGLELG*ARSA*RLKTRI 2
Score = 83.1 bits (175), Expect(2) = 2e-037
Identities = 37/44 (84%), Positives = 37/44 (84%)
Frame = +3 / -3
Query: 330 QWRAHSAGSPCGNLHPSWQ*L*RMKLRSAHLTVPHSALSSCLFI 461
Q R HSAGSPCGNL PS Q*L*RM L SAHLTVPHSALS CLFI
Sbjct: 346 QLRLHSAGSPCGNLQPSSQ*L*RM*LLSAHLTVPHSALSGCLFI 215
Score = 79.0 bits (166), Expect(2) = 4e-028
Identities = 35/41 (85%), Positives = 35/41 (85%)
Frame = +2 / -2
Query: 554 PVDADPALLGGPVAAVPQRGVQRHGPGARVRQVGVALEGAD 676
PVD ALLGGPVAAVPQRGVQRHG GARV QVGVALE AD
Sbjct: 125 PVDGHLALLGGPVAAVPQRGVQRHGLGARVGQVGVALEDAD 3
Score = 77.1 bits (162), Expect(2) = 2e-024
Identities = 31/34 (91%), Positives = 32/34 (94%)
Frame = -1 / +2
Query: 674 PLLQALRRPAVPELQAHDAARHAVGRQLLGHREG 573
P LQALRRP +PELQAHDAARHAVGRQLLGHREG
Sbjct: 5 PRLQALRRPGLPELQAHDAARHAVGRQLLGHREG 106
Score = 67.0 bits (140), Expect(2) = 4e-028
Identities = 30/44 (68%), Positives = 34/44 (77%)
Frame = +2 / -2
Query: 329 SVAGALGGESLREPPPILAVVVAHEVALRPPDGAPLGAVKLPVH 460
S A AL + LREPP ++AVVVAH VAL P DGAPLGAV+L VH
Sbjct: 347 SAAAALRRQPLREPPAVVAVVVAHVVALGPLDGAPLGAVRLLVH 216
Score = 56.5 bits (117), Expect(2) = 2e-024
Identities = 25/27 (92%), Positives = 25/27 (92%)
Frame = -1 / +2
Query: 464 VDEQAA*QRRVGHRQVGGAQLHALQLL 384
VDEQAA*QRRVGHRQVG QLHALQLL
Sbjct: 212 VDEQAA*QRRVGHRQVGREQLHALQLL 292
>gb|CW466352.1|CW466352 fsbb001f217i24f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f217i24, DNA
sequence
Length = 386
Score = 115 bits (245), Expect(2) = 4e-049
Identities = 43/50 (86%), Positives = 46/50 (92%)
Frame = -2 / +1
Query: 667 FKRYADLPYPSSRPMTLHATLWDGSYWATEKGRVGIDWSDAPFVVSYRSY 518
FKRYADL YPSS+PMTLHATLWDGSYWATEKG+V IDWS APFVVSY+ Y
Sbjct: 4 FKRYADLAYPSSKPMTLHATLWDGSYWATEKGKVPIDWSGAPFVVSYKGY 153
Score = 101 bits (215), Expect(2) = 4e-049
Identities = 36/48 (75%), Positives = 42/48 (87%)
Frame = -2 / +1
Query: 463 WMNRQLDSAEWGTVRWAERNFMRYNYCQDGWRFPQGLPAECARH*YAS 320
WMN+Q DSAEWGTV+WAE N+MRY+YC DGWRFPQGLPAE +R *+ S
Sbjct: 205 WMNKQPDSAEWGTVKWAESNYMRYHYCDDGWRFPQGLPAERSRS*FHS 348
Score = 92.3 bits (195), Expect(2) = 7e-035
Identities = 45/56 (80%), Positives = 45/56 (80%)
Frame = +3 / -1
Query: 501 TQXXXXXXR*ETTKGASDQSMPTLPFSVAQ*LPSHSVACSVMGLELGYGRSA*RLK 668
TQ *ETTKGA DQSM TLPFSVAQ*LPSHSVACSVMGLELG RSA*RLK
Sbjct: 170 TQASAE*PL*ETTKGAPDQSMGTLPFSVAQ*LPSHSVACSVMGLELG*ARSA*RLK 3
Score = 76.7 bits (161), Expect(2) = 7e-035
Identities = 35/44 (79%), Positives = 35/44 (79%)
Frame = +3 / -1
Query: 330 QWRAHSAGSPCGNLHPSWQ*L*RMKLRSAHLTVPHSALSSCLFI 461
Q R SAGSPCGNL PS Q* *RM L SAHLTVPHSALS CLFI
Sbjct: 338 QLRLRSAGSPCGNLQPSSQ*W*RM*LLSAHLTVPHSALSGCLFI 207
Score = 74.8 bits (157), Expect(2) = 7e-027
Identities = 33/38 (86%), Positives = 33/38 (86%)
Frame = +2 / -3
Query: 554 PVDADPALLGGPVAAVPQRGVQRHGPGARVRQVGVALE 667
PVD ALLGGPVAAVPQRGVQRHG GARV QVGVALE
Sbjct: 117 PVDGHLALLGGPVAAVPQRGVQRHGLGARVGQVGVALE 4
Score = 74.8 bits (157), Expect(2) = 6e-023
Identities = 30/32 (93%), Positives = 31/32 (96%)
Frame = -1 / +3
Query: 668 LQALRRPAVPELQAHDAARHAVGRQLLGHREG 573
LQALRRP +PELQAHDAARHAVGRQLLGHREG
Sbjct: 3 LQALRRPGLPELQAHDAARHAVGRQLLGHREG 98
Score = 67.0 bits (140), Expect(2) = 7e-027
Identities = 30/44 (68%), Positives = 34/44 (77%)
Frame = +2 / -3
Query: 329 SVAGALGGESLREPPPILAVVVAHEVALRPPDGAPLGAVKLPVH 460
S A AL + LREPP ++AVVVAH VAL P DGAPLGAV+L VH
Sbjct: 339 SAAAALRRQPLREPPAVVAVVVAHVVALGPLDGAPLGAVRLLVH 208
Score = 53.8 bits (111), Expect(2) = 6e-023
Identities = 24/27 (88%), Positives = 24/27 (88%)
Frame = -1 / +3
Query: 464 VDEQAA*QRRVGHRQVGGAQLHALQLL 384
VDEQAA*QRRVGHRQVG QLHAL LL
Sbjct: 204 VDEQAA*QRRVGHRQVGREQLHALPLL 284
>gb|CW289115.1|CW289115 104_767_11412305_148_35537_065 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11412305, DNA
sequence
Length = 426
Score = 109 bits (232), Expect(2) = 3e-048
Identities = 38/48 (79%), Positives = 43/48 (89%)
Frame = -2 / -1
Query: 463 WMNRQLDSAEWGTVRWAERNFMRYNYCQDGWRFPQGLPAECARH*YAS 320
WMN+Q DSAEWGTV+WAE N+MRYNYC DGWRFPQGLPAEC+R *+ S
Sbjct: 237 WMNKQPDSAEWGTVKWAESNYMRYNYCDDGWRFPQGLPAECSRS*FNS 94
Score = 104 bits (222), Expect(2) = 3e-048
Identities = 39/46 (84%), Positives = 42/46 (91%)
Frame = -2 / -1
Query: 655 ADLPYPSSRPMTLHATLWDGSYWATEKGRVGIDWSDAPFVVSYRSY 518
ADL YPSS+PMTLHATLWDGSYWATEKG+V IDWS APFVVSY+ Y
Sbjct: 426 ADLAYPSSKPMTLHATLWDGSYWATEKGKVPIDWSGAPFVVSYKGY 289
Score = 83.5 bits (176), Expect(2) = 3e-034
Identities = 40/51 (78%), Positives = 40/51 (78%)
Frame = +3 / +2
Query: 501 TQXXXXXXR*ETTKGASDQSMPTLPFSVAQ*LPSHSVACSVMGLELGYGRS 653
TQ *ETTKGA DQSM TLPFSVAQ*LPSHSVACSVMGLELG RS
Sbjct: 272 TQASAE*PL*ETTKGAPDQSMGTLPFSVAQ*LPSHSVACSVMGLELG*ARS 424
Score = 83.1 bits (175), Expect(2) = 3e-034
Identities = 37/44 (84%), Positives = 37/44 (84%)
Frame = +3 / +2
Query: 330 QWRAHSAGSPCGNLHPSWQ*L*RMKLRSAHLTVPHSALSSCLFI 461
Q R HSAGSPCGNL PS Q*L*RM L SAHLTVPHSALS CLFI
Sbjct: 104 QLRLHSAGSPCGNLQPSSQ*L*RM*LLSAHLTVPHSALSGCLFI 235
Score = 67.0 bits (140), Expect(2) = 1e-024
Identities = 29/34 (85%), Positives = 29/34 (85%)
Frame = +2 / +1
Query: 554 PVDADPALLGGPVAAVPQRGVQRHGPGARVRQVG 655
PVD ALLGGPVAAVPQRGVQRHG GARV QVG
Sbjct: 325 PVDGHLALLGGPVAAVPQRGVQRHGLGARVGQVG 426
Score = 67.0 bits (140), Expect(2) = 1e-024
Identities = 30/44 (68%), Positives = 34/44 (77%)
Frame = +2 / +1
Query: 329 SVAGALGGESLREPPPILAVVVAHEVALRPPDGAPLGAVKLPVH 460
S A AL + LREPP ++AVVVAH VAL P DGAPLGAV+L VH
Sbjct: 103 SAAAALRRQPLREPPAVVAVVVAHVVALGPLDGAPLGAVRLLVH 234
Score = 64.8 bits (135), Expect(2) = 1e-020
Identities = 25/27 (92%), Positives = 26/27 (96%)
Frame = -1 / -3
Query: 653 RPAVPELQAHDAARHAVGRQLLGHREG 573
RP +PELQAHDAARHAVGRQLLGHREG
Sbjct: 424 RPGLPELQAHDAARHAVGRQLLGHREG 344
Score = 56.5 bits (117), Expect(2) = 1e-020
Identities = 25/27 (92%), Positives = 25/27 (92%)
Frame = -1 / -3
Query: 464 VDEQAA*QRRVGHRQVGGAQLHALQLL 384
VDEQAA*QRRVGHRQVG QLHALQLL
Sbjct: 238 VDEQAA*QRRVGHRQVGREQLHALQLL 158
>gb|BE361720.1|BE361720 DG1_81_C01.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 610
Score = 106 bits (227), Expect(2) = 4e-048
Identities = 36/50 (72%), Positives = 45/50 (90%)
Frame = -2 / +2
Query: 667 FKRYADLPYPSSRPMTLHATLWDGSYWATEKGRVGIDWSDAPFVVSYRSY 518
FKRY DLPYP +PM++HATLWDGSYWAT++G+V +DWS++PFVVSYR Y
Sbjct: 2 FKRYRDLPYPGGKPMSVHATLWDGSYWATQQGKVKVDWSNSPFVVSYRGY 151
Score = 106 bits (226), Expect(2) = 4e-048
Identities = 36/48 (75%), Positives = 43/48 (89%)
Frame = -2 / +2
Query: 463 WMNRQLDSAEWGTVRWAERNFMRYNYCQDGWRFPQGLPAECARH*YAS 320
WMNRQLD+AEWGTV WA++N+M YNYC DGWRFPQG PAEC+R+* A+
Sbjct: 227 WMNRQLDAAEWGTVAWAKKNYMHYNYCDDGWRFPQGFPAECSRN*SAA 370
Score = 82.6 bits (174), Expect(2) = 5e-030
Identities = 36/72 (50%), Positives = 45/72 (62%)
Frame = +2 / -1
Query: 245 IHKEEQESYTRRKKKNTQQNKELTGGRISVAGALGGESLREPPPILAVVVAHEVALRPPD 424
+H+ E + + + + SV+GALGGESLREPPPI+AVVV H V L P D
Sbjct: 445 VHQSRTEVTKNKHESRRRTGSKNNNSSRSVSGALGGESLREPPPIVAVVVVHVVLLCPRD 266
Query: 425 GAPLGAVKLPVH 460
GAPLG V+L VH
Sbjct: 265 GAPLGGVELAVH 230
Score = 69.8 bits (146), Expect(2) = 5e-030
Identities = 35/56 (62%), Positives = 36/56 (64%)
Frame = +3 / -2
Query: 501 TQXXXXXXR*ETTKGASDQSMPTLPFSVAQ*LPSHSVACSVMGLELGYGRSA*RLK 668
TQ R ETT G DQS T P VAQ*LPSHSVAC+ MG GYGRS *RLK
Sbjct: 168 TQASAV*PRYETTNGELDQSTFTFPCCVAQ*LPSHSVACTDMGFPPGYGRSR*RLK 1
>gb|CD236019.1|CD236019 SS1_25_C10.b1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_25_C10_A012 3', mRNA sequence
Length = 597
Score = 105 bits (225), Expect(3) = 1e-047
Identities = 37/48 (77%), Positives = 42/48 (87%)
Frame = -2 / +3
Query: 463 WMNRQLDSAEWGTVRWAERNFMRYNYCQDGWRFPQGLPAECARH*YAS 320
WMN+Q DSAEWGTV+WAE N+MRYNYC DGWRFPQGLPA C+R *+ S
Sbjct: 192 WMNKQPDSAEWGTVKWAESNYMRYNYCDDGWRFPQGLPAGCSRS*FNS 335
Score = 104 bits (222), Expect(3) = 1e-047
Identities = 39/46 (84%), Positives = 42/46 (91%)
Frame = -2 / +3
Query: 655 ADLPYPSSRPMTLHATLWDGSYWATEKGRVGIDWSDAPFVVSYRSY 518
ADL YPSS+PMTLHATLWDGSYWATEKG+V IDWS APFVVSY+ Y
Sbjct: 3 ADLAYPSSKPMTLHATLWDGSYWATEKGKVPIDWSGAPFVVSYKGY 140
Score = 85.4 bits (180), Expect(2) = 4e-034
Identities = 41/52 (78%), Positives = 41/52 (78%)
Frame = +3 / -3
Query: 501 TQXXXXXXR*ETTKGASDQSMPTLPFSVAQ*LPSHSVACSVMGLELGYGRSA 656
TQ *ETTKGA DQSM TLPFSVAQ*LPSHSVACSVMGLELG RSA
Sbjct: 157 TQASAE*PL*ETTKGAPDQSMGTLPFSVAQ*LPSHSVACSVMGLELG*ARSA 2
Score = 80.8 bits (170), Expect(2) = 4e-034
Identities = 36/44 (81%), Positives = 36/44 (81%)
Frame = +3 / -3
Query: 330 QWRAHSAGSPCGNLHPSWQ*L*RMKLRSAHLTVPHSALSSCLFI 461
Q R H AGSPCGNL PS Q*L*RM L SAHLTVPHSALS CLFI
Sbjct: 325 QLRLHPAGSPCGNLQPSSQ*L*RM*LLSAHLTVPHSALSGCLFI 194
Score = 67.0 bits (140), Expect(2) = 1e-023
Identities = 29/34 (85%), Positives = 29/34 (85%)
Frame = +2 / -2
Query: 554 PVDADPALLGGPVAAVPQRGVQRHGPGARVRQVG 655
PVD ALLGGPVAAVPQRGVQRHG GARV QVG
Sbjct: 104 PVDGHLALLGGPVAAVPQRGVQRHGLGARVGQVG 3
Score = 67.0 bits (140), Expect(2) = 2e-021
Identities = 26/28 (92%), Positives = 27/28 (96%)
Frame = -1 / +2
Query: 656 RRPAVPELQAHDAARHAVGRQLLGHREG 573
RRP +PELQAHDAARHAVGRQLLGHREG
Sbjct: 2 RRPGLPELQAHDAARHAVGRQLLGHREG 85
Score = 63.8 bits (133), Expect(2) = 1e-023
Identities = 29/44 (65%), Positives = 33/44 (75%)
Frame = +2 / -2
Query: 329 SVAGALGGESLREPPPILAVVVAHEVALRPPDGAPLGAVKLPVH 460
S A A + LREPP ++AVVVAH VAL P DGAPLGAV+L VH
Sbjct: 326 SAAAAPRRQPLREPPAVVAVVVAHVVALGPLDGAPLGAVRLLVH 195
Score = 56.5 bits (117), Expect(2) = 2e-021
Identities = 25/27 (92%), Positives = 25/27 (92%)
Frame = -1 / +2
Query: 464 VDEQAA*QRRVGHRQVGGAQLHALQLL 384
VDEQAA*QRRVGHRQVG QLHALQLL
Sbjct: 191 VDEQAA*QRRVGHRQVGREQLHALQLL 271
Score = 21.7 bits (41), Expect(3) = 1e-047
Identities = 6/14 (42%), Positives = 11/14 (78%)
Frame = -3 / +1
Query: 297 WVFFFFLRVYDSCS 256
++F ++ +YDSCS
Sbjct: 403 FIFAGYIYIYDSCS 444
>gb|CN140043.1|CN140043 OX1_33_E06.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_33_E06_A002 5', mRNA sequence
Length = 800
Score = 170 bits (365), Expect(2) = 1e-045
Identities = 65/73 (89%), Positives = 70/73 (95%)
Frame = -2 / +2
Query: 736 HTYTIIWNPTSILFKVDDLFIRSFKRYADLPYPSSRPMTLHATLWDGSYWATEKGRVGID 557
HTYTIIWNPT+ILFKVD+LFIRSFKRYADL YPSS+PMTLHATLWDGSYWATEKG++ ID
Sbjct: 491 HTYTIIWNPTNILFKVDNLFIRSFKRYADLAYPSSKPMTLHATLWDGSYWATEKGKMPID 670
Query: 556 WSDAPFVVSYRSY 518
WS APFVVSYRSY
Sbjct: 671 WSGAPFVVSYRSY 709
Score = 133 bits (286), Expect(2) = 7e-033
Identities = 65/78 (83%), Positives = 66/78 (84%)
Frame = +3 / -3
Query: 501 TQXXXXXXR*ETTKGASDQSMPTLPFSVAQ*LPSHSVACSVMGLELGYGRSA*RLKERMK 680
TQ R*ETTKGA DQSM LPFSVAQ*LPSHSVACSVMGLELG RSA*RLK+RMK
Sbjct: 726 TQAXAA*LR*ETTKGAPDQSMGILPFSVAQ*LPSHSVACSVMGLELG*ARSA*RLKDRMK 547
Query: 681 RSSTLNRMLVGFQMMV*V 734
R STLNRM VGFQMMV*V
Sbjct: 546 RLSTLNRMFVGFQMMV*V 493
Score = 111 bits (238), Expect(2) = 3e-026
Identities = 51/63 (80%), Positives = 51/63 (80%)
Frame = +2 / -2
Query: 554 PVDADPALLGGPVAAVPQRGVQRHGPGARVRQVGVALEGADEEVVDLEQDAGRVPDDGVG 733
PVD ALL PVAAVPQRGVQRHG GARV QVGVALEG DEEVV LEQD RVPDDGVG
Sbjct: 673 PVDGHLALLRRPVAAVPQRGVQRHGLGARVGQVGVALEGPDEEVVHLEQDVRRVPDDGVG 494
Query: 734 VCV 742
V V
Sbjct: 493 VVV 485
Score = 34.5 bits (69), Expect(2) = 1e-045
Identities = 11/13 (84%), Positives = 13/13 (100%)
Frame = -2 / +2
Query: 463 WMNRQLDSAEWGT 425
WM+RQLD+AEWGT
Sbjct: 761 WMHRQLDNAEWGT 799
Score = 28.1 bits (55), Expect(2) = 7e-033
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +2 / -2
Query: 425 GAPLGAVKLPVH 460
GAPLG V+LPVH
Sbjct: 799 GAPLGVVELPVH 764
Score = 27.6 bits (54), Expect(2) = 3e-026
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = +1 / -1
Query: 424 RCPTRRCQAA 453
RCPTRRC+AA
Sbjct: 800 RCPTRRCRAA 771
>gb|CW120757.1|CW120757 104_498_11109515_148_34653_042 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11109515, DNA
sequence
Length = 679
Score = 119 bits (254), Expect(2) = 5e-045
Identities = 44/53 (83%), Positives = 49/53 (92%)
Frame = -2 / +1
Query: 676 IRSFKRYADLPYPSSRPMTLHATLWDGSYWATEKGRVGIDWSDAPFVVSYRSY 518
+R FKRYADLPYPSS+PM +HATLWDGSYWATEKG+V IDWS APFVVSYR+Y
Sbjct: 7 VRVFKRYADLPYPSSKPMAVHATLWDGSYWATEKGKVPIDWSRAPFVVSYRAY 165
Score = 101 bits (215), Expect(2) = 2e-034
Identities = 46/57 (80%), Positives = 47/57 (82%)
Frame = +3 / -3
Query: 504 QXXXXXXR*ETTKGASDQSMPTLPFSVAQ*LPSHSVACSVMGLELGYGRSA*RLKER 674
Q R*ETTKGA DQSM TLPFSVAQ*LPSHSVAC+ MGLELGYGRSA*RLK R
Sbjct: 179 QALAVYAR*ETTKGARDQSMGTLPFSVAQ*LPSHSVACTAMGLELGYGRSA*RLKTR 9
Score = 83.5 bits (176), Expect(2) = 5e-045
Identities = 29/45 (64%), Positives = 35/45 (77%)
Frame = -2 / +1
Query: 463 WMNRQLDSAEWGTVRWAERNFMRYNYCQDGWRFPQGLPAECARH* 329
WM+RQ D + TV WA RN ++YNYC+DGWRFPQG P ECAR+*
Sbjct: 244 WMDRQPDDTDRLTVEWARRNCLQYNYCEDGWRFPQGFPGECARN* 378
Score = 77.1 bits (162), Expect(2) = 5e-024
Identities = 34/40 (85%), Positives = 34/40 (85%)
Frame = +2 / -2
Query: 554 PVDADPALLGGPVAAVPQRGVQRHGPGARVRQVGVALEGA 673
PVD ALLGGPVAAVPQRGV RHG GARVRQVGVALE A
Sbjct: 129 PVDGHLALLGGPVAAVPQRGVHRHGLGARVRQVGVALEDA 10
Score = 66.1 bits (138), Expect(2) = 2e-034
Identities = 29/44 (65%), Positives = 31/44 (70%)
Frame = +2 / -2
Query: 329 SVAGALGGESLREPPPILAVVVAHEVALRPPDGAPLGAVKLPVH 460
SVAGAL GE LRE PP+LAVVV V RP G P+G V LPVH
Sbjct: 378 SVAGALAGEPLREAPPVLAVVVLQAVPARPLHGEPVGVVGLPVH 247
Score = 55.1 bits (114), Expect(2) = 5e-024
Identities = 25/45 (55%), Positives = 28/45 (62%)
Frame = +3 / -3
Query: 327 YQWRAHSAGSPCGNLHPSWQ*L*RMKLRSAHLTVPHSALSSCLFI 461
+Q RAHS G+PCG HPS Q*L + R AH TV S S CL I
Sbjct: 380 HQLRAHSPGNPCGKRHPSSQ*LYCKQFRRAHSTVSRSVSSGCLSI 246
>gb|CF771208.1|CF771208 DSBF1_15_F05.g1_A010 Drought-stressed before flowering Sorghum
bicolor cDNA clone DSBF1_15_F05_A010 3', mRNA sequence
Length = 500
Score = 106 bits (226), Expect(2) = 8e-043
Identities = 36/48 (75%), Positives = 43/48 (89%)
Frame = -2 / +1
Query: 463 WMNRQLDSAEWGTVRWAERNFMRYNYCQDGWRFPQGLPAECARH*YAS 320
WMNRQLD+AEWGTV WA++N+M YNYC DGWRFPQG PAEC+R+* A+
Sbjct: 205 WMNRQLDAAEWGTVAWAKKNYMHYNYCDDGWRFPQGFPAECSRN*SAA 348
Score = 89.0 bits (188), Expect(2) = 8e-043
Identities = 29/42 (69%), Positives = 38/42 (90%)
Frame = -2 / +3
Query: 643 YPSSRPMTLHATLWDGSYWATEKGRVGIDWSDAPFVVSYRSY 518
YP +PM++HATLWDGSYWAT++G+V +DWS++PFVVSYR Y
Sbjct: 3 YPGGKPMSVHATLWDGSYWATQQGKVKVDWSNSPFVVSYRGY 128
Score = 82.6 bits (174), Expect(2) = 5e-026
Identities = 36/72 (50%), Positives = 45/72 (62%)
Frame = +2 / -3
Query: 245 IHKEEQESYTRRKKKNTQQNKELTGGRISVAGALGGESLREPPPILAVVVAHEVALRPPD 424
+H+ E + + + + SV+GALGGESLREPPPI+AVVV H V L P D
Sbjct: 423 VHQSRTEVTKNKHESRRRTGSKNNNSSRSVSGALGGESLREPPPIVAVVVVHVVLLCPRD 244
Query: 425 GAPLGAVKLPVH 460
GAPLG V+L VH
Sbjct: 243 GAPLGGVELAVH 208
Score = 56.5 bits (117), Expect(2) = 5e-026
Identities = 28/48 (58%), Positives = 29/48 (60%)
Frame = +3 / -2
Query: 501 TQXXXXXXR*ETTKGASDQSMPTLPFSVAQ*LPSHSVACSVMGLELGY 644
TQ R ETT G DQS T P VAQ*LPSHSVAC+ MG GY
Sbjct: 145 TQASAV*PRYETTNGELDQSTFTFPCCVAQ*LPSHSVACTDMGFPPGY 2
>gb|AW924499.1|AW924499 WS1_70_C10.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 528
Score = 106 bits (226), Expect(2) = 5e-042
Identities = 36/48 (75%), Positives = 43/48 (89%)
Frame = -2 / +2
Query: 463 WMNRQLDSAEWGTVRWAERNFMRYNYCQDGWRFPQGLPAECARH*YAS 320
WMNRQLD+AEWGTV WA++N+M YNYC DGWRFPQG PAEC+R+* A+
Sbjct: 224 WMNRQLDAAEWGTVAWAKKNYMHYNYCDDGWRFPQGFPAECSRN*SAA 367
Score = 86.3 bits (182), Expect(2) = 5e-042
Identities = 28/41 (68%), Positives = 38/41 (92%)
Frame = -2 / +2
Query: 640 PSSRPMTLHATLWDGSYWATEKGRVGIDWSDAPFVVSYRSY 518
P+ +PM++HATLWDGSYWAT++G+V +DWS++PFVVSYR Y
Sbjct: 26 PAGKPMSVHATLWDGSYWATQQGKVKVDWSNSPFVVSYRGY 148
Score = 82.6 bits (174), Expect(2) = 3e-025
Identities = 36/72 (50%), Positives = 45/72 (62%)
Frame = +2 / -3
Query: 245 IHKEEQESYTRRKKKNTQQNKELTGGRISVAGALGGESLREPPPILAVVVAHEVALRPPD 424
+H+ E + + + + SV+GALGGESLREPPPI+AVVV H V L P D
Sbjct: 442 VHQSRTEVTKNKHESRRRTGSKNNNSSRSVSGALGGESLREPPPIVAVVVVHVVLLCPRD 263
Query: 425 GAPLGAVKLPVH 460
GAPLG V+L VH
Sbjct: 262 GAPLGGVELAVH 227
Score = 53.8 bits (111), Expect(2) = 3e-025
Identities = 27/47 (57%), Positives = 28/47 (59%)
Frame = +3 / -1
Query: 501 TQXXXXXXR*ETTKGASDQSMPTLPFSVAQ*LPSHSVACSVMGLELG 641
TQ R ETT G DQS T P VAQ*LPSHSVAC+ MG G
Sbjct: 165 TQASAV*PRYETTNGELDQSTFTFPCCVAQ*LPSHSVACTDMGXPAG 25
>gb|CW306937.1|CW306937 104_792_11467109_116_35709_017 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11467109, DNA
sequence
Length = 702
Score = 170 bits (365), Expect = 3e-041
Identities = 65/73 (89%), Positives = 70/73 (95%)
Frame = -2 / +3
Query: 736 HTYTIIWNPTSILFKVDDLFIRSFKRYADLPYPSSRPMTLHATLWDGSYWATEKGRVGID 557
HTYTIIWNPT+ILFKVD+LFIRSFKRYADL YPSS+PMTLHATLWDGSYWATEKG++ ID
Sbjct: 462 HTYTIIWNPTNILFKVDNLFIRSFKRYADLAYPSSKPMTLHATLWDGSYWATEKGKMPID 641
Query: 556 WSDAPFVVSYRSY 518
WS APFVVSYRSY
Sbjct: 642 WSGAPFVVSYRSY 680
Score = 133 bits (286), Expect = 2e-030
Identities = 64/78 (82%), Positives = 65/78 (83%)
Frame = +3 / -3
Query: 501 TQXXXXXXR*ETTKGASDQSMPTLPFSVAQ*LPSHSVACSVMGLELGYGRSA*RLKERMK 680
TQ R*ETTKGA DQSM LPFSVAQ*LPSHSVACSVMGLELG RSA*RLK+RMK
Sbjct: 697 TQALAA*LR*ETTKGAPDQSMGILPFSVAQ*LPSHSVACSVMGLELG*ARSA*RLKDRMK 518
Query: 681 RSSTLNRMLVGFQMMV*V 734
R STLNRM VGFQMMV*V
Sbjct: 517 RLSTLNRMFVGFQMMV*V 464
Score = 111 bits (238), Expect = 9e-024
Identities = 51/63 (80%), Positives = 51/63 (80%)
Frame = +2 / -2
Query: 554 PVDADPALLGGPVAAVPQRGVQRHGPGARVRQVGVALEGADEEVVDLEQDAGRVPDDGVG 733
PVD ALL PVAAVPQRGVQRHG GARV QVGVALEG DEEVV LEQD RVPDDGVG
Sbjct: 644 PVDGHLALLRRPVAAVPQRGVQRHGLGARVGQVGVALEGPDEEVVHLEQDVRRVPDDGVG 465
Query: 734 VCV 742
V V
Sbjct: 464 VVV 456
>gb|CX616545.1|CX616545 GABR1_28_C04.g1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_28_C04_A002 5', mRNA sequence
Length = 725
Score = 167 bits (359), Expect = 2e-040
Identities = 64/73 (87%), Positives = 69/73 (94%)
Frame = -2 / +2
Query: 736 HTYTIIWNPTSILFKVDDLFIRSFKRYADLPYPSSRPMTLHATLWDGSYWATEKGRVGID 557
HTYTIIWNPT+ILFKVD+L IRSFKRYADL YPSS+PMTLHATLWDGSYWATEKG++ ID
Sbjct: 491 HTYTIIWNPTNILFKVDNLLIRSFKRYADLAYPSSKPMTLHATLWDGSYWATEKGKMPID 670
Query: 556 WSDAPFVVSYRSY 518
WS APFVVSYRSY
Sbjct: 671 WSGAPFVVSYRSY 709
Score = 130 bits (279), Expect = 2e-029
Identities = 61/70 (87%), Positives = 63/70 (90%)
Frame = +3 / -3
Query: 525 R*ETTKGASDQSMPTLPFSVAQ*LPSHSVACSVMGLELGYGRSA*RLKERMKRSSTLNRM 704
R*ETTKGA DQSM LPFSVAQ*LPSHSVACSVMGLELG RSA*RLK+RM+R STLNRM
Sbjct: 702 R*ETTKGAPDQSMGILPFSVAQ*LPSHSVACSVMGLELG*ARSA*RLKDRMRRLSTLNRM 523
Query: 705 LVGFQMMV*V 734
VGFQMMV*V
Sbjct: 522 FVGFQMMV*V 493
Score = 111 bits (238), Expect = 9e-024
Identities = 51/63 (80%), Positives = 51/63 (80%)
Frame = +2 / -2
Query: 554 PVDADPALLGGPVAAVPQRGVQRHGPGARVRQVGVALEGADEEVVDLEQDAGRVPDDGVG 733
PVD ALL PVAAVPQRGVQRHG GARV QVGVALEG DEEVV LEQD RVPDDGVG
Sbjct: 673 PVDGHLALLRRPVAAVPQRGVQRHGLGARVGQVGVALEGPDEEVVHLEQDVRRVPDDGVG 494
Query: 734 VCV 742
V V
Sbjct: 493 VVV 485
>gb|CN144004.1|CN144004 WOUND1_19_D07.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_19_D07_A002 5', mRNA sequence
Length = 804
Score = 161 bits (346), Expect = 1e-038
Identities = 62/73 (84%), Positives = 66/73 (90%)
Frame = -2 / +2
Query: 736 HTYTIIWNPTSILFKVDDLFIRSFKRYADLPYPSSRPMTLHATLWDGSYWATEKGRVGID 557
HTYTIIWNPT+ILFKVDD IR FKRYADL YPSS+PMTLHATLWDGSYWATEKG+V ID
Sbjct: 530 HTYTIIWNPTNILFKVDDNVIRVFKRYADLAYPSSKPMTLHATLWDGSYWATEKGKVPID 709
Query: 556 WSDAPFVVSYRSY 518
WS APFVVSY+ Y
Sbjct: 710 WSGAPFVVSYKGY 748
Score = 125 bits (268), Expect = 7e-028
Identities = 62/78 (79%), Positives = 63/78 (80%)
Frame = +3 / -1
Query: 501 TQXXXXXXR*ETTKGASDQSMPTLPFSVAQ*LPSHSVACSVMGLELGYGRSA*RLKERMK 680
TQ *ETTKGA DQSM TLPFSVAQ*LPSHSVACSVMGLELG RSA*RLK R+
Sbjct: 765 TQASAE*PL*ETTKGAPDQSMGTLPFSVAQ*LPSHSVACSVMGLELG*ARSA*RLKTRIT 586
Query: 681 RSSTLNRMLVGFQMMV*V 734
SSTL RMLVGFQMMV*V
Sbjct: 585 LSSTLKRMLVGFQMMV*V 532
Score = 115 bits (245), Expect = 1e-024
Identities = 51/63 (80%), Positives = 52/63 (82%)
Frame = +2 / -3
Query: 554 PVDADPALLGGPVAAVPQRGVQRHGPGARVRQVGVALEGADEEVVDLEQDAGRVPDDGVG 733
PVD ALLGGPVAAVPQRGVQRHG GARV QVGVALE AD VV LE+D GRVPDDGVG
Sbjct: 712 PVDGHLALLGGPVAAVPQRGVQRHGLGARVGQVGVALEDADHVVVHLEEDVGRVPDDGVG 533
Query: 734 VCV 742
V V
Sbjct: 532 VVV 524
>gb|CX609287.1|CX609287 ANR1_11_F09.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_11_F09_A002 5', mRNA sequence
Length = 810
Score = 161 bits (346), Expect = 1e-038
Identities = 62/73 (84%), Positives = 66/73 (90%)
Frame = -2 / +2
Query: 736 HTYTIIWNPTSILFKVDDLFIRSFKRYADLPYPSSRPMTLHATLWDGSYWATEKGRVGID 557
HTYTIIWNPT+ILFKVDD IR FKRYADL YPSS+PMTLHATLWDGSYWATEKG+V ID
Sbjct: 515 HTYTIIWNPTNILFKVDDNVIRVFKRYADLAYPSSKPMTLHATLWDGSYWATEKGKVPID 694
Query: 556 WSDAPFVVSYRSY 518
WS APFVVSY+ Y
Sbjct: 695 WSGAPFVVSYKGY 733
Score = 125 bits (268), Expect = 7e-028
Identities = 62/78 (79%), Positives = 63/78 (80%)
Frame = +3 / -1
Query: 501 TQXXXXXXR*ETTKGASDQSMPTLPFSVAQ*LPSHSVACSVMGLELGYGRSA*RLKERMK 680
TQ *ETTKGA DQSM TLPFSVAQ*LPSHSVACSVMGLELG RSA*RLK R+
Sbjct: 750 TQASAE*PL*ETTKGAPDQSMGTLPFSVAQ*LPSHSVACSVMGLELG*ARSA*RLKTRIT 571
Query: 681 RSSTLNRMLVGFQMMV*V 734
SSTL RMLVGFQMMV*V
Sbjct: 570 LSSTLKRMLVGFQMMV*V 517
Score = 115 bits (245), Expect = 1e-024
Identities = 51/63 (80%), Positives = 52/63 (82%)
Frame = +2 / -3
Query: 554 PVDADPALLGGPVAAVPQRGVQRHGPGARVRQVGVALEGADEEVVDLEQDAGRVPDDGVG 733
PVD ALLGGPVAAVPQRGVQRHG GARV QVGVALE AD VV LE+D GRVPDDGVG
Sbjct: 697 PVDGHLALLGGPVAAVPQRGVQRHGLGARVGQVGVALEDADHVVVHLEEDVGRVPDDGVG 518
Query: 734 VCV 742
V V
Sbjct: 517 VVV 509
>gb|CX609406.1|CX609406 ANR1_12_B05.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_12_B05_A002 5', mRNA sequence
Length = 826
Score = 161 bits (346), Expect = 1e-038
Identities = 62/73 (84%), Positives = 66/73 (90%)
Frame = -2 / +3
Query: 736 HTYTIIWNPTSILFKVDDLFIRSFKRYADLPYPSSRPMTLHATLWDGSYWATEKGRVGID 557
HTYTIIWNPT+ILFKVDD IR FKRYADL YPSS+PMTLHATLWDGSYWATEKG+V ID
Sbjct: 531 HTYTIIWNPTNILFKVDDNVIRVFKRYADLAYPSSKPMTLHATLWDGSYWATEKGKVPID 710
Query: 556 WSDAPFVVSYRSY 518
WS APFVVSY+ Y
Sbjct: 711 WSGAPFVVSYKGY 749
Score = 125 bits (268), Expect = 7e-028
Identities = 62/78 (79%), Positives = 63/78 (80%)
Frame = +3 / -1
Query: 501 TQXXXXXXR*ETTKGASDQSMPTLPFSVAQ*LPSHSVACSVMGLELGYGRSA*RLKERMK 680
TQ *ETTKGA DQSM TLPFSVAQ*LPSHSVACSVMGLELG RSA*RLK R+
Sbjct: 766 TQASAE*PL*ETTKGAPDQSMGTLPFSVAQ*LPSHSVACSVMGLELG*ARSA*RLKTRIT 587
Query: 681 RSSTLNRMLVGFQMMV*V 734
SSTL RMLVGFQMMV*V
Sbjct: 586 LSSTLKRMLVGFQMMV*V 533
Score = 115 bits (245), Expect = 1e-024
Identities = 51/63 (80%), Positives = 52/63 (82%)
Frame = +2 / -3
Query: 554 PVDADPALLGGPVAAVPQRGVQRHGPGARVRQVGVALEGADEEVVDLEQDAGRVPDDGVG 733
PVD ALLGGPVAAVPQRGVQRHG GARV QVGVALE AD VV LE+D GRVPDDGVG
Sbjct: 713 PVDGHLALLGGPVAAVPQRGVQRHGLGARVGQVGVALEDADHVVVHLEEDVGRVPDDGVG 534
Query: 734 VCV 742
V V
Sbjct: 533 VVV 525
>gb|CW299072.1|CW299072 104_781_11462920_116_35661_050 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11462920, DNA
sequence
Length = 655
Score = 158 bits (340), Expect = 8e-038
Identities = 61/72 (84%), Positives = 66/72 (91%)
Frame = -2 / +2
Query: 736 HTYTIIWNPTSILFKVDDLFIRSFKRYADLPYPSSRPMTLHATLWDGSYWATEKGRVGID 557
HTYTIIWNPT+ILFKVDD IR FKRYADL YPSS+PMTLHATLWDGSYWATEKG+V ID
Sbjct: 359 HTYTIIWNPTNILFKVDDNVIRVFKRYADLAYPSSKPMTLHATLWDGSYWATEKGKVPID 538
Query: 556 WSDAPFVVSYRS 521
WS APFVVSY++
Sbjct: 539 WSGAPFVVSYKA 574
Score = 125 bits (267), Expect = 9e-028
Identities = 60/69 (86%), Positives = 61/69 (88%)
Frame = +3 / -2
Query: 528 *ETTKGASDQSMPTLPFSVAQ*LPSHSVACSVMGLELGYGRSA*RLKERMKRSSTLNRML 707
*ETTKGA DQSM TLPFSVAQ*LPSHSVACSVMGLELG RSA*RLK R+ SSTL RML
Sbjct: 567 *ETTKGAPDQSMGTLPFSVAQ*LPSHSVACSVMGLELG*ARSA*RLKTRITLSSTLKRML 388
Query: 708 VGFQMMV*V 734
VGFQMMV*V
Sbjct: 387 VGFQMMV*V 361
Score = 115 bits (245), Expect = 1e-024
Identities = 51/63 (80%), Positives = 52/63 (82%)
Frame = +2 / -1
Query: 554 PVDADPALLGGPVAAVPQRGVQRHGPGARVRQVGVALEGADEEVVDLEQDAGRVPDDGVG 733
PVD ALLGGPVAAVPQRGVQRHG GARV QVGVALE AD VV LE+D GRVPDDGVG
Sbjct: 541 PVDGHLALLGGPVAAVPQRGVQRHGLGARVGQVGVALEDADHVVVHLEEDVGRVPDDGVG 362
Query: 734 VCV 742
V V
Sbjct: 361 VVV 353
>gb|CW415288.1|CW415288 fsbb001f115f07f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f115f07, DNA
sequence
Length = 325
Score = 158 bits (340), Expect = 8e-038
Identities = 61/70 (87%), Positives = 65/70 (92%)
Frame = -2 / +2
Query: 736 HTYTIIWNPTSILFKVDDLFIRSFKRYADLPYPSSRPMTLHATLWDGSYWATEKGRVGID 557
HTYTIIWNPT+ILFKVD+LFIRSFKRYADL YPSS+PMTLHATLWDGSYWATEKG + ID
Sbjct: 116 HTYTIIWNPTNILFKVDNLFIRSFKRYADLAYPSSKPMTLHATLWDGSYWATEKGNMPID 295
Query: 556 WSDAPFVVSY 527
WS APF VSY
Sbjct: 296 WSGAPFGVSY 325
Score = 124 bits (266), Expect = 1e-027
Identities = 59/69 (85%), Positives = 60/69 (86%)
Frame = +3 / -2
Query: 528 *ETTKGASDQSMPTLPFSVAQ*LPSHSVACSVMGLELGYGRSA*RLKERMKRSSTLNRML 707
*ET KGA DQSM LPFSVAQ*LPSH VACSVMGLELG RSA*RLK+RMKR STLNRM
Sbjct: 324 *ETPKGAPDQSMGMLPFSVAQ*LPSHRVACSVMGLELG*ARSA*RLKDRMKRLSTLNRMF 145
Query: 708 VGFQMMV*V 734
VGFQMMV*V
Sbjct: 144 VGFQMMV*V 118
Score = 109 bits (232), Expect = 6e-023
Identities = 50/63 (79%), Positives = 50/63 (79%)
Frame = +2 / -1
Query: 554 PVDADPALLGGPVAAVPQRGVQRHGPGARVRQVGVALEGADEEVVDLEQDAGRVPDDGVG 733
PVD ALL PVAAVPQ GVQRHG GARV QVGVALEG DEEVV LEQD RVPDDGVG
Sbjct: 298 PVDGHVALLRRPVAAVPQGGVQRHGLGARVGQVGVALEGPDEEVVHLEQDVRRVPDDGVG 119
Query: 734 VCV 742
V V
Sbjct: 118 VVV 110
>gb|CN131212.1|CN131212 RHOH1_46_C04.g1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_46_C04_A002 5', mRNA sequence
Length = 806
Score = 158 bits (339), Expect = 1e-037
Identities = 61/73 (83%), Positives = 65/73 (89%)
Frame = -2 / +2
Query: 736 HTYTIIWNPTSILFKVDDLFIRSFKRYADLPYPSSRPMTLHATLWDGSYWATEKGRVGID 557
HTYTIIWNPT+ILFKVDD IR FKRYADL YPSS+PMTLHATLWDGSYWATEKG+V I
Sbjct: 533 HTYTIIWNPTNILFKVDDNVIRVFKRYADLAYPSSKPMTLHATLWDGSYWATEKGKVPIG 712
Query: 556 WSDAPFVVSYRSY 518
WS APFVVSY+ Y
Sbjct: 713 WSGAPFVVSYKGY 751
Score = 123 bits (263), Expect = 3e-027
Identities = 61/78 (78%), Positives = 62/78 (79%)
Frame = +3 / -3
Query: 501 TQXXXXXXR*ETTKGASDQSMPTLPFSVAQ*LPSHSVACSVMGLELGYGRSA*RLKERMK 680
TQ *ETTKGA DQ M TLPFSVAQ*LPSHSVACSVMGLELG RSA*RLK R+
Sbjct: 768 TQASAE*PL*ETTKGAPDQPMGTLPFSVAQ*LPSHSVACSVMGLELG*ARSA*RLKTRIT 589
Query: 681 RSSTLNRMLVGFQMMV*V 734
SSTL RMLVGFQMMV*V
Sbjct: 588 LSSTLKRMLVGFQMMV*V 535
Score = 113 bits (241), Expect = 4e-024
Identities = 50/63 (79%), Positives = 51/63 (80%)
Frame = +2 / -2
Query: 554 PVDADPALLGGPVAAVPQRGVQRHGPGARVRQVGVALEGADEEVVDLEQDAGRVPDDGVG 733
P D ALLGGPVAAVPQRGVQRHG GARV QVGVALE AD VV LE+D GRVPDDGVG
Sbjct: 715 PADGHLALLGGPVAAVPQRGVQRHGLGARVGQVGVALEDADHVVVHLEEDVGRVPDDGVG 536
Query: 734 VCV 742
V V
Sbjct: 535 VVV 527
>gb|BF422202.1|BF422202 FM1_13_B11.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 566
Score = 93.2 bits (197), Expect(3) = 1e-037
Identities = 33/42 (78%), Positives = 38/42 (90%)
Frame = -2 / +2
Query: 643 YPSSRPMTLHATLWDGSYWATEKGRVGIDWSDAPFVVSYRSY 518
YP ++PM +HATLWDGSYWATEKG+V IDWS APFVVSYR+Y
Sbjct: 2 YPDAKPMAVHATLWDGSYWATEKGKVPIDWSRAPFVVSYRAY 127
Score = 83.5 bits (176), Expect(3) = 1e-037
Identities = 29/45 (64%), Positives = 35/45 (77%)
Frame = -2 / +2
Query: 463 WMNRQLDSAEWGTVRWAERNFMRYNYCQDGWRFPQGLPAECARH* 329
WM+RQ D + TV WA RN ++YNYC+DGWRFPQG P ECAR+*
Sbjct: 194 WMDRQADDTDRLTVDWARRNCLQYNYCEDGWRFPQGFPGECARN* 328
Score = 76.7 bits (161), Expect(2) = 4e-027
Identities = 34/47 (72%), Positives = 35/47 (74%)
Frame = +3 / -3
Query: 504 QXXXXXXR*ETTKGASDQSMPTLPFSVAQ*LPSHSVACSVMGLELGY 644
Q R*ETTKGA DQSM TLPFSVAQ*LPSHSVAC+ MG GY
Sbjct: 141 QALAVYAR*ETTKGARDQSMGTLPFSVAQ*LPSHSVACTAMGFASGY 1
Score = 66.1 bits (138), Expect(2) = 4e-027
Identities = 29/44 (65%), Positives = 31/44 (70%)
Frame = +2 / -2
Query: 329 SVAGALGGESLREPPPILAVVVAHEVALRPPDGAPLGAVKLPVH 460
SVAGAL GE LRE PP+LAVVV V RP G P+G V LPVH
Sbjct: 328 SVAGALAGEPLREAPPVLAVVVLQAVPARPIHGEPVGVVGLPVH 197
Score = 21.7 bits (41), Expect(3) = 1e-037
Identities = 6/18 (33%), Positives = 12/18 (66%)
Frame = -1 / +3
Query: 176 IKHVFFLSCLWIQACSIY 123
I+H++ +CL+ S+Y
Sbjct: 414 IRHIYSSTCLFFSCNSLY 467
>gb|AW564403.1|AW564403 LG1_292_B12.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 546
Score = 154 bits (331), Expect = 1e-036
Identities = 54/73 (73%), Positives = 66/73 (90%)
Frame = -2 / +2
Query: 736 HTYTIIWNPTSILFKVDDLFIRSFKRYADLPYPSSRPMTLHATLWDGSYWATEKGRVGID 557
HTYTIIWN +++FKVDDLFIRSFKRY DLPYP +PM++HATLWDGSYWAT++G+V +D
Sbjct: 251 HTYTIIWNDKNVIFKVDDLFIRSFKRYRDLPYPGGKPMSVHATLWDGSYWATQQGKVKVD 430
Query: 556 WSDAPFVVSYRSY 518
WS++PFVVSYR Y
Sbjct: 431 WSNSPFVVSYRGY 469
>gb|CD226629.1|CD226629 CCC1_47_H10.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_47_H10_A007 3', mRNA sequence
Length = 665
Score = 90.0 bits (190), Expect(2) = 3e-036
Identities = 33/40 (82%), Positives = 37/40 (92%)
Frame = -2 / +2
Query: 637 SSRPMTLHATLWDGSYWATEKGRVGIDWSDAPFVVSYRSY 518
SS+PM +HATLWDGSYWATEKG+V IDWS APFVVSYR+Y
Sbjct: 2 SSKPMAVHATLWDGSYWATEKGKVPIDWSRAPFVVSYRAY 121
Score = 83.5 bits (176), Expect(2) = 3e-036
Identities = 29/45 (64%), Positives = 35/45 (77%)
Frame = -2 / +2
Query: 463 WMNRQLDSAEWGTVRWAERNFMRYNYCQDGWRFPQGLPAECARH* 329
WM+RQ D + TV WA RN ++YNYC+DGWRFPQG P ECAR+*
Sbjct: 200 WMDRQPDDTDRLTVEWARRNCLQYNYCEDGWRFPQGFPGECARN* 334
Score = 78.0 bits (164), Expect(2) = 2e-027
Identities = 35/45 (77%), Positives = 36/45 (80%)
Frame = +3 / -3
Query: 504 QXXXXXXR*ETTKGASDQSMPTLPFSVAQ*LPSHSVACSVMGLEL 638
Q R*ETTKGA DQSM TLPFSVAQ*LPSHSVAC+ MGLEL
Sbjct: 135 QALAVYAR*ETTKGARDQSMGTLPFSVAQ*LPSHSVACTAMGLEL 1
Score = 66.1 bits (138), Expect(2) = 2e-027
Identities = 29/44 (65%), Positives = 31/44 (70%)
Frame = +2 / -2
Query: 329 SVAGALGGESLREPPPILAVVVAHEVALRPPDGAPLGAVKLPVH 460
SVAGAL GE LRE PP+LAVVV V RP G P+G V LPVH
Sbjct: 334 SVAGALAGEPLREAPPVLAVVVLQAVPARPLHGEPVGVVGLPVH 203
>gb|CL148238.1|CL148238 104_328_10592951_116_31783_075 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10592951, DNA
sequence
Length = 325
Score = 151 bits (324), Expect = 1e-035
Identities = 53/73 (72%), Positives = 64/73 (87%)
Frame = -2 / +3
Query: 736 HTYTIIWNPTSILFKVDDLFIRSFKRYADLPYPSSRPMTLHATLWDGSYWATEKGRVGID 557
HTYTIIWN +++FKVDDLFIRSFKRY DLPYP +PM++HATLWDGSYWAT +G+V +D
Sbjct: 78 HTYTIIWNDKNVIFKVDDLFIRSFKRYRDLPYPGGKPMSVHATLWDGSYWATHQGKVNVD 257
Query: 556 WSDAPFVVSYRSY 518
WS++PFV SYR Y
Sbjct: 258 WSNSPFVDSYRGY 296
>gb|BG558625.1|BG558625 RHIZ2_58_C08.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 430
Score = 119 bits (255), Expect(2) = 2e-034
Identities = 42/45 (93%), Positives = 45/45 (100%)
Frame = -2 / +1
Query: 463 WMNRQLDSAEWGTVRWAERNFMRYNYCQDGWRFPQGLPAECARH* 329
WM+RQLDSAEWGTVRWAE+NFMRYNYCQDGWRFPQGLPAEC+RH*
Sbjct: 43 WMHRQLDSAEWGTVRWAEKNFMRYNYCQDGWRFPQGLPAECSRH* 177
Score = 100 bits (212), Expect(4) = 9e-033
Identities = 40/45 (88%), Positives = 41/45 (91%)
Frame = +3 / -3
Query: 327 YQWRAHSAGSPCGNLHPSWQ*L*RMKLRSAHLTVPHSALSSCLFI 461
+QWR HSAGSPCGNLHPSWQ*L*RMK SAHLTVPHSALSSCL I
Sbjct: 179 HQWRLHSAGSPCGNLHPSWQ*L*RMKFFSAHLTVPHSALSSCLCI 45
Score = 96.8 bits (205), Expect(2) = 2e-026
Identities = 40/44 (90%), Positives = 42/44 (95%)
Frame = +2 / -2
Query: 329 SVAGALGGESLREPPPILAVVVAHEVALRPPDGAPLGAVKLPVH 460
SVA ALGGESLREPPPILAVVVAHEV LRPPDG+PLGAV+LPVH
Sbjct: 177 SVAAALGGESLREPPPILAVVVAHEVLLRPPDGSPLGAVELPVH 46
Score = 61.6 bits (128), Expect(3) = 2e-021
Identities = 25/30 (83%), Positives = 27/30 (90%)
Frame = -1 / +3
Query: 464 VDEQAA*QRRVGHRQVGGAQLHALQLLPGW 375
VD QAA QRRVG+RQVGG +LHALQLLPGW
Sbjct: 42 VDAQAARQRRVGNRQVGGEELHALQLLPGW 131
Score = 51.0 bits (105), Expect(4) = 9e-033
Identities = 21/36 (58%), Positives = 26/36 (72%)
Frame = +2 / -1
Query: 203 RPHVASCRAAF*SQIHKEEQESYTRRKKKNTQQNKE 310
+P CRAAF*SQIHK EQESYT+ K+ N N++
Sbjct: 346 QPPTRFCRAAF*SQIHKVEQESYTQEKETNAINNEQ 239
Score = 47.3 bits (97), Expect(2) = 2e-034
Identities = 18/22 (81%), Positives = 18/22 (81%)
Frame = -1 / +1
Query: 287 FFFYGYMILALLCGFVIKKQPC 222
F F GYMIL LLC FVIKKQPC
Sbjct: 262 FLFLGYMILVLLCEFVIKKQPC 327
Score = 43.7 bits (89), Expect(2) = 2e-026
Identities = 17/24 (70%), Positives = 19/24 (79%)
Frame = +1 / -3
Query: 220 LQGCFLITNPQRRARIIYP*KKKE 291
LQGCFLITN Q R RIIYP K+ +
Sbjct: 329 LQGCFLITNSQSRTRIIYPRKRNQ 258
Score = 40.9 bits (83), Expect(3) = 2e-021
Identities = 16/17 (94%), Positives = 16/17 (94%)
Frame = -3 / +2
Query: 378 MGGGSRKDSPPSAPATD 328
MGGGSRKDSPPSA ATD
Sbjct: 128 MGGGSRKDSPPSAAATD 178
Score = 38.6 bits (78), Expect(3) = 2e-021
Identities = 17/21 (80%), Positives = 18/21 (85%)
Frame = -3 / +3
Query: 282 FLRVYDSCSSLWICD*KAALQ 220
F VYDSCS+L ICD*KAALQ
Sbjct: 267 FSWVYDSCSTL*ICD*KAALQ 329
Score = 24.0 bits (46), Expect(4) = 9e-033
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +1 / -2
Query: 124 YMLHACIQRHDKKNTCL 174
YMLHACI KN L
Sbjct: 423 YMLHACIYPKADKNYML 373
Score = 22.1 bits (42), Expect(4) = 9e-033
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +1 / -1
Query: 157 KKNTCLI*EKLGVQQPPTRC 216
K + L EKLGVQ P C
Sbjct: 385 KLHALLFREKLGVQPPTRFC 326
>gb|BG356869.1|BG356869 OV2_11_A05.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 305
Score = 132 bits (282), Expect(2) = 3e-034
Identities = 46/62 (74%), Positives = 57/62 (91%)
Frame = -2 / +3
Query: 703 ILFKVDDLFIRSFKRYADLPYPSSRPMTLHATLWDGSYWATEKGRVGIDWSDAPFVVSYR 524
++FKVDDLFIRSFKRY DLPYP +PM++HATLWDGSYWAT++G+V +DWS++PFVVSYR
Sbjct: 3 VIFKVDDLFIRSFKRYRDLPYPGGKPMSVHATLWDGSYWATQQGKVKVDWSNSPFVVSYR 182
Query: 523 SY 518
Y
Sbjct: 183 GY 188
Score = 34.5 bits (69), Expect(2) = 3e-034
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = -2 / +3
Query: 463 WMNRQLDSAEWG 428
WMNRQLD+AEWG
Sbjct: 264 WMNRQLDAAEWG 299
>gb|CW301138.1|CW301138 104_784_11464043_148_36254_034 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11464043, DNA
sequence
Length = 610
Score = 118 bits (252), Expect(3) = 9e-034
Identities = 41/45 (91%), Positives = 45/45 (100%)
Frame = -2 / -2
Query: 463 WMNRQLDSAEWGTVRWAERNFMRYNYCQDGWRFPQGLPAECARH* 329
WM+RQLD+AEWGTVRWAE+NFMRYNYCQDGWRFPQGLPAEC+RH*
Sbjct: 576 WMHRQLDNAEWGTVRWAEKNFMRYNYCQDGWRFPQGLPAECSRH* 442
Score = 100 bits (212), Expect(3) = 4e-028
Identities = 40/45 (88%), Positives = 41/45 (91%)
Frame = +3 / +2
Query: 327 YQWRAHSAGSPCGNLHPSWQ*L*RMKLRSAHLTVPHSALSSCLFI 461
+QWR HSAGSPCGNLHPSWQ*L*RMK SAHLTVPHSALSSCL I
Sbjct: 440 HQWRLHSAGSPCGNLHPSWQ*L*RMKFFSAHLTVPHSALSSCLCI 574
Score = 96.4 bits (204), Expect(2) = 3e-026
Identities = 40/44 (90%), Positives = 41/44 (93%)
Frame = +2 / +1
Query: 329 SVAGALGGESLREPPPILAVVVAHEVALRPPDGAPLGAVKLPVH 460
SVA ALGGESLREPPPILAVVVAHEV LRPPDGAPLG V+LPVH
Sbjct: 442 SVAAALGGESLREPPPILAVVVAHEVLLRPPDGAPLGVVELPVH 573
Score = 64.8 bits (135), Expect(3) = 6e-021
Identities = 26/30 (86%), Positives = 27/30 (90%)
Frame = -1 / -1
Query: 464 VDEQAA*QRRVGHRQVGGAQLHALQLLPGW 375
VD QAA QRRVGHRQVGG +LHALQLLPGW
Sbjct: 577 VDAQAARQRRVGHRQVGGEELHALQLLPGW 488
Score = 45.5 bits (93), Expect(3) = 9e-034
Identities = 18/22 (81%), Positives = 18/22 (81%)
Frame = -1 / -3
Query: 287 FFFYGYMILALLCGFVIKKQPC 222
F F GYMIL LLC FVIKKQPC
Sbjct: 368 FRFLGYMILILLCEFVIKKQPC 303
Score = 44.6 bits (91), Expect(3) = 4e-028
Identities = 19/36 (52%), Positives = 24/36 (66%)
Frame = +2 / +2
Query: 203 RPHVASCRAAF*SQIHKEEQESYTRRKKKNTQQNKE 310
+P CRAAF*SQIHK E ESYT+ + N N++
Sbjct: 284 QPPTRFCRAAF*SQIHKVE*ESYTQENETNAINNEQ 391
Score = 43.2 bits (88), Expect(2) = 3e-026
Identities = 17/24 (70%), Positives = 19/24 (79%)
Frame = +1 / +1
Query: 220 LQGCFLITNPQRRARIIYP*KKKE 291
LQGCFLITN Q R RIIYP K+ +
Sbjct: 301 LQGCFLITNSQSRIRIIYPRKRNQ 372
Score = 40.9 bits (83), Expect(3) = 6e-021
Identities = 16/17 (94%), Positives = 16/17 (94%)
Frame = -3 / -3
Query: 378 MGGGSRKDSPPSAPATD 328
MGGGSRKDSPPSA ATD
Sbjct: 491 MGGGSRKDSPPSAAATD 441
Score = 33.6 bits (67), Expect(3) = 6e-021
Identities = 16/21 (76%), Positives = 17/21 (80%)
Frame = -3 / -2
Query: 282 FLRVYDSCSSLWICD*KAALQ 220
F VYDS S+L ICD*KAALQ
Sbjct: 363 FSWVYDSYSTL*ICD*KAALQ 301
Score = 21.7 bits (41), Expect(3) = 9e-034
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -2 / -1
Query: 160 FYRAFGY 140
FYRAFGY
Sbjct: 244 FYRAFGY 224
Score = 21.7 bits (41), Expect(3) = 4e-028
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +1 / +1
Query: 124 YMLHACI 144
YMLHACI
Sbjct: 202 YMLHACI 222
>gb|CW451376.1|CW451376 fsbb001f191g19k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f191g19, DNA
sequence
Length = 643
Score = 118 bits (252), Expect(3) = 1e-033
Identities = 41/45 (91%), Positives = 45/45 (100%)
Frame = -2 / -2
Query: 463 WMNRQLDSAEWGTVRWAERNFMRYNYCQDGWRFPQGLPAECARH* 329
WM+RQLD+AEWGTVRWAE+NFMRYNYCQDGWRFPQGLPAEC+RH*
Sbjct: 609 WMHRQLDNAEWGTVRWAEKNFMRYNYCQDGWRFPQGLPAECSRH* 475
Score = 100 bits (212), Expect(3) = 5e-028
Identities = 40/45 (88%), Positives = 41/45 (91%)
Frame = +3 / +2
Query: 327 YQWRAHSAGSPCGNLHPSWQ*L*RMKLRSAHLTVPHSALSSCLFI 461
+QWR HSAGSPCGNLHPSWQ*L*RMK SAHLTVPHSALSSCL I
Sbjct: 473 HQWRLHSAGSPCGNLHPSWQ*L*RMKFFSAHLTVPHSALSSCLCI 607
Score = 96.4 bits (204), Expect(2) = 3e-026
Identities = 40/44 (90%), Positives = 41/44 (93%)
Frame = +2 / +1
Query: 329 SVAGALGGESLREPPPILAVVVAHEVALRPPDGAPLGAVKLPVH 460
SVA ALGGESLREPPPILAVVVAHEV LRPPDGAPLG V+LPVH
Sbjct: 475 SVAAALGGESLREPPPILAVVVAHEVLLRPPDGAPLGVVELPVH 606
Score = 64.8 bits (135), Expect(3) = 6e-021
Identities = 26/30 (86%), Positives = 27/30 (90%)
Frame = -1 / -1
Query: 464 VDEQAA*QRRVGHRQVGGAQLHALQLLPGW 375
VD QAA QRRVGHRQVGG +LHALQLLPGW
Sbjct: 610 VDAQAARQRRVGHRQVGGEELHALQLLPGW 521
Score = 45.5 bits (93), Expect(3) = 1e-033
Identities = 18/22 (81%), Positives = 18/22 (81%)
Frame = -1 / -3
Query: 287 FFFYGYMILALLCGFVIKKQPC 222
F F GYMIL LLC FVIKKQPC
Sbjct: 401 FRFLGYMILILLCEFVIKKQPC 336
Score = 44.6 bits (91), Expect(3) = 5e-028
Identities = 19/36 (52%), Positives = 24/36 (66%)
Frame = +2 / +2
Query: 203 RPHVASCRAAF*SQIHKEEQESYTRRKKKNTQQNKE 310
+P CRAAF*SQIHK E ESYT+ + N N++
Sbjct: 317 QPPTRFCRAAF*SQIHKVE*ESYTQENETNAINNEQ 424
Score = 43.2 bits (88), Expect(2) = 3e-026
Identities = 17/24 (70%), Positives = 19/24 (79%)
Frame = +1 / +1
Query: 220 LQGCFLITNPQRRARIIYP*KKKE 291
LQGCFLITN Q R RIIYP K+ +
Sbjct: 334 LQGCFLITNSQSRIRIIYPRKRNQ 405
Score = 40.9 bits (83), Expect(3) = 6e-021
Identities = 16/17 (94%), Positives = 16/17 (94%)
Frame = -3 / -3
Query: 378 MGGGSRKDSPPSAPATD 328
MGGGSRKDSPPSA ATD
Sbjct: 524 MGGGSRKDSPPSAAATD 474
Score = 33.6 bits (67), Expect(3) = 6e-021
Identities = 16/21 (76%), Positives = 17/21 (80%)
Frame = -3 / -2
Query: 282 FLRVYDSCSSLWICD*KAALQ 220
F VYDS S+L ICD*KAALQ
Sbjct: 396 FSWVYDSYSTL*ICD*KAALQ 334
Score = 21.7 bits (41), Expect(3) = 1e-033
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -2 / -1
Query: 160 FYRAFGY 140
FYRAFGY
Sbjct: 277 FYRAFGY 257
Score = 21.7 bits (41), Expect(3) = 5e-028
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +1 / +1
Query: 124 YMLHACI 144
YMLHACI
Sbjct: 235 YMLHACI 255
>gb|AW924610.1|AW924610 WS1_70_C10.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 436
Score = 106 bits (226), Expect(2) = 2e-033
Identities = 36/48 (75%), Positives = 43/48 (89%)
Frame = -2 / +1
Query: 463 WMNRQLDSAEWGTVRWAERNFMRYNYCQDGWRFPQGLPAECARH*YAS 320
WMNRQLD+AEWGTV WA++N+M YNYC DGWRFPQG PAEC+R+* A+
Sbjct: 157 WMNRQLDAAEWGTVAWAKKNYMHYNYCDDGWRFPQGFPAECSRN*SAA 300
Score = 57.9 bits (120), Expect(2) = 2e-033
Identities = 19/27 (70%), Positives = 25/27 (92%)
Frame = -2 / +1
Query: 598 GSYWATEKGRVGIDWSDAPFVVSYRSY 518
GSYWAT++G+V +DWS++PFVVSYR Y
Sbjct: 1 GSYWATQQGKVKVDWSNSPFVVSYRGY 81
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 763,874,356
Number of Sequences: 832831
Number of extensions: 10510527
Number of successful extensions: 101023
Number of sequences better than 1.0e-020: 101
length of database: 163,786,556
effective HSP length: 54
effective length of database: 118,813,682
effective search space used: 23525109036
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)