TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2440806.2.1
(1136 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CW333050.1|CW333050 104_830_11481737_116_36040_065 Sorgh... 416 e-115
gb|BF656908.1|BF656908 OV2_22_E07.g1_A002 Ovary 2 (OV2) Sor... 319 7e-086
gb|CW461444.1|CW461444 fsbb001f209b20f0 Sorghum methylation... 313 4e-084
gb|CW333051.1|CW333051 104_830_11481737_148_36039_065 Sorgh... 261 1e-068
gb|CW266971.1|CW266971 104_737_11400437_148_35293_031 Sorgh... 230 2e-065
gb|CW401009.1|CW401009 fsbb001f091j18f0 Sorghum methylation... 208 6e-062
gb|BE918829.1|BE918829 FM1_2_E02.g1_A003 Floral-Induced Mer... 225 9e-058
gb|CW060595.1|CW060595 104_304_10519937_115_30144 Sorghum m... 189 3e-053
gb|BG560336.1|BG560336 RHIZ2_73_B09.b1_A003 Rhizome2 (RHIZ2... 143 5e-049
gb|AC169370.3| Sorghum bicolor clone SB_BBc0011I20, WORKING... 111 6e-041
gb|CL189041.1|CL189041 104_406_10902014_114_32468_063 Sorgh... 90 2e-038
gb|CW214306.1|CW214306 104_646_11193944_148_37053_028 Sorgh... 111 3e-035
gb|CW160114.1|CW160114 104_566_11149711_148_36427_024 Sorgh... 117 2e-034
gb|BG240961.1|BG240961 OV1_40_D10.g1_A002 Ovary 1 (OV1) Sor... 137 4e-031
gb|BG240970.1|BG240970 OV1_40_E09.g1_A002 Ovary 1 (OV1) Sor... 137 4e-031
gb|CW368387.1|CW368387 fsbb001f042f08k0 Sorghum methylation... 111 4e-028
gb|CL189042.1|CL189042 104_406_10902014_116_32472_063 Sorgh... 84 1e-027
gb|CW160113.1|CW160113 104_566_11149711_116_36428_024 Sorgh... 93 5e-027
gb|BZ350471.1|BZ350471 ht56g09.g1 WGS-SbicolorF (JM107 adap... 104 5e-027
gb|CW328836.1|CW328836 104_825_11479519_148_36000_030 Sorgh... 99 2e-025
gb|CW100366.1|CW100366 104_467_11004060_116_34389_036 Sorgh... 101 2e-024
gb|CW214305.1|CW214305 104_646_11193944_116_37049_028 Sorgh... 74 6e-024
gb|AW565306.1|AW565306 LG1_342_G08.g1_A002 Light Grown 1 (L... 111 2e-023
gb|BE918689.1|BE918689 FM1_1_D02.g1_A003 Floral-Induced Mer... 111 2e-023
gb|BF656799.1|BF656799 OV2_23_A09.g1_A002 Ovary 2 (OV2) Sor... 111 2e-023
gb|BG053597.1|BG053597 RHIZ2_11_C10.g1_A003 Rhizome2 (RHIZ2... 111 2e-023
gb|BG103538.1|BG103538 RHIZ2_37_G03.g1_A003 Rhizome2 (RHIZ2... 111 2e-023
gb|BG241621.1|BG241621 RHIZ2_17_G12.g1_A003 Rhizome2 (RHIZ2... 111 2e-023
gb|BG465298.1|BG465298 EM1_74_E07.g1_A002 Embryo 1 (EM1) So... 111 2e-023
gb|BI245500.1|BI245500 IP1_66_C03.g1_A002 Immature pannicle... 111 2e-023
gb|BE364812.2|BE364812 PI1_16_E11.g1_A002 Pathogen induced ... 111 2e-023
gb|BM318696.1|BM318696 PI1_16_E11.b9_A002 Pathogen induced ... 111 2e-023
gb|BM329403.1|BM329403 PIC1_37_E01.g1_A002 Pathogen-infecte... 111 2e-023
gb|CD204940.1|CD204940 HS1_11_D02.b1_A012 Heat-shocked seed... 111 2e-023
gb|CN127152.1|CN127152 RHOH1_21_G12.b1_A002 Acid- and alkal... 111 2e-023
gb|CN148130.1|CN148130 WOUND1_54_H01.b1_A002 Wounded leaves... 111 2e-023
gb|CN152450.1|CN152450 WOUND1_82_D06.b1_A002 Wounded leaves... 111 2e-023
gb|CX609487.1|CX609487 ANR1_13_B05.b1_A002 Anaerobic roots ... 111 2e-023
gb|CX611720.1|CX611720 ANR1_26_G07.b1_A002 Anaerobic roots ... 111 2e-023
gb|CX613756.1|CX613756 GABR1_10_B09.b1_A002 GA- or brassino... 111 2e-023
gb|CX613776.1|CX613776 GABR1_10_D06.b1_A002 GA- or brassino... 111 2e-023
gb|BG241283.1|BG241283 OV1_40_D10.b1_A002 Ovary 1 (OV1) Sor... 104 2e-021
gb|BG241293.1|BG241293 OV1_40_E09.b1_A002 Ovary 1 (OV1) Sor... 104 2e-021
>gb|CW333050.1|CW333050 104_830_11481737_116_36040_065 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11481737, DNA
sequence
Length = 653
Score = 416 bits (902), Expect = e-115
Identities = 164/179 (91%), Positives = 173/179 (96%)
Frame = -3 / -3
Query: 849 GLVDAVDGSTAITVSNGHFTRHDHVMLFGASDAASKDREMQVTVAFNHFGKGLVQRMPRC 670
GLVD VDGSTA+T+SNGHFTRHDHVMLFGASDAA KD+ MQVTVAFNHFGKGLVQRMPRC
Sbjct: 651 GLVDVVDGSTAVTISNGHFTRHDHVMLFGASDAAVKDKAMQVTVAFNHFGKGLVQRMPRC 472
Query: 669 RHGFFHVVNNDYTHWLMYAIGGSRNPTIISQGNRFRAVDDSRFKEVTKREYTQYSEYKNW 490
RHGFFHVVNNDYTHWLMYAIGGS+NPTIISQGNRFRAVDD RFKEVTKREYT YSEYK+W
Sbjct: 471 RHGFFHVVNNDYTHWLMYAIGGSQNPTIISQGNRFRAVDDGRFKEVTKREYTPYSEYKDW 292
Query: 489 VWKSQDDLFLNGAFFNQSGGQNERKYDRLDLIQAKGGQYAESLTRYAGALNCRVGRKC* 313
VWKSQDDLFLNGAFFNQSGG+NER++DRLDLIQAKGGQYAE LTRYAGALNCRVG+KC*
Sbjct: 291 VWKSQDDLFLNGAFFNQSGGENERRFDRLDLIQAKGGQYAELLTRYAGALNCRVGKKC* 115
Score = 377 bits (817), Expect = e-103
Identities = 159/179 (88%), Positives = 161/179 (89%)
Frame = +2 / +2
Query: 314 *HFLPTRQLSAPAYLVSDSAYWPPLAWMRSSLSYLRSFWPPDWLKKAPLRNRSSCDFHTQ 493
*HFLPTRQLSAPAYLVS+SAY PPLAWMRSSLS RSF PPDWLKKAPLRNRSSCDFHTQ
Sbjct: 116 *HFLPTRQLSAPAYLVSNSAYCPPLAWMRSSLSNRRSFSPPDWLKKAPLRNRSSCDFHTQ 295
Query: 494 FLYSLYCVYSRLVTSLNLLSSTARKRLPWLMMVGFRLPPMAYMSQCV*SLFTTWKKP*RQ 673
LYSLY VYS LVTSLNL SSTAR R PWLMMVGF LPPMAYMSQCV*SLFTTWKKP RQ
Sbjct: 296 SLYSLYGVYSLLVTSLNLPSSTARNRFPWLMMVGFWLPPMAYMSQCV*SLFTTWKKPWRQ 475
Query: 674 RGIRCTSPLPKWLKATVTCISLSLDAASLAPNSITWSCLVKWPLETVMAVEPSTASTSP 850
RGIRCTSP PKWL ATVTCI+LSL AASLAPNSITWSCLVKWPLE V AVEPST STSP
Sbjct: 476 RGIRCTSPFPKWLNATVTCIALSLTAASLAPNSITWSCLVKWPLEMVTAVEPSTTSTSP 652
Score = 80.8 bits (170), Expect(4) = 1e-024
Identities = 35/58 (60%), Positives = 37/58 (63%)
Frame = +1 / +1
Query: 676 RHPLHQPLAEVVEGDGDLHLPVLGRGVAGPEQHNVVVPREXXXXXXXXXXXXHRVHQP 849
RHPLHQPL+EVVE GDLH VL GVAG EQH+VVVP E H VHQP
Sbjct: 478 RHPLHQPLSEVVERHGDLHRLVLDGGVAGTEQHHVVVPGEVAVGDGHGGGAVHHVHQP 651
Score = 31.3 bits (62), Expect(4) = 1e-024
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +1 / +1
Query: 529 GHLLEPAVVDGAE 567
GHLLEP VVDGAE
Sbjct: 331 GHLLEPPVVDGAE 369
Score = 29.9 bits (59), Expect(4) = 1e-024
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = +3 / +3
Query: 498 CTRCTACTPA 527
CTRCTACTP+
Sbjct: 300 CTRCTACTPS 329
Score = 27.6 bits (54), Expect(4) = 1e-024
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = +1 / +1
Query: 349 GVPGERLGVLAALG 390
GVP E+LGVL+ALG
Sbjct: 151 GVPREQLGVLSALG 192
>gb|BF656908.1|BF656908 OV2_22_E07.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 539
Score = 319 bits (690), Expect = 7e-086
Identities = 124/133 (93%), Positives = 130/133 (97%)
Frame = -3 / +1
Query: 711 NHFGKGLVQRMPRCRHGFFHVVNNDYTHWLMYAIGGSRNPTIISQGNRFRAVDDSRFKEV 532
NHFGKGLVQRMPRCRHGFFHVVNNDYTHWLMYAIGGS+NPTIISQGNRFRAVDD RFKEV
Sbjct: 1 NHFGKGLVQRMPRCRHGFFHVVNNDYTHWLMYAIGGSQNPTIISQGNRFRAVDDGRFKEV 180
Query: 531 TKREYTQYSEYKNWVWKSQDDLFLNGAFFNQSGGQNERKYDRLDLIQAKGGQYAESLTRY 352
TKREYT YSEYK+WVWKSQDDLFLNGAFFNQSGG+NER++DRLDLIQAKGGQYAE LTRY
Sbjct: 181 TKREYTPYSEYKDWVWKSQDDLFLNGAFFNQSGGENERRFDRLDLIQAKGGQYAELLTRY 360
Query: 351 AGALNCRVGRKC* 313
AGALNCRVG+KC*
Sbjct: 361 AGALNCRVGKKC* 399
Score = 281 bits (609), Expect = 1e-074
Identities = 118/132 (89%), Positives = 119/132 (90%)
Frame = +2 / -1
Query: 314 *HFLPTRQLSAPAYLVSDSAYWPPLAWMRSSLSYLRSFWPPDWLKKAPLRNRSSCDFHTQ 493
*HFLPTRQLSAPAYLVS+SAY PPLAWMRSSLS RSF PPDWLKKAPLRNRSSCDFHTQ
Sbjct: 398 *HFLPTRQLSAPAYLVSNSAYCPPLAWMRSSLSNRRSFSPPDWLKKAPLRNRSSCDFHTQ 219
Query: 494 FLYSLYCVYSRLVTSLNLLSSTARKRLPWLMMVGFRLPPMAYMSQCV*SLFTTWKKP*RQ 673
LYSLY VYS LVTSLNL SSTAR R PWLMMVGF LPPMAYMSQCV*SLFTTWKKP RQ
Sbjct: 218 SLYSLYGVYSLLVTSLNLPSSTARNRFPWLMMVGFWLPPMAYMSQCV*SLFTTWKKPWRQ 39
Query: 674 RGIRCTSPLPKW 709
RGIRCTSP PKW
Sbjct: 38 RGIRCTSPFPKW 3
>gb|CW461444.1|CW461444 fsbb001f209b20f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f209b20, DNA
sequence
Length = 495
Score = 313 bits (677), Expect = 4e-084
Identities = 119/155 (76%), Positives = 134/155 (86%)
Frame = -3 / -1
Query: 888 IWIDHLSMSSCADGLVDAVDGSTAITVSNGHFTRHDHVMLFGASDAASKDREMQVTVAFN 709
+WIDH+SMS CADGL+D V+GSTAITVSN HFT HDHVMLFG S+ +D MQ+TVAFN
Sbjct: 465 VWIDHVSMSRCADGLIDVVNGSTAITVSNSHFTHHDHVMLFGPSNDNPQDEVMQITVAFN 286
Query: 708 HFGKGLVQRMPRCRHGFFHVVNNDYTHWLMYAIGGSRNPTIISQGNRFRAVDDSRFKEVT 529
HFG+GLVQRMPRCR GFFHVVNNDYTHW+MYAIGG++NPTIISQGNRF A DD KEVT
Sbjct: 285 HFGRGLVQRMPRCRSGFFHVVNNDYTHWIMYAIGGNKNPTIISQGNRFIAPDDPNAKEVT 106
Query: 528 KREYTQYSEYKNWVWKSQDDLFLNGAFFNQSGGQN 424
KREYT Y +YK WVWKSQ D+ +NGAFFN+SGGQN
Sbjct: 105 KREYTAYKDYKEWVWKSQGDVMMNGAFFNESGGQN 1
Score = 247 bits (534), Expect = 2e-064
Identities = 110/164 (67%), Positives = 116/164 (70%)
Frame = +2 / +2
Query: 425 FWPPDWLKKAPLRNRSSCDFHTQFLYSLYCVYSRLVTSLNLLSSTARKRLPWLMMVGFRL 604
F PPD LKKAP S CDF T L SLY VYS LVTSL L SS A R PWLMMVGF
Sbjct: 2 FCPPDSLKKAPFIMTSPCDFQTHSL*SLYAVYSLLVTSLALGSSGAMNRFPWLMMVGFLF 181
Query: 605 PPMAYMSQCV*SLFTTWKKP*RQRGIRCTSPLPKWLKATVTCISLSLDAASLAPNSITWS 784
PPMAYM QCV*SLFTTWK P R RGIRCTSPLPKWL ATV CI+ S + L PNSITWS
Sbjct: 182 PPMAYMIQCV*SLFTTWKNPDRHRGIRCTSPLPKWLNATVICITSSCGLSLLGPNSITWS 361
Query: 785 CLVKWPLETVMAVEPSTASTSPSAQLLMDRWSIQISLDPITETP 916
VKW L+TV+AV+P T S SPSA L M+ WSI LD TE P
Sbjct: 362 WCVKWLLDTVIAVDPFTTSMSPSAHLDMETWSIHTWLDHSTEMP 493
>gb|CW333051.1|CW333051 104_830_11481737_148_36039_065 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11481737, DNA
sequence
Length = 629
Score = 261 bits (565), Expect = 1e-068
Identities = 108/130 (83%), Positives = 112/130 (86%)
Frame = +2 / -3
Query: 731 ISLSLDAASLAPNSITWSCLVKWPLETVMAVEPSTASTSPSAQLLMDRWSIQISLDPITE 910
I+LSL AASLAPNSITWSCLVKWPLE V AVEPST STSPSAQL +D WSIQ+SLDPITE
Sbjct: 627 IALSLTAASLAPNSITWSCLVKWPLEMVTAVEPSTTSTSPSAQLRIDTWSIQMSLDPITE 448
Query: 911 TPSPSLSPRTPQWCCESRIAPPPCAAASWTCRLWRITLRTFCSVICAPTMCTCAPRPSMV 1090
TPSPSLSPR PQWC ES I PPP AASW RLWRIT RTFCSVICAPT CTCAPRPSMV
Sbjct: 447 TPSPSLSPRRPQWCFESLITPPPRGAASWMWRLWRITFRTFCSVICAPTTCTCAPRPSMV 268
Query: 1091 LSLLTMSSWQ 1120
LSL+T SS Q
Sbjct: 267 LSLVTSSSLQ 238
Score = 221 bits (478), Expect = 1e-056
Identities = 91/133 (68%), Positives = 102/133 (76%)
Frame = -3 / +2
Query: 1128 VELCQELIVSSDKTIDGRGAQVHIVGAQITLQNVRNVILHNLXXXXXXXXXXXAIRDSQH 949
+ LC+EL+V+SDKTIDGRGAQVH+VGAQITLQNVRNVILHNL IRDS+H
Sbjct: 230 INLCRELLVTSDKTIDGRGAQVHVVGAQITLQNVRNVILHNLHIHDAAPRGGGVIRDSKH 409
Query: 948 HWGVRXXXXXXXXXXXXXXDIWIDHLSMSSCADGLVDAVDGSTAITVSNGHFTRHDHVML 769
HWG+R DIWIDH+SM SCADGLVD VDGSTA+T+SNGHFTRHDHVML
Sbjct: 410 HWGLRGESDGDGVSVMGSSDIWIDHVSMRSCADGLVDVVDGSTAVTISNGHFTRHDHVML 589
Query: 768 FGASDAASKDREM 730
FGASDAA KD+ M
Sbjct: 590 FGASDAAVKDKAM 628
Score = 85.4 bits (180), Expect(2) = 4e-029
Identities = 36/61 (59%), Positives = 38/61 (62%)
Frame = +1 / -2
Query: 730 HLPVLGRGVAGPEQHNVVVPREXXXXXXXXXXXXHRVHQPVRAAAHGQVVDPDIAGPHHG 909
H VL GVAG EQH+VVVP E H VHQPV AA H VVDPD+AGPHHG
Sbjct: 628 HRLVLDGGVAGTEQHHVVVPGEVAVGDGHGGGAVHHVHQPVGAAPHRHVVDPDVAGPHHG 449
Query: 910 D 912
D
Sbjct: 448 D 446
Score = 64.8 bits (135), Expect(2) = 4e-029
Identities = 26/32 (81%), Positives = 29/32 (90%)
Frame = +1 / -2
Query: 1033 LQRDLRAHDVHLRSAPVDGLVAAHDELLAELD 1128
LQRDLRAHDVHLR+APVDGLVA H +L AE+D
Sbjct: 325 LQRDLRAHDVHLRAAPVDGLVAGHQQLPAEVD 230
>gb|CW266971.1|CW266971 104_737_11400437_148_35293_031 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11400437, DNA
sequence
Length = 670
Score = 230 bits (497), Expect(2) = 2e-065
Identities = 99/173 (57%), Positives = 113/173 (65%)
Frame = -3 / -2
Query: 1053 GAQITLQNVRNVILHNLXXXXXXXXXXXAIRDSQHHWGVRXXXXXXXXXXXXXXDIWIDH 874
GA ITLQ V NVI+HN+ +R S H+G R D+W+DH
Sbjct: 519 GACITLQYVSNVIIHNVHVHDCVPAGNANVRSSPTHYGWRTRSDGDGISLFGARDVWVDH 340
Query: 873 LSMSSCADGLVDAVDGSTAITVSNGHFTRHDHVMLFGASDAASKDREMQVTVAFNHFGKG 694
++ CADGLVDA+ GSTAITVSN +F HD VML GASDA D MQVT+AFN FG G
Sbjct: 339 CALWRCADGLVDAIMGSTAITVSNSYFAHHDEVMLLGASDAYLPDSGMQVTIAFNRFGPG 160
Query: 693 LVQRMPRCRHGFFHVVNNDYTHWLMYAIGGSRNPTIISQGNRFRAVDDSRFKE 535
LVQRMPRCR G+FH+VNNDYT W MYAIGGS NPTI SQGNR+ A D KE
Sbjct: 159 LVQRMPRCRRGYFHIVNNDYTSWEMYAIGGSANPTINSQGNRYIAPGDPNAKE 1
Score = 199 bits (430), Expect = 5e-050
Identities = 104/199 (52%), Positives = 115/199 (57%)
Frame = +2 / +2
Query: 536 SLNLLSSTARKRLPWLMMVGFRLPPMAYMSQCV*SLFTTWKKP*RQRGIRCTSPLPKWLK 715
SL S A RLPWL+MVGF LPPMAY+S V*SL T WK P R RGIRCTSP P L
Sbjct: 2 SLAFGSPGAM*RLPWLLMVGFALPPMAYISHDV*SLLTMWKYPRRHRGIRCTSPGPNRLN 181
Query: 716 ATVTCISLSLDAASLAPNSITWSCLVKWPLETVMAVEPSTASTSPSAQLLMDRWSIQISL 895
A VTCI S ASLAP+SIT S K L+TVMAV+P ASTSPSA +WS S
Sbjct: 182 AMVTCIPESGRYASLAPSSITSSWCAK*LLDTVMAVDPMMASTSPSAHRHSAQWSTHTSR 361
Query: 896 DPITETPSPSLSPRTPQWCCESRIAPPPCAAASWTCRLWRITLRTFCSVICAPTMCTCAP 1075
P +E PSPS R P E R P SWTC LW ITL T+CSV+ AP C
Sbjct: 362 APNSEMPSPSDLVRHP*CVGEDRTLALPAGTQSWTCTLWMITLDTYCSVMHAPPPPMCTR 541
Query: 1076 RPSMVLSLLTMSSWQSSTR 1132
P + L +S S R
Sbjct: 542 APRPSMVL*LFTSSSSFRR 598
Score = 41.4 bits (84), Expect(2) = 2e-065
Identities = 17/26 (65%), Positives = 22/26 (84%)
Frame = -3 / -2
Query: 1128 VELCQELIVSSDKTIDGRGAQVHIVG 1051
+ L +EL+V+S KTIDGRGA+VHI G
Sbjct: 600 IRLNEELLVNSYKTIDGRGARVHIGG 523
>gb|CW401009.1|CW401009 fsbb001f091j18f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f091j18, DNA
sequence
Length = 684
Score = 208 bits (448), Expect(2) = 6e-062
Identities = 84/126 (66%), Positives = 97/126 (76%)
Frame = -3 / -3
Query: 804 NGHFTRHDHVMLFGASDAASKDREMQVTVAFNHFGKGLVQRMPRCRHGFFHVVNNDYTHW 625
N H T H+ VMLF +SD +D+ MQ+TVAFNHFG+GLVQRMPRCR GFFHVVNNDYTHW
Sbjct: 682 NCHMTNHNDVMLFSSSDKHPEDQIMQITVAFNHFGRGLVQRMPRCRWGFFHVVNNDYTHW 503
Query: 624 LMYAIGGSRNPTIISQGNRFRAVDDSRFKEVTKREYTQYSEYKNWVWKSQDDLFLNGAFF 445
LMYAIGGS+ PTIISQGNR+ A + K VTK SE+KNWVW S++DLF+ GA F
Sbjct: 502 LMYAIGGSKAPTIISQGNRYIAPPNLAAKLVTKHHDAPESEWKNWVWHSENDLFMEGANF 323
Query: 444 NQSGGQ 427
SGGQ
Sbjct: 322 TVSGGQ 305
Score = 121 bits (258), Expect(3) = 5e-034
Identities = 56/92 (60%), Positives = 58/92 (63%)
Frame = +2 / +3
Query: 530 VTSLNLLSSTARKRLPWLMMVGFRLPPMAYMSQCV*SLFTTWKKP*RQRGIRCTSPLPKW 709
VTS A R PWLMMVG LPPMAYMSQCV*SL TTWK P R GI CT PLPKW
Sbjct: 408 VTSFAARLGGAM*RFPWLMMVGALLPPMAYMSQCV*SLLTTWKNPQRHLGILCTRPLPKW 587
Query: 710 LKATVTCISLSLDAASLAPNSITWSCLVKWPL 805
LKATV C+ S SL S+T LV W L
Sbjct: 588 LKATVICMIWSSGCLSLELKSMTSLWLVMWQL 683
Score = 51.9 bits (107), Expect(2) = 6e-062
Identities = 25/60 (41%), Positives = 31/60 (51%)
Frame = -3 / -3
Query: 450 FFNQSGGQNERKYDRLDLIQAKGGQYAESLTRYAGALNCRVGRKC*CVCSSRLQLSSLAI 271
F G + R + + DLI+ K G Y LTRYAGAL CR G+ C* + LAI
Sbjct: 325 FTVSGGQKINRNFHKKDLIKPKNGSYVTRLTRYAGALACRPGKPC*YYVLPTPRTQQLAI 146
Score = 37.7 bits (76), Expect(3) = 5e-034
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = +2 / +3
Query: 413 YLRSFWPPDWLKKAPLRNRSSCDFHTQFLYS 505
+L FWPP +K AP RS + HTQF +S
Sbjct: 291 FLLIFWPPLTVKLAPSMKRSFSECHTQFFHS 383
Score = 25.8 bits (50), Expect(3) = 5e-034
Identities = 16/29 (55%), Positives = 16/29 (55%)
Frame = +2 / +3
Query: 323 LPTRQLSAPAYLVSDSAYWPPLAWMRSSL 409
LP Q SAPAY VS P L MRS L
Sbjct: 198 LPGLQASAPAYRVSLVT*DPFLGLMRSFL 284
>gb|BE918829.1|BE918829 FM1_2_E02.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 539
Score = 225 bits (486), Expect = 9e-058
Identities = 87/119 (73%), Positives = 98/119 (82%)
Frame = -3 / +2
Query: 669 RHGFFHVVNNDYTHWLMYAIGGSRNPTIISQGNRFRAVDDSRFKEVTKREYTQYSEYKNW 490
R+GFFHVVNNDYTHW+MYAIGG++NPTIISQGNRF A DD KEVTKREYT Y +YK W
Sbjct: 2 RYGFFHVVNNDYTHWIMYAIGGNKNPTIISQGNRFIAPDDPNAKEVTKREYTAYKDYKEW 181
Query: 489 VWKSQDDLFLNGAFFNQSGGQNERKYDRLDLIQAKGGQYAESLTRYAGALNCRVGRKC* 313
VWKSQ D+ +NGAFFN+SGGQNERKYD LD I AK G+Y LTR+AG L C VG+ C*
Sbjct: 182 VWKSQGDVMMNGAFFNESGGQNERKYDELDFIPAKHGRYVGQLTRFAGPLKCIVGQPC* 358
Score = 165 bits (355), Expect = 1e-039
Identities = 80/119 (67%), Positives = 81/119 (68%)
Frame = +2 / -3
Query: 314 *HFLPTRQLSAPAYLVSDSAYWPPLAWMRSSLSYLRSFWPPDWLKKAPLRNRSSCDFHTQ 493
*H PT LS PA VS P LA M+SS SYLRSF PPD LKKAP S CDFHT
Sbjct: 357 *HGWPTMHLSGPAKRVSWPT*RPCLAGMKSSSSYLRSFCPPDSLKKAPFIMTSPCDFHTH 178
Query: 494 FLYSLYCVYSRLVTSLNLLSSTARKRLPWLMMVGFRLPPMAYMSQCV*SLFTTWKKP*R 670
L SLY VYS LVTSL L SS A R PWLMMVGF PPMAYM QCV*SLFTTWK P R
Sbjct: 177 SL*SLYAVYSLLVTSLALGSSGAMNRFPWLMMVGFLFPPMAYMIQCV*SLFTTWKNPYR 1
>gb|CW060595.1|CW060595 104_304_10519937_115_30144 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10519937, DNA
sequence
Length = 550
Score = 189 bits (408), Expect(2) = 3e-053
Identities = 80/145 (55%), Positives = 93/145 (64%)
Frame = -3 / -1
Query: 1053 GAQITLQNVRNVILHNLXXXXXXXXXXXAIRDSQHHWGVRXXXXXXXXXXXXXXDIWIDH 874
GA ITLQ V NVI+HN+ +R S H+G R D+W+DH
Sbjct: 436 GACITLQYVSNVIIHNVHVHDCVPAGNANVRSSPTHYGWRTRSDGDGISLFGARDVWVDH 257
Query: 873 LSMSSCADGLVDAVDGSTAITVSNGHFTRHDHVMLFGASDAASKDREMQVTVAFNHFGKG 694
++ CADGLVDA+ GSTAITVSN +F HD VML GASDA D MQVT+AFN FG G
Sbjct: 256 CALWRCADGLVDAIMGSTAITVSNSYFAHHDEVMLLGASDAYLPDSGMQVTIAFNRFGPG 77
Query: 693 LVQRMPRCRHGFFHVVNNDYTHWLM 619
LVQRMPRCR G+FH+VNNDYT W M
Sbjct: 76 LVQRMPRCRRGYFHIVNNDYTSWEM 2
Score = 159 bits (341), Expect = 9e-038
Identities = 85/171 (49%), Positives = 95/171 (55%)
Frame = +2 / +3
Query: 620 MSQCV*SLFTTWKKP*RQRGIRCTSPLPKWLKATVTCISLSLDAASLAPNSITWSCLVKW 799
+S V*SL T WK P R RGIRCTSP P L A VTCI S ASLAP+SIT S K
Sbjct: 3 ISHDV*SLLTMWKYPRRHRGIRCTSPGPNRLNAMVTCIPESGRYASLAPSSITSSWCAK* 182
Query: 800 PLETVMAVEPSTASTSPSAQLLMDRWSIQISLDPITETPSPSLSPRTPQWCCESRIAPPP 979
L+TVMAV+P ASTSPSA +WS S P +E PSPS R P E R P
Sbjct: 183 LLDTVMAVDPMMASTSPSAHRHSAQWSTHTSRAPNSEMPSPSDLVRHP*CVGEDRTLALP 362
Query: 980 CAAASWTCRLWRITLRTFCSVICAPTMCTCAPRPSMVLSLLTMSSWQSSTR 1132
SWTC LW ITL T+CSV+ AP C P + L +S S R
Sbjct: 363 AGTQSWTCTLWMITLDTYCSVMHAPPPPMCTRAPRPSMVL*LFTSSSSFRR 515
Score = 41.4 bits (84), Expect(2) = 3e-053
Identities = 17/26 (65%), Positives = 22/26 (84%)
Frame = -3 / -1
Query: 1128 VELCQELIVSSDKTIDGRGAQVHIVG 1051
+ L +EL+V+S KTIDGRGA+VHI G
Sbjct: 517 IRLNEELLVNSYKTIDGRGARVHIGG 440
>gb|BG560336.1|BG560336 RHIZ2_73_B09.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 557
Score = 143 bits (306), Expect(2) = 5e-049
Identities = 56/78 (71%), Positives = 64/78 (82%)
Frame = -3 / +1
Query: 765 GASDAASKDREMQVTVAFNHFGKGLVQRMPRCRHGFFHVVNNDYTHWLMYAIGGSRNPTI 586
G SD+ KD+ MQVT+AFNHFG+GL+QRMPRCRHG+FHVVNNDYTHW MYAIGGS PTI
Sbjct: 7 GHSDSYVKDKAMQVTIAFNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSAEPTI 186
Query: 585 ISQGNRFRAVDDSRFKEV 532
SQGNR+ A + KEV
Sbjct: 187 NSQGNRYLAPTNPFAKEV 240
Score = 105 bits (225), Expect = 9e-022
Identities = 48/69 (69%), Positives = 51/69 (73%)
Frame = +2 / -1
Query: 560 ARKRLPWLMMVGFRLPPMAYMSQCV*SLFTTWKKP*RQRGIRCTSPLPKWLKATVTCISL 739
AR RLPWL+MVG LPPMAY+SQ V*SLFTTWK P R GIR P PKWLKA VTCI+L
Sbjct: 212 AR*RLPWLLMVGSALPPMAYISQWV*SLFTTWK*PCRHLGIR*MRPSPKWLKAIVTCIAL 33
Query: 740 SLDAASLAP 766
S SL P
Sbjct: 32 SFT*ESLWP 6
Score = 73.9 bits (155), Expect(2) = 5e-049
Identities = 31/75 (41%), Positives = 42/75 (56%)
Frame = -3 / +1
Query: 537 EVTKREYTQYSEYKNWVWKSQDDLFLNGAFFNQSGGQNERKYDRLDLIQAKGGQYAESLT 358
+VTKR T + +K+W W+S+ DL LNGA+F SG Y R + AK ++T
Sbjct: 331 QVTKRVETAQTVWKSWNWRSEGDLLLNGAYFTPSGAGASASYSRASSLGAKSSSMVGTIT 510
Query: 357 RYAGALNCRVGRKC* 313
AGAL+C G C*
Sbjct: 511 SDAGALSCHKGAAC* 555
>gb|AC169370.3| Sorghum bicolor clone SB_BBc0011I20, WORKING DRAFT SEQUENCE, 9
unordered pieces
Length = 143922
Score = 111 bits (236), Expect(5) = 6e-041
Identities = 40/73 (54%), Positives = 53/73 (72%)
Frame = -3 / -1
Query: 888 IWIDHLSMSSCADGLVDAVDGSTAITVSNGHFTRHDHVMLFGASDAASKDREMQVTVAFN 709
+W+DH ++ +CADGL+D DGST +T+SN H+ ML G SD + D+ M+VTVAFN
Sbjct: 48093 VWVDHCTLEACADGLIDVTDGSTNVTLSNNVLRNHNKTMLLGHSDDFTDDKNMKVTVAFN 47914
Query: 708 HFGKGLVQRMPRC 670
FG GL+QRMPRC
Sbjct: 47913 RFGPGLIQRMPRC 47875
Score = 55.1 bits (114), Expect(5) = 6e-041
Identities = 21/38 (55%), Positives = 25/38 (65%)
Frame = -3 / -1
Query: 546 RFKEVTKREYTQYSEYKNWVWKSQDDLFLNGAFFNQSG 433
+F +VTKRE SE+ W W S+DD LNGAFF SG
Sbjct: 16107 KFLQVTKREGAPDSEWSKWTWISEDDTMLNGAFFTSSG 15994
Score = 48.7 bits (100), Expect(5) = 6e-041
Identities = 16/24 (66%), Positives = 19/24 (79%)
Frame = -3 / -3
Query: 675 RCRHGFFHVVNNDYTHWLMYAIGG 604
RCR G FHV+ NDY +W +YAIGG
Sbjct: 16465 RCRFGLFHVIKNDYINWEIYAIGG 16394
Score = 35.4 bits (71), Expect(5) = 6e-041
Identities = 13/18 (72%), Positives = 17/18 (94%)
Frame = -3 / -1
Query: 1116 QELIVSSDKTIDGRGAQV 1063
Q+L+V+SDKT+DGRGA V
Sbjct: 48300 QDLVVASDKTVDGRGAGV 48247
Score = 29.0 bits (57), Expect(5) = 6e-041
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = -3 / -1
Query: 606 GSRNPTIISQGNRFRA 559
GS +PTI+S GNRF A
Sbjct: 16395 GSASPTILSHGNRFLA 16348
>gb|CL189041.1|CL189041 104_406_10902014_114_32468_063 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10902014, DNA
sequence
Length = 660
Score = 89.5 bits (189), Expect(3) = 2e-038
Identities = 35/48 (72%), Positives = 38/48 (79%)
Frame = -3 / -1
Query: 675 RCRHGFFHVVNNDYTHWLMYAIGGSRNPTIISQGNRFRAVDDSRFKEV 532
RCRHG+FHVVNNDYTHW MYAIGGS PTI SQGNR+ A + KEV
Sbjct: 423 RCRHGYFHVVNNDYTHWEMYAIGGSAEPTINSQGNRYLAPTNPFAKEV 280
Score = 57.4 bits (119), Expect(3) = 2e-038
Identities = 23/60 (38%), Positives = 33/60 (55%)
Frame = -3 / -1
Query: 537 EVTKREYTQYSEYKNWVWKSQDDLFLNGAFFNQSGGQNERKYDRLDLIQAKGGQYAESLT 358
+VTKR T + +K+W W+S+ DL LNGA+F SG Y R + AK ++T
Sbjct: 189 QVTKRVETAQTVWKSWNWRSEGDLLLNGAYFTPSGAGASASYSRASSLGAKSSSMVGTIT 10
Score = 57.0 bits (118), Expect(3) = 2e-038
Identities = 21/29 (72%), Positives = 26/29 (89%)
Frame = -3 / -2
Query: 759 SDAASKDREMQVTVAFNHFGKGLVQRMPR 673
SD+ KD+ MQVT+AFNHFG+GL+QRMPR
Sbjct: 656 SDSYVKDKAMQVTIAFNHFGEGLIQRMPR 570
>gb|CW214306.1|CW214306 104_646_11193944_148_37053_028 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11193944, DNA
sequence
Length = 703
Score = 111 bits (236), Expect(3) = 3e-035
Identities = 40/73 (54%), Positives = 53/73 (72%)
Frame = -3 / +2
Query: 888 IWIDHLSMSSCADGLVDAVDGSTAITVSNGHFTRHDHVMLFGASDAASKDREMQVTVAFN 709
+W+DH ++ +CADGL+D DGST +T+SN H+ ML G SD + D+ M+VTVAFN
Sbjct: 104 VWVDHCTLEACADGLIDVTDGSTNVTLSNNVLRNHNKTMLLGHSDDFTDDKNMKVTVAFN 283
Query: 708 HFGKGLVQRMPRC 670
FG GL+QRMPRC
Sbjct: 284 RFGPGLIQRMPRC 322
Score = 48.7 bits (100), Expect(3) = 3e-035
Identities = 16/24 (66%), Positives = 19/24 (79%)
Frame = -3 / +3
Query: 675 RCRHGFFHVVNNDYTHWLMYAIGG 604
RCR G FHV+ NDY +W +YAIGG
Sbjct: 444 RCRFGLFHVIKNDYINWEIYAIGG 515
Score = 29.0 bits (57), Expect(3) = 3e-035
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = -3 / +1
Query: 606 GSRNPTIISQGNRFRA 559
GS +PTI+S GNRF A
Sbjct: 514 GSASPTILSHGNRFLA 561
>gb|CW160114.1|CW160114 104_566_11149711_148_36427_024 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11149711, DNA
sequence
Length = 706
Score = 117 bits (250), Expect(2) = 2e-034
Identities = 50/106 (47%), Positives = 63/106 (59%)
Frame = -3 / -3
Query: 1053 GAQITLQNVRNVILHNLXXXXXXXXXXXAIRDSQHHWGVRXXXXXXXXXXXXXXDIWIDH 874
GA IT+Q RNVI+HNL +RDS H G R ++WIDH
Sbjct: 323 GAGITVQLARNVIIHNLHVHDVLHSMGGLMRDSPTHVGSRTKADGDGISLFQATNVWIDH 144
Query: 873 LSMSSCADGLVDAVDGSTAITVSNGHFTRHDHVMLFGASDAASKDR 736
+SMS+C DGL+D V ST IT+SN HFT H+ VMLFGASD+ +D+
Sbjct: 143 ISMSNCEDGLIDVVQSSTGITISNCHFTNHNDVMLFGASDSYPQDQ 6
Score = 116 bits (249), Expect(2) = 4e-034
Identities = 55/100 (55%), Positives = 63/100 (63%)
Frame = +2 / +1
Query: 755 SLAPNSITWSCLVKWPLETVMAVEPSTASTSPSAQLLMDRWSIQISLDPITETPSPSLSP 934
SLAPNSIT LVKW LE V+ VE T S SPS+QL M+ WSI + +E PSPS
Sbjct: 25 SLAPNSITSLWLVKWQLEMVIPVELCTTSMSPSSQLDMEMWSIHTLVAWNSEMPSPSALV 204
Query: 935 RTPQWCCESRIAPPPCAAASWTCRLWRITLRTFCSVICAP 1054
R P ESRI PP + SWTCRLW IT R C+V+ AP
Sbjct: 205 RDPTCVGESRIRPPMECSTSWTCRLWMITFRASCTVMPAP 324
Score = 50.6 bits (104), Expect(2) = 2e-034
Identities = 20/24 (83%), Positives = 23/24 (95%)
Frame = -3 / -3
Query: 1128 VELCQELIVSSDKTIDGRGAQVHI 1057
++L QEL+VSSDKTIDGRGAQVHI
Sbjct: 401 IQLSQELLVSSDKTIDGRGAQVHI 330
Score = 50.1 bits (103), Expect(2) = 4e-034
Identities = 20/24 (83%), Positives = 22/24 (91%)
Frame = +1 / +3
Query: 1057 DVHLRSAPVDGLVAAHDELLAELD 1128
DVHLR+APVDGLVAAH +LL ELD
Sbjct: 330 DVHLRAAPVDGLVAAHQQLLRELD 401
>gb|BG240961.1|BG240961 OV1_40_D10.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 603
Score = 137 bits (293), Expect = 4e-031
Identities = 53/76 (69%), Positives = 60/76 (78%)
Frame = -3 / +1
Query: 540 KEVTKREYTQYSEYKNWVWKSQDDLFLNGAFFNQSGGQNERKYDRLDLIQAKGGQYAESL 361
KEVTKREYT Y +YK WVWKSQ D+ +NGAFFN+SGGQNERKYD LD I AK G+Y L
Sbjct: 160 KEVTKREYTAYKDYKEWVWKSQGDVMMNGAFFNESGGQNERKYDELDFIPAKHGRYVGQL 339
Query: 360 TRYAGALNCRVGRKC* 313
TR+AG L C VG+ C*
Sbjct: 340 TRFAGPLKCIVGQPC* 387
>gb|BG240970.1|BG240970 OV1_40_E09.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 602
Score = 137 bits (293), Expect = 4e-031
Identities = 53/76 (69%), Positives = 60/76 (78%)
Frame = -3 / +3
Query: 540 KEVTKREYTQYSEYKNWVWKSQDDLFLNGAFFNQSGGQNERKYDRLDLIQAKGGQYAESL 361
KEVTKREYT Y +YK WVWKSQ D+ +NGAFFN+SGGQNERKYD LD I AK G+Y L
Sbjct: 159 KEVTKREYTAYKDYKEWVWKSQGDVMMNGAFFNESGGQNERKYDELDFIPAKHGRYVGQL 338
Query: 360 TRYAGALNCRVGRKC* 313
TR+AG L C VG+ C*
Sbjct: 339 TRFAGPLKCIVGQPC* 386
>gb|CW368387.1|CW368387 fsbb001f042f08k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f042f08, DNA
sequence
Length = 536
Score = 111 bits (236), Expect(2) = 4e-028
Identities = 40/73 (54%), Positives = 53/73 (72%)
Frame = -3 / -3
Query: 888 IWIDHLSMSSCADGLVDAVDGSTAITVSNGHFTRHDHVMLFGASDAASKDREMQVTVAFN 709
+W+DH ++ +CADGL+D DGST +T+SN H+ ML G SD + D+ M+VTVAFN
Sbjct: 324 VWVDHCTLEACADGLIDVTDGSTNVTLSNNVLRNHNKTMLLGHSDDFTDDKNMKVTVAFN 145
Query: 708 HFGKGLVQRMPRC 670
FG GL+QRMPRC
Sbjct: 144 RFGPGLIQRMPRC 106
Score = 38.2 bits (77), Expect(2) = 4e-028
Identities = 16/33 (48%), Positives = 23/33 (69%)
Frame = -3 / -3
Query: 1116 QELIVSSDKTIDGRGAQVHIVGAQITLQNVRNV 1018
Q+L+V+SDKT+DGRG + +VG +RNV
Sbjct: 534 QDLVVASDKTVDGRGPRAWVVGDGGACFVLRNV 436
>gb|CL189042.1|CL189042 104_406_10902014_116_32472_063 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10902014, DNA
sequence
Length = 717
Score = 83.5 bits (176), Expect(2) = 1e-027
Identities = 31/39 (79%), Positives = 33/39 (84%)
Frame = -3 / +3
Query: 675 RCRHGFFHVVNNDYTHWLMYAIGGSRNPTIISQGNRFRA 559
RCRHG+FHVVNNDYTHW MYAIGGS PT SQGNR+ A
Sbjct: 588 RCRHGYFHVVNNDYTHWEMYAIGGSAEPTHHSQGNRYLA 704
Score = 64.8 bits (135), Expect(2) = 1e-027
Identities = 25/35 (71%), Positives = 30/35 (85%)
Frame = -3 / +1
Query: 777 VMLFGASDAASKDREMQVTVAFNHFGKGLVQRMPR 673
VML G SD+ KD+ MQVT+AFNHFG+GL+QRMPR
Sbjct: 337 VMLLGHSDSYVKDKAMQVTIAFNHFGEGLIQRMPR 441
>gb|CW160113.1|CW160113 104_566_11149711_116_36428_024 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11149711, DNA
sequence
Length = 709
Score = 93.2 bits (197), Expect(2) = 5e-027
Identities = 44/87 (50%), Positives = 52/87 (59%)
Frame = +2 / -3
Query: 794 KWPLETVMAVEPSTASTSPSAQLLMDRWSIQISLDPITETPSPSLSPRTPQWCCESRIAP 973
K LE V+ VE T S SPS+QL M+ WSI + +E PSPS R P ESRI P
Sbjct: 707 KCSLEMVIPVELCTTSMSPSSQLDMEMWSIHTLVAWNSEMPSPSALVRDPTCVGESRIRP 528
Query: 974 PPCAAASWTCRLWRITLRTFCSVICAP 1054
P + SWTCRLW IT R C+V+ AP
Sbjct: 527 PMECSTSWTCRLWMITFRASCTVMPAP 447
Score = 87.7 bits (185), Expect(2) = 1e-025
Identities = 38/87 (43%), Positives = 47/87 (54%)
Frame = -3 / +1
Query: 1053 GAQITLQNVRNVILHNLXXXXXXXXXXXAIRDSQHHWGVRXXXXXXXXXXXXXXDIWIDH 874
GA IT+Q RNVI+HNL +RDS H G R ++WIDH
Sbjct: 448 GAGITVQLARNVIIHNLHVHDVLHSMGGLMRDSPTHVGSRTKADGDGISLFQATNVWIDH 627
Query: 873 LSMSSCADGLVDAVDGSTAITVSNGHF 793
+SMS+C DGL+D V ST IT+S HF
Sbjct: 628 ISMSNCEDGLIDVVQSSTGITISKLHF 708
Score = 50.6 bits (104), Expect(2) = 1e-025
Identities = 20/24 (83%), Positives = 23/24 (95%)
Frame = -3 / +1
Query: 1128 VELCQELIVSSDKTIDGRGAQVHI 1057
++L QEL+VSSDKTIDGRGAQVHI
Sbjct: 370 IQLSQELLVSSDKTIDGRGAQVHI 441
Score = 50.1 bits (103), Expect(2) = 5e-027
Identities = 20/24 (83%), Positives = 22/24 (91%)
Frame = +1 / -2
Query: 1057 DVHLRSAPVDGLVAAHDELLAELD 1128
DVHLR+APVDGLVAAH +LL ELD
Sbjct: 441 DVHLRAAPVDGLVAAHQQLLRELD 370
>gb|BZ350471.1|BZ350471 ht56g09.g1 WGS-SbicolorF (JM107 adapted methyl filtered) Sorghum
bicolor genomic clone ht56g09 5', DNA sequence
Length = 596
Score = 104 bits (221), Expect(2) = 5e-027
Identities = 43/69 (62%), Positives = 50/69 (72%)
Frame = -3 / -1
Query: 633 THWLMYAIGGSRNPTIISQGNRFRAVDDSRFKEVTKREYTQYSEYKNWVWKSQDDLFLNG 454
THWLMYAIGGS+ PTIISQGNR+ A + K VTK SE+KNWVW S++DLF+ G
Sbjct: 596 THWLMYAIGGSKAPTIISQGNRYIAPPNLAAKLVTKHHDAPESEWKNWVWHSENDLFMEG 417
Query: 453 AFFNQSGGQ 427
A F SGGQ
Sbjct: 416 ANFTVSGGQ 390
Score = 39.1 bits (79), Expect(2) = 5e-027
Identities = 17/37 (45%), Positives = 21/37 (56%)
Frame = -3 / -1
Query: 450 FFNQSGGQNERKYDRLDLIQAKGGQYAESLTRYAGAL 340
F G + R + + DLI+ K G Y LTRYAGAL
Sbjct: 410 FTVSGGQKINRNFHKKDLIKPKNGSYVTRLTRYAGAL 300
>gb|CW328836.1|CW328836 104_825_11479519_148_36000_030 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11479519, DNA
sequence
Length = 712
Score = 99.1 bits (210), Expect(2) = 2e-025
Identities = 40/94 (42%), Positives = 54/94 (57%)
Frame = -3 / -3
Query: 1053 GAQITLQNVRNVILHNLXXXXXXXXXXXAIRDSQHHWGVRXXXXXXXXXXXXXXDIWIDH 874
GA IT+Q + NVI+H L +R S H+G R +W+DH
Sbjct: 398 GACITIQYITNVIIHGLHIHDCKPTGNAMVRSSPSHYGWRTMADGDAVSIFGSSHVWVDH 219
Query: 873 LSMSSCADGLVDAVDGSTAITVSNGHFTRHDHVM 772
S+S+CADGL+DA+ GSTAITVSN +FT H+ V+
Sbjct: 218 CSLSNCADGLIDAIMGSTAITVSNNYFTHHNEVV 117
Score = 38.6 bits (78), Expect(2) = 2e-025
Identities = 16/24 (66%), Positives = 20/24 (83%)
Frame = -3 / -3
Query: 1128 VELCQELIVSSDKTIDGRGAQVHI 1057
+ L +ELI++S KTIDGRGA VHI
Sbjct: 476 ITLKEELIMNSFKTIDGRGANVHI 405
>gb|CW100366.1|CW100366 104_467_11004060_116_34389_036 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11004060, DNA
sequence
Length = 530
Score = 101 bits (215), Expect(2) = 2e-024
Identities = 37/70 (52%), Positives = 50/70 (71%)
Frame = -3 / -1
Query: 888 IWIDHLSMSSCADGLVDAVDGSTAITVSNGHFTRHDHVMLFGASDAASKDREMQVTVAFN 709
+W+DH ++ +CADGL+D DGST +T+SN H+ ML G SD + D+ M+VTVAFN
Sbjct: 212 VWVDHCTLEACADGLIDVTDGSTNVTLSNNVLRNHNKTMLLGHSDDFTDDKNMKVTVAFN 33
Query: 708 HFGKGLVQRM 679
FG GL+QRM
Sbjct: 32 RFGPGLIQRM 3
Score = 35.4 bits (71), Expect(2) = 2e-024
Identities = 13/18 (72%), Positives = 17/18 (94%)
Frame = -3 / -1
Query: 1116 QELIVSSDKTIDGRGAQV 1063
Q+L+V+SDKT+DGRGA V
Sbjct: 419 QDLVVASDKTVDGRGAGV 366
>gb|CW214305.1|CW214305 104_646_11193944_116_37049_028 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11193944, DNA
sequence
Length = 550
Score = 73.9 bits (155), Expect(3) = 6e-024
Identities = 30/54 (55%), Positives = 37/54 (68%)
Frame = -3 / -3
Query: 831 DGSTAITVSNGHFTRHDHVMLFGASDAASKDREMQVTVAFNHFGKGLVQRMPRC 670
DGST +T+SN H+ ML SD + D+ M+VTVAFN FG GL+QRMPRC
Sbjct: 545 DGSTNVTLSNNVLRNHNKTMLLVHSDDFTDDKNMKVTVAFNRFGPGLIQRMPRC 384
Score = 48.7 bits (100), Expect(3) = 6e-024
Identities = 16/24 (66%), Positives = 19/24 (79%)
Frame = -3 / -1
Query: 675 RCRHGFFHVVNNDYTHWLMYAIGG 604
RCR G FHV+ NDY +W +YAIGG
Sbjct: 262 RCRFGLFHVIKNDYINWEIYAIGG 191
Score = 31.3 bits (62), Expect(3) = 6e-024
Identities = 12/16 (75%), Positives = 14/16 (87%)
Frame = -3 / -2
Query: 606 GSRNPTIISQGNRFRA 559
GS +PTI+SQGNRF A
Sbjct: 192 GSASPTILSQGNRFLA 145
>gb|AW565306.1|AW565306 LG1_342_G08.g1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 686
Score = 111 bits (238), Expect = 2e-023
Identities = 43/45 (95%), Positives = 44/45 (97%)
Frame = -3 / +3
Query: 135 SLHASIDALGSCYGDKQGRKYRAWVDRLFITQTGSDSWVGRFDLW 1
SLHASIDALGSCYGDKQG+KYRAWVDRLFITQTGSDSWV RFDLW
Sbjct: 186 SLHASIDALGSCYGDKQGKKYRAWVDRLFITQTGSDSWVVRFDLW 320
Score = 111 bits (237), Expect = 2e-023
Identities = 43/45 (95%), Positives = 43/45 (95%)
Frame = +3 / -3
Query: 3 TSQTSPPNYLNQSV**KVCPPMLGTFSLVCHHNMIPTHQWMHGVR 137
TSQ SPPNYLNQSV**KVCPPMLGTFSLVCHHNMIP HQWMHGVR
Sbjct: 318 TSQISPPNYLNQSV**KVCPPMLGTFSLVCHHNMIPMHQWMHGVR 184
Score = 111 bits (236), Expect = 3e-023
Identities = 43/45 (95%), Positives = 45/45 (100%)
Frame = -2 / +2
Query: 136 LTPCIH*CVGIMLW*QTREKVPSMGGQTFYHTDWFR*LGGEV*LV 2
LTPCIH*C+GIMLW*QTREKVPSMGGQTFYHTDWFR*LGGE+*LV
Sbjct: 185 LTPCIH*CIGIMLW*QTREKVPSMGGQTFYHTDWFR*LGGEI*LV 319
Score = 110 bits (234), Expect = 5e-023
Identities = 41/45 (91%), Positives = 42/45 (93%)
Frame = -1 / +1
Query: 137 SHSMHPLMRWDHVMVTNKGESTEHGWTDFLSHRLVQIVGWGGLTC 3
SHSMHPLM WDHVMVTNKG+STEHGWTDFLSHRLVQIVGW LTC
Sbjct: 184 SHSMHPLMHWDHVMVTNKGKSTEHGWTDFLSHRLVQIVGW*DLTC 318
Score = 108 bits (231), Expect = 1e-022
Identities = 43/45 (95%), Positives = 43/45 (95%)
Frame = +2 / -2
Query: 2 HKSNLPTQLSEPVCVIKSLSTHARYFLPCLSP*HDPNASMDAWSE 136
HKSNL TQLSEPVCVIKSLSTHARYF PCLSP*HDPNASMDAWSE
Sbjct: 319 HKSNLTTQLSEPVCVIKSLSTHARYFFPCLSP*HDPNASMDAWSE 185
>gb|BE918689.1|BE918689 FM1_1_D02.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 632
Score = 111 bits (238), Expect = 2e-023
Identities = 43/45 (95%), Positives = 44/45 (97%)
Frame = -3 / +2
Query: 135 SLHASIDALGSCYGDKQGRKYRAWVDRLFITQTGSDSWVGRFDLW 1
SLHASIDALGSCYGDKQG+KYRAWVDRLFITQTGSDSWV RFDLW
Sbjct: 182 SLHASIDALGSCYGDKQGKKYRAWVDRLFITQTGSDSWVVRFDLW 316
Score = 111 bits (237), Expect = 2e-023
Identities = 43/45 (95%), Positives = 43/45 (95%)
Frame = +3 / -1
Query: 3 TSQTSPPNYLNQSV**KVCPPMLGTFSLVCHHNMIPTHQWMHGVR 137
TSQ SPPNYLNQSV**KVCPPMLGTFSLVCHHNMIP HQWMHGVR
Sbjct: 314 TSQISPPNYLNQSV**KVCPPMLGTFSLVCHHNMIPMHQWMHGVR 180
Score = 111 bits (236), Expect = 3e-023
Identities = 43/45 (95%), Positives = 45/45 (100%)
Frame = -2 / +1
Query: 136 LTPCIH*CVGIMLW*QTREKVPSMGGQTFYHTDWFR*LGGEV*LV 2
LTPCIH*C+GIMLW*QTREKVPSMGGQTFYHTDWFR*LGGE+*LV
Sbjct: 181 LTPCIH*CIGIMLW*QTREKVPSMGGQTFYHTDWFR*LGGEI*LV 315
Score = 110 bits (234), Expect = 5e-023
Identities = 41/45 (91%), Positives = 42/45 (93%)
Frame = -1 / +3
Query: 137 SHSMHPLMRWDHVMVTNKGESTEHGWTDFLSHRLVQIVGWGGLTC 3
SHSMHPLM WDHVMVTNKG+STEHGWTDFLSHRLVQIVGW LTC
Sbjct: 180 SHSMHPLMHWDHVMVTNKGKSTEHGWTDFLSHRLVQIVGW*DLTC 314
Score = 108 bits (231), Expect = 1e-022
Identities = 43/45 (95%), Positives = 43/45 (95%)
Frame = +2 / -3
Query: 2 HKSNLPTQLSEPVCVIKSLSTHARYFLPCLSP*HDPNASMDAWSE 136
HKSNL TQLSEPVCVIKSLSTHARYF PCLSP*HDPNASMDAWSE
Sbjct: 315 HKSNLTTQLSEPVCVIKSLSTHARYFFPCLSP*HDPNASMDAWSE 181
>gb|BF656799.1|BF656799 OV2_23_A09.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 633
Score = 111 bits (238), Expect = 2e-023
Identities = 43/45 (95%), Positives = 44/45 (97%)
Frame = -3 / +1
Query: 135 SLHASIDALGSCYGDKQGRKYRAWVDRLFITQTGSDSWVGRFDLW 1
SLHASIDALGSCYGDKQG+KYRAWVDRLFITQTGSDSWV RFDLW
Sbjct: 160 SLHASIDALGSCYGDKQGKKYRAWVDRLFITQTGSDSWVVRFDLW 294
Score = 111 bits (237), Expect = 2e-023
Identities = 43/45 (95%), Positives = 43/45 (95%)
Frame = +3 / -3
Query: 3 TSQTSPPNYLNQSV**KVCPPMLGTFSLVCHHNMIPTHQWMHGVR 137
TSQ SPPNYLNQSV**KVCPPMLGTFSLVCHHNMIP HQWMHGVR
Sbjct: 292 TSQISPPNYLNQSV**KVCPPMLGTFSLVCHHNMIPMHQWMHGVR 158
Score = 111 bits (236), Expect = 3e-023
Identities = 43/45 (95%), Positives = 45/45 (100%)
Frame = -2 / +3
Query: 136 LTPCIH*CVGIMLW*QTREKVPSMGGQTFYHTDWFR*LGGEV*LV 2
LTPCIH*C+GIMLW*QTREKVPSMGGQTFYHTDWFR*LGGE+*LV
Sbjct: 159 LTPCIH*CIGIMLW*QTREKVPSMGGQTFYHTDWFR*LGGEI*LV 293
Score = 110 bits (234), Expect = 5e-023
Identities = 41/45 (91%), Positives = 42/45 (93%)
Frame = -1 / +2
Query: 137 SHSMHPLMRWDHVMVTNKGESTEHGWTDFLSHRLVQIVGWGGLTC 3
SHSMHPLM WDHVMVTNKG+STEHGWTDFLSHRLVQIVGW LTC
Sbjct: 158 SHSMHPLMHWDHVMVTNKGKSTEHGWTDFLSHRLVQIVGW*DLTC 292
Score = 108 bits (231), Expect = 1e-022
Identities = 43/45 (95%), Positives = 43/45 (95%)
Frame = +2 / -2
Query: 2 HKSNLPTQLSEPVCVIKSLSTHARYFLPCLSP*HDPNASMDAWSE 136
HKSNL TQLSEPVCVIKSLSTHARYF PCLSP*HDPNASMDAWSE
Sbjct: 293 HKSNLTTQLSEPVCVIKSLSTHARYFFPCLSP*HDPNASMDAWSE 159
>gb|BG053597.1|BG053597 RHIZ2_11_C10.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 589
Score = 111 bits (238), Expect = 2e-023
Identities = 43/45 (95%), Positives = 44/45 (97%)
Frame = -3 / +3
Query: 135 SLHASIDALGSCYGDKQGRKYRAWVDRLFITQTGSDSWVGRFDLW 1
SLHASIDALGSCYGDKQG+KYRAWVDRLFITQTGSDSWV RFDLW
Sbjct: 81 SLHASIDALGSCYGDKQGKKYRAWVDRLFITQTGSDSWVVRFDLW 215
Score = 111 bits (237), Expect = 2e-023
Identities = 43/45 (95%), Positives = 43/45 (95%)
Frame = +3 / -2
Query: 3 TSQTSPPNYLNQSV**KVCPPMLGTFSLVCHHNMIPTHQWMHGVR 137
TSQ SPPNYLNQSV**KVCPPMLGTFSLVCHHNMIP HQWMHGVR
Sbjct: 213 TSQISPPNYLNQSV**KVCPPMLGTFSLVCHHNMIPMHQWMHGVR 79
Score = 111 bits (236), Expect = 3e-023
Identities = 43/45 (95%), Positives = 45/45 (100%)
Frame = -2 / +2
Query: 136 LTPCIH*CVGIMLW*QTREKVPSMGGQTFYHTDWFR*LGGEV*LV 2
LTPCIH*C+GIMLW*QTREKVPSMGGQTFYHTDWFR*LGGE+*LV
Sbjct: 80 LTPCIH*CIGIMLW*QTREKVPSMGGQTFYHTDWFR*LGGEI*LV 214
Score = 110 bits (234), Expect = 5e-023
Identities = 41/45 (91%), Positives = 42/45 (93%)
Frame = -1 / +1
Query: 137 SHSMHPLMRWDHVMVTNKGESTEHGWTDFLSHRLVQIVGWGGLTC 3
SHSMHPLM WDHVMVTNKG+STEHGWTDFLSHRLVQIVGW LTC
Sbjct: 79 SHSMHPLMHWDHVMVTNKGKSTEHGWTDFLSHRLVQIVGW*DLTC 213
Score = 108 bits (231), Expect = 1e-022
Identities = 43/45 (95%), Positives = 43/45 (95%)
Frame = +2 / -1
Query: 2 HKSNLPTQLSEPVCVIKSLSTHARYFLPCLSP*HDPNASMDAWSE 136
HKSNL TQLSEPVCVIKSLSTHARYF PCLSP*HDPNASMDAWSE
Sbjct: 214 HKSNLTTQLSEPVCVIKSLSTHARYFFPCLSP*HDPNASMDAWSE 80
>gb|BG103538.1|BG103538 RHIZ2_37_G03.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 568
Score = 111 bits (238), Expect = 2e-023
Identities = 43/45 (95%), Positives = 44/45 (97%)
Frame = -3 / +2
Query: 135 SLHASIDALGSCYGDKQGRKYRAWVDRLFITQTGSDSWVGRFDLW 1
SLHASIDALGSCYGDKQG+KYRAWVDRLFITQTGSDSWV RFDLW
Sbjct: 95 SLHASIDALGSCYGDKQGKKYRAWVDRLFITQTGSDSWVVRFDLW 229
Score = 111 bits (237), Expect = 2e-023
Identities = 43/45 (95%), Positives = 43/45 (95%)
Frame = +3 / -3
Query: 3 TSQTSPPNYLNQSV**KVCPPMLGTFSLVCHHNMIPTHQWMHGVR 137
TSQ SPPNYLNQSV**KVCPPMLGTFSLVCHHNMIP HQWMHGVR
Sbjct: 227 TSQISPPNYLNQSV**KVCPPMLGTFSLVCHHNMIPMHQWMHGVR 93
Score = 111 bits (236), Expect = 3e-023
Identities = 43/45 (95%), Positives = 45/45 (100%)
Frame = -2 / +1
Query: 136 LTPCIH*CVGIMLW*QTREKVPSMGGQTFYHTDWFR*LGGEV*LV 2
LTPCIH*C+GIMLW*QTREKVPSMGGQTFYHTDWFR*LGGE+*LV
Sbjct: 94 LTPCIH*CIGIMLW*QTREKVPSMGGQTFYHTDWFR*LGGEI*LV 228
Score = 110 bits (234), Expect = 5e-023
Identities = 41/45 (91%), Positives = 42/45 (93%)
Frame = -1 / +3
Query: 137 SHSMHPLMRWDHVMVTNKGESTEHGWTDFLSHRLVQIVGWGGLTC 3
SHSMHPLM WDHVMVTNKG+STEHGWTDFLSHRLVQIVGW LTC
Sbjct: 93 SHSMHPLMHWDHVMVTNKGKSTEHGWTDFLSHRLVQIVGW*DLTC 227
Score = 108 bits (231), Expect = 1e-022
Identities = 43/45 (95%), Positives = 43/45 (95%)
Frame = +2 / -2
Query: 2 HKSNLPTQLSEPVCVIKSLSTHARYFLPCLSP*HDPNASMDAWSE 136
HKSNL TQLSEPVCVIKSLSTHARYF PCLSP*HDPNASMDAWSE
Sbjct: 228 HKSNLTTQLSEPVCVIKSLSTHARYFFPCLSP*HDPNASMDAWSE 94
>gb|BG241621.1|BG241621 RHIZ2_17_G12.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 619
Score = 111 bits (238), Expect = 2e-023
Identities = 43/45 (95%), Positives = 44/45 (97%)
Frame = -3 / +1
Query: 135 SLHASIDALGSCYGDKQGRKYRAWVDRLFITQTGSDSWVGRFDLW 1
SLHASIDALGSCYGDKQG+KYRAWVDRLFITQTGSDSWV RFDLW
Sbjct: 145 SLHASIDALGSCYGDKQGKKYRAWVDRLFITQTGSDSWVVRFDLW 279
Score = 111 bits (237), Expect = 2e-023
Identities = 43/45 (95%), Positives = 43/45 (95%)
Frame = +3 / -1
Query: 3 TSQTSPPNYLNQSV**KVCPPMLGTFSLVCHHNMIPTHQWMHGVR 137
TSQ SPPNYLNQSV**KVCPPMLGTFSLVCHHNMIP HQWMHGVR
Sbjct: 277 TSQISPPNYLNQSV**KVCPPMLGTFSLVCHHNMIPMHQWMHGVR 143
Score = 111 bits (236), Expect = 3e-023
Identities = 43/45 (95%), Positives = 45/45 (100%)
Frame = -2 / +3
Query: 136 LTPCIH*CVGIMLW*QTREKVPSMGGQTFYHTDWFR*LGGEV*LV 2
LTPCIH*C+GIMLW*QTREKVPSMGGQTFYHTDWFR*LGGE+*LV
Sbjct: 144 LTPCIH*CIGIMLW*QTREKVPSMGGQTFYHTDWFR*LGGEI*LV 278
Score = 110 bits (234), Expect = 5e-023
Identities = 41/45 (91%), Positives = 42/45 (93%)
Frame = -1 / +2
Query: 137 SHSMHPLMRWDHVMVTNKGESTEHGWTDFLSHRLVQIVGWGGLTC 3
SHSMHPLM WDHVMVTNKG+STEHGWTDFLSHRLVQIVGW LTC
Sbjct: 143 SHSMHPLMHWDHVMVTNKGKSTEHGWTDFLSHRLVQIVGW*DLTC 277
Score = 108 bits (231), Expect = 1e-022
Identities = 43/45 (95%), Positives = 43/45 (95%)
Frame = +2 / -3
Query: 2 HKSNLPTQLSEPVCVIKSLSTHARYFLPCLSP*HDPNASMDAWSE 136
HKSNL TQLSEPVCVIKSLSTHARYF PCLSP*HDPNASMDAWSE
Sbjct: 278 HKSNLTTQLSEPVCVIKSLSTHARYFFPCLSP*HDPNASMDAWSE 144
>gb|BG465298.1|BG465298 EM1_74_E07.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 630
Score = 111 bits (238), Expect = 2e-023
Identities = 43/45 (95%), Positives = 44/45 (97%)
Frame = -3 / +1
Query: 135 SLHASIDALGSCYGDKQGRKYRAWVDRLFITQTGSDSWVGRFDLW 1
SLHASIDALGSCYGDKQG+KYRAWVDRLFITQTGSDSWV RFDLW
Sbjct: 145 SLHASIDALGSCYGDKQGKKYRAWVDRLFITQTGSDSWVVRFDLW 279
Score = 111 bits (237), Expect = 2e-023
Identities = 43/45 (95%), Positives = 43/45 (95%)
Frame = +3 / -3
Query: 3 TSQTSPPNYLNQSV**KVCPPMLGTFSLVCHHNMIPTHQWMHGVR 137
TSQ SPPNYLNQSV**KVCPPMLGTFSLVCHHNMIP HQWMHGVR
Sbjct: 277 TSQISPPNYLNQSV**KVCPPMLGTFSLVCHHNMIPMHQWMHGVR 143
Score = 111 bits (236), Expect = 3e-023
Identities = 43/45 (95%), Positives = 45/45 (100%)
Frame = -2 / +3
Query: 136 LTPCIH*CVGIMLW*QTREKVPSMGGQTFYHTDWFR*LGGEV*LV 2
LTPCIH*C+GIMLW*QTREKVPSMGGQTFYHTDWFR*LGGE+*LV
Sbjct: 144 LTPCIH*CIGIMLW*QTREKVPSMGGQTFYHTDWFR*LGGEI*LV 278
Score = 110 bits (234), Expect = 5e-023
Identities = 41/45 (91%), Positives = 42/45 (93%)
Frame = -1 / +2
Query: 137 SHSMHPLMRWDHVMVTNKGESTEHGWTDFLSHRLVQIVGWGGLTC 3
SHSMHPLM WDHVMVTNKG+STEHGWTDFLSHRLVQIVGW LTC
Sbjct: 143 SHSMHPLMHWDHVMVTNKGKSTEHGWTDFLSHRLVQIVGW*DLTC 277
Score = 108 bits (231), Expect = 1e-022
Identities = 43/45 (95%), Positives = 43/45 (95%)
Frame = +2 / -2
Query: 2 HKSNLPTQLSEPVCVIKSLSTHARYFLPCLSP*HDPNASMDAWSE 136
HKSNL TQLSEPVCVIKSLSTHARYF PCLSP*HDPNASMDAWSE
Sbjct: 278 HKSNLTTQLSEPVCVIKSLSTHARYFFPCLSP*HDPNASMDAWSE 144
>gb|BI245500.1|BI245500 IP1_66_C03.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 503
Score = 111 bits (238), Expect = 2e-023
Identities = 43/45 (95%), Positives = 44/45 (97%)
Frame = -3 / +3
Query: 135 SLHASIDALGSCYGDKQGRKYRAWVDRLFITQTGSDSWVGRFDLW 1
SLHASIDALGSCYGDKQG+KYRAWVDRLFITQTGSDSWV RFDLW
Sbjct: 3 SLHASIDALGSCYGDKQGKKYRAWVDRLFITQTGSDSWVVRFDLW 137
Score = 111 bits (237), Expect = 2e-023
Identities = 43/45 (95%), Positives = 43/45 (95%)
Frame = +3 / -3
Query: 3 TSQTSPPNYLNQSV**KVCPPMLGTFSLVCHHNMIPTHQWMHGVR 137
TSQ SPPNYLNQSV**KVCPPMLGTFSLVCHHNMIP HQWMHGVR
Sbjct: 135 TSQISPPNYLNQSV**KVCPPMLGTFSLVCHHNMIPMHQWMHGVR 1
Score = 111 bits (236), Expect = 3e-023
Identities = 43/45 (95%), Positives = 45/45 (100%)
Frame = -2 / +2
Query: 136 LTPCIH*CVGIMLW*QTREKVPSMGGQTFYHTDWFR*LGGEV*LV 2
LTPCIH*C+GIMLW*QTREKVPSMGGQTFYHTDWFR*LGGE+*LV
Sbjct: 2 LTPCIH*CIGIMLW*QTREKVPSMGGQTFYHTDWFR*LGGEI*LV 136
Score = 110 bits (234), Expect = 5e-023
Identities = 41/45 (91%), Positives = 42/45 (93%)
Frame = -1 / +1
Query: 137 SHSMHPLMRWDHVMVTNKGESTEHGWTDFLSHRLVQIVGWGGLTC 3
SHSMHPLM WDHVMVTNKG+STEHGWTDFLSHRLVQIVGW LTC
Sbjct: 1 SHSMHPLMHWDHVMVTNKGKSTEHGWTDFLSHRLVQIVGW*DLTC 135
Score = 108 bits (231), Expect = 1e-022
Identities = 43/45 (95%), Positives = 43/45 (95%)
Frame = +2 / -2
Query: 2 HKSNLPTQLSEPVCVIKSLSTHARYFLPCLSP*HDPNASMDAWSE 136
HKSNL TQLSEPVCVIKSLSTHARYF PCLSP*HDPNASMDAWSE
Sbjct: 136 HKSNLTTQLSEPVCVIKSLSTHARYFFPCLSP*HDPNASMDAWSE 2
>gb|BE364812.2|BE364812 PI1_16_E11.g1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 527
Score = 111 bits (238), Expect = 2e-023
Identities = 43/45 (95%), Positives = 44/45 (97%)
Frame = -3 / +3
Query: 135 SLHASIDALGSCYGDKQGRKYRAWVDRLFITQTGSDSWVGRFDLW 1
SLHASIDALGSCYGDKQG+KYRAWVDRLFITQTGSDSWV RFDLW
Sbjct: 51 SLHASIDALGSCYGDKQGKKYRAWVDRLFITQTGSDSWVVRFDLW 185
Score = 111 bits (237), Expect = 2e-023
Identities = 43/45 (95%), Positives = 43/45 (95%)
Frame = +3 / -3
Query: 3 TSQTSPPNYLNQSV**KVCPPMLGTFSLVCHHNMIPTHQWMHGVR 137
TSQ SPPNYLNQSV**KVCPPMLGTFSLVCHHNMIP HQWMHGVR
Sbjct: 183 TSQISPPNYLNQSV**KVCPPMLGTFSLVCHHNMIPMHQWMHGVR 49
Score = 111 bits (236), Expect = 3e-023
Identities = 43/45 (95%), Positives = 45/45 (100%)
Frame = -2 / +2
Query: 136 LTPCIH*CVGIMLW*QTREKVPSMGGQTFYHTDWFR*LGGEV*LV 2
LTPCIH*C+GIMLW*QTREKVPSMGGQTFYHTDWFR*LGGE+*LV
Sbjct: 50 LTPCIH*CIGIMLW*QTREKVPSMGGQTFYHTDWFR*LGGEI*LV 184
Score = 110 bits (234), Expect = 5e-023
Identities = 41/45 (91%), Positives = 42/45 (93%)
Frame = -1 / +1
Query: 137 SHSMHPLMRWDHVMVTNKGESTEHGWTDFLSHRLVQIVGWGGLTC 3
SHSMHPLM WDHVMVTNKG+STEHGWTDFLSHRLVQIVGW LTC
Sbjct: 49 SHSMHPLMHWDHVMVTNKGKSTEHGWTDFLSHRLVQIVGW*DLTC 183
Score = 108 bits (231), Expect = 1e-022
Identities = 43/45 (95%), Positives = 43/45 (95%)
Frame = +2 / -2
Query: 2 HKSNLPTQLSEPVCVIKSLSTHARYFLPCLSP*HDPNASMDAWSE 136
HKSNL TQLSEPVCVIKSLSTHARYF PCLSP*HDPNASMDAWSE
Sbjct: 184 HKSNLTTQLSEPVCVIKSLSTHARYFFPCLSP*HDPNASMDAWSE 50
>gb|BM318696.1|BM318696 PI1_16_E11.b9_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 556
Score = 111 bits (238), Expect = 2e-023
Identities = 43/45 (95%), Positives = 44/45 (97%)
Frame = -3 / +3
Query: 135 SLHASIDALGSCYGDKQGRKYRAWVDRLFITQTGSDSWVGRFDLW 1
SLHASIDALGSCYGDKQG+KYRAWVDRLFITQTGSDSWV RFDLW
Sbjct: 51 SLHASIDALGSCYGDKQGKKYRAWVDRLFITQTGSDSWVVRFDLW 185
Score = 111 bits (237), Expect = 2e-023
Identities = 43/45 (95%), Positives = 43/45 (95%)
Frame = +3 / -2
Query: 3 TSQTSPPNYLNQSV**KVCPPMLGTFSLVCHHNMIPTHQWMHGVR 137
TSQ SPPNYLNQSV**KVCPPMLGTFSLVCHHNMIP HQWMHGVR
Sbjct: 183 TSQISPPNYLNQSV**KVCPPMLGTFSLVCHHNMIPMHQWMHGVR 49
Score = 111 bits (236), Expect = 3e-023
Identities = 43/45 (95%), Positives = 45/45 (100%)
Frame = -2 / +2
Query: 136 LTPCIH*CVGIMLW*QTREKVPSMGGQTFYHTDWFR*LGGEV*LV 2
LTPCIH*C+GIMLW*QTREKVPSMGGQTFYHTDWFR*LGGE+*LV
Sbjct: 50 LTPCIH*CIGIMLW*QTREKVPSMGGQTFYHTDWFR*LGGEI*LV 184
Score = 110 bits (234), Expect = 5e-023
Identities = 41/45 (91%), Positives = 42/45 (93%)
Frame = -1 / +1
Query: 137 SHSMHPLMRWDHVMVTNKGESTEHGWTDFLSHRLVQIVGWGGLTC 3
SHSMHPLM WDHVMVTNKG+STEHGWTDFLSHRLVQIVGW LTC
Sbjct: 49 SHSMHPLMHWDHVMVTNKGKSTEHGWTDFLSHRLVQIVGW*DLTC 183
Score = 108 bits (231), Expect = 1e-022
Identities = 43/45 (95%), Positives = 43/45 (95%)
Frame = +2 / -1
Query: 2 HKSNLPTQLSEPVCVIKSLSTHARYFLPCLSP*HDPNASMDAWSE 136
HKSNL TQLSEPVCVIKSLSTHARYF PCLSP*HDPNASMDAWSE
Sbjct: 184 HKSNLTTQLSEPVCVIKSLSTHARYFFPCLSP*HDPNASMDAWSE 50
>gb|BM329403.1|BM329403 PIC1_37_E01.g1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 561
Score = 111 bits (238), Expect = 2e-023
Identities = 43/45 (95%), Positives = 44/45 (97%)
Frame = -3 / +1
Query: 135 SLHASIDALGSCYGDKQGRKYRAWVDRLFITQTGSDSWVGRFDLW 1
SLHASIDALGSCYGDKQG+KYRAWVDRLFITQTGSDSWV RFDLW
Sbjct: 61 SLHASIDALGSCYGDKQGKKYRAWVDRLFITQTGSDSWVVRFDLW 195
Score = 111 bits (237), Expect = 2e-023
Identities = 43/45 (95%), Positives = 43/45 (95%)
Frame = +3 / -3
Query: 3 TSQTSPPNYLNQSV**KVCPPMLGTFSLVCHHNMIPTHQWMHGVR 137
TSQ SPPNYLNQSV**KVCPPMLGTFSLVCHHNMIP HQWMHGVR
Sbjct: 193 TSQISPPNYLNQSV**KVCPPMLGTFSLVCHHNMIPMHQWMHGVR 59
Score = 111 bits (236), Expect = 3e-023
Identities = 43/45 (95%), Positives = 45/45 (100%)
Frame = -2 / +3
Query: 136 LTPCIH*CVGIMLW*QTREKVPSMGGQTFYHTDWFR*LGGEV*LV 2
LTPCIH*C+GIMLW*QTREKVPSMGGQTFYHTDWFR*LGGE+*LV
Sbjct: 60 LTPCIH*CIGIMLW*QTREKVPSMGGQTFYHTDWFR*LGGEI*LV 194
Score = 110 bits (234), Expect = 5e-023
Identities = 41/45 (91%), Positives = 42/45 (93%)
Frame = -1 / +2
Query: 137 SHSMHPLMRWDHVMVTNKGESTEHGWTDFLSHRLVQIVGWGGLTC 3
SHSMHPLM WDHVMVTNKG+STEHGWTDFLSHRLVQIVGW LTC
Sbjct: 59 SHSMHPLMHWDHVMVTNKGKSTEHGWTDFLSHRLVQIVGW*DLTC 193
Score = 108 bits (231), Expect = 1e-022
Identities = 43/45 (95%), Positives = 43/45 (95%)
Frame = +2 / -2
Query: 2 HKSNLPTQLSEPVCVIKSLSTHARYFLPCLSP*HDPNASMDAWSE 136
HKSNL TQLSEPVCVIKSLSTHARYF PCLSP*HDPNASMDAWSE
Sbjct: 194 HKSNLTTQLSEPVCVIKSLSTHARYFFPCLSP*HDPNASMDAWSE 60
>gb|CD204940.1|CD204940 HS1_11_D02.b1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_11_D02_A012 3', mRNA sequence
Length = 624
Score = 111 bits (238), Expect = 2e-023
Identities = 43/45 (95%), Positives = 44/45 (97%)
Frame = -3 / +3
Query: 135 SLHASIDALGSCYGDKQGRKYRAWVDRLFITQTGSDSWVGRFDLW 1
SLHASIDALGSCYGDKQG+KYRAWVDRLFITQTGSDSWV RFDLW
Sbjct: 111 SLHASIDALGSCYGDKQGKKYRAWVDRLFITQTGSDSWVVRFDLW 245
Score = 111 bits (237), Expect = 2e-023
Identities = 43/45 (95%), Positives = 43/45 (95%)
Frame = +3 / -1
Query: 3 TSQTSPPNYLNQSV**KVCPPMLGTFSLVCHHNMIPTHQWMHGVR 137
TSQ SPPNYLNQSV**KVCPPMLGTFSLVCHHNMIP HQWMHGVR
Sbjct: 243 TSQISPPNYLNQSV**KVCPPMLGTFSLVCHHNMIPMHQWMHGVR 109
Score = 111 bits (236), Expect = 3e-023
Identities = 43/45 (95%), Positives = 45/45 (100%)
Frame = -2 / +2
Query: 136 LTPCIH*CVGIMLW*QTREKVPSMGGQTFYHTDWFR*LGGEV*LV 2
LTPCIH*C+GIMLW*QTREKVPSMGGQTFYHTDWFR*LGGE+*LV
Sbjct: 110 LTPCIH*CIGIMLW*QTREKVPSMGGQTFYHTDWFR*LGGEI*LV 244
Score = 110 bits (234), Expect = 5e-023
Identities = 41/45 (91%), Positives = 42/45 (93%)
Frame = -1 / +1
Query: 137 SHSMHPLMRWDHVMVTNKGESTEHGWTDFLSHRLVQIVGWGGLTC 3
SHSMHPLM WDHVMVTNKG+STEHGWTDFLSHRLVQIVGW LTC
Sbjct: 109 SHSMHPLMHWDHVMVTNKGKSTEHGWTDFLSHRLVQIVGW*DLTC 243
Score = 108 bits (231), Expect = 1e-022
Identities = 43/45 (95%), Positives = 43/45 (95%)
Frame = +2 / -3
Query: 2 HKSNLPTQLSEPVCVIKSLSTHARYFLPCLSP*HDPNASMDAWSE 136
HKSNL TQLSEPVCVIKSLSTHARYF PCLSP*HDPNASMDAWSE
Sbjct: 244 HKSNLTTQLSEPVCVIKSLSTHARYFFPCLSP*HDPNASMDAWSE 110
>gb|CN127152.1|CN127152 RHOH1_21_G12.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_21_G12_A002 3', mRNA sequence
Length = 823
Score = 111 bits (238), Expect = 2e-023
Identities = 43/45 (95%), Positives = 44/45 (97%)
Frame = -3 / +1
Query: 135 SLHASIDALGSCYGDKQGRKYRAWVDRLFITQTGSDSWVGRFDLW 1
SLHASIDALGSCYGDKQG+KYRAWVDRLFITQTGSDSWV RFDLW
Sbjct: 328 SLHASIDALGSCYGDKQGKKYRAWVDRLFITQTGSDSWVVRFDLW 462
Score = 111 bits (237), Expect = 2e-023
Identities = 43/45 (95%), Positives = 43/45 (95%)
Frame = +3 / -1
Query: 3 TSQTSPPNYLNQSV**KVCPPMLGTFSLVCHHNMIPTHQWMHGVR 137
TSQ SPPNYLNQSV**KVCPPMLGTFSLVCHHNMIP HQWMHGVR
Sbjct: 460 TSQISPPNYLNQSV**KVCPPMLGTFSLVCHHNMIPMHQWMHGVR 326
Score = 111 bits (236), Expect = 3e-023
Identities = 43/45 (95%), Positives = 45/45 (100%)
Frame = -2 / +3
Query: 136 LTPCIH*CVGIMLW*QTREKVPSMGGQTFYHTDWFR*LGGEV*LV 2
LTPCIH*C+GIMLW*QTREKVPSMGGQTFYHTDWFR*LGGE+*LV
Sbjct: 327 LTPCIH*CIGIMLW*QTREKVPSMGGQTFYHTDWFR*LGGEI*LV 461
Score = 110 bits (234), Expect = 5e-023
Identities = 41/45 (91%), Positives = 42/45 (93%)
Frame = -1 / +2
Query: 137 SHSMHPLMRWDHVMVTNKGESTEHGWTDFLSHRLVQIVGWGGLTC 3
SHSMHPLM WDHVMVTNKG+STEHGWTDFLSHRLVQIVGW LTC
Sbjct: 326 SHSMHPLMHWDHVMVTNKGKSTEHGWTDFLSHRLVQIVGW*DLTC 460
Score = 108 bits (231), Expect = 1e-022
Identities = 43/45 (95%), Positives = 43/45 (95%)
Frame = +2 / -3
Query: 2 HKSNLPTQLSEPVCVIKSLSTHARYFLPCLSP*HDPNASMDAWSE 136
HKSNL TQLSEPVCVIKSLSTHARYF PCLSP*HDPNASMDAWSE
Sbjct: 461 HKSNLTTQLSEPVCVIKSLSTHARYFFPCLSP*HDPNASMDAWSE 327
>gb|CN148130.1|CN148130 WOUND1_54_H01.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_54_H01_A002 3', mRNA sequence
Length = 766
Score = 111 bits (238), Expect = 2e-023
Identities = 43/45 (95%), Positives = 44/45 (97%)
Frame = -3 / +1
Query: 135 SLHASIDALGSCYGDKQGRKYRAWVDRLFITQTGSDSWVGRFDLW 1
SLHASIDALGSCYGDKQG+KYRAWVDRLFITQTGSDSWV RFDLW
Sbjct: 271 SLHASIDALGSCYGDKQGKKYRAWVDRLFITQTGSDSWVVRFDLW 405
Score = 111 bits (237), Expect = 2e-023
Identities = 43/45 (95%), Positives = 43/45 (95%)
Frame = +3 / -1
Query: 3 TSQTSPPNYLNQSV**KVCPPMLGTFSLVCHHNMIPTHQWMHGVR 137
TSQ SPPNYLNQSV**KVCPPMLGTFSLVCHHNMIP HQWMHGVR
Sbjct: 403 TSQISPPNYLNQSV**KVCPPMLGTFSLVCHHNMIPMHQWMHGVR 269
Score = 111 bits (236), Expect = 3e-023
Identities = 43/45 (95%), Positives = 45/45 (100%)
Frame = -2 / +3
Query: 136 LTPCIH*CVGIMLW*QTREKVPSMGGQTFYHTDWFR*LGGEV*LV 2
LTPCIH*C+GIMLW*QTREKVPSMGGQTFYHTDWFR*LGGE+*LV
Sbjct: 270 LTPCIH*CIGIMLW*QTREKVPSMGGQTFYHTDWFR*LGGEI*LV 404
Score = 110 bits (234), Expect = 5e-023
Identities = 41/45 (91%), Positives = 42/45 (93%)
Frame = -1 / +2
Query: 137 SHSMHPLMRWDHVMVTNKGESTEHGWTDFLSHRLVQIVGWGGLTC 3
SHSMHPLM WDHVMVTNKG+STEHGWTDFLSHRLVQIVGW LTC
Sbjct: 269 SHSMHPLMHWDHVMVTNKGKSTEHGWTDFLSHRLVQIVGW*DLTC 403
Score = 108 bits (231), Expect = 1e-022
Identities = 43/45 (95%), Positives = 43/45 (95%)
Frame = +2 / -3
Query: 2 HKSNLPTQLSEPVCVIKSLSTHARYFLPCLSP*HDPNASMDAWSE 136
HKSNL TQLSEPVCVIKSLSTHARYF PCLSP*HDPNASMDAWSE
Sbjct: 404 HKSNLTTQLSEPVCVIKSLSTHARYFFPCLSP*HDPNASMDAWSE 270
>gb|CN152450.1|CN152450 WOUND1_82_D06.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_82_D06_A002 3', mRNA sequence
Length = 788
Score = 111 bits (238), Expect = 2e-023
Identities = 43/45 (95%), Positives = 44/45 (97%)
Frame = -3 / +2
Query: 135 SLHASIDALGSCYGDKQGRKYRAWVDRLFITQTGSDSWVGRFDLW 1
SLHASIDALGSCYGDKQG+KYRAWVDRLFITQTGSDSWV RFDLW
Sbjct: 293 SLHASIDALGSCYGDKQGKKYRAWVDRLFITQTGSDSWVVRFDLW 427
Score = 111 bits (237), Expect = 2e-023
Identities = 43/45 (95%), Positives = 43/45 (95%)
Frame = +3 / -1
Query: 3 TSQTSPPNYLNQSV**KVCPPMLGTFSLVCHHNMIPTHQWMHGVR 137
TSQ SPPNYLNQSV**KVCPPMLGTFSLVCHHNMIP HQWMHGVR
Sbjct: 425 TSQISPPNYLNQSV**KVCPPMLGTFSLVCHHNMIPMHQWMHGVR 291
Score = 111 bits (236), Expect = 3e-023
Identities = 43/45 (95%), Positives = 45/45 (100%)
Frame = -2 / +1
Query: 136 LTPCIH*CVGIMLW*QTREKVPSMGGQTFYHTDWFR*LGGEV*LV 2
LTPCIH*C+GIMLW*QTREKVPSMGGQTFYHTDWFR*LGGE+*LV
Sbjct: 292 LTPCIH*CIGIMLW*QTREKVPSMGGQTFYHTDWFR*LGGEI*LV 426
Score = 110 bits (234), Expect = 5e-023
Identities = 41/45 (91%), Positives = 42/45 (93%)
Frame = -1 / +3
Query: 137 SHSMHPLMRWDHVMVTNKGESTEHGWTDFLSHRLVQIVGWGGLTC 3
SHSMHPLM WDHVMVTNKG+STEHGWTDFLSHRLVQIVGW LTC
Sbjct: 291 SHSMHPLMHWDHVMVTNKGKSTEHGWTDFLSHRLVQIVGW*DLTC 425
Score = 108 bits (231), Expect = 1e-022
Identities = 43/45 (95%), Positives = 43/45 (95%)
Frame = +2 / -3
Query: 2 HKSNLPTQLSEPVCVIKSLSTHARYFLPCLSP*HDPNASMDAWSE 136
HKSNL TQLSEPVCVIKSLSTHARYF PCLSP*HDPNASMDAWSE
Sbjct: 426 HKSNLTTQLSEPVCVIKSLSTHARYFFPCLSP*HDPNASMDAWSE 292
>gb|CX609487.1|CX609487 ANR1_13_B05.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_13_B05_A002 3', mRNA sequence
Length = 857
Score = 111 bits (238), Expect = 2e-023
Identities = 43/45 (95%), Positives = 44/45 (97%)
Frame = -3 / +1
Query: 135 SLHASIDALGSCYGDKQGRKYRAWVDRLFITQTGSDSWVGRFDLW 1
SLHASIDALGSCYGDKQG+KYRAWVDRLFITQTGSDSWV RFDLW
Sbjct: 337 SLHASIDALGSCYGDKQGKKYRAWVDRLFITQTGSDSWVVRFDLW 471
Score = 111 bits (237), Expect = 2e-023
Identities = 43/45 (95%), Positives = 43/45 (95%)
Frame = +3 / -2
Query: 3 TSQTSPPNYLNQSV**KVCPPMLGTFSLVCHHNMIPTHQWMHGVR 137
TSQ SPPNYLNQSV**KVCPPMLGTFSLVCHHNMIP HQWMHGVR
Sbjct: 469 TSQISPPNYLNQSV**KVCPPMLGTFSLVCHHNMIPMHQWMHGVR 335
Score = 111 bits (236), Expect = 3e-023
Identities = 43/45 (95%), Positives = 45/45 (100%)
Frame = -2 / +3
Query: 136 LTPCIH*CVGIMLW*QTREKVPSMGGQTFYHTDWFR*LGGEV*LV 2
LTPCIH*C+GIMLW*QTREKVPSMGGQTFYHTDWFR*LGGE+*LV
Sbjct: 336 LTPCIH*CIGIMLW*QTREKVPSMGGQTFYHTDWFR*LGGEI*LV 470
Score = 110 bits (234), Expect = 5e-023
Identities = 41/45 (91%), Positives = 42/45 (93%)
Frame = -1 / +2
Query: 137 SHSMHPLMRWDHVMVTNKGESTEHGWTDFLSHRLVQIVGWGGLTC 3
SHSMHPLM WDHVMVTNKG+STEHGWTDFLSHRLVQIVGW LTC
Sbjct: 335 SHSMHPLMHWDHVMVTNKGKSTEHGWTDFLSHRLVQIVGW*DLTC 469
Score = 108 bits (231), Expect = 1e-022
Identities = 43/45 (95%), Positives = 43/45 (95%)
Frame = +2 / -1
Query: 2 HKSNLPTQLSEPVCVIKSLSTHARYFLPCLSP*HDPNASMDAWSE 136
HKSNL TQLSEPVCVIKSLSTHARYF PCLSP*HDPNASMDAWSE
Sbjct: 470 HKSNLTTQLSEPVCVIKSLSTHARYFFPCLSP*HDPNASMDAWSE 336
>gb|CX611720.1|CX611720 ANR1_26_G07.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_26_G07_A002 3', mRNA sequence
Length = 812
Score = 111 bits (238), Expect = 2e-023
Identities = 43/45 (95%), Positives = 44/45 (97%)
Frame = -3 / +2
Query: 135 SLHASIDALGSCYGDKQGRKYRAWVDRLFITQTGSDSWVGRFDLW 1
SLHASIDALGSCYGDKQG+KYRAWVDRLFITQTGSDSWV RFDLW
Sbjct: 269 SLHASIDALGSCYGDKQGKKYRAWVDRLFITQTGSDSWVVRFDLW 403
Score = 111 bits (237), Expect = 2e-023
Identities = 43/45 (95%), Positives = 43/45 (95%)
Frame = +3 / -1
Query: 3 TSQTSPPNYLNQSV**KVCPPMLGTFSLVCHHNMIPTHQWMHGVR 137
TSQ SPPNYLNQSV**KVCPPMLGTFSLVCHHNMIP HQWMHGVR
Sbjct: 401 TSQISPPNYLNQSV**KVCPPMLGTFSLVCHHNMIPMHQWMHGVR 267
Score = 111 bits (236), Expect = 3e-023
Identities = 43/45 (95%), Positives = 45/45 (100%)
Frame = -2 / +1
Query: 136 LTPCIH*CVGIMLW*QTREKVPSMGGQTFYHTDWFR*LGGEV*LV 2
LTPCIH*C+GIMLW*QTREKVPSMGGQTFYHTDWFR*LGGE+*LV
Sbjct: 268 LTPCIH*CIGIMLW*QTREKVPSMGGQTFYHTDWFR*LGGEI*LV 402
Score = 110 bits (234), Expect = 5e-023
Identities = 41/45 (91%), Positives = 42/45 (93%)
Frame = -1 / +3
Query: 137 SHSMHPLMRWDHVMVTNKGESTEHGWTDFLSHRLVQIVGWGGLTC 3
SHSMHPLM WDHVMVTNKG+STEHGWTDFLSHRLVQIVGW LTC
Sbjct: 267 SHSMHPLMHWDHVMVTNKGKSTEHGWTDFLSHRLVQIVGW*DLTC 401
Score = 108 bits (231), Expect = 1e-022
Identities = 43/45 (95%), Positives = 43/45 (95%)
Frame = +2 / -3
Query: 2 HKSNLPTQLSEPVCVIKSLSTHARYFLPCLSP*HDPNASMDAWSE 136
HKSNL TQLSEPVCVIKSLSTHARYF PCLSP*HDPNASMDAWSE
Sbjct: 402 HKSNLTTQLSEPVCVIKSLSTHARYFFPCLSP*HDPNASMDAWSE 268
>gb|CX613756.1|CX613756 GABR1_10_B09.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_10_B09_A002 3', mRNA sequence
Length = 444
Score = 111 bits (238), Expect = 2e-023
Identities = 43/45 (95%), Positives = 44/45 (97%)
Frame = -3 / +3
Query: 135 SLHASIDALGSCYGDKQGRKYRAWVDRLFITQTGSDSWVGRFDLW 1
SLHASIDALGSCYGDKQG+KYRAWVDRLFITQTGSDSWV RFDLW
Sbjct: 6 SLHASIDALGSCYGDKQGKKYRAWVDRLFITQTGSDSWVVRFDLW 140
Score = 111 bits (237), Expect = 2e-023
Identities = 43/45 (95%), Positives = 43/45 (95%)
Frame = +3 / -1
Query: 3 TSQTSPPNYLNQSV**KVCPPMLGTFSLVCHHNMIPTHQWMHGVR 137
TSQ SPPNYLNQSV**KVCPPMLGTFSLVCHHNMIP HQWMHGVR
Sbjct: 138 TSQISPPNYLNQSV**KVCPPMLGTFSLVCHHNMIPMHQWMHGVR 4
Score = 111 bits (236), Expect = 3e-023
Identities = 43/45 (95%), Positives = 45/45 (100%)
Frame = -2 / +2
Query: 136 LTPCIH*CVGIMLW*QTREKVPSMGGQTFYHTDWFR*LGGEV*LV 2
LTPCIH*C+GIMLW*QTREKVPSMGGQTFYHTDWFR*LGGE+*LV
Sbjct: 5 LTPCIH*CIGIMLW*QTREKVPSMGGQTFYHTDWFR*LGGEI*LV 139
Score = 110 bits (234), Expect = 5e-023
Identities = 41/45 (91%), Positives = 42/45 (93%)
Frame = -1 / +1
Query: 137 SHSMHPLMRWDHVMVTNKGESTEHGWTDFLSHRLVQIVGWGGLTC 3
SHSMHPLM WDHVMVTNKG+STEHGWTDFLSHRLVQIVGW LTC
Sbjct: 4 SHSMHPLMHWDHVMVTNKGKSTEHGWTDFLSHRLVQIVGW*DLTC 138
Score = 108 bits (231), Expect = 1e-022
Identities = 43/45 (95%), Positives = 43/45 (95%)
Frame = +2 / -3
Query: 2 HKSNLPTQLSEPVCVIKSLSTHARYFLPCLSP*HDPNASMDAWSE 136
HKSNL TQLSEPVCVIKSLSTHARYF PCLSP*HDPNASMDAWSE
Sbjct: 139 HKSNLTTQLSEPVCVIKSLSTHARYFFPCLSP*HDPNASMDAWSE 5
>gb|CX613776.1|CX613776 GABR1_10_D06.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_10_D06_A002 3', mRNA sequence
Length = 712
Score = 111 bits (238), Expect = 2e-023
Identities = 43/45 (95%), Positives = 44/45 (97%)
Frame = -3 / +3
Query: 135 SLHASIDALGSCYGDKQGRKYRAWVDRLFITQTGSDSWVGRFDLW 1
SLHASIDALGSCYGDKQG+KYRAWVDRLFITQTGSDSWV RFDLW
Sbjct: 213 SLHASIDALGSCYGDKQGKKYRAWVDRLFITQTGSDSWVVRFDLW 347
Score = 111 bits (237), Expect = 2e-023
Identities = 43/45 (95%), Positives = 43/45 (95%)
Frame = +3 / -2
Query: 3 TSQTSPPNYLNQSV**KVCPPMLGTFSLVCHHNMIPTHQWMHGVR 137
TSQ SPPNYLNQSV**KVCPPMLGTFSLVCHHNMIP HQWMHGVR
Sbjct: 345 TSQISPPNYLNQSV**KVCPPMLGTFSLVCHHNMIPMHQWMHGVR 211
Score = 111 bits (236), Expect = 3e-023
Identities = 43/45 (95%), Positives = 45/45 (100%)
Frame = -2 / +2
Query: 136 LTPCIH*CVGIMLW*QTREKVPSMGGQTFYHTDWFR*LGGEV*LV 2
LTPCIH*C+GIMLW*QTREKVPSMGGQTFYHTDWFR*LGGE+*LV
Sbjct: 212 LTPCIH*CIGIMLW*QTREKVPSMGGQTFYHTDWFR*LGGEI*LV 346
Score = 110 bits (234), Expect = 5e-023
Identities = 41/45 (91%), Positives = 42/45 (93%)
Frame = -1 / +1
Query: 137 SHSMHPLMRWDHVMVTNKGESTEHGWTDFLSHRLVQIVGWGGLTC 3
SHSMHPLM WDHVMVTNKG+STEHGWTDFLSHRLVQIVGW LTC
Sbjct: 211 SHSMHPLMHWDHVMVTNKGKSTEHGWTDFLSHRLVQIVGW*DLTC 345
Score = 108 bits (231), Expect = 1e-022
Identities = 43/45 (95%), Positives = 43/45 (95%)
Frame = +2 / -1
Query: 2 HKSNLPTQLSEPVCVIKSLSTHARYFLPCLSP*HDPNASMDAWSE 136
HKSNL TQLSEPVCVIKSLSTHARYF PCLSP*HDPNASMDAWSE
Sbjct: 346 HKSNLTTQLSEPVCVIKSLSTHARYFFPCLSP*HDPNASMDAWSE 212
>gb|BG241283.1|BG241283 OV1_40_D10.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 526
Score = 104 bits (222), Expect = 2e-021
Identities = 39/51 (76%), Positives = 43/51 (84%)
Frame = -3 / +1
Query: 540 KEVTKREYTQYSEYKNWVWKSQDDLFLNGAFFNQSGGQNERKYDRLDLIQA 388
KEVTKREYT Y +YK WVWKSQ D+ +NGAFFN+SGGQNERKYD LD I A
Sbjct: 373 KEVTKREYTAYKDYKEWVWKSQGDVMMNGAFFNESGGQNERKYDELDFIPA 525
>gb|BG241293.1|BG241293 OV1_40_E09.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 526
Score = 104 bits (222), Expect = 2e-021
Identities = 39/51 (76%), Positives = 43/51 (84%)
Frame = -3 / +1
Query: 540 KEVTKREYTQYSEYKNWVWKSQDDLFLNGAFFNQSGGQNERKYDRLDLIQA 388
KEVTKREYT Y +YK WVWKSQ D+ +NGAFFN+SGGQNERKYD LD I A
Sbjct: 373 KEVTKREYTAYKDYKEWVWKSQGDVMMNGAFFNESGGQNERKYDELDFIPA 525
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,082,178,960
Number of Sequences: 832831
Number of extensions: 16150148
Number of successful extensions: 176992
Number of sequences better than 1.0e-020: 45
length of database: 163,786,556
effective HSP length: 55
effective length of database: 117,980,851
effective search space used: 38107814873
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)