TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2437629.2.2
(1041 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BM328755.1|BM328755 PIC1_26_B07.g1_A002 Pathogen-infecte... 117 6e-065
gb|BG465944.1|BG465944 RHIZ2_46_E09.g1_A003 Rhizome2 (RHIZ2... 101 2e-062
gb|CN139974.1|CN139974 OX1_33_F07.b1_A002 Oxidatively-stres... 144 3e-062
gb|BG159361.1|BG159361 OV2_6_G12.g1_A002 Ovary 2 (OV2) Sorg... 149 9e-061
gb|CD228545.1|CD228545 CCC1_8_A06.b1_A007 Callus culture/ce... 98 3e-060
gb|CW438004.1|CW438004 fsbb001f155g11f0 Sorghum methylation... 115 5e-059
gb|CW070747.1|CW070747 104_322_10590981_116_30543 Sorghum m... 119 1e-042
gb|CW161271.1|CW161271 104_568_11150325_148_36430_093 Sorgh... 59 5e-041
gb|BG101804.1|BG101804 RHIZ2_22_F05.g1_A003 Rhizome2 (RHIZ2... 102 2e-034
gb|CF488456.1|CF488456 POL1_50_C12.b1_A002 Pollen Sorghum b... 121 5e-031
gb|CN145002.1|CN145002 WOUND1_26_E07.b2_A002 Wounded leaves... 121 7e-031
gb|CX608003.1|CX608003 ANR1_32_C02.b1_A002 Anaerobic roots ... 119 1e-030
gb|CD227672.1|CD227672 CCC1_53_D08.b1_A007 Callus culture/c... 116 8e-025
gb|CX612583.1|CX612583 GABR1_3_F09.b1_A002 GA- or brassinol... 116 8e-025
gb|BG159352.1|BG159352 OV2_6_F12.g1_A002 Ovary 2 (OV2) Sorg... 85 3e-023
>gb|BM328755.1|BM328755 PIC1_26_B07.g1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 574
Score = 117 bits (250), Expect(5) = 6e-065
Identities = 49/56 (87%), Positives = 51/56 (91%)
Frame = +1 / +2
Query: 43 GFITSTVVLQTDKGDEELCSVYVPTNHLYIGDIFLVNSXXXXRPNLSIREGIGMVV 210
GFITSTVVLQTDKGDEELCSVYVPTNHLYIGDIFLVNS RPNLSIREGI ++V
Sbjct: 2 GFITSTVVLQTDKGDEELCSVYVPTNHLYIGDIFLVNSEEIIRPNLSIREGIEIIV 169
Score = 111 bits (238), Expect(6) = 4e-063
Identities = 48/57 (84%), Positives = 51/57 (89%)
Frame = -2 / -2
Query: 212 QTTIPIPSRIDKLGLXXXXEFTRNISPMYR*FVGTYTLHSSSSPLSV*RTTVDVMNP 42
+T I IPSR+DKLGL EFTRN+SPMYR*FVGTYTLHSSSSPLSV*RTTVDVMNP
Sbjct: 171 ETIISIPSRMDKLGLIISSEFTRNMSPMYR*FVGTYTLHSSSSPLSV*RTTVDVMNP 1
Score = 104 bits (221), Expect(5) = 3e-055
Identities = 42/56 (75%), Positives = 46/56 (82%)
Frame = -1 / -1
Query: 210 NYHTDSFSNR*IRSXXXXXVHQKYITDVQMICWHIHTTQFFVAFVSLKDHR*CYES 43
N + +SF N *IRS VHQKY+TDV MICWHIHTTQFF+AFVSLKDHR*CYES
Sbjct: 169 NNYFNSFPNG*IRSYNLLRVHQKYVTDV*MICWHIHTTQFFIAFVSLKDHR*CYES 2
Score = 99.1 bits (210), Expect(6) = 3e-055
Identities = 42/51 (82%), Positives = 42/51 (82%)
Frame = +2 / +3
Query: 44 DS*HQRWSFRLTKATKNCVVCMCQQIICTSVIYFW*TXXXX*DLIYLFEKE 196
DS*HQRWSFRLTKA KNCVVCMCQQII TSV YFW*T *DLIY F KE
Sbjct: 3 DS*HQRWSFRLTKAMKNCVVCMCQQIIYTSVTYFW*TLRRL*DLIYPFGKE 155
Score = 96.8 bits (205), Expect(4) = 9e-028
Identities = 44/58 (75%), Positives = 46/58 (79%)
Frame = -3 / -3
Query: 217 LTKLPYRFLLE*IN*VLXXXXSSPEIYHRCTDDLLAHTHYTVLRRLCQSEGPPLML*I 44
L K ++FL E IN*VL SSPEI HRC DDLLAHTHYTVL RLCQSEGPPLML*I
Sbjct: 176 LLKQLFQFLPEWIN*VL*SPQSSPEICHRCIDDLLAHTHYTVLHRLCQSEGPPLML*I 3
Score = 85.4 bits (180), Expect(6) = 4e-063
Identities = 35/41 (85%), Positives = 38/41 (92%)
Frame = -3 / -2
Query: 505 VLHHVILFRRMFWLFRGMGSSDAIT*GMVIPPETIISAETK 383
VLHHVILFRRM WLFRG+GSSDAIT*GMVIPPETIIS ++
Sbjct: 267 VLHHVILFRRMLWLFRGIGSSDAIT*GMVIPPETIISIPSR 145
Score = 84.5 bits (178), Expect(5) = 6e-065
Identities = 33/37 (89%), Positives = 36/37 (97%)
Frame = +2 / +1
Query: 398 NNCFRRDDHASGDCITGAHATEKPEHSSK*NDVM*NK 508
NNCFRR+DHASGDCITGA+A EKPEHSSK*NDVM*+K
Sbjct: 160 NNCFRRNDHASGDCITGAYAAEKPEHSSK*NDVM*HK 270
Score = 82.2 bits (173), Expect(6) = 3e-055
Identities = 35/37 (94%), Positives = 36/37 (97%)
Frame = +3 / +2
Query: 396 EIIVSGGMTMPQVIASLEPMPRKSQNIRLNRMT*CKT 506
EIIVSGGMTMPQVIASLEPMPRKSQ+IRLNRMT*C T
Sbjct: 158 EIIVSGGMTMPQVIASLEPMPRKSQSIRLNRMT*CNT 268
Score = 79.4 bits (167), Expect(5) = 3e-055
Identities = 32/37 (86%), Positives = 32/37 (86%)
Frame = -2 / -1
Query: 506 CFTSRHSI*TNVLAFPWHGLQ*CNHLRHGHPS*NNYF 396
C TSRHSI*TN LAFP H LQ*CNHLRHGH S*NNYF
Sbjct: 268 CVTSRHSI*TNALAFPRHRLQ*CNHLRHGHSS*NNYF 158
Score = 73.5 bits (154), Expect(5) = 2e-033
Identities = 34/46 (73%), Positives = 37/46 (80%)
Frame = +3 / +1
Query: 60 GGPSD*QXXXXTV*CVCANKSSVHR*YISGELXXXXKT*FIYSRRN 197
GGPSD*Q TV*CVCANKSS+HR*+ISGEL KT*FI+S RN
Sbjct: 19 GGPSD*QRR*RTV*CVCANKSSIHR*HISGEL*GDYKT*FIHSGRN 156
Score = 73.0 bits (153), Expect(5) = 2e-033
Identities = 32/38 (84%), Positives = 33/38 (86%)
Frame = +1 / +3
Query: 397 K*LFQEG*PCLR*LHHWSPCHGKARTFV*IE*RDVKQA 510
K*LFQE *PCLR*LHHWS C GKAR FV*IE*RDV Q+
Sbjct: 159 K*LFQEE*PCLR*LHHWSLCRGKARAFV*IE*RDVTQS 272
Score = 44.1 bits (90), Expect(5) = 6e-065
Identities = 16/21 (76%), Positives = 17/21 (80%)
Frame = +3 / +2
Query: 621 HVIWIEEQLCAELLWHSVVQG 683
HVIWIEEQLCAE WHS +G
Sbjct: 335 HVIWIEEQLCAEPSWHSKCRG 397
Score = 43.7 bits (89), Expect(6) = 4e-063
Identities = 16/21 (76%), Positives = 17/21 (80%)
Frame = -3 / -2
Query: 682 PCTTECHNSSAQSCSSIQITW 620
P ECH+ SAQSCSSIQITW
Sbjct: 396 PLHLECHDGSAQSCSSIQITW 334
Score = 42.3 bits (86), Expect(5) = 6e-065
Identities = 16/23 (69%), Positives = 17/23 (73%)
Frame = +2 / +3
Query: 674 SAGEASC*CPGILFPHKLCYSLC 742
SAGEASC*C GIL H C +LC
Sbjct: 387 SAGEASC*CSGILLSHSCCATLC 455
Score = 40.5 bits (82), Expect(5) = 3e-055
Identities = 19/35 (54%), Positives = 22/35 (62%)
Frame = -3 / -3
Query: 1018 SVVCSLCNVRCYTSQL*TNLINNAPQA*TLAFWTS 914
S V L Y++QL*TNLI + P A TL FWTS
Sbjct: 572 SCVLPL*RKMLYSAQL*TNLITHTPHALTLTFWTS 468
Score = 40.0 bits (81), Expect(5) = 6e-065
Identities = 19/37 (51%), Positives = 24/37 (64%)
Frame = +3 / +1
Query: 909 LTLVQNANVYA*GALLIKFVYNCDV*HLTLQREHTTL 1019
L LVQN NV A*G +IKFVYNC + ++ + T L
Sbjct: 463 LVLVQNVNVNA*GV*VIKFVYNCALYNILRYKGSTQL 573
Score = 39.1 bits (79), Expect(6) = 3e-055
Identities = 16/22 (72%), Positives = 17/22 (77%)
Frame = +2 / +1
Query: 620 PCDLDRGAALC*AIVAFCSAGE 685
PCDLDRGA LC AIVAF G+
Sbjct: 334 PCDLDRGATLCRAIVAFQVQGK 399
Score = 38.2 bits (77), Expect(5) = 3e-055
Identities = 14/21 (66%), Positives = 17/21 (80%)
Frame = -1 / -3
Query: 681 PALQNATIAQHKAAPLSKSHG 619
P NAT+A+H+ APLSKSHG
Sbjct: 395 PCTWNATMARHRVAPLSKSHG 333
Score = 35.0 bits (70), Expect(6) = 4e-063
Identities = 14/19 (73%), Positives = 15/19 (78%)
Frame = -3 / -3
Query: 730 AQLVWE*YPWASTRCFPCT 674
A V +*YP ASTRCFPCT
Sbjct: 443 ATRVRQ*YPRASTRCFPCT 387
Score = 33.6 bits (67), Expect(6) = 3e-055
Identities = 14/19 (73%), Positives = 14/19 (73%)
Frame = +3 / +1
Query: 675 VQGKHRVDAQGYYSHTSCA 731
VQGKHRVDA GYY T A
Sbjct: 388 VQGKHRVDALGYYCLTLVA 444
Score = 33.1 bits (66), Expect(5) = 3e-055
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = -1 / -1
Query: 714 NNIPGHQHDASPAL 673
N+IP HQHDASPAL
Sbjct: 427 NSIPEHQHDASPAL 386
Score = 32.7 bits (65), Expect(6) = 4e-063
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = -2 / -2
Query: 977 TVINEFNQ*CTSSIDVSILDQ 915
TV+NEFN TS +DV+ILD+
Sbjct: 531 TVVNEFNHSHTSRVDVNILDK 469
Score = 32.2 bits (64), Expect(4) = 9e-028
Identities = 12/16 (75%), Positives = 14/16 (87%)
Frame = -2 / -1
Query: 668 MPQ*LSTKLLLYPNHM 621
MP+ L T+LLLYPNHM
Sbjct: 382 MPRWLGTELLLYPNHM 335
Score = 30.4 bits (60), Expect(6) = 4e-063
Identities = 11/13 (84%), Positives = 12/13 (92%)
Frame = -3 / -1
Query: 1015 VVCSLCNVRCYTS 977
VVCSL NVRCYT+
Sbjct: 571 VVCSLYNVRCYTA 533
Score = 29.0 bits (57), Expect(6) = 3e-055
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = +3 / +3
Query: 975 CDV*HLTLQREHTT 1016
C V*HLTL REHTT
Sbjct: 531 CAV*HLTL*REHTT 572
Score = 29.0 bits (57), Expect(6) = 3e-055
Identities = 15/20 (75%), Positives = 15/20 (75%)
Frame = +1 / +2
Query: 919 SKMLTSMLEVHY*LNSFITV 978
SKMLTS EV *LNSF TV
Sbjct: 473 SKMLTSTREVCE*LNSFTTV 532
Score = 28.6 bits (56), Expect(4) = 9e-028
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = -1 / -1
Query: 1020 RALCALFVT*DVIHHSYKRI*SIMHLKHRR*H 925
+ +C+L+ HS KRI*S+ HL R*H
Sbjct: 574 QVVCSLYNVRCYTAHSCKRI*SLTHLTR*R*H 479
Score = 27.2 bits (53), Expect(5) = 2e-033
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = +2 / +2
Query: 980 CITSYVTKRAHN 1015
CITSYV K AHN
Sbjct: 536 CITSYVIKGAHN 571
Score = 26.7 bits (52), Expect(4) = 9e-028
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = -2 / -2
Query: 713 IISLGINTMLPLH 675
I+S INTMLPLH
Sbjct: 426 IVSQSINTMLPLH 388
Score = 23.5 bits (45), Expect(5) = 2e-033
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +1 / +3
Query: 616 LAM*FG*RSSFVLSYCGI 669
L M*FG*RS+ V S+ GI
Sbjct: 330 LTM*FG*RSNSVPSHRGI 383
Score = 23.1 bits (44), Expect(5) = 2e-033
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = +1 / +2
Query: 676 CRGSIVLMPRDII 714
CRGSIVLM D I
Sbjct: 389 CRGSIVLMLWDTI 427
>gb|BG465944.1|BG465944 RHIZ2_46_E09.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 602
Score = 101 bits (216), Expect(4) = 2e-062
Identities = 42/49 (85%), Positives = 44/49 (89%)
Frame = +1 / +2
Query: 64 VLQTDKGDEELCSVYVPTNHLYIGDIFLVNSXXXXRPNLSIREGIGMVV 210
VLQTDKGDEELCSVYVPTNHLYIGDIFLVNS RPNLSIREGI ++V
Sbjct: 2 VLQTDKGDEELCSVYVPTNHLYIGDIFLVNSEEIIRPNLSIREGIEIIV 148
Score = 95.0 bits (201), Expect(4) = 2e-059
Identities = 41/50 (82%), Positives = 44/50 (88%)
Frame = -2 / -3
Query: 212 QTTIPIPSRIDKLGLXXXXEFTRNISPMYR*FVGTYTLHSSSSPLSV*RT 63
+T I IPSR+DKLGL EFTRN+SPMYR*FVGTYTLHSSSSPLSV*RT
Sbjct: 150 ETIISIPSRMDKLGLMISSEFTRNMSPMYR*FVGTYTLHSSSSPLSV*RT 1
Score = 86.3 bits (182), Expect(4) = 3e-051
Identities = 35/49 (71%), Positives = 39/49 (79%)
Frame = -1 / -2
Query: 210 NYHTDSFSNR*IRSXXXXXVHQKYITDVQMICWHIHTTQFFVAFVSLKD 64
N + +SF N *IRS VHQKY+TDV MICWHIHTTQFF+AFVSLKD
Sbjct: 148 NNYFNSFPNG*IRSYDLLRVHQKYVTDV*MICWHIHTTQFFIAFVSLKD 2
Score = 85.4 bits (180), Expect(4) = 2e-059
Identities = 35/41 (85%), Positives = 38/41 (92%)
Frame = -3 / -3
Query: 505 VLHHVILFRRMFWLFRGMGSSDAIT*GMVIPPETIISAETK 383
VLHHVILFRRM WLFRG+GSSDAIT*GMVIPPETIIS ++
Sbjct: 246 VLHHVILFRRMLWLFRGIGSSDAIT*GMVIPPETIISIPSR 124
Score = 84.5 bits (178), Expect(4) = 2e-062
Identities = 33/37 (89%), Positives = 36/37 (97%)
Frame = +2 / +1
Query: 398 NNCFRRDDHASGDCITGAHATEKPEHSSK*NDVM*NK 508
NNCFRR+DHASGDCITGA+A EKPEHSSK*NDVM*+K
Sbjct: 139 NNCFRRNDHASGDCITGAYAAEKPEHSSK*NDVM*HK 249
Score = 82.2 bits (173), Expect(3) = 3e-025
Identities = 37/51 (72%), Positives = 39/51 (76%)
Frame = -3 / -1
Query: 217 LTKLPYRFLLE*IN*VLXXXXSSPEIYHRCTDDLLAHTHYTVLRRLCQSEG 65
L K ++FL E IN*VL SSPEI HRC DDLLAHTHYTVL RLCQSEG
Sbjct: 155 LLKQLFQFLPEWIN*VL*SPQSSPEICHRCIDDLLAHTHYTVLHRLCQSEG 3
Score = 82.2 bits (173), Expect(5) = 4e-053
Identities = 35/37 (94%), Positives = 36/37 (97%)
Frame = +3 / +2
Query: 396 EIIVSGGMTMPQVIASLEPMPRKSQNIRLNRMT*CKT 506
EIIVSGGMTMPQVIASLEPMPRKSQ+IRLNRMT*C T
Sbjct: 137 EIIVSGGMTMPQVIASLEPMPRKSQSIRLNRMT*CNT 247
Score = 81.3 bits (171), Expect(5) = 4e-053
Identities = 35/44 (79%), Positives = 35/44 (79%)
Frame = +2 / +3
Query: 65 SFRLTKATKNCVVCMCQQIICTSVIYFW*TXXXX*DLIYLFEKE 196
SFRLTKA KNCVVCMCQQII TSV YFW*T *DLIY F KE
Sbjct: 3 SFRLTKAMKNCVVCMCQQIIYTSVTYFW*TLRRS*DLIYPFGKE 134
Score = 79.4 bits (167), Expect(4) = 3e-051
Identities = 32/37 (86%), Positives = 32/37 (86%)
Frame = -2 / -2
Query: 506 CFTSRHSI*TNVLAFPWHGLQ*CNHLRHGHPS*NNYF 396
C TSRHSI*TN LAFP H LQ*CNHLRHGH S*NNYF
Sbjct: 247 CVTSRHSI*TNALAFPRHRLQ*CNHLRHGHSS*NNYF 137
Score = 73.0 bits (153), Expect(4) = 9e-033
Identities = 32/38 (84%), Positives = 33/38 (86%)
Frame = +1 / +3
Query: 397 K*LFQEG*PCLR*LHHWSPCHGKARTFV*IE*RDVKQA 510
K*LFQE *PCLR*LHHWS C GKAR FV*IE*RDV Q+
Sbjct: 138 K*LFQEE*PCLR*LHHWSLCRGKARAFV*IE*RDVTQS 251
Score = 71.6 bits (150), Expect(4) = 2e-062
Identities = 29/41 (70%), Positives = 30/41 (73%)
Frame = +2 / +1
Query: 620 PCDLDRGAALC*AIVAFCSAGEASC*CPGILFPHKLCYSLC 742
PCDLDRGA LC AIVAF GEASC*C GIL H C +LC
Sbjct: 313 PCDLDRGATLCRAIVAFQVQGEASC*CSGILLSHSCCATLC 435
Score = 70.7 bits (148), Expect(4) = 9e-033
Identities = 33/45 (73%), Positives = 36/45 (80%)
Frame = +3 / +1
Query: 63 GPSD*QXXXXTV*CVCANKSSVHR*YISGELXXXXKT*FIYSRRN 197
GPSD*Q TV*CVCANKSS+HR*+ISGEL KT*FI+S RN
Sbjct: 1 GPSD*QRR*RTV*CVCANKSSIHR*HISGEL*GDHKT*FIHSGRN 135
Score = 64.8 bits (135), Expect(5) = 4e-053
Identities = 26/37 (70%), Positives = 27/37 (72%)
Frame = +3 / +2
Query: 621 HVIWIEEQLCAELLWHSVVQGKHRVDAQGYYSHTSCA 731
HVIWIEEQLCA WHS +GKHRVDA GYY T A
Sbjct: 314 HVIWIEEQLCAVPSWHSKCRGKHRVDALGYYCLTLVA 424
Score = 64.8 bits (135), Expect(4) = 2e-059
Identities = 26/37 (70%), Positives = 29/37 (78%)
Frame = -3 / -3
Query: 730 AQLVWE*YPWASTRCFPCTTECHNSSAQSCSSIQITW 620
A V +*YP ASTRCFP ECH+ +AQSCSSIQITW
Sbjct: 423 ATRVRQ*YPRASTRCFPLHLECHDGTAQSCSSIQITW 313
Score = 61.6 bits (128), Expect(4) = 3e-051
Identities = 23/32 (71%), Positives = 27/32 (84%)
Frame = -1 / -1
Query: 714 NNIPGHQHDASPALQNATIAQHKAAPLSKSHG 619
N+IP HQHDASP NAT+A+H+ APLSKSHG
Sbjct: 407 NSIPEHQHDASPCTWNATMARHRVAPLSKSHG 312
Score = 47.3 bits (97), Expect(4) = 2e-059
Identities = 22/38 (57%), Positives = 25/38 (65%)
Frame = -3 / -3
Query: 1027 SGQSVVCSLCNVRCYTSQL*TNLINNAPQA*TLAFWTS 914
SGQS V L Y++QL*TNLI + P A TL FWTS
Sbjct: 561 SGQSCVLPL*RKMLYSAQL*TNLITHTPHALTLTFWTS 448
Score = 44.6 bits (91), Expect(4) = 2e-062
Identities = 21/40 (52%), Positives = 27/40 (67%)
Frame = +3 / +2
Query: 909 LTLVQNANVYA*GALLIKFVYNCDV*HLTLQREHTTL*PE 1028
L LVQN NV A*G +IKFVYNC + ++ + T L*P+
Sbjct: 443 LVLVQNVNVNA*GV*VIKFVYNCALYNILRYKGSTQL*PD 562
Score = 43.7 bits (89), Expect(3) = 3e-025
Identities = 19/31 (61%), Positives = 22/31 (70%)
Frame = -2 / -2
Query: 713 IISLGINTMLPLHYRMPQ*LSTKLLLYPNHM 621
I+S INTMLP MP+ T+LLLYPNHM
Sbjct: 406 IVSQSINTMLPPALGMPRWHGTELLLYPNHM 314
Score = 37.3 bits (75), Expect(4) = 3e-051
Identities = 16/37 (43%), Positives = 24/37 (64%)
Frame = -2 / -2
Query: 1025 WSERCVLSL*RKMLYITVINEFNQ*CTSSIDVSILDQ 915
WS+ C + ++ TV+NEFN TS +DV+ILD+
Sbjct: 559 WSKLCAPFIT*DVIQRTVVNEFNHSHTSRVDVNILDK 449
Score = 32.7 bits (65), Expect(3) = 3e-025
Identities = 16/34 (47%), Positives = 21/34 (61%)
Frame = -1 / -1
Query: 1026 LVRALCALFVT*DVIHHSYKRI*SIMHLKHRR*H 925
LV+ +C+L+ HS KRI*S+ HL R*H
Sbjct: 560 LVKVVCSLYNVRCYTAHSCKRI*SLTHLTR*R*H 459
Score = 30.9 bits (61), Expect(5) = 4e-053
Identities = 13/15 (86%), Positives = 13/15 (86%)
Frame = +3 / +1
Query: 975 CDV*HLTLQREHTTL 1019
C V*HLTL REHTTL
Sbjct: 511 CAV*HLTL*REHTTL 555
Score = 30.9 bits (61), Expect(4) = 9e-033
Identities = 19/33 (57%), Positives = 21/33 (63%)
Frame = +1 / +3
Query: 616 LAM*FG*RSSFVLSYCGIL*CRGSIVLMPRDII 714
L M*FG*RS+ V + GI GSIVLM D I
Sbjct: 309 LTM*FG*RSNSVPCHRGIPSAGGSIVLMLWDTI 407
Score = 29.5 bits (58), Expect(5) = 4e-053
Identities = 16/23 (69%), Positives = 17/23 (73%)
Frame = +1 / +3
Query: 910 *HWSKMLTSMLEVHY*LNSFITV 978
*+ SKMLTS EV *LNSF TV
Sbjct: 444 *YLSKMLTSTREVCE*LNSFTTV 512
Score = 27.2 bits (53), Expect(4) = 9e-033
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = +2 / +3
Query: 980 CITSYVTKRAHN 1015
CITSYV K AHN
Sbjct: 516 CITSYVIKGAHN 551
>gb|CN139974.1|CN139974 OX1_33_F07.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_33_F07_A002 3', mRNA sequence
Length = 608
Score = 144 bits (308), Expect(3) = 3e-062
Identities = 60/69 (86%), Positives = 62/69 (89%)
Frame = +1 / +2
Query: 4 AIIRHPRIGEYAFGFITSTVVLQTDKGDEELCSVYVPTNHLYIGDIFLVNSXXXXRPNLS 183
AIIRHPRIGEYA GFITSTVVLQTDKGDEELCSVYVPTNHLYIGDIFLVN RPNLS
Sbjct: 116 AIIRHPRIGEYALGFITSTVVLQTDKGDEELCSVYVPTNHLYIGDIFLVNCEEIIRPNLS 295
Query: 184 IREGIGMVV 210
IREGI ++V
Sbjct: 296 IREGIEIIV 322
Score = 138 bits (296), Expect(3) = 3e-058
Identities = 60/70 (85%), Positives = 64/70 (91%)
Frame = -2 / -3
Query: 212 QTTIPIPSRIDKLGLXXXXEFTRNISPMYR*FVGTYTLHSSSSPLSV*RTTVDVMNPNAY 33
+T I IPSR+DKLGL +FTRN+SPMYR*FVGTYTLHSSSSPLSV*RTTVDVMNPNAY
Sbjct: 324 ETIISIPSRMDKLGLIISSQFTRNMSPMYR*FVGTYTLHSSSSPLSV*RTTVDVMNPNAY 145
Query: 32 SPIRG*RIIA 3
SPIRG*RIIA
Sbjct: 144 SPIRG*RIIA 115
Score = 127 bits (272), Expect(3) = 1e-053
Identities = 50/69 (72%), Positives = 56/69 (81%)
Frame = -1 / -2
Query: 210 NYHTDSFSNR*IRSXXXXXVHQKYITDVQMICWHIHTTQFFVAFVSLKDHR*CYESKCIF 31
N + +SF N *IRS VHQKY+TDV MICW IHTTQFF+AFVSLKDHR*CYES+C+F
Sbjct: 322 NNYFNSFPNG*IRSYNLLTVHQKYVTDV*MICWDIHTTQFFIAFVSLKDHR*CYESQCVF 143
Query: 30 TNSWMTNYC 4
NS MTNYC
Sbjct: 142 ANSGMTNYC 116
Score = 113 bits (242), Expect(2) = 5e-030
Identities = 52/71 (73%), Positives = 54/71 (76%)
Frame = -3 / -1
Query: 217 LTKLPYRFLLE*IN*VLXXXXSSPEIYHRCTDDLLAHTHYTVLRRLCQSEGPPLML*IQM 38
L K ++FL E IN*VL SSPEI HRC DDLL HTHYTVL RLCQSEGPPLML*I M
Sbjct: 329 LLKQLFQFLPEWIN*VL*SPHSSPEICHRCIDDLLGHTHYTVLHRLCQSEGPPLML*IPM 150
Query: 37 HIHQFVDDELL 5
I QF DDELL
Sbjct: 149 RIRQFGDDELL 117
Score = 111 bits (238), Expect(3) = 5e-048
Identities = 50/64 (78%), Positives = 50/64 (78%)
Frame = +2 / +3
Query: 5 Q*FVIHELVNMHLDS*HQRWSFRLTKATKNCVVCMCQQIICTSVIYFW*TXXXX*DLIYL 184
Q*FVI EL N H DS*HQRWSFRLTKA KNCVVCM QQII TSV YFW*T *DLIY
Sbjct: 117 Q*FVIPELANTHWDS*HQRWSFRLTKAMKNCVVCMSQQIIYTSVTYFW*TVRRL*DLIYP 296
Query: 185 FEKE 196
F KE
Sbjct: 297 FGKE 308
Score = 82.2 bits (173), Expect(3) = 3e-058
Identities = 34/41 (82%), Positives = 37/41 (90%)
Frame = -3 / -3
Query: 505 VLHHVILFRRMFWLFRGMGSSDAIT*GMVIPPETIISAETK 383
VLHH ILFRRM WLFRG+GSSDAIT*GMVIPPETIIS ++
Sbjct: 420 VLHHDILFRRMLWLFRGIGSSDAIT*GMVIPPETIISIPSR 298
Score = 80.3 bits (169), Expect(3) = 5e-048
Identities = 32/37 (86%), Positives = 35/37 (94%)
Frame = +2 / +1
Query: 398 NNCFRRDDHASGDCITGAHATEKPEHSSK*NDVM*NK 508
NNCFRR+DHASGDCITGA+A EKPEHSSK*N VM*+K
Sbjct: 313 NNCFRRNDHASGDCITGAYAAEKPEHSSK*NVVM*HK 423
Score = 80.3 bits (169), Expect(3) = 3e-062
Identities = 34/37 (91%), Positives = 36/37 (97%)
Frame = +3 / +2
Query: 396 EIIVSGGMTMPQVIASLEPMPRKSQNIRLNRMT*CKT 506
EIIVSGGMTMPQVIASLEPMPRKSQ+IRLNRM+*C T
Sbjct: 311 EIIVSGGMTMPQVIASLEPMPRKSQSIRLNRMS*CNT 421
Score = 79.4 bits (167), Expect(3) = 1e-053
Identities = 32/37 (86%), Positives = 32/37 (86%)
Frame = -2 / -2
Query: 506 CFTSRHSI*TNVLAFPWHGLQ*CNHLRHGHPS*NNYF 396
C TSRHSI*TN LAFP H LQ*CNHLRHGH S*NNYF
Sbjct: 421 CVTSRHSI*TNALAFPRHRLQ*CNHLRHGHSS*NNYF 311
Score = 75.8 bits (159), Expect(3) = 3e-030
Identities = 38/64 (59%), Positives = 41/64 (64%)
Frame = +3 / +1
Query: 6 NNSSSTXXXXXXXXXXXXGGPSD*QXXXXTV*CVCANKSSVHR*YISGELXXXXKT*FIY 185
NNSSS GGPSD*Q TV*CVC NKSS+HR*+ISGEL KT*FI+
Sbjct: 118 NNSSSPNWRIRIGIHNINGGPSD*QRR*RTV*CVCPNKSSIHR*HISGEL*GDYKT*FIH 297
Query: 186 SRRN 197
S RN
Sbjct: 298 SGRN 309
Score = 70.7 bits (148), Expect(3) = 3e-030
Identities = 31/38 (81%), Positives = 32/38 (84%)
Frame = +1 / +3
Query: 397 K*LFQEG*PCLR*LHHWSPCHGKARTFV*IE*RDVKQA 510
K*LFQE *PCLR*LHHWS C GKAR FV*IE RDV Q+
Sbjct: 312 K*LFQEE*PCLR*LHHWSLCRGKARAFV*IECRDVTQS 425
Score = 59.3 bits (123), Expect(3) = 3e-062
Identities = 24/40 (60%), Positives = 27/40 (67%)
Frame = +2 / +1
Query: 620 PCDLDRGAALC*AIVAFCSAGEASC*CPGILFPHKLCYSL 739
PCD DRGA LC + F SAGEASC*C GI+ H C +L
Sbjct: 487 PCDWDRGATLCASHRGFPSAGEASC*CSGIILSHSCCATL 606
Score = 49.2 bits (101), Expect(3) = 3e-058
Identities = 20/30 (66%), Positives = 22/30 (73%)
Frame = -3 / -3
Query: 709 YPWASTRCFPCTTECHNSSAQSCSSIQITW 620
YP ASTR FPCT + + AQSCSSI ITW
Sbjct: 576 YPRASTRGFPCTWKATMARAQSCSSIPITW 487
Score = 47.3 bits (97), Expect(3) = 1e-053
Identities = 19/32 (59%), Positives = 22/32 (68%)
Frame = -1 / -1
Query: 714 NNIPGHQHDASPALQNATIAQHKAAPLSKSHG 619
N IP HQH+ASPAL H+ APLS+SHG
Sbjct: 581 NIIPEHQHEASPALGKPRWLAHRVAPLSQSHG 486
Score = 43.2 bits (88), Expect(3) = 5e-048
Identities = 22/37 (59%), Positives = 23/37 (62%)
Frame = +3 / +2
Query: 621 HVIWIEEQLCAELLWHSVVQGKHRVDAQGYYSHTSCA 731
HVI IEEQLCA + VQGK RVDA G Y T A
Sbjct: 488 HVIGIEEQLCARAIVAFQVQGKPRVDALG*YCLTLVA 598
Score = 41.8 bits (85), Expect(2) = 5e-030
Identities = 18/31 (58%), Positives = 20/31 (64%)
Frame = -2 / -2
Query: 713 IISLGINTMLPLHYRMPQ*LSTKLLLYPNHM 621
I+S INT LPLH T+LLLYPNHM
Sbjct: 580 ILSQSINTRLPLHLESHDGSRTELLLYPNHM 488
Score = 29.0 bits (57), Expect(3) = 3e-030
Identities = 17/33 (51%), Positives = 20/33 (60%)
Frame = +1 / +3
Query: 616 LAM*FG*RSSFVLSYCGIL*CRGSIVLMPRDII 714
L M* G*RS+ V + CRGS+VLM D I
Sbjct: 483 LTM*LG*RSNSVREPSWLSKCRGSLVLMLWDNI 581
>gb|BG159361.1|BG159361 OV2_6_G12.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA sequence
Length = 486
Score = 149 bits (319), Expect(3) = 9e-061
Identities = 62/69 (89%), Positives = 64/69 (92%)
Frame = +1 / +3
Query: 4 AIIRHPRIGEYAFGFITSTVVLQTDKGDEELCSVYVPTNHLYIGDIFLVNSXXXXRPNLS 183
AIIRHPRIGEYAFGFITSTVVLQTDKGDEELCSVYVPTNHLYIGDIFLVNS RPNLS
Sbjct: 42 AIIRHPRIGEYAFGFITSTVVLQTDKGDEELCSVYVPTNHLYIGDIFLVNSEEIIRPNLS 221
Query: 184 IREGIGMVV 210
IREGI ++V
Sbjct: 222 IREGIEIIV 248
Score = 141 bits (303), Expect(4) = 2e-060
Identities = 55/69 (79%), Positives = 59/69 (85%)
Frame = -1 / -2
Query: 210 NYHTDSFSNR*IRSXXXXXVHQKYITDVQMICWHIHTTQFFVAFVSLKDHR*CYESKCIF 31
N + +SF N *IRS VHQKY+TDV MICWHIHTTQFF+AFVSLKDHR*CYESKCIF
Sbjct: 248 NNYFNSFPNG*IRSYNLLRVHQKYVTDV*MICWHIHTTQFFIAFVSLKDHR*CYESKCIF 69
Query: 30 TNSWMTNYC 4
TNSWMTNYC
Sbjct: 68 TNSWMTNYC 42
Score = 139 bits (299), Expect(3) = 9e-055
Identities = 61/70 (87%), Positives = 64/70 (91%)
Frame = -2 / -3
Query: 212 QTTIPIPSRIDKLGLXXXXEFTRNISPMYR*FVGTYTLHSSSSPLSV*RTTVDVMNPNAY 33
+T I IPSR+DKLGL EFTRN+SPMYR*FVGTYTLHSSSSPLSV*RTTVDVMNPNAY
Sbjct: 250 ETIISIPSRMDKLGLIISSEFTRNMSPMYR*FVGTYTLHSSSSPLSV*RTTVDVMNPNAY 71
Query: 32 SPIRG*RIIA 3
SPIRG*RIIA
Sbjct: 70 SPIRG*RIIA 41
Score = 128 bits (275), Expect(2) = 8e-032
Identities = 57/71 (80%), Positives = 59/71 (83%)
Frame = -3 / -1
Query: 217 LTKLPYRFLLE*IN*VLXXXXSSPEIYHRCTDDLLAHTHYTVLRRLCQSEGPPLML*IQM 38
L K ++FL E IN*VL SSPEI HRC DDLLAHTHYTVL RLCQSEGPPLML*IQM
Sbjct: 255 LLKQLFQFLPEWIN*VL*SPQSSPEICHRCIDDLLAHTHYTVLHRLCQSEGPPLML*IQM 76
Query: 37 HIHQFVDDELL 5
HIHQFVDDELL
Sbjct: 75 HIHQFVDDELL 43
Score = 128 bits (274), Expect(3) = 2e-052
Identities = 55/64 (85%), Positives = 55/64 (85%)
Frame = +2 / +1
Query: 5 Q*FVIHELVNMHLDS*HQRWSFRLTKATKNCVVCMCQQIICTSVIYFW*TXXXX*DLIYL 184
Q*FVIHELVNMHLDS*HQRWSFRLTKA KNCVVCMCQQII TSV YFW*T *DLIY
Sbjct: 43 Q*FVIHELVNMHLDS*HQRWSFRLTKAMKNCVVCMCQQIIYTSVTYFW*TLRRL*DLIYP 222
Query: 185 FEKE 196
F KE
Sbjct: 223 FGKE 234
Score = 85.4 bits (180), Expect(4) = 2e-060
Identities = 35/41 (85%), Positives = 38/41 (92%)
Frame = -3 / -3
Query: 505 VLHHVILFRRMFWLFRGMGSSDAIT*GMVIPPETIISAETK 383
VLHHVILFRRM WLFRG+GSSDAIT*GMVIPPETIIS ++
Sbjct: 346 VLHHVILFRRMLWLFRGIGSSDAIT*GMVIPPETIISIPSR 224
Score = 84.5 bits (178), Expect(3) = 9e-061
Identities = 33/37 (89%), Positives = 36/37 (97%)
Frame = +2 / +2
Query: 398 NNCFRRDDHASGDCITGAHATEKPEHSSK*NDVM*NK 508
NNCFRR+DHASGDCITGA+A EKPEHSSK*NDVM*+K
Sbjct: 239 NNCFRRNDHASGDCITGAYAAEKPEHSSK*NDVM*HK 349
Score = 82.2 bits (173), Expect(3) = 2e-052
Identities = 35/37 (94%), Positives = 36/37 (97%)
Frame = +3 / +3
Query: 396 EIIVSGGMTMPQVIASLEPMPRKSQNIRLNRMT*CKT 506
EIIVSGGMTMPQVIASLEPMPRKSQ+IRLNRMT*C T
Sbjct: 237 EIIVSGGMTMPQVIASLEPMPRKSQSIRLNRMT*CNT 347
Score = 79.4 bits (167), Expect(3) = 9e-055
Identities = 32/37 (86%), Positives = 32/37 (86%)
Frame = -2 / -2
Query: 506 CFTSRHSI*TNVLAFPWHGLQ*CNHLRHGHPS*NNYF 396
C TSRHSI*TN LAFP H LQ*CNHLRHGH S*NNYF
Sbjct: 347 CVTSRHSI*TNALAFPRHRLQ*CNHLRHGHSS*NNYF 237
Score = 73.5 bits (154), Expect(3) = 7e-029
Identities = 34/46 (73%), Positives = 37/46 (80%)
Frame = +3 / +2
Query: 60 GGPSD*QXXXXTV*CVCANKSSVHR*YISGELXXXXKT*FIYSRRN 197
GGPSD*Q TV*CVCANKSS+HR*+ISGEL KT*FI+S RN
Sbjct: 98 GGPSD*QRR*RTV*CVCANKSSIHR*HISGEL*GDYKT*FIHSGRN 235
Score = 73.0 bits (153), Expect(3) = 7e-029
Identities = 32/38 (84%), Positives = 33/38 (86%)
Frame = +1 / +1
Query: 397 K*LFQEG*PCLR*LHHWSPCHGKARTFV*IE*RDVKQA 510
K*LFQE *PCLR*LHHWS C GKAR FV*IE*RDV Q+
Sbjct: 238 K*LFQEE*PCLR*LHHWSLCRGKARAFV*IE*RDVTQS 351
Score = 44.1 bits (90), Expect(3) = 9e-061
Identities = 16/21 (76%), Positives = 17/21 (80%)
Frame = +3 / +3
Query: 621 HVIWIEEQLCAELLWHSVVQG 683
HVIWIEEQLCAE WHS +G
Sbjct: 414 HVIWIEEQLCAEPSWHSKCRG 476
Score = 43.7 bits (89), Expect(4) = 2e-060
Identities = 16/21 (76%), Positives = 17/21 (80%)
Frame = -3 / -3
Query: 682 PCTTECHNSSAQSCSSIQITW 620
P ECH+ SAQSCSSIQITW
Sbjct: 475 PLHLECHDGSAQSCSSIQITW 413
Score = 39.1 bits (79), Expect(3) = 2e-052
Identities = 16/22 (72%), Positives = 17/22 (77%)
Frame = +2 / +2
Query: 620 PCDLDRGAALC*AIVAFCSAGE 685
PCDLDRGA LC AIVAF G+
Sbjct: 413 PCDLDRGATLCRAIVAFQVQGK 478
Score = 38.2 bits (77), Expect(3) = 9e-055
Identities = 14/21 (66%), Positives = 17/21 (80%)
Frame = -1 / -1
Query: 681 PALQNATIAQHKAAPLSKSHG 619
P NAT+A+H+ APLSKSHG
Sbjct: 474 PCTWNATMARHRVAPLSKSHG 412
Score = 32.2 bits (64), Expect(2) = 8e-032
Identities = 12/16 (75%), Positives = 14/16 (87%)
Frame = -2 / -2
Query: 668 MPQ*LSTKLLLYPNHM 621
MP+ L T+LLLYPNHM
Sbjct: 461 MPRWLGTELLLYPNHM 414
Score = 24.0 bits (46), Expect(4) = 2e-060
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -3 / -1
Query: 694 TRCFPCT 674
TRCFPCT
Sbjct: 486 TRCFPCT 466
Score = 23.5 bits (45), Expect(3) = 7e-029
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +1 / +1
Query: 616 LAM*FG*RSSFVLSYCGI 669
L M*FG*RS+ V S+ GI
Sbjct: 409 LTM*FG*RSNSVPSHRGI 462
>gb|CD228545.1|CD228545 CCC1_8_A06.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_8_A06_A007 3', mRNA sequence
Length = 652
Score = 97.7 bits (207), Expect(5) = 3e-060
Identities = 40/48 (83%), Positives = 43/48 (89%)
Frame = +1 / +3
Query: 67 LQTDKGDEELCSVYVPTNHLYIGDIFLVNSXXXXRPNLSIREGIGMVV 210
LQTDKGDEELCSVYVPTNHLYIGDIFLV+S RPNLSIREGI ++V
Sbjct: 3 LQTDKGDEELCSVYVPTNHLYIGDIFLVDSEEIIRPNLSIREGIEIIV 146
Score = 89.0 bits (188), Expect(5) = 2e-056
Identities = 39/49 (79%), Positives = 42/49 (85%)
Frame = -2 / -1
Query: 212 QTTIPIPSRIDKLGLXXXXEFTRNISPMYR*FVGTYTLHSSSSPLSV*R 66
+T I IPSR+DKLGL E TRN+SPMYR*FVGTYTLHSSSSPLSV*R
Sbjct: 148 ETIISIPSRMDKLGLIISSESTRNMSPMYR*FVGTYTLHSSSSPLSV*R 2
Score = 85.4 bits (180), Expect(5) = 2e-056
Identities = 35/41 (85%), Positives = 38/41 (92%)
Frame = -3 / -1
Query: 505 VLHHVILFRRMFWLFRGMGSSDAIT*GMVIPPETIISAETK 383
VLHHVILFRRM WLFRG+GSSDAIT*GMVIPPETIIS ++
Sbjct: 244 VLHHVILFRRMLWLFRGIGSSDAIT*GMVIPPETIISIPSR 122
Score = 84.5 bits (178), Expect(5) = 3e-060
Identities = 33/37 (89%), Positives = 36/37 (97%)
Frame = +2 / +2
Query: 398 NNCFRRDDHASGDCITGAHATEKPEHSSK*NDVM*NK 508
NNCFRR+DHASGDCITGA+A EKPEHSSK*NDVM*+K
Sbjct: 137 NNCFRRNDHASGDCITGAYAAEKPEHSSK*NDVM*HK 247
Score = 83.5 bits (176), Expect(5) = 5e-048
Identities = 34/48 (70%), Positives = 38/48 (79%)
Frame = -1 / -3
Query: 210 NYHTDSFSNR*IRSXXXXXVHQKYITDVQMICWHIHTTQFFVAFVSLK 67
N + +SF N *IRS VHQKY+TDV MICWHIHTTQFF+AFVSLK
Sbjct: 146 NNYFNSFPNG*IRSYNLLRVHQKYVTDV*MICWHIHTTQFFIAFVSLK 3
Score = 82.2 bits (173), Expect(6) = 2e-049
Identities = 35/37 (94%), Positives = 36/37 (97%)
Frame = +3 / +3
Query: 396 EIIVSGGMTMPQVIASLEPMPRKSQNIRLNRMT*CKT 506
EIIVSGGMTMPQVIASLEPMPRKSQ+IRLNRMT*C T
Sbjct: 135 EIIVSGGMTMPQVIASLEPMPRKSQSIRLNRMT*CNT 245
Score = 79.9 bits (168), Expect(4) = 7e-024
Identities = 36/51 (70%), Positives = 38/51 (74%)
Frame = -3 / -2
Query: 217 LTKLPYRFLLE*IN*VLXXXXSSPEIYHRCTDDLLAHTHYTVLRRLCQSEG 65
L K ++FL E IN*VL S PEI HRC DDLLAHTHYTVL RLCQSEG
Sbjct: 153 LLKQLFQFLPEWIN*VL*SPQSPPEICHRCIDDLLAHTHYTVLHRLCQSEG 1
Score = 79.4 bits (167), Expect(5) = 5e-048
Identities = 32/37 (86%), Positives = 32/37 (86%)
Frame = -2 / -3
Query: 506 CFTSRHSI*TNVLAFPWHGLQ*CNHLRHGHPS*NNYF 396
C TSRHSI*TN LAFP H LQ*CNHLRHGH S*NNYF
Sbjct: 245 CVTSRHSI*TNALAFPRHRLQ*CNHLRHGHSS*NNYF 135
Score = 78.5 bits (165), Expect(6) = 2e-049
Identities = 34/44 (77%), Positives = 34/44 (77%)
Frame = +2 / +1
Query: 65 SFRLTKATKNCVVCMCQQIICTSVIYFW*TXXXX*DLIYLFEKE 196
SFRLTKA KNCVVCMCQQII TSV YFW T *DLIY F KE
Sbjct: 1 SFRLTKAMKNCVVCMCQQIIYTSVTYFWWTLRRL*DLIYPFGKE 132
Score = 73.0 bits (153), Expect(5) = 1e-030
Identities = 32/38 (84%), Positives = 33/38 (86%)
Frame = +1 / +1
Query: 397 K*LFQEG*PCLR*LHHWSPCHGKARTFV*IE*RDVKQA 510
K*LFQE *PCLR*LHHWS C GKAR FV*IE*RDV Q+
Sbjct: 136 K*LFQEE*PCLR*LHHWSLCRGKARAFV*IE*RDVTQS 249
Score = 64.8 bits (135), Expect(5) = 1e-030
Identities = 31/44 (70%), Positives = 34/44 (77%)
Frame = +3 / +2
Query: 66 PSD*QXXXXTV*CVCANKSSVHR*YISGELXXXXKT*FIYSRRN 197
PSD*Q TV*CVCANKSS+HR*+ISG L KT*FI+S RN
Sbjct: 2 PSD*QRR*RTV*CVCANKSSIHR*HISGGL*GDYKT*FIHSGRN 133
Score = 47.3 bits (97), Expect(5) = 2e-056
Identities = 22/38 (57%), Positives = 25/38 (65%)
Frame = -3 / -2
Query: 1027 SGQSVVCSLCNVRCYTSQL*TNLINNAPQA*TLAFWTS 914
SGQS V L Y++QL*TNLI + P A TL FWTS
Sbjct: 558 SGQSCVLPL*RKMLYSAQL*TNLITHTPHALTLTFWTS 445
Score = 44.6 bits (91), Expect(5) = 3e-060
Identities = 21/40 (52%), Positives = 27/40 (67%)
Frame = +3 / +2
Query: 909 LTLVQNANVYA*GALLIKFVYNCDV*HLTLQREHTTL*PE 1028
L LVQN NV A*G +IKFVYNC + ++ + T L*P+
Sbjct: 440 LVLVQNVNVNA*GV*VIKFVYNCALYNILRYKGSTQL*PD 559
Score = 44.1 bits (90), Expect(5) = 3e-060
Identities = 16/21 (76%), Positives = 17/21 (80%)
Frame = +3 / +3
Query: 621 HVIWIEEQLCAELLWHSVVQG 683
HVIWIEEQLCAE WHS +G
Sbjct: 312 HVIWIEEQLCAEPSWHSKCRG 374
Score = 43.7 bits (89), Expect(5) = 2e-056
Identities = 16/21 (76%), Positives = 17/21 (80%)
Frame = -3 / -1
Query: 682 PCTTECHNSSAQSCSSIQITW 620
P ECH+ SAQSCSSIQITW
Sbjct: 373 PLHLECHDGSAQSCSSIQITW 311
Score = 42.3 bits (86), Expect(5) = 3e-060
Identities = 16/23 (69%), Positives = 17/23 (73%)
Frame = +2 / +1
Query: 674 SAGEASC*CPGILFPHKLCYSLC 742
SAGEASC*C GIL H C +LC
Sbjct: 364 SAGEASC*CSGILLSHSCCATLC 432
Score = 39.1 bits (79), Expect(6) = 2e-049
Identities = 16/22 (72%), Positives = 17/22 (77%)
Frame = +2 / +2
Query: 620 PCDLDRGAALC*AIVAFCSAGE 685
PCDLDRGA LC AIVAF G+
Sbjct: 311 PCDLDRGATLCRAIVAFQVQGK 376
Score = 38.2 bits (77), Expect(5) = 5e-048
Identities = 14/21 (66%), Positives = 17/21 (80%)
Frame = -1 / -2
Query: 681 PALQNATIAQHKAAPLSKSHG 619
P NAT+A+H+ APLSKSHG
Sbjct: 372 PCTWNATMARHRVAPLSKSHG 310
Score = 37.3 bits (75), Expect(5) = 5e-048
Identities = 16/37 (43%), Positives = 24/37 (64%)
Frame = -2 / -1
Query: 1025 WSERCVLSL*RKMLYITVINEFNQ*CTSSIDVSILDQ 915
WS+ C + ++ TV+NEFN TS +DV+ILD+
Sbjct: 556 WSKLCAPFIT*DVIQRTVVNEFNHSHTSRVDVNILDK 446
Score = 35.0 bits (70), Expect(5) = 2e-056
Identities = 14/19 (73%), Positives = 15/19 (78%)
Frame = -3 / -2
Query: 730 AQLVWE*YPWASTRCFPCT 674
A V +*YP ASTRCFPCT
Sbjct: 420 ATRVRQ*YPRASTRCFPCT 364
Score = 33.6 bits (67), Expect(6) = 2e-049
Identities = 14/19 (73%), Positives = 14/19 (73%)
Frame = +3 / +2
Query: 675 VQGKHRVDAQGYYSHTSCA 731
VQGKHRVDA GYY T A
Sbjct: 365 VQGKHRVDALGYYCLTLVA 421
Score = 33.1 bits (66), Expect(5) = 5e-048
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = -1 / -3
Query: 714 NNIPGHQHDASPAL 673
N+IP HQHDASPAL
Sbjct: 404 NSIPEHQHDASPAL 363
Score = 32.7 bits (65), Expect(4) = 7e-024
Identities = 16/34 (47%), Positives = 21/34 (61%)
Frame = -1 / -3
Query: 1026 LVRALCALFVT*DVIHHSYKRI*SIMHLKHRR*H 925
LV+ +C+L+ HS KRI*S+ HL R*H
Sbjct: 557 LVKVVCSLYNVRCYTAHSCKRI*SLTHLTR*R*H 456
Score = 32.2 bits (64), Expect(4) = 7e-024
Identities = 12/16 (75%), Positives = 14/16 (87%)
Frame = -2 / -3
Query: 668 MPQ*LSTKLLLYPNHM 621
MP+ L T+LLLYPNHM
Sbjct: 359 MPRWLGTELLLYPNHM 312
Score = 30.9 bits (61), Expect(6) = 2e-049
Identities = 13/15 (86%), Positives = 13/15 (86%)
Frame = +3 / +1
Query: 975 CDV*HLTLQREHTTL 1019
C V*HLTL REHTTL
Sbjct: 508 CAV*HLTL*REHTTL 552
Score = 29.0 bits (57), Expect(6) = 2e-049
Identities = 15/20 (75%), Positives = 15/20 (75%)
Frame = +1 / +3
Query: 919 SKMLTSMLEVHY*LNSFITV 978
SKMLTS EV *LNSF TV
Sbjct: 450 SKMLTSTREVCE*LNSFTTV 509
Score = 27.2 bits (53), Expect(5) = 1e-030
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = +2 / +3
Query: 980 CITSYVTKRAHN 1015
CITSYV K AHN
Sbjct: 513 CITSYVIKGAHN 548
Score = 26.7 bits (52), Expect(4) = 7e-024
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = -2 / -1
Query: 713 IISLGINTMLPLH 675
I+S INTMLPLH
Sbjct: 403 IVSQSINTMLPLH 365
Score = 23.5 bits (45), Expect(5) = 1e-030
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +1 / +1
Query: 616 LAM*FG*RSSFVLSYCGI 669
L M*FG*RS+ V S+ GI
Sbjct: 307 LTM*FG*RSNSVPSHRGI 360
Score = 23.1 bits (44), Expect(5) = 1e-030
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = +1 / +3
Query: 676 CRGSIVLMPRDII 714
CRGSIVLM D I
Sbjct: 366 CRGSIVLMLWDTI 404
>gb|CW438004.1|CW438004 fsbb001f155g11f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f155g11, DNA
sequence
Length = 766
Score = 115 bits (246), Expect(7) = 2e-058
Identities = 48/56 (85%), Positives = 49/56 (87%)
Frame = -2 / -3
Query: 506 CFTSRHSI*TNVLAFPWHGLQ*CNHLRHGHPS*NNYFCRNQKNE*YIDLSILASNN 339
C TSRHSI*TN LAFP H LQ*CNHLRHGH S*NNYFCRNQKNE*Y +SILASNN
Sbjct: 218 CVTSRHSI*TNALAFPRHRLQ*CNHLRHGHSS*NNYFCRNQKNE*YNGISILASNN 51
Score = 114 bits (243), Expect(7) = 7e-052
Identities = 47/64 (73%), Positives = 53/64 (82%)
Frame = +2 / +2
Query: 338 HYCLLELINQYIIHSFGFCRNNCFRRDDHASGDCITGAHATEKPEHSSK*NDVM*NKPHA 517
+YCLL L IIHSFG CRNNCFRR+DHASGDCITGA+A EKPEHSSK*NDVM*+K
Sbjct: 50 NYCLLGLRCHCIIHSFGSCRNNCFRRNDHASGDCITGAYAAEKPEHSSK*NDVM*HKVTC 229
Query: 518 SRSK 529
++ K
Sbjct: 230 NKVK 241
Score = 111 bits (236), Expect(7) = 5e-059
Identities = 47/57 (82%), Positives = 50/57 (87%)
Frame = +1 / +1
Query: 340 LLLARIDKSIYYSFFWFLQK*LFQEG*PCLR*LHHWSPCHGKARTFV*IE*RDVKQA 510
LLLARI+ +YYSFFWFLQK*LFQE *PCLR*LHHWS C GKAR FV*IE*RDV Q+
Sbjct: 52 LLLARIEMPLYYSFFWFLQK*LFQEE*PCLR*LHHWSLCRGKARAFV*IE*RDVTQS 222
Score = 107 bits (229), Expect(5) = 1e-045
Identities = 47/56 (83%), Positives = 50/56 (89%)
Frame = -3 / -1
Query: 505 VLHHVILFRRMFWLFRGMGSSDAIT*GMVIPPETIISAETKRMNNILIYQF*QAIM 338
VLHHVILFRRM WLFRG+GSSDAIT*GMVIPPETIISA TKRMNN + Q *QAI+
Sbjct: 217 VLHHVILFRRMLWLFRGIGSSDAIT*GMVIPPETIISAGTKRMNNTMASQS*QAII 50
Score = 102 bits (217), Expect(4) = 3e-030
Identities = 46/56 (82%), Positives = 48/56 (85%)
Frame = -1 / -2
Query: 507 LFYITSFYLDECSGFSVAWAPVMQSPEAWSSLLKQLFLQKPKE*IIY*FINSSKQ* 340
L YITSFYLDECSGFS A APVMQSPEAWS LLKQLFLQ+PKE*II +N SKQ*
Sbjct: 219 LCYITSFYLDECSGFSAA*APVMQSPEAWSFLLKQLFLQEPKE*IIQWHLNPSKQ* 52
Score = 89.5 bits (189), Expect(6) = 5e-032
Identities = 42/56 (75%), Positives = 43/56 (76%)
Frame = +3 / +3
Query: 339 IIAC*XXXXXXXXXXXVSAEIIVSGGMTMPQVIASLEPMPRKSQNIRLNRMT*CKT 506
IIAC* V AEIIVSGGMTMPQVIASLEPMPRKSQ+IRLNRMT*C T
Sbjct: 51 IIAC*D*DAIVLFILLVPAEIIVSGGMTMPQVIASLEPMPRKSQSIRLNRMT*CNT 218
Score = 52.4 bits (108), Expect(7) = 2e-058
Identities = 20/21 (95%), Positives = 20/21 (95%)
Frame = -1 / -3
Query: 612 HRSCYLLDAQPNISKHAKQTS 550
HRSCYLLDAQPNISKHAK TS
Sbjct: 326 HRSCYLLDAQPNISKHAKHTS 264
Score = 50.1 bits (103), Expect(7) = 5e-059
Identities = 18/21 (85%), Positives = 18/21 (85%)
Frame = +3 / +2
Query: 549 SWFVLHVY*YWVVHQADSMTC 611
SW V HVY*YW VHQADSMTC
Sbjct: 263 SWCVWHVY*YWAVHQADSMTC 325
Score = 49.6 bits (102), Expect(7) = 7e-052
Identities = 20/21 (95%), Positives = 20/21 (95%)
Frame = +2 / +1
Query: 548 QLVCFACLLILGCASSR*HDL 610
QLVC ACLLILGCASSR*HDL
Sbjct: 262 QLVCLACLLILGCASSR*HDL 324
Score = 48.3 bits (99), Expect(5) = 1e-045
Identities = 18/21 (85%), Positives = 19/21 (90%)
Frame = -2 / -1
Query: 611 TGHAICLMHNPISVNMQNKPA 549
TGHAICLMH+PISVNM N PA
Sbjct: 325 TGHAICLMHSPISVNMPNTPA 263
Score = 47.3 bits (97), Expect(7) = 2e-058
Identities = 22/38 (57%), Positives = 25/38 (65%)
Frame = -3 / -1
Query: 1027 SGQSVVCSLCNVRCYTSQL*TNLINNAPQA*TLAFWTS 914
SGQS V L Y++QL*TNLI + P A TL FWTS
Sbjct: 607 SGQSCVLPL*RKMLYSAQL*TNLITHTPHALTLTFWTS 494
Score = 45.5 bits (93), Expect(6) = 5e-032
Identities = 19/21 (90%), Positives = 20/21 (95%)
Frame = +1 / +3
Query: 550 AGLFCMFTDIGLCIKQIA*PV 612
AG+F MFTDIGLCIKQIA*PV
Sbjct: 264 AGVFGMFTDIGLCIKQIA*PV 326
Score = 44.6 bits (91), Expect(7) = 5e-059
Identities = 21/40 (52%), Positives = 27/40 (67%)
Frame = +3 / +3
Query: 909 LTLVQNANVYA*GALLIKFVYNCDV*HLTLQREHTTL*PE 1028
L LVQN NV A*G +IKFVYNC + ++ + T L*P+
Sbjct: 489 LVLVQNVNVNA*GV*VIKFVYNCALYNILRYKGSTQL*PD 608
Score = 44.1 bits (90), Expect(7) = 5e-059
Identities = 16/21 (76%), Positives = 17/21 (80%)
Frame = +3 / +1
Query: 621 HVIWIEEQLCAELLWHSVVQG 683
HVIWIEEQLCAE WHS +G
Sbjct: 361 HVIWIEEQLCAEPSWHSKCRG 423
Score = 43.7 bits (89), Expect(7) = 2e-058
Identities = 16/21 (76%), Positives = 17/21 (80%)
Frame = -3 / -3
Query: 682 PCTTECHNSSAQSCSSIQITW 620
P ECH+ SAQSCSSIQITW
Sbjct: 422 PLHLECHDGSAQSCSSIQITW 360
Score = 42.3 bits (86), Expect(7) = 5e-059
Identities = 16/23 (69%), Positives = 17/23 (73%)
Frame = +2 / +2
Query: 674 SAGEASC*CPGILFPHKLCYSLC 742
SAGEASC*C GIL H C +LC
Sbjct: 413 SAGEASC*CSGILLSHSCCATLC 481
Score = 39.1 bits (79), Expect(7) = 7e-052
Identities = 16/22 (72%), Positives = 17/22 (77%)
Frame = +2 / +3
Query: 620 PCDLDRGAALC*AIVAFCSAGE 685
PCDLDRGA LC AIVAF G+
Sbjct: 360 PCDLDRGATLCRAIVAFQVQGK 425
Score = 38.2 bits (77), Expect(5) = 1e-045
Identities = 14/21 (66%), Positives = 17/21 (80%)
Frame = -1 / -1
Query: 681 PALQNATIAQHKAAPLSKSHG 619
P NAT+A+H+ APLSKSHG
Sbjct: 421 PCTWNATMARHRVAPLSKSHG 359
Score = 37.3 bits (75), Expect(5) = 1e-045
Identities = 16/37 (43%), Positives = 24/37 (64%)
Frame = -2 / -3
Query: 1025 WSERCVLSL*RKMLYITVINEFNQ*CTSSIDVSILDQ 915
WS+ C + ++ TV+NEFN TS +DV+ILD+
Sbjct: 605 WSKLCAPFIT*DVIQRTVVNEFNHSHTSRVDVNILDK 495
Score = 35.0 bits (70), Expect(7) = 2e-058
Identities = 14/19 (73%), Positives = 15/19 (78%)
Frame = -3 / -1
Query: 730 AQLVWE*YPWASTRCFPCT 674
A V +*YP ASTRCFPCT
Sbjct: 469 ATRVRQ*YPRASTRCFPCT 413
Score = 33.6 bits (67), Expect(7) = 7e-052
Identities = 14/19 (73%), Positives = 14/19 (73%)
Frame = +3 / +3
Query: 675 VQGKHRVDAQGYYSHTSCA 731
VQGKHRVDA GYY T A
Sbjct: 414 VQGKHRVDALGYYCLTLVA 470
Score = 33.1 bits (66), Expect(5) = 1e-045
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = -1 / -2
Query: 714 NNIPGHQHDASPAL 673
N+IP HQHDASPAL
Sbjct: 453 NSIPEHQHDASPAL 412
Score = 32.7 bits (65), Expect(4) = 3e-030
Identities = 16/34 (47%), Positives = 21/34 (61%)
Frame = -1 / -2
Query: 1026 LVRALCALFVT*DVIHHSYKRI*SIMHLKHRR*H 925
LV+ +C+L+ HS KRI*S+ HL R*H
Sbjct: 606 LVKVVCSLYNVRCYTAHSCKRI*SLTHLTR*R*H 505
Score = 32.2 bits (64), Expect(4) = 3e-030
Identities = 12/16 (75%), Positives = 14/16 (87%)
Frame = -2 / -2
Query: 668 MPQ*LSTKLLLYPNHM 621
MP+ L T+LLLYPNHM
Sbjct: 408 MPRWLGTELLLYPNHM 361
Score = 30.9 bits (61), Expect(7) = 7e-052
Identities = 13/15 (86%), Positives = 13/15 (86%)
Frame = +3 / +2
Query: 975 CDV*HLTLQREHTTL 1019
C V*HLTL REHTTL
Sbjct: 557 CAV*HLTL*REHTTL 601
Score = 29.0 bits (57), Expect(7) = 7e-052
Identities = 15/20 (75%), Positives = 15/20 (75%)
Frame = +1 / +1
Query: 919 SKMLTSMLEVHY*LNSFITV 978
SKMLTS EV *LNSF TV
Sbjct: 499 SKMLTSTREVCE*LNSFTTV 558
Score = 29.0 bits (57), Expect(7) = 5e-059
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +1 / +2
Query: 505 QATCIKVKVSNLYN 546
+ TC KVKVSNLYN
Sbjct: 218 KVTCNKVKVSNLYN 259
Score = 27.2 bits (53), Expect(6) = 5e-032
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = +2 / +1
Query: 980 CITSYVTKRAHN 1015
CITSYV K AHN
Sbjct: 562 CITSYVIKGAHN 597
Score = 26.7 bits (52), Expect(4) = 3e-030
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = -2 / -3
Query: 713 IISLGINTMLPLH 675
I+S INTMLPLH
Sbjct: 452 IVSQSINTMLPLH 414
Score = 25.8 bits (50), Expect(7) = 2e-058
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = -2 / -2
Query: 545 LYKLETLTLMHV 510
LY+LET TL+HV
Sbjct: 258 LYRLETFTLLHV 223
Score = 24.9 bits (48), Expect(6) = 5e-032
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +3 / +1
Query: 507 SHMHQGQSFQLI*P 548
SHM QG+SFQ I P
Sbjct: 220 SHMQQGKSFQPIQP 261
Score = 23.5 bits (45), Expect(6) = 5e-032
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +1 / +2
Query: 616 LAM*FG*RSSFVLSYCGI 669
L M*FG*RS+ V S+ GI
Sbjct: 356 LTM*FG*RSNSVPSHRGI 409
Score = 23.1 bits (44), Expect(6) = 5e-032
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = +1 / +1
Query: 676 CRGSIVLMPRDII 714
CRGSIVLM D I
Sbjct: 415 CRGSIVLMLWDTI 453
Score = 22.1 bits (42), Expect(7) = 7e-052
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +2 / +1
Query: 287 FPI*SILHYK 316
F I*SILHYK
Sbjct: 7 FAI*SILHYK 36
Score = 22.1 bits (42), Expect(7) = 5e-059
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +3 / +2
Query: 285 FFLSSQFCITKNSRIH 332
F SSQFCIT + ++
Sbjct: 5 FLPSSQFCITNTNPLN 52
Score = 21.7 bits (41), Expect(7) = 2e-058
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = -2 / -1
Query: 314 CNAKLTR*EK 285
CNAKLTR +K
Sbjct: 34 CNAKLTRWQK 5
>gb|CW070747.1|CW070747 104_322_10590981_116_30543 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10590981, DNA
sequence
Length = 656
Score = 119 bits (254), Expect(4) = 1e-042
Identities = 50/60 (83%), Positives = 53/60 (88%)
Frame = +1 / +3
Query: 61 VVLQTDKGDEELCSVYVPTNHLYIGDIFLVNSXXXXRPNLSIREGIGMVVWLI*CLASLY 240
++LQTDKGDEELCSVYVPTNHLYIGDIFLVNS RPNLSIREGIGMVV +*CLA LY
Sbjct: 387 LLLQTDKGDEELCSVYVPTNHLYIGDIFLVNSEEIIRPNLSIREGIGMVVLFL*CLAFLY 566
Score = 113 bits (242), Expect(4) = 2e-041
Identities = 47/56 (83%), Positives = 50/56 (89%)
Frame = -2 / -2
Query: 239 YRDARHHINQTTIPIPSRIDKLGLXXXXEFTRNISPMYR*FVGTYTLHSSSSPLSV 72
YR ARHH N+TTIPIPSR+DKLGL EFTRN+SPMYR*FVGTYTLHSSSSPLSV
Sbjct: 565 YRKARHHRNKTTIPIPSRMDKLGLIISSEFTRNMSPMYR*FVGTYTLHSSSSPLSV 398
Score = 97.3 bits (206), Expect(3) = 1e-031
Identities = 44/56 (78%), Positives = 45/56 (80%)
Frame = -3 / -3
Query: 238 IEMLGIILTKLPYRFLLE*IN*VLXXXXSSPEIYHRCTDDLLAHTHYTVLRRLCQS 71
IE LGII TKLPY+FL E IN*VL SSPEI HRC DDLLAHTHYTVL RLCQS
Sbjct: 564 IERLGIIGTKLPYQFLPEWIN*VL*SPQSSPEICHRCIDDLLAHTHYTVLHRLCQS 397
Score = 96.4 bits (204), Expect(4) = 2e-034
Identities = 43/59 (72%), Positives = 45/59 (76%)
Frame = +2 / +1
Query: 71 RLTKATKNCVVCMCQQIICTSVIYFW*TXXXX*DLIYLFEKESVW*FG*YDA*HLYIIM 247
RLTKA KNCVVCMCQQII TSV YFW*T *DLIY F KE VW*F YDA* YI++
Sbjct: 397 RLTKAMKNCVVCMCQQIIYTSVTYFW*TLRRL*DLIYPFGKELVW*FCSYDA*PFYILL 573
Score = 93.6 bits (198), Expect(3) = 2e-030
Identities = 41/58 (70%), Positives = 46/58 (79%)
Frame = -1 / -1
Query: 240 I*RC*ASY*PNYHTDSFSNR*IRSXXXXXVHQKYITDVQMICWHIHTTQFFVAFVSLK 67
I*+ *AS NYHT+SF N *IRS VHQKY+TDV MICWHIHTTQFF+AFVSL+
Sbjct: 566 I*KG*AS*EQNYHTNSFPNG*IRSYNLLRVHQKYVTDV*MICWHIHTTQFFIAFVSLQ 393
Score = 65.2 bits (136), Expect(4) = 2e-041
Identities = 23/23 (100%), Positives = 23/23 (100%)
Frame = -1 / -1
Query: 72 LKDHR*CYESKCIFTNSWMTNYC 4
LKDHR*CYESKCIFTNSWMTNYC
Sbjct: 155 LKDHR*CYESKCIFTNSWMTNYC 87
Score = 57.4 bits (119), Expect(4) = 1e-042
Identities = 23/23 (100%), Positives = 23/23 (100%)
Frame = +2 / +1
Query: 5 Q*FVIHELVNMHLDS*HQRWSFR 73
Q*FVIHELVNMHLDS*HQRWSFR
Sbjct: 88 Q*FVIHELVNMHLDS*HQRWSFR 156
Score = 56.1 bits (116), Expect(4) = 2e-034
Identities = 23/23 (100%), Positives = 23/23 (100%)
Frame = +1 / +3
Query: 4 AIIRHPRIGEYAFGFITSTVVLQ 72
AIIRHPRIGEYAFGFITSTVVLQ
Sbjct: 87 AIIRHPRIGEYAFGFITSTVVLQ 155
Score = 54.7 bits (113), Expect(3) = 2e-030
Identities = 22/22 (100%), Positives = 22/22 (100%)
Frame = -3 / -3
Query: 70 EGPPLML*IQMHIHQFVDDELL 5
EGPPLML*IQMHIHQFVDDELL
Sbjct: 153 EGPPLML*IQMHIHQFVDDELL 88
Score = 54.7 bits (113), Expect(3) = 1e-031
Identities = 24/25 (96%), Positives = 24/25 (96%)
Frame = -2 / -2
Query: 77 SV*RTTVDVMNPNAYSPIRG*RIIA 3
S *RTTVDVMNPNAYSPIRG*RIIA
Sbjct: 160 ST*RTTVDVMNPNAYSPIRG*RIIA 86
Score = 36.8 bits (74), Expect(4) = 1e-042
Identities = 14/18 (77%), Positives = 15/18 (83%)
Frame = +1 / +2
Query: 232 SLYYYAMWQLSLKFLLLV 285
S+YYYAMWQLSL F LV
Sbjct: 560 SIYYYAMWQLSLNFCHLV 613
Score = 33.1 bits (66), Expect(4) = 2e-034
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +2 / +3
Query: 233 LYIIMPCGNFP* 268
LYIIMPCGNFP*
Sbjct: 561 LYIIMPCGNFP* 596
Score = 31.3 bits (62), Expect(4) = 2e-041
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = -3 / -1
Query: 268 SRKVATWHNNI 236
SRKVATWHNNI
Sbjct: 596 SRKVATWHNNI 564
Score = 28.6 bits (56), Expect(3) = 1e-031
Identities = 11/13 (84%), Positives = 12/13 (92%)
Frame = -2 / -3
Query: 275 KNFKESCHMA**Y 237
+ FKESCHMA**Y
Sbjct: 603 QKFKESCHMA**Y 565
Score = 28.1 bits (55), Expect(3) = 2e-030
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = -1 / -2
Query: 273 EFQGKLPHGIII*R 232
+ QGKLPHGIII R
Sbjct: 601 KIQGKLPHGIIIYR 560
Score = 22.6 bits (43), Expect(4) = 2e-034
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +1 / +2
Query: 274 LLLVFSYLVNFALQ 315
L L F +LVNFALQ
Sbjct: 587 LSLNFCHLVNFALQ 628
Score = 22.1 bits (42), Expect(4) = 1e-042
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +3 / +1
Query: 285 FFLSSQFCITKNSRIH 332
F SSQFCIT + ++
Sbjct: 598 FLPSSQFCITNTNPLN 645
Score = 21.7 bits (41), Expect(4) = 2e-041
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = -2 / -3
Query: 314 CNAKLTR*EK 285
CNAKLTR +K
Sbjct: 627 CNAKLTRWQK 598
>gb|CW161271.1|CW161271 104_568_11150325_148_36430_093 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11150325, DNA
sequence
Length = 746
Score = 59.3 bits (123), Expect(6) = 1e-040
Identities = 23/25 (92%), Positives = 24/25 (96%)
Frame = -3 / -3
Query: 505 VLHHVILFRRMFWLFRGMGSSDAIT 431
VLHHVILFRRM WLFRG+GSSDAIT
Sbjct: 75 VLHHVILFRRMLWLFRGIGSSDAIT 1
Score = 57.9 bits (120), Expect(6) = 6e-034
Identities = 24/33 (72%), Positives = 28/33 (84%)
Frame = +2 / +1
Query: 431 GDCITGAHATEKPEHSSK*NDVM*NKPHASRSK 529
GDCITGA+A EKPEHSSK*NDVM*+K ++ K
Sbjct: 1 GDCITGAYAAEKPEHSSK*NDVM*HKVTCNKVK 99
Score = 54.7 bits (113), Expect(6) = 5e-041
Identities = 23/25 (92%), Positives = 24/25 (96%)
Frame = +3 / +2
Query: 432 VIASLEPMPRKSQNIRLNRMT*CKT 506
VIASLEPMPRKSQ+IRLNRMT*C T
Sbjct: 2 VIASLEPMPRKSQSIRLNRMT*CNT 76
Score = 52.4 bits (108), Expect(5) = 1e-029
Identities = 22/25 (88%), Positives = 22/25 (88%)
Frame = -1 / -1
Query: 507 LFYITSFYLDECSGFSVAWAPVMQS 433
L YITSFYLDECSGFS A APVMQS
Sbjct: 77 LCYITSFYLDECSGFSAA*APVMQS 3
Score = 52.4 bits (108), Expect(6) = 1e-040
Identities = 20/21 (95%), Positives = 20/21 (95%)
Frame = -1 / -2
Query: 612 HRSCYLLDAQPNISKHAKQTS 550
HRSCYLLDAQPNISKHAK TS
Sbjct: 184 HRSCYLLDAQPNISKHAKHTS 122
Score = 50.1 bits (103), Expect(6) = 5e-041
Identities = 18/21 (85%), Positives = 18/21 (85%)
Frame = +3 / +1
Query: 549 SWFVLHVY*YWVVHQADSMTC 611
SW V HVY*YW VHQADSMTC
Sbjct: 121 SWCVWHVY*YWAVHQADSMTC 183
Score = 50.1 bits (103), Expect(6) = 7e-021
Identities = 21/26 (80%), Positives = 22/26 (84%)
Frame = +1 / +3
Query: 433 *LHHWSPCHGKARTFV*IE*RDVKQA 510
*LHHWS C GKAR FV*IE*RDV Q+
Sbjct: 3 *LHHWSLCRGKARAFV*IE*RDVTQS 80
Score = 49.6 bits (102), Expect(6) = 6e-034
Identities = 20/21 (95%), Positives = 20/21 (95%)
Frame = +2 / +3
Query: 548 QLVCFACLLILGCASSR*HDL 610
QLVC ACLLILGCASSR*HDL
Sbjct: 120 QLVCLACLLILGCASSR*HDL 182
Score = 48.3 bits (99), Expect(5) = 1e-029
Identities = 18/21 (85%), Positives = 19/21 (90%)
Frame = -2 / -3
Query: 611 TGHAICLMHNPISVNMQNKPA 549
TGHAICLMH+PISVNM N PA
Sbjct: 183 TGHAICLMHSPISVNMPNTPA 121
Score = 47.3 bits (97), Expect(6) = 1e-040
Identities = 22/38 (57%), Positives = 25/38 (65%)
Frame = -3 / -3
Query: 1027 SGQSVVCSLCNVRCYTSQL*TNLINNAPQA*TLAFWTS 914
SGQS V L Y++QL*TNLI + P A TL FWTS
Sbjct: 465 SGQSCVLPL*RKMLYSAQL*TNLITHTPHALTLTFWTS 352
Score = 45.5 bits (93), Expect(6) = 7e-021
Identities = 19/21 (90%), Positives = 20/21 (95%)
Frame = +1 / +2
Query: 550 AGLFCMFTDIGLCIKQIA*PV 612
AG+F MFTDIGLCIKQIA*PV
Sbjct: 122 AGVFGMFTDIGLCIKQIA*PV 184
Score = 44.6 bits (91), Expect(6) = 5e-041
Identities = 21/40 (52%), Positives = 27/40 (67%)
Frame = +3 / +2
Query: 909 LTLVQNANVYA*GALLIKFVYNCDV*HLTLQREHTTL*PE 1028
L LVQN NV A*G +IKFVYNC + ++ + T L*P+
Sbjct: 347 LVLVQNVNVNA*GV*VIKFVYNCALYNILRYKGSTQL*PD 466
Score = 44.1 bits (90), Expect(6) = 5e-041
Identities = 16/21 (76%), Positives = 17/21 (80%)
Frame = +3 / +3
Query: 621 HVIWIEEQLCAELLWHSVVQG 683
HVIWIEEQLCAE WHS +G
Sbjct: 219 HVIWIEEQLCAEPSWHSKCRG 281
Score = 43.7 bits (89), Expect(6) = 1e-040
Identities = 16/21 (76%), Positives = 17/21 (80%)
Frame = -3 / -2
Query: 682 PCTTECHNSSAQSCSSIQITW 620
P ECH+ SAQSCSSIQITW
Sbjct: 280 PLHLECHDGSAQSCSSIQITW 218
Score = 42.3 bits (86), Expect(6) = 5e-041
Identities = 16/23 (69%), Positives = 17/23 (73%)
Frame = +2 / +1
Query: 674 SAGEASC*CPGILFPHKLCYSLC 742
SAGEASC*C GIL H C +LC
Sbjct: 271 SAGEASC*CSGILLSHSCCATLC 339
Score = 39.1 bits (79), Expect(6) = 6e-034
Identities = 16/22 (72%), Positives = 17/22 (77%)
Frame = +2 / +2
Query: 620 PCDLDRGAALC*AIVAFCSAGE 685
PCDLDRGA LC AIVAF G+
Sbjct: 218 PCDLDRGATLCRAIVAFQVQGK 283
Score = 38.2 bits (77), Expect(5) = 1e-029
Identities = 14/21 (66%), Positives = 17/21 (80%)
Frame = -1 / -3
Query: 681 PALQNATIAQHKAAPLSKSHG 619
P NAT+A+H+ APLSKSHG
Sbjct: 279 PCTWNATMARHRVAPLSKSHG 217
Score = 37.3 bits (75), Expect(5) = 1e-029
Identities = 16/37 (43%), Positives = 24/37 (64%)
Frame = -2 / -2
Query: 1025 WSERCVLSL*RKMLYITVINEFNQ*CTSSIDVSILDQ 915
WS+ C + ++ TV+NEFN TS +DV+ILD+
Sbjct: 463 WSKLCAPFIT*DVIQRTVVNEFNHSHTSRVDVNILDK 353
Score = 35.0 bits (70), Expect(6) = 1e-040
Identities = 14/19 (73%), Positives = 15/19 (78%)
Frame = -3 / -3
Query: 730 AQLVWE*YPWASTRCFPCT 674
A V +*YP ASTRCFPCT
Sbjct: 327 ATRVRQ*YPRASTRCFPCT 271
Score = 33.6 bits (67), Expect(6) = 6e-034
Identities = 14/19 (73%), Positives = 14/19 (73%)
Frame = +3 / +2
Query: 675 VQGKHRVDAQGYYSHTSCA 731
VQGKHRVDA GYY T A
Sbjct: 272 VQGKHRVDALGYYCLTLVA 328
Score = 33.1 bits (66), Expect(5) = 1e-029
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = -1 / -1
Query: 714 NNIPGHQHDASPAL 673
N+IP HQHDASPAL
Sbjct: 311 NSIPEHQHDASPAL 270
Score = 30.9 bits (61), Expect(6) = 6e-034
Identities = 13/15 (86%), Positives = 13/15 (86%)
Frame = +3 / +1
Query: 975 CDV*HLTLQREHTTL 1019
C V*HLTL REHTTL
Sbjct: 415 CAV*HLTL*REHTTL 459
Score = 29.0 bits (57), Expect(6) = 6e-034
Identities = 15/20 (75%), Positives = 15/20 (75%)
Frame = +1 / +3
Query: 919 SKMLTSMLEVHY*LNSFITV 978
SKMLTS EV *LNSF TV
Sbjct: 357 SKMLTSTREVCE*LNSFTTV 416
Score = 29.0 bits (57), Expect(6) = 5e-041
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +1 / +1
Query: 505 QATCIKVKVSNLYN 546
+ TC KVKVSNLYN
Sbjct: 76 KVTCNKVKVSNLYN 117
Score = 27.2 bits (53), Expect(6) = 7e-021
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = +2 / +3
Query: 980 CITSYVTKRAHN 1015
CITSYV K AHN
Sbjct: 420 CITSYVIKGAHN 455
Score = 25.8 bits (50), Expect(6) = 1e-040
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = -2 / -1
Query: 545 LYKLETLTLMHV 510
LY+LET TL+HV
Sbjct: 116 LYRLETFTLLHV 81
Score = 24.9 bits (48), Expect(6) = 7e-021
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +3 / +3
Query: 507 SHMHQGQSFQLI*P 548
SHM QG+SFQ I P
Sbjct: 78 SHMQQGKSFQPIQP 119
Score = 23.5 bits (45), Expect(6) = 7e-021
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +1 / +1
Query: 616 LAM*FG*RSSFVLSYCGI 669
L M*FG*RS+ V S+ GI
Sbjct: 214 LTM*FG*RSNSVPSHRGI 267
Score = 23.1 bits (44), Expect(6) = 7e-021
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = +1 / +3
Query: 676 CRGSIVLMPRDII 714
CRGSIVLM D I
Sbjct: 273 CRGSIVLMLWDTI 311
>gb|BG101804.1|BG101804 RHIZ2_22_F05.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 290
Score = 102 bits (217), Expect(2) = 2e-034
Identities = 42/49 (85%), Positives = 44/49 (89%)
Frame = +1 / +3
Query: 64 VLQTDKGDEELCSVYVPTNHLYIGDIFLVNSXXXXRPNLSIREGIGMVV 210
VLQTDKGDEELCSVYVPTNHLYIGDIFLVNS RPNLSIREGI ++V
Sbjct: 3 VLQTDKGDEELCSVYVPTNHLYIGDIFLVNSAEIIRPNLSIREGIEIIV 149
Score = 77.1 bits (162), Expect(2) = 1e-025
Identities = 33/50 (66%), Positives = 41/50 (82%)
Frame = -2 / -2
Query: 212 QTTIPIPSRIDKLGLXXXXEFTRNISPMYR*FVGTYTLHSSSSPLSV*RT 63
+T I +PSR+DKLGL EFT+ +SP+Y+* VGT TLH+SSSPLSV*RT
Sbjct: 151 ETIISMPSRMDKLGLIISAEFTKKMSPIYK*LVGT*TLHNSSSPLSV*RT 2
Score = 66.6 bits (139), Expect(2) = 2e-034
Identities = 28/32 (87%), Positives = 30/32 (93%)
Frame = +3 / +3
Query: 396 EIIVSGGMTMPQVIASLEPMPRKSQNIRLNRM 491
EIIVSGGMTMPQVI SLEP PRKSQNIRL+R+
Sbjct: 138 EIIVSGGMTMPQVITSLEPTPRKSQNIRLDRV 233
Score = 62.5 bits (130), Expect(2) = 1e-025
Identities = 25/35 (71%), Positives = 30/35 (85%)
Frame = -3 / -2
Query: 487 LFRRMFWLFRGMGSSDAIT*GMVIPPETIISAETK 383
L +RMFWLFRG+GSSD IT G+VIPPETIIS ++
Sbjct: 229 LSKRMFWLFRGVGSSDVITCGIVIPPETIISMPSR 125
>gb|CF488456.1|CF488456 POL1_50_C12.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_50_C12_A002 3', mRNA sequence
Length = 564
Score = 121 bits (259), Expect(2) = 5e-031
Identities = 50/68 (73%), Positives = 57/68 (83%)
Frame = +1 / +1
Query: 7 IIRHPRIGEYAFGFITSTVVLQTDKGDEELCSVYVPTNHLYIGDIFLVNSXXXXRPNLSI 186
IIRHPR+GEYAFGFITS+V LQ+ G E+L VYVPTNHLYIGDIF+VNS RPNLS+
Sbjct: 61 IIRHPRVGEYAFGFITSSVSLQSYSGQEDLYCVYVPTNHLYIGDIFMVNSKDVIRPNLSV 240
Query: 187 REGIGMVV 210
REGI +VV
Sbjct: 241 REGIEIVV 264
Score = 37.3 bits (75), Expect(2) = 5e-031
Identities = 12/19 (63%), Positives = 19/19 (100%)
Frame = +3 / +1
Query: 396 EIIVSGGMTMPQVIASLEP 452
EI+VSGGM+MPQ++++L+P
Sbjct: 253 EIVVSGGMSMPQILSTLDP 309
>gb|CN145002.1|CN145002 WOUND1_26_E07.b2_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_26_E07_A002 3', mRNA sequence
Length = 794
Score = 121 bits (259), Expect(2) = 7e-031
Identities = 50/68 (73%), Positives = 57/68 (83%)
Frame = +1 / +1
Query: 7 IIRHPRIGEYAFGFITSTVVLQTDKGDEELCSVYVPTNHLYIGDIFLVNSXXXXRPNLSI 186
IIRHPR+GEYAFGFITS+V LQ+ G E+L VYVPTNHLYIGDIF+VNS RPNLS+
Sbjct: 286 IIRHPRVGEYAFGFITSSVSLQSYSGQEDLYCVYVPTNHLYIGDIFMVNSKDVIRPNLSV 465
Query: 187 REGIGMVV 210
REGI +VV
Sbjct: 466 REGIEIVV 489
Score = 37.3 bits (75), Expect(2) = 7e-031
Identities = 12/19 (63%), Positives = 19/19 (100%)
Frame = +3 / +1
Query: 396 EIIVSGGMTMPQVIASLEP 452
EI+VSGGM+MPQ++++L+P
Sbjct: 478 EIVVSGGMSMPQILSTLDP 534
>gb|CX608003.1|CX608003 ANR1_32_C02.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_32_C02_A002 3', mRNA sequence
Length = 760
Score = 119 bits (255), Expect(2) = 1e-030
Identities = 50/80 (62%), Positives = 60/80 (75%)
Frame = +1 / +2
Query: 7 IIRHPRIGEYAFGFITSTVVLQTDKGDEELCSVYVPTNHLYIGDIFLVNSXXXXRPNLSI 186
IIRHPRIGEYAFGFITS V+LQ +E++ VYVPTNHLYIGDIFLV+S RPN+S+
Sbjct: 134 IIRHPRIGEYAFGFITSEVLLQGYSSEEKMYCVYVPTNHLYIGDIFLVSSSDVIRPNMSV 313
Query: 187 REGIGMVVWLI*CLASLYYY 246
REGIGM + ++ Y Y
Sbjct: 314 REGIGMHITVLFLFFPSYLY 373
Score = 38.2 bits (77), Expect(2) = 1e-030
Identities = 17/32 (53%), Positives = 21/32 (65%)
Frame = +3 / +1
Query: 393 AEIIVSGGMTMPQVIASLEPMPRKSQNIRLNR 488
AEI+VS G TMPQV++ LE P + IR R
Sbjct: 424 AEIVVSVGTTMPQVLSILETEPNQLNRIRSTR 519
>gb|CD227672.1|CD227672 CCC1_53_D08.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_53_D08_A007 3', mRNA sequence
Length = 655
Score = 116 bits (247), Expect = 8e-025
Identities = 48/68 (70%), Positives = 56/68 (82%)
Frame = +1 / +3
Query: 7 IIRHPRIGEYAFGFITSTVVLQTDKGDEELCSVYVPTNHLYIGDIFLVNSXXXXRPNLSI 186
IIRHPRIGEYAFGFITS V+LQ +E++ VYVPTNHLYIGDIFLV+S RPN+S+
Sbjct: 114 IIRHPRIGEYAFGFITSEVLLQGYSSEEKMYCVYVPTNHLYIGDIFLVSSSDVIRPNMSV 293
Query: 187 REGIGMVV 210
REGI +VV
Sbjct: 294 REGIEIVV 317
>gb|CX612583.1|CX612583 GABR1_3_F09.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_3_F09_A002 3', mRNA sequence
Length = 724
Score = 116 bits (247), Expect = 8e-025
Identities = 48/68 (70%), Positives = 56/68 (82%)
Frame = +1 / +3
Query: 7 IIRHPRIGEYAFGFITSTVVLQTDKGDEELCSVYVPTNHLYIGDIFLVNSXXXXRPNLSI 186
IIRHPRIGEYAFGFITS V+LQ +E++ VYVPTNHLYIGDIFLV+S RPN+S+
Sbjct: 246 IIRHPRIGEYAFGFITSEVLLQGYSSEEKMYCVYVPTNHLYIGDIFLVSSSDVIRPNMSV 425
Query: 187 REGIGMVV 210
REGI +VV
Sbjct: 426 REGIEIVV 449
>gb|BG159352.1|BG159352 OV2_6_F12.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA sequence
Length = 244
Score = 84.9 bits (179), Expect(3) = 3e-023
Identities = 35/37 (94%), Positives = 36/37 (97%)
Frame = -3 / -2
Query: 505 VLHHVILFRRMFWLFRGMGSSDAIT*GMVIPPETIIS 395
VLHHVILFRRM WLFRG+GSSDAIT*GMVIPPETIIS
Sbjct: 117 VLHHVILFRRMLWLFRGIGSSDAIT*GMVIPPETIIS 7
Score = 84.5 bits (178), Expect(2) = 3e-022
Identities = 33/37 (89%), Positives = 36/37 (97%)
Frame = +2 / +1
Query: 398 NNCFRRDDHASGDCITGAHATEKPEHSSK*NDVM*NK 508
NNCFRR+DHASGDCITGA+A EKPEHSSK*NDVM*+K
Sbjct: 10 NNCFRRNDHASGDCITGAYAAEKPEHSSK*NDVM*HK 120
Score = 42.3 bits (86), Expect(2) = 3e-022
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = +3 / +2
Query: 621 HVIWIEEQLCAELLWHS 671
HVIWIEEQLCAE WHS
Sbjct: 185 HVIWIEEQLCAEPSWHS 235
Score = 42.3 bits (86), Expect(3) = 3e-023
Identities = 15/17 (88%), Positives = 16/17 (94%)
Frame = -3 / -2
Query: 670 ECHNSSAQSCSSIQITW 620
ECH+ SAQSCSSIQITW
Sbjct: 234 ECHDGSAQSCSSIQITW 184
Score = 20.3 bits (38), Expect(3) = 3e-023
Identities = 6/7 (85%), Positives = 7/7 (100%)
Frame = -1 / -2
Query: 612 HRSCYLL 592
HRSCYL+
Sbjct: 150 HRSCYLV 130
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,275,708,624
Number of Sequences: 832831
Number of extensions: 18839122
Number of successful extensions: 93915
Number of sequences better than 1.0e-020: 15
length of database: 163,786,556
effective HSP length: 55
effective length of database: 117,980,851
effective search space used: 34332427641
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)