TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2419417.2.5
(733 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CW226825.1|CW226825 104_665_11205092_116_37226_080 Sorgh... 144 2e-062
gb|CW494468.1|CW494468 fsbb001f285m07k0 Sorghum methylation... 155 8e-057
gb|CW498861.1|CW498861 fsbb001f293f01k0 Sorghum methylation... 108 4e-054
gb|CW493895.1|CW493895 fsbb001f284o06f0 Sorghum methylation... 144 2e-052
gb|CW041974.1|CW041974 104_275_10506864_115_30285 Sorghum m... 144 2e-052
gb|BG053035.1|BG053035 RHIZ2_16_F06.g1_A003 Rhizome2 (RHIZ2... 185 6e-046
gb|CF431284.1|CF431284 NIT1_5_A06.b1_A002 Nitrogen-deficien... 185 6e-046
gb|CW437333.1|CW437333 fsbb001f154g12f0 Sorghum methylation... 136 7e-045
gb|CW421777.1|CW421777 fsbb001f130l22k0 Sorghum methylation... 136 3e-041
gb|CW389479.1|CW389479 fsbb001f074l04f0 Sorghum methylation... 144 4e-040
gb|CW437080.1|CW437080 fsbb001f154a08f0 Sorghum methylation... 135 9e-039
gb|CN123998.1|CN123998 RHOH1_2_A09.b1_A002 Acid- and alkali... 99 6e-038
gb|CN127628.1|CN127628 RHOH1_24_C12.b1_A002 Acid- and alkal... 99 6e-038
gb|BG049317.1|BG049317 OV1_18_D10.g1_A002 Ovary 1 (OV1) Sor... 99 6e-038
gb|BG932995.1|BG932995 DG1_69_H05.g1_A002 Dark Grown 1 (DG1... 99 3e-037
gb|BZ336705.1|BZ336705 hz38f05.g1 WGS-SbicolorF (JM107 adap... 79 6e-037
gb|CN129227.1|CN129227 RHOH1_34_E11.b3_A002 Acid- and alkal... 95 1e-036
gb|CW391208.1|CW391208 fsbb001f077d18f0 Sorghum methylation... 106 1e-034
gb|CD231994.1|CD231994 SS1_31_E11.b1_A012 Salt-stressed see... 99 2e-034
gb|CW299705.1|CW299705 104_782_11463260_148_35687_068 Sorgh... 106 4e-034
gb|CW373637.1|CW373637 fsbb001f050b24k0 Sorghum methylation... 144 2e-033
gb|CX621455.1|CX621455 GABR1_58_E10.b1_A002 GA- or brassino... 138 9e-032
gb|CW491525.1|CW491525 fsbb001f281g21f0 Sorghum methylation... 136 3e-031
gb|CW204789.1|CW204789 104_632_11186735_116_37060_082 Sorgh... 104 6e-029
gb|CD233911.1|CD233911 SS1_5_B11.b1_A012 Salt-stressed seed... 99 7e-027
gb|CW165207.1|CW165207 104_573_11152383_148_36473_056 Sorgh... 99 1e-026
gb|CW143523.1|CW143523 104_535_11137466_116_34955_009 Sorgh... 78 4e-026
gb|CW038580.1|CW038580 104_270_10505004_115_30386 Sorghum m... 97 6e-026
gb|CW458790.1|CW458790 fsbb001f205d22f0 Sorghum methylation... 97 6e-026
gb|CW029341.1|CW029341 104_256_10499619_114_30399 Sorghum m... 97 2e-025
gb|BM328168.1|BM328168 PIC1_21_H06.g1_A002 Pathogen-infecte... 76 6e-025
gb|CX609381.1|CX609381 ANR1_12_H02.b1_A002 Anaerobic roots ... 73 7e-024
gb|CN128906.1|CN128906 RHOH1_32_G07.b1_A002 Acid- and alkal... 73 7e-024
gb|CN128151.1|CN128151 RHOH1_27_H01.b1_A002 Acid- and alkal... 73 7e-024
gb|CL177642.1|CL177642 104_385_10893973_148_31913_037 Sorgh... 73 7e-024
gb|CF771891.1|CF771891 DSBF1_25_F02.g1_A010 Drought-stresse... 76 1e-023
gb|BI075756.1|BI075756 IP1_24_G09.g1_A002 Immature pannicle... 110 3e-023
gb|CW110613.1|CW110613 104_483_11103812_148_34522_072 Sorgh... 88 3e-023
gb|CN144836.1|CN144836 WOUND1_25_F02.b2_A002 Wounded leaves... 75 4e-023
gb|CX607339.1|CX607339 ANR1_8_B05.b1_A002 Anaerobic roots S... 73 6e-023
gb|BG158722.1|BG158722 RHIZ2_44_D05.g1_A003 Rhizome2 (RHIZ2... 73 8e-023
gb|BE596935.1|BE596935 PI1_60_D01.g1_A002 Pathogen induced ... 62 1e-022
gb|CX616694.1|CX616694 GABR1_29_H08.b1_A002 GA- or brassino... 73 1e-022
gb|CN151024.1|CN151024 WOUND1_73_B01.b1_A002 Wounded leaves... 80 2e-022
gb|CN143409.1|CN143409 WOUND1_16_C08.b1_A002 Wounded leaves... 73 2e-022
gb|CW143524.1|CW143524 104_535_11137466_148_34959_009 Sorgh... 106 3e-022
gb|AF253508.1|AF253508 Sorghum bicolor cyanogenic beta-gluc... 79 4e-022
gb|BG102626.1|BG102626 RHIZ2_35_C12.g1_A003 Rhizome2 (RHIZ2... 79 4e-022
gb|BG051974.1|BG051974 RHIZ2_7_C12.g1_A003 Rhizome2 (RHIZ2)... 79 4e-022
gb|BF480877.1|BF480877 FM1_14_D08.g1_A003 Floral-Induced Me... 79 4e-022
gb|BG053045.1|BG053045 RHIZ2_16_G09.g1_A003 Rhizome2 (RHIZ2... 79 4e-022
gb|BF587655.1|BF587655 FM1_39_B01.g1_A003 Floral-Induced Me... 79 4e-022
gb|CD232824.1|CD232824 SS1_10_A10.b1_A012 Salt-stressed see... 80 4e-022
gb|CN142009.1|CN142009 WOUND1_3_G01.b1_A002 Wounded leaves ... 79 4e-022
gb|BG051497.1|BG051497 FM1_57_C05.g1_A003 Floral-Induced Me... 79 4e-022
gb|BG101840.1|BG101840 RHIZ2_23_A11.g1_A003 Rhizome2 (RHIZ2... 79 4e-022
gb|BF585521.1|BF585521 FM1_23_E04.g1_A003 Floral-Induced Me... 79 4e-022
gb|BF586331.1|BF586331 FM1_27_E10.g1_A003 Floral-Induced Me... 79 4e-022
gb|BG103531.1|BG103531 RHIZ2_37_F08.g1_A003 Rhizome2 (RHIZ2... 79 4e-022
gb|CN141820.1|CN141820 WOUND1_2_C04.b1_A002 Wounded leaves ... 79 4e-022
gb|BF422097.1|BF422097 FM1_12_H01.g1_A003 Floral-Induced Me... 79 4e-022
gb|BG559728.1|BG559728 RHIZ2_72_H05.g1_A003 Rhizome2 (RHIZ2... 79 4e-022
gb|BG559169.1|BG559169 RHIZ2_55_E04.g1_A003 Rhizome2 (RHIZ2... 79 4e-022
gb|BF587567.1|BF587567 FM1_38_A04.g1_A003 Floral-Induced Me... 79 4e-022
gb|CW274641.1|CW274641 104_747_11404533_116_35374_085 Sorgh... 106 4e-022
gb|CN136482.1|CN136482 OX1_43_G11.b1_A002 Oxidatively-stres... 79 5e-022
gb|CN152460.1|CN152460 WOUND1_82_E09.b1_A002 Wounded leaves... 79 5e-022
gb|CN145795.1|CN145795 WOUND1_35_G08.b1_A002 Wounded leaves... 79 5e-022
gb|CN138826.1|CN138826 OX1_14_E07.b1_A002 Oxidatively-stres... 79 5e-022
gb|CN149178.1|CN149178 WOUND1_61_E05.b1_A002 Wounded leaves... 79 5e-022
gb|CN149689.1|CN149689 WOUND1_64_G04.b1_A002 Wounded leaves... 79 5e-022
gb|CN144829.1|CN144829 WOUND1_25_E06.b2_A002 Wounded leaves... 79 5e-022
gb|CX616676.1|CX616676 GABR1_29_F11.b1_A002 GA- or brassino... 79 5e-022
gb|CN146873.1|CN146873 WOUND1_44_H01.b1_A002 Wounded leaves... 79 5e-022
gb|CX614786.1|CX614786 GABR1_16_G01.b1_A002 GA- or brassino... 79 5e-022
gb|CX617521.1|CX617521 GABR1_34_E12.b1_A002 GA- or brassino... 79 5e-022
gb|CX621923.1|CX621923 GABR1_61_A11.b2_A002 GA- or brassino... 79 5e-022
gb|CN148248.1|CN148248 WOUND1_55_D01.b1_A002 Wounded leaves... 79 5e-022
gb|CN143583.1|CN143583 WOUND1_17_D11.b1_A002 Wounded leaves... 79 5e-022
gb|CN148653.1|CN148653 WOUND1_58_A03.b1_A002 Wounded leaves... 79 5e-022
gb|CX619557.1|CX619557 GABR1_46_F01.b1_A002 GA- or brassino... 79 5e-022
gb|CN147921.1|CN147921 WOUND1_53_C12.b1_A002 Wounded leaves... 79 5e-022
gb|CX621480.1|CX621480 GABR1_58_H03.b1_A002 GA- or brassino... 79 5e-022
gb|CX623153.1|CX623153 GABR1_68_B11.b1_A002 GA- or brassino... 79 5e-022
gb|CF430453.1|CF430453 PH1_28_H07.b1_A002 Phosphorous-defic... 79 5e-022
gb|CX622795.1|CX622795 GABR1_66_B07.b1_A002 GA- or brassino... 79 5e-022
gb|CN148873.1|CN148873 WOUND1_59_G12.b1_A002 Wounded leaves... 79 5e-022
gb|CX613095.1|CX613095 GABR1_6_F02.b1_A002 GA- or brassinol... 79 5e-022
gb|CX615252.1|CX615252 GABR1_19_B10.b1_A002 GA- or brassino... 79 5e-022
gb|CN143427.1|CN143427 WOUND1_16_E08.b1_A002 Wounded leaves... 79 5e-022
gb|CN145174.1|CN145174 WOUND1_27_F04.b2_A002 Wounded leaves... 79 5e-022
gb|CX618715.1|CX618715 GABR1_41_F03.b1_A002 GA- or brassino... 79 5e-022
gb|CN132570.1|CN132570 OX1_7_A08.b1_A002 Oxidatively-stress... 79 5e-022
gb|CN144266.1|CN144266 WOUND1_21_D08.b1_A002 Wounded leaves... 79 5e-022
gb|CD428325.1|CD428325 ETH1_31_E07.b1_A002 Ethylene-treated... 79 5e-022
gb|CN143911.1|CN143911 WOUND1_19_D01.b1_A002 Wounded leaves... 79 5e-022
gb|CX617315.1|CX617315 GABR1_33_B07.b1_A002 GA- or brassino... 79 5e-022
gb|CN148222.1|CN148222 WOUND1_55_A03.b1_A002 Wounded leaves... 79 5e-022
gb|CX615576.1|CX615576 GABR1_21_A06.b1_A002 GA- or brassino... 79 5e-022
gb|CD463431.1|CD463431 ETH1_44_H06.b1_A002 Ethylene-treated... 79 5e-022
gb|CN144419.1|CN144419 WOUND1_22_D03.b1_A002 Wounded leaves... 79 5e-022
gb|CX617692.1|CX617692 GABR1_35_E09.b1_A002 GA- or brassino... 79 5e-022
gb|CD461983.1|CD461983 SA1_36_E11.b1_A002 Salicylic acid-tr... 79 5e-022
gb|CX621929.1|CX621929 GABR1_61_B07.b2_A002 GA- or brassino... 79 5e-022
gb|BE357079.1|BE357079 DG1_146_H03.g1_A002 Dark Grown 1 (DG... 79 5e-022
gb|BE357078.1|BE357078 DG1_146_H04.g1_A002 Dark Grown 1 (DG... 79 5e-022
gb|CF433417.1|CF433417 NIT1_27_A12.b1_A002 Nitrogen-deficie... 79 5e-022
gb|CN132473.1|CN132473 OX1_6_H06.b1_A002 Oxidatively-stress... 79 5e-022
gb|CN142003.1|CN142003 WOUND1_3_F05.b1_A002 Wounded leaves ... 79 5e-022
gb|CD428892.1|CD428892 ETH1_1_F07.b1_A002 Ethylene-treated ... 79 5e-022
gb|CN152041.1|CN152041 WOUND1_79_H03.b1_A002 Wounded leaves... 79 5e-022
gb|CD426503.1|CD426503 SA1_21_D04.b1_A002 Salicylic acid-tr... 79 5e-022
gb|AW565734.1|AW565734 LG1_348_H08.g1_A002 Light Grown 1 (L... 79 5e-022
gb|CD426739.1|CD426739 SA1_25_F08.b1_A002 Salicylic acid-tr... 79 5e-022
gb|CN132808.1|CN132808 OX1_8_H01.b1_A002 Oxidatively-stress... 79 5e-022
gb|BM318271.1|BM318271 PI1_80_E11.g9_A002 Pathogen induced ... 79 5e-022
gb|CD424047.1|CD424047 SA1_3_E10.b1_A002 Salicylic acid-tre... 79 5e-022
gb|CX621634.1|CX621634 GABR1_59_F08.b1_A002 GA- or brassino... 79 5e-022
gb|CX613988.1|CX613988 GABR1_11_H11.b1_A002 GA- or brassino... 79 5e-022
gb|CX618845.1|CX618845 GABR1_42_B07.b1_A002 GA- or brassino... 79 5e-022
gb|AW286262.1|AW286262 LG1_329_E04.g1_A002 Light Grown 1 (L... 79 5e-022
gb|AW286277.1|AW286277 LG1_329_G04.g1_A002 Light Grown 1 (L... 79 5e-022
gb|BF422210.1|BF422210 FM1_13_D06.g1_A003 Floral-Induced Me... 79 5e-022
gb|CN146061.1|CN146061 WOUND1_37_E11.b1_A002 Wounded leaves... 79 7e-022
gb|BG053414.1|BG053414 RHIZ2_8_E09.g1_A003 Rhizome2 (RHIZ2)... 79 7e-022
gb|BG052581.1|BG052581 RHIZ2_25_C09.g1_A003 Rhizome2 (RHIZ2... 79 8e-022
gb|DN552724.1|DN552724 pSHR-RT-MR-H1_E05_S217 pSHR Sorghum ... 79 1e-021
gb|CN145798.1|CN145798 WOUND1_35_G12.b1_A002 Wounded leaves... 78 1e-021
gb|DN552712.1|DN552712 pSHR-RT-MR-H1_B06_C383 pSHR Sorghum ... 79 1e-021
gb|DN552528.1|DN552528 pSHR-RT-A-H1_C03_C331 pSHR Sorghum h... 79 1e-021
gb|DN552694.1|DN552694 pSHR-RT-MR-H1_C05_C331 pSHR Sorghum ... 79 1e-021
gb|AI723853.1|AI723853 RHIZ1_28_C08.y1_A001 Rhizome1 (RHIZ1... 79 1e-021
gb|CN148717.1|CN148717 WOUND1_58_H04.b1_A002 Wounded leaves... 78 1e-021
gb|CD203975.1|CD203975 HS1_3_G04.b1_A012 Heat-shocked seedl... 79 1e-021
gb|AW284016.1|AW284016 LG1_264_G03.g1_A002 Light Grown 1 (L... 79 1e-021
gb|BF586779.1|BF586779 FM1_30_C04.g1_A003 Floral-Induced Me... 79 1e-021
gb|CN145514.1|CN145514 WOUND1_33_H12.b1_A002 Wounded leaves... 79 1e-021
gb|CD204463.1|CD204463 HS1_8_D11.b1_A012 Heat-shocked seedl... 79 1e-021
gb|CD232362.1|CD232362 SS1_45_D11.b1_A012 Salt-stressed see... 79 1e-021
gb|CD213899.1|CD213899 HS1_69_A08.b1_A012 Heat-shocked seed... 79 1e-021
gb|CD213908.1|CD213908 HS1_69_G10.b1_A012 Heat-shocked seed... 79 1e-021
gb|CD210399.1|CD210399 HS1_51_F10.b1_A012 Heat-shocked seed... 79 1e-021
gb|CB924788.1|CB924788 ABA1_28_G05.b1_A012 Abscisic acid-tr... 79 1e-021
gb|CD209345.1|CD209345 HS1_42_D07.b1_A012 Heat-shocked seed... 79 1e-021
gb|CD213451.1|CD213451 HS1_41_D04.b1_A012 Heat-shocked seed... 79 1e-021
gb|CD230588.1|CD230588 SS1_47_A08.b1_A012 Salt-stressed see... 79 1e-021
gb|CB924927.1|CB924927 ABA1_29_G03.b1_A012 Abscisic acid-tr... 79 1e-021
gb|CD211400.1|CD211400 HS1_60_H01.b1_A012 Heat-shocked seed... 79 1e-021
gb|CD206973.1|CD206973 HS1_26_H04.b1_A012 Heat-shocked seed... 79 1e-021
gb|CD208382.1|CD208382 HS1_37_A07.b1_A012 Heat-shocked seed... 79 1e-021
gb|CD230120.1|CD230120 SS1_41_F06.b1_A012 Salt-stressed see... 79 1e-021
gb|CD235414.1|CD235414 SS1_29_H09.b1_A012 Salt-stressed see... 79 1e-021
gb|CD232272.1|CD232272 SS1_39_F07.b1_A012 Salt-stressed see... 79 1e-021
gb|CD213064.1|CD213064 HS1_28_A05.b1_A012 Heat-shocked seed... 79 1e-021
gb|CB924610.1|CB924610 ABA1_1_C01.b1_A012 Abscisic acid-tre... 79 1e-021
gb|CD214077.1|CD214077 HS1_70_E04.b1_A012 Heat-shocked seed... 79 1e-021
gb|CB924804.1|CB924804 ABA1_28_G12.b1_A012 Abscisic acid-tr... 79 1e-021
gb|CD213196.1|CD213196 HS1_29_A11.b1_A012 Heat-shocked seed... 79 1e-021
gb|CD231980.1|CD231980 SS1_31_G03.b1_A012 Salt-stressed see... 79 1e-021
gb|CD232396.1|CD232396 SS1_45_D02.b1_A012 Salt-stressed see... 79 1e-021
gb|CD210149.1|CD210149 HS1_57_D05.b1_A012 Heat-shocked seed... 79 1e-021
gb|CD205133.1|CD205133 HS1_12_A10.b1_A012 Heat-shocked seed... 79 1e-021
gb|CD212567.1|CD212567 HS1_6_E05.b1_A012 Heat-shocked seedl... 79 1e-021
gb|CD230338.1|CD230338 SS1_43_H07.b1_A012 Salt-stressed see... 79 1e-021
gb|BG103225.1|BG103225 RHIZ2_19_G03.g1_A003 Rhizome2 (RHIZ2... 79 1e-021
gb|CD210097.1|CD210097 HS1_57_F09.b1_A012 Heat-shocked seed... 79 2e-021
gb|CX620964.1|CX620964 GABR1_55_D10.b1_A002 GA- or brassino... 77 2e-021
gb|CX615873.1|CX615873 GABR1_24_B10.b1_A002 GA- or brassino... 76 2e-021
gb|BG355936.2|BG355936 EM1_18_E01.g1_A002 Embryo 1 (EM1) So... 72 2e-021
gb|CN145904.1|CN145904 WOUND1_36_C07.b1_A002 Wounded leaves... 76 3e-021
gb|CN151687.1|CN151687 WOUND1_77_A09.b1_A002 Wounded leaves... 76 3e-021
gb|CX619661.1|CX619661 GABR1_47_B01.b1_A002 GA- or brassino... 76 3e-021
gb|CN135186.1|CN135186 OX1_31_D03.b1_A002 Oxidatively-stres... 79 3e-021
gb|CD233774.1|CD233774 SS1_4_B05.b1_A012 Salt-stressed seed... 79 3e-021
gb|CX609670.1|CX609670 ANR1_14_B12.b1_A002 Anaerobic roots ... 73 4e-021
gb|CB925873.1|CB925873 ABA1_30_D12.b1_A012 Abscisic acid-tr... 77 4e-021
gb|BF177056.1|BF177056 EM1_3_A09.g1_A002 Embryo 1 (EM1) Sor... 70 5e-021
gb|BF177065.1|BF177065 EM1_3_B09.g1_A002 Embryo 1 (EM1) Sor... 70 5e-021
gb|CD431007.1|CD431007 ETH1_6_B01.b1_A002 Ethylene-treated ... 70 5e-021
gb|BM328758.1|BM328758 PIC1_26_B11.g1_A002 Pathogen-infecte... 70 5e-021
gb|BF481839.1|BF481839 FM1_22_A09.g1_A003 Floral-Induced Me... 79 7e-021
gb|CN150415.1|CN150415 WOUND1_69_B07.b1_A002 Wounded leaves... 75 7e-021
>gb|CW226825.1|CW226825 104_665_11205092_116_37226_080 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11205092, DNA
sequence
Length = 686
Score = 144 bits (308), Expect(3) = 2e-062
Identities = 54/60 (90%), Positives = 58/60 (96%)
Frame = +2 / +2
Query: 176 KEDGCDVRGYFAWSLLDNWEWAAGYTSRFGLYFVDYKDNLKRYPKNSVQWFKTLLSSS*R 355
+EDGCDVRGYFAWSLLDNWEW AGY+SRFGLYFVDYKD+LKRYPK+SVQWFK LLSSS*R
Sbjct: 392 REDGCDVRGYFAWSLLDNWEWTAGYSSRFGLYFVDYKDSLKRYPKSSVQWFKNLLSSS*R 571
Score = 91.3 bits (193), Expect(3) = 2e-028
Identities = 42/59 (71%), Positives = 45/59 (76%)
Frame = -2 / -3
Query: 354 LQLELSRVLNHWTEFLGYXXXXXXXSTK*SPNLEVYPAAHSQLSSNDHAKYPRTSHPSS 178
LQLEL+R LNH TE LGY STK*SPNL+ PA HSQLSS+DHAK PRTSHPSS
Sbjct: 570 LQLELNRFLNHCTELLGYLLRLSL*STK*SPNLDE*PAVHSQLSSSDHAK*PRTSHPSS 394
Score = 83.5 bits (176), Expect(3) = 2e-062
Identities = 33/41 (80%), Positives = 37/41 (90%)
Frame = +2 / +3
Query: 56 ITENGMDDGNSPFTSIQDALKDSKRIKYHNGYLNNVAASIK 178
+ + GMDDGNSPFTSI+DALKDSKRIKYHN YL N+AASIK
Sbjct: 189 VADAGMDDGNSPFTSIKDALKDSKRIKYHNDYLTNLAASIK 311
Score = 74.4 bits (156), Expect(4) = 8e-037
Identities = 29/36 (80%), Positives = 29/36 (80%)
Frame = +1 / +2
Query: 70 DGRRQQPFHLHPGRPQGQQEDQVPQRLPQQRCCLHK 177
DG RQQPFH H GR QGQQEDQVPQRLP Q CLHK
Sbjct: 203 DG*RQQPFHFHQGRAQGQQEDQVPQRLPHQPGCLHK 310
Score = 73.9 bits (155), Expect(4) = 8e-037
Identities = 32/49 (65%), Positives = 39/49 (79%)
Frame = +1 / +1
Query: 226 QLGMGRRVHLQIRALLRGLQG*PQEVPQELGPVVQDPAELQLKASHTDC 372
QLG+ R+ +QIRALLRGLQG PQE+PQELG VVQ+P +L LKA + C
Sbjct: 442 QLGVDGRLLIQIRALLRGLQGQPQEIPQELGAVVQEPVKL*LKAGNIAC 588
Score = 51.9 bits (107), Expect(3) = 2e-062
Identities = 20/23 (86%), Positives = 21/23 (91%)
Frame = +2 / +2
Query: 5 RKLMNYVKERYNSPTVYITENGM 73
R LMNYVKERYNSP VYITENG+
Sbjct: 32 RSLMNYVKERYNSPPVYITENGI 100
Score = 42.3 bits (86), Expect(3) = 2e-028
Identities = 14/21 (66%), Positives = 17/21 (80%)
Frame = -1 / -2
Query: 67 IFSDVNRWAIVPLLDIVHQLP 5
+F DVN WA+VP LD+VHQ P
Sbjct: 94 VFRDVNWWAVVPFLDVVHQAP 32
Score = 41.8 bits (85), Expect(5) = 7e-023
Identities = 15/21 (71%), Positives = 16/21 (76%)
Frame = -3 / -1
Query: 287 PCSPRSRARIWRCTRRPIPSC 225
PCSPRSRARIW +R PSC
Sbjct: 503 PCSPRSRARIWMSSRPSTPSC 441
Score = 39.1 bits (79), Expect(5) = 7e-023
Identities = 19/23 (82%), Positives = 19/23 (82%)
Frame = -2 / -3
Query: 72 IPFSVM*TVGLLYRSLT*FISFL 4
IPFSVM*T GLLY SLT*FI L
Sbjct: 99 IPFSVM*TGGLLYLSLT*FIRLL 31
Score = 34.1 bits (68), Expect(3) = 2e-028
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = -1 / -1
Query: 109 VLDGGERAVAVVHPIFSD 56
VLDG ERAVAV+HP S+
Sbjct: 242 VLDGSERAVAVIHPCISN 189
Score = 34.1 bits (68), Expect(5) = 7e-023
Identities = 16/24 (66%), Positives = 17/24 (70%)
Frame = -1 / -2
Query: 355 PSAGAQQGLEPLDRVLGVPLEVIL 284
PSA A Q LEPL R LGV LE +L
Sbjct: 571 PSARA*QVLEPLHRALGVSLEAVL 500
Score = 33.6 bits (67), Expect(5) = 7e-023
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = -2 / -2
Query: 111 ASWMEVKGLLPSSIPFS 61
AS MEVKGLLPSSIP S
Sbjct: 244 ASLMEVKGLLPSSIPAS 194
Score = 33.1 bits (66), Expect(5) = 7e-023
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = -1 / -2
Query: 223 QQRPREVPTHVTPVL 179
QQRPREV THV P+L
Sbjct: 439 QQRPREVATHVAPIL 395
Score = 31.8 bits (63), Expect(4) = 8e-037
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = +3 / +3
Query: 192 TCVGTSRGRCW 224
TCV TSRGRCW
Sbjct: 408 TCVATSRGRCW 440
Score = 30.9 bits (61), Expect(4) = 8e-037
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = +1 / +1
Query: 4 QEADELCQGAVQ*PNGLHH*K 66
+E DEL QG VQ P LHH K
Sbjct: 31 EEPDELRQGKVQQPTSLHHGK 93
>gb|CW494468.1|CW494468 fsbb001f285m07k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f285m07, DNA
sequence
Length = 598
Score = 155 bits (332), Expect(2) = 8e-057
Identities = 59/61 (96%), Positives = 61/61 (100%)
Frame = +2 / +3
Query: 176 KEDGCDVRGYFAWSLLDNWEWAAGYTSRFGLYFVDYKDNLKRYPKNSVQWFKTLLSSS*R 355
+EDGCDVRGYFAWSLLDNWEWAAGY+SRFGLYFVDYKDNLKRYPKNSVQWFKTLLSSS*R
Sbjct: 291 REDGCDVRGYFAWSLLDNWEWAAGYSSRFGLYFVDYKDNLKRYPKNSVQWFKTLLSSS*R 470
Query: 356 R 358
R
Sbjct: 471 R 473
Score = 116 bits (248), Expect(2) = 1e-030
Identities = 52/67 (77%), Positives = 54/67 (80%)
Frame = -2 / -1
Query: 360 *RLQLELSRVLNHWTEFLGYXXXXXXXSTK*SPNLEVYPAAHSQLSSNDHAKYPRTSHPS 181
*RLQLELSRVLNH TEFLGY STK*SPNLE+YPAAHSQLSS+DHAKYPRTSHPS
Sbjct: 475 *RLQLELSRVLNHCTEFLGYLLRLSL*STK*SPNLELYPAAHSQLSSSDHAKYPRTSHPS 296
Query: 180 SFMEAAT 160
S T
Sbjct: 295 SLQTGIT 275
Score = 89.0 bits (188), Expect(2) = 8e-057
Identities = 32/36 (88%), Positives = 34/36 (94%)
Frame = +1 / +1
Query: 70 DGRRQQPFHLHPGRPQGQQEDQVPQRLPQQRCCLHK 177
DGRRQQPFH HPGR QGQ+E+QVPQRLPQQRCCLHK
Sbjct: 55 DGRRQQPFHFHPGRAQGQKENQVPQRLPQQRCCLHK 162
Score = 84.5 bits (178), Expect(3) = 2e-036
Identities = 34/40 (85%), Positives = 37/40 (92%)
Frame = +2 / +2
Query: 59 TENGMDDGNSPFTSIQDALKDSKRIKYHNGYLNNVAASIK 178
++ GMDDGNSPFTSIQDALKD KRIKYHN YL+NVAASIK
Sbjct: 44 SDAGMDDGNSPFTSIQDALKDKKRIKYHNDYLSNVAASIK 163
Score = 80.8 bits (170), Expect(3) = 2e-036
Identities = 37/45 (82%), Positives = 39/45 (86%)
Frame = +1 / +2
Query: 226 QLGMGRRVHLQIRALLRGLQG*PQEVPQELGPVVQDPAELQLKAS 360
QLGMG RV +I ALLRGLQG* QEVPQELG VVQ+PAELQLKAS
Sbjct: 341 QLGMGGRVQFEIWALLRGLQG*SQEVPQELGAVVQNPAELQLKAS 475
Score = 57.9 bits (120), Expect(4) = 6e-028
Identities = 24/35 (68%), Positives = 27/35 (77%)
Frame = -1 / -3
Query: 388 NDQSNHSPCVTPSAGAQQGLEPLDRVLGVPLEVIL 284
N + S +TPSAGAQQG EPL RVLGVPLE+IL
Sbjct: 503 NQSKSQSVTLTPSAGAQQGFEPLHRVLGVPLEIIL 399
Score = 49.6 bits (102), Expect(4) = 6e-028
Identities = 18/22 (81%), Positives = 19/22 (86%)
Frame = -3 / -2
Query: 290 YPCSPRSRARIWRCTRRPIPSC 225
YPCSPRSRA+I CTR PIPSC
Sbjct: 405 YPCSPRSRAQISNCTRPPIPSC 340
Score = 39.6 bits (80), Expect(2) = 1e-030
Identities = 16/17 (94%), Positives = 16/17 (94%)
Frame = -2 / -2
Query: 111 ASWMEVKGLLPSSIPFS 61
ASWMEVKGLLPSSIP S
Sbjct: 96 ASWMEVKGLLPSSIPAS 46
Score = 38.6 bits (78), Expect(4) = 6e-028
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = -3 / -3
Query: 107 PGWR*KGCCRRPSHFQ 60
PGW+*KGCCRRPS Q
Sbjct: 92 PGWK*KGCCRRPSLHQ 45
Score = 36.3 bits (73), Expect(4) = 6e-028
Identities = 12/15 (80%), Positives = 14/15 (93%)
Frame = -1 / -3
Query: 223 QQRPREVPTHVTPVL 179
QQRPRE+PTH+ PVL
Sbjct: 338 QQRPREIPTHIAPVL 294
Score = 29.5 bits (58), Expect(3) = 2e-036
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +3 / +1
Query: 195 CVGTSRGRCW 224
CVG SRGRCW
Sbjct: 310 CVGISRGRCW 339
>gb|CW498861.1|CW498861 fsbb001f293f01k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f293f01, DNA
sequence
Length = 626
Score = 108 bits (231), Expect(3) = 4e-054
Identities = 39/41 (95%), Positives = 41/41 (100%)
Frame = +2 / -2
Query: 176 KEDGCDVRGYFAWSLLDNWEWAAGYTSRFGLYFVDYKDNLK 298
+EDGCDVRGYFAWSLLDNWEWAAGY+SRFGLYFVDYKDNLK
Sbjct: 124 REDGCDVRGYFAWSLLDNWEWAAGYSSRFGLYFVDYKDNLK 2
Score = 89.0 bits (188), Expect(3) = 4e-054
Identities = 32/36 (88%), Positives = 34/36 (94%)
Frame = +1 / -3
Query: 70 DGRRQQPFHLHPGRPQGQQEDQVPQRLPQQRCCLHK 177
DGRRQQPFH HPGR QGQ+E+QVPQRLPQQRCCLHK
Sbjct: 360 DGRRQQPFHFHPGRAQGQKENQVPQRLPQQRCCLHK 253
Score = 84.5 bits (178), Expect(4) = 2e-031
Identities = 34/40 (85%), Positives = 37/40 (92%)
Frame = +2 / -1
Query: 59 TENGMDDGNSPFTSIQDALKDSKRIKYHNGYLNNVAASIK 178
++ GMDDGNSPFTSIQDALKD KRIKYHN YL+NVAASIK
Sbjct: 371 SDAGMDDGNSPFTSIQDALKDKKRIKYHNDYLSNVAASIK 252
Score = 79.4 bits (167), Expect(3) = 5e-028
Identities = 32/39 (82%), Positives = 34/39 (87%)
Frame = -2 / +3
Query: 276 TK*SPNLEVYPAAHSQLSSNDHAKYPRTSHPSSFMEAAT 160
TK*SPNLE+YPAAHSQLSS+DHAKYPRTSHPSS T
Sbjct: 24 TK*SPNLELYPAAHSQLSSSDHAKYPRTSHPSSLQTGIT 140
Score = 56.5 bits (117), Expect(3) = 4e-054
Identities = 22/22 (100%), Positives = 22/22 (100%)
Frame = +2 / -3
Query: 5 RKLMNYVKERYNSPTVYITENG 70
RKLMNYVKERYNSPTVYITENG
Sbjct: 522 RKLMNYVKERYNSPTVYITENG 457
Score = 49.6 bits (102), Expect(4) = 4e-024
Identities = 18/22 (81%), Positives = 19/22 (86%)
Frame = -3 / +1
Query: 290 YPCSPRSRARIWRCTRRPIPSC 225
YPCSPRSRA+I CTR PIPSC
Sbjct: 10 YPCSPRSRAQISNCTRPPIPSC 75
Score = 46.9 bits (96), Expect(3) = 5e-028
Identities = 21/24 (87%), Positives = 23/24 (95%)
Frame = -2 / +2
Query: 75 SIPFSVM*TVGLLYRSLT*FISFL 4
++PFSVM*TVGLLY SLT*FISFL
Sbjct: 452 ALPFSVM*TVGLLYLSLT*FISFL 523
Score = 45.1 bits (92), Expect(4) = 4e-024
Identities = 17/22 (77%), Positives = 19/22 (86%)
Frame = -3 / +3
Query: 74 PSHFQ*CKPLGYCTAP*HSSSA 9
P F+*CKP GYCT+P*HSSSA
Sbjct: 453 PYRFR*CKPSGYCTSP*HSSSA 518
Score = 41.8 bits (85), Expect(4) = 2e-031
Identities = 16/21 (76%), Positives = 19/21 (90%)
Frame = +1 / -2
Query: 4 QEADELCQGAVQ*PNGLHH*K 66
++ADELCQG VQ*P+GLHH K
Sbjct: 523 KKADELCQGEVQ*PDGLHHRK 461
Score = 39.6 bits (80), Expect(3) = 5e-028
Identities = 16/17 (94%), Positives = 16/17 (94%)
Frame = -2 / +1
Query: 111 ASWMEVKGLLPSSIPFS 61
ASWMEVKGLLPSSIP S
Sbjct: 319 ASWMEVKGLLPSSIPAS 369
Score = 39.1 bits (79), Expect(4) = 2e-031
Identities = 18/24 (75%), Positives = 19/24 (79%)
Frame = +1 / -1
Query: 226 QLGMGRRVHLQIRALLRGLQG*PQ 297
QLGMG RV +I ALLRGLQG* Q
Sbjct: 74 QLGMGGRVQFEIWALLRGLQG*SQ 3
Score = 38.6 bits (78), Expect(4) = 4e-024
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = -3 / +2
Query: 107 PGWR*KGCCRRPSHFQ 60
PGW+*KGCCRRPS Q
Sbjct: 323 PGWK*KGCCRRPSLHQ 370
Score = 36.3 bits (73), Expect(4) = 4e-024
Identities = 12/15 (80%), Positives = 14/15 (93%)
Frame = -1 / +2
Query: 223 QQRPREVPTHVTPVL 179
QQRPRE+PTH+ PVL
Sbjct: 77 QQRPREIPTHIAPVL 121
Score = 29.5 bits (58), Expect(4) = 2e-031
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +3 / -3
Query: 195 CVGTSRGRCW 224
CVG SRGRCW
Sbjct: 105 CVGISRGRCW 76
>gb|CW493895.1|CW493895 fsbb001f284o06f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f284o06, DNA
sequence
Length = 812
Score = 144 bits (308), Expect(2) = 2e-052
Identities = 54/60 (90%), Positives = 58/60 (96%)
Frame = +2 / -2
Query: 176 KEDGCDVRGYFAWSLLDNWEWAAGYTSRFGLYFVDYKDNLKRYPKNSVQWFKTLLSSS*R 355
+EDGCDVRGYFAWSLLDNWEW AGY+SRFGLYFVDYKD+LKRYPK+SVQWFK LLSSS*R
Sbjct: 544 REDGCDVRGYFAWSLLDNWEWTAGYSSRFGLYFVDYKDSLKRYPKSSVQWFKNLLSSS*R 365
Score = 91.3 bits (193), Expect(2) = 3e-021
Identities = 42/59 (71%), Positives = 45/59 (76%)
Frame = -2 / +3
Query: 354 LQLELSRVLNHWTEFLGYXXXXXXXSTK*SPNLEVYPAAHSQLSSNDHAKYPRTSHPSS 178
LQLEL+R LNH TE LGY STK*SPNL+ PA HSQLSS+DHAK PRTSHPSS
Sbjct: 366 LQLELNRFLNHCTELLGYLLRLSL*STK*SPNLDE*PAVHSQLSSSDHAK*PRTSHPSS 542
Score = 83.5 bits (176), Expect(2) = 2e-052
Identities = 33/41 (80%), Positives = 37/41 (90%)
Frame = +2 / -3
Query: 56 ITENGMDDGNSPFTSIQDALKDSKRIKYHNGYLNNVAASIK 178
+ + GMDDGNSPFTSI+DALKDSKRIKYHN YL N+AASIK
Sbjct: 747 VADAGMDDGNSPFTSIKDALKDSKRIKYHNDYLTNLAASIK 625
Score = 74.4 bits (156), Expect(3) = 7e-033
Identities = 29/36 (80%), Positives = 29/36 (80%)
Frame = +1 / -2
Query: 70 DGRRQQPFHLHPGRPQGQQEDQVPQRLPQQRCCLHK 177
DG RQQPFH H GR QGQQEDQVPQRLP Q CLHK
Sbjct: 733 DG*RQQPFHFHQGRAQGQQEDQVPQRLPHQPGCLHK 626
Score = 73.9 bits (155), Expect(3) = 7e-033
Identities = 32/49 (65%), Positives = 39/49 (79%)
Frame = +1 / -1
Query: 226 QLGMGRRVHLQIRALLRGLQG*PQEVPQELGPVVQDPAELQLKASHTDC 372
QLG+ R+ +QIRALLRGLQG PQE+PQELG VVQ+P +L LKA + C
Sbjct: 494 QLGVDGRLLIQIRALLRGLQGQPQEIPQELGAVVQEPVKL*LKAGNIAC 348
Score = 34.1 bits (68), Expect(2) = 3e-021
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = -1 / +1
Query: 109 VLDGGERAVAVVHPIFSD 56
VLDG ERAVAV+HP S+
Sbjct: 694 VLDGSERAVAVIHPCISN 747
Score = 31.8 bits (63), Expect(3) = 7e-033
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = +3 / -3
Query: 192 TCVGTSRGRCW 224
TCV TSRGRCW
Sbjct: 528 TCVATSRGRCW 496
>gb|CW041974.1|CW041974 104_275_10506864_115_30285 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10506864, DNA
sequence
Length = 631
Score = 144 bits (308), Expect(2) = 2e-052
Identities = 54/60 (90%), Positives = 58/60 (96%)
Frame = +2 / +1
Query: 176 KEDGCDVRGYFAWSLLDNWEWAAGYTSRFGLYFVDYKDNLKRYPKNSVQWFKTLLSSS*R 355
+EDGCDVRGYFAWSLLDNWEW AGY+SRFGLYFVDYKD+LKRYPK+SVQWFK LLSSS*R
Sbjct: 268 REDGCDVRGYFAWSLLDNWEWTAGYSSRFGLYFVDYKDSLKRYPKSSVQWFKNLLSSS*R 447
Score = 91.3 bits (193), Expect(2) = 2e-021
Identities = 42/59 (71%), Positives = 45/59 (76%)
Frame = -2 / -3
Query: 354 LQLELSRVLNHWTEFLGYXXXXXXXSTK*SPNLEVYPAAHSQLSSNDHAKYPRTSHPSS 178
LQLEL+R LNH TE LGY STK*SPNL+ PA HSQLSS+DHAK PRTSHPSS
Sbjct: 446 LQLELNRFLNHCTELLGYLLRLSL*STK*SPNLDE*PAVHSQLSSSDHAK*PRTSHPSS 270
Score = 83.5 bits (176), Expect(2) = 2e-052
Identities = 33/41 (80%), Positives = 37/41 (90%)
Frame = +2 / +2
Query: 56 ITENGMDDGNSPFTSIQDALKDSKRIKYHNGYLNNVAASIK 178
+ + GMDDGNSPFTSI+DALKDSKRIKYHN YL N+AASIK
Sbjct: 65 VADAGMDDGNSPFTSIKDALKDSKRIKYHNDYLTNLAASIK 187
Score = 74.4 bits (156), Expect(3) = 7e-033
Identities = 29/36 (80%), Positives = 29/36 (80%)
Frame = +1 / +1
Query: 70 DGRRQQPFHLHPGRPQGQQEDQVPQRLPQQRCCLHK 177
DG RQQPFH H GR QGQQEDQVPQRLP Q CLHK
Sbjct: 79 DG*RQQPFHFHQGRAQGQQEDQVPQRLPHQPGCLHK 186
Score = 73.9 bits (155), Expect(3) = 7e-033
Identities = 32/49 (65%), Positives = 39/49 (79%)
Frame = +1 / +3
Query: 226 QLGMGRRVHLQIRALLRGLQG*PQEVPQELGPVVQDPAELQLKASHTDC 372
QLG+ R+ +QIRALLRGLQG PQE+PQELG VVQ+P +L LKA + C
Sbjct: 318 QLGVDGRLLIQIRALLRGLQGQPQEIPQELGAVVQEPVKL*LKAGNIAC 464
Score = 34.1 bits (68), Expect(2) = 2e-021
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = -1 / -1
Query: 109 VLDGGERAVAVVHPIFSD 56
VLDG ERAVAV+HP S+
Sbjct: 118 VLDGSERAVAVIHPCISN 65
Score = 31.8 bits (63), Expect(3) = 7e-033
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = +3 / +2
Query: 192 TCVGTSRGRCW 224
TCV TSRGRCW
Sbjct: 284 TCVATSRGRCW 316
>gb|BG053035.1|BG053035 RHIZ2_16_F06.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 555
Score = 185 bits (399), Expect = 6e-046
Identities = 65/112 (58%), Positives = 91/112 (81%)
Frame = +2 / +1
Query: 8 KLMNYVKERYNSPTVYITENGMDDGNSPFTSIQDALKDSKRIKYHNGYLNNVAASIKEDG 187
KLM ++KE+Y +P V ITENGMDD N+ F+ +++ L+D KRI+YHN Y++N+ +I+++G
Sbjct: 22 KLMKHIKEKYGNPPVIITENGMDDANNRFSRLENDLQDDKRIQYHNDYMSNLLDAIRKEG 201
Query: 188 CDVRGYFAWSLLDNWEWAAGYTSRFGLYFVDYKDNLKRYPKNSVQWFKTLLS 343
C+V GYF WSLLDNWEW +GYT RFGLY++DY +NL R PK SV+WFK +L+
Sbjct: 202 CNVHGYFVWSLLDNWEWNSGYTVRFGLYYIDYNNNLTRIPKASVEWFKQVLA 357
>gb|CF431284.1|CF431284 NIT1_5_A06.b1_A002 Nitrogen-deficient seedlings Sorghum bicolor
cDNA clone NIT1_5_A06_A002 3', mRNA sequence
Length = 587
Score = 185 bits (399), Expect = 6e-046
Identities = 65/112 (58%), Positives = 91/112 (81%)
Frame = +2 / +2
Query: 8 KLMNYVKERYNSPTVYITENGMDDGNSPFTSIQDALKDSKRIKYHNGYLNNVAASIKEDG 187
KLM ++KE+Y +P V ITENGMDD N+ F+ +++ L+D KRI+YHN Y++N+ +I+++G
Sbjct: 11 KLMKHIKEKYGNPPVIITENGMDDANNRFSRLENDLQDDKRIQYHNDYMSNLLDAIRKEG 190
Query: 188 CDVRGYFAWSLLDNWEWAAGYTSRFGLYFVDYKDNLKRYPKNSVQWFKTLLS 343
C+V GYF WSLLDNWEW +GYT RFGLY++DY +NL R PK SV+WFK +L+
Sbjct: 191 CNVHGYFVWSLLDNWEWNSGYTVRFGLYYIDYNNNLTRIPKASVEWFKQVLA 346
>gb|CW437333.1|CW437333 fsbb001f154g12f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f154g12, DNA
sequence
Length = 698
Score = 136 bits (292), Expect(2) = 7e-045
Identities = 50/58 (86%), Positives = 53/58 (91%)
Frame = +2 / -3
Query: 176 KEDGCDVRGYFAWSLLDNWEWAAGYTSRFGLYFVDYKDNLKRYPKNSVQWFKTLLSSS 349
+EDGCDVRGYF WSLLDNWEW AGYTSRFGLYFVDY +NLKRYPKNSV WFK LL+SS
Sbjct: 516 REDGCDVRGYFVWSLLDNWEWTAGYTSRFGLYFVDYNNNLKRYPKNSVLWFKNLLASS 343
Score = 65.7 bits (137), Expect(2) = 7e-045
Identities = 25/36 (69%), Positives = 30/36 (83%)
Frame = +2 / -3
Query: 71 MDDGNSPFTSIQDALKDSKRIKYHNGYLNNVAASIK 178
MDD NSPF S++DA+KD KRI YHN YL N+AASI+
Sbjct: 696 MDDSNSPFISLKDAVKDDKRISYHNEYLTNLAASIR 589
>gb|CW421777.1|CW421777 fsbb001f130l22k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f130l22, DNA
sequence
Length = 648
Score = 136 bits (292), Expect(2) = 3e-041
Identities = 50/58 (86%), Positives = 53/58 (91%)
Frame = +2 / +1
Query: 176 KEDGCDVRGYFAWSLLDNWEWAAGYTSRFGLYFVDYKDNLKRYPKNSVQWFKTLLSSS 349
+EDGCDVRGYF WSLLDNWEW AGYTSRFGLYFVDY +NLKRYPKNSV WFK LL+SS
Sbjct: 163 REDGCDVRGYFVWSLLDNWEWTAGYTSRFGLYFVDYNNNLKRYPKNSVLWFKNLLASS 336
Score = 53.3 bits (110), Expect(2) = 3e-041
Identities = 20/30 (66%), Positives = 25/30 (83%)
Frame = +2 / +1
Query: 89 PFTSIQDALKDSKRIKYHNGYLNNVAASIK 178
PF S++DA+KD KRI YHN YL N+AASI+
Sbjct: 1 PFISLKDAVKDDKRISYHNEYLTNLAASIR 90
>gb|CW389479.1|CW389479 fsbb001f074l04f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f074l04, DNA
sequence
Length = 674
Score = 144 bits (308), Expect(2) = 4e-040
Identities = 54/60 (90%), Positives = 58/60 (96%)
Frame = +2 / -1
Query: 176 KEDGCDVRGYFAWSLLDNWEWAAGYTSRFGLYFVDYKDNLKRYPKNSVQWFKTLLSSS*R 355
+EDGCDVRGYFAWSLLDNWEW AGY+SRFGLYFVDYKD+LKRYPK+SVQWFK LLSSS*R
Sbjct: 530 REDGCDVRGYFAWSLLDNWEWTAGYSSRFGLYFVDYKDSLKRYPKSSVQWFKNLLSSS*R 351
Score = 73.9 bits (155), Expect(3) = 1e-021
Identities = 32/49 (65%), Positives = 39/49 (79%)
Frame = +1 / -3
Query: 226 QLGMGRRVHLQIRALLRGLQG*PQEVPQELGPVVQDPAELQLKASHTDC 372
QLG+ R+ +QIRALLRGLQG PQE+PQELG VVQ+P +L LKA + C
Sbjct: 480 QLGVDGRLLIQIRALLRGLQGQPQEIPQELGAVVQEPVKL*LKAGNIAC 334
Score = 42.3 bits (86), Expect(2) = 4e-040
Identities = 16/21 (76%), Positives = 17/21 (80%)
Frame = +1 / -1
Query: 115 QGQQEDQVPQRLPQQRCCLHK 177
QG+QEDQVP RLP Q CLHK
Sbjct: 674 QGRQEDQVPHRLPHQLGCLHK 612
Score = 35.9 bits (72), Expect(3) = 1e-021
Identities = 15/21 (71%), Positives = 16/21 (76%)
Frame = +2 / -2
Query: 116 KDSKRIKYHNGYLNNVAASIK 178
K KRIKYH YL N+AASIK
Sbjct: 673 KAGKRIKYHIDYLTNLAASIK 611
Score = 31.8 bits (63), Expect(3) = 1e-021
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = +3 / -2
Query: 192 TCVGTSRGRCW 224
TCV TSRGRCW
Sbjct: 514 TCVATSRGRCW 482
>gb|CW437080.1|CW437080 fsbb001f154a08f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f154a08, DNA
sequence
Length = 667
Score = 135 bits (290), Expect(2) = 9e-039
Identities = 49/58 (84%), Positives = 53/58 (91%)
Frame = +2 / -3
Query: 176 KEDGCDVRGYFAWSLLDNWEWAAGYTSRFGLYFVDYKDNLKRYPKNSVQWFKTLLSSS 349
+EDGCDVRGYF WSLLDNWEW AGYTSRFGLYFVDY +N+KRYPKNSV WFK LL+SS
Sbjct: 515 REDGCDVRGYFVWSLLDNWEWTAGYTSRFGLYFVDYNNNIKRYPKNSVLWFKNLLASS 342
Score = 46.0 bits (94), Expect(2) = 9e-039
Identities = 17/26 (65%), Positives = 22/26 (84%)
Frame = +2 / -3
Query: 101 IQDALKDSKRIKYHNGYLNNVAASIK 178
++DA+KD KRI YHN YL N+AASI+
Sbjct: 665 LKDAVKDDKRISYHNEYLTNLAASIR 588
>gb|CN123998.1|CN123998 RHOH1_2_A09.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_2_A09_A002 3', mRNA sequence
Length = 799
Score = 99.1 bits (210), Expect(2) = 6e-038
Identities = 36/61 (59%), Positives = 43/61 (70%)
Frame = +2 / +3
Query: 158 NVAASIKEDGCDVRGYFAWSLLDNWEWAAGYTSRFGLYFVDYKDNLKRYPKNSVQWFKTL 337
N A +DG D+RGYFAWS LDN+EWA GYT RFG+ +VDYK+ L R+PK S WF
Sbjct: 231 NSVAQAIKDGADIRGYFAWSFLDNFEWAMGYTKRFGIVYVDYKNGLSRHPKASALWFSRF 410
Query: 338 L 340
L
Sbjct: 411 L 413
Score = 79.9 bits (168), Expect(2) = 6e-038
Identities = 28/59 (47%), Positives = 43/59 (72%)
Frame = +2 / +3
Query: 5 RKLMNYVKERYNSPTVYITENGMDDGNSPFTSIQDALKDSKRIKYHNGYLNNVAASIKE 181
RK++NY+ ++YN+P +YITENGMDD + ++ L D+ R+ Y GYLN+VA +IK+
Sbjct: 81 RKVLNYIVKKYNNPVIYITENGMDDEDDQSATLDQVLNDTTRVGYFKGYLNSVAQAIKD 257
>gb|CN127628.1|CN127628 RHOH1_24_C12.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_24_C12_A002 3', mRNA sequence
Length = 731
Score = 99.1 bits (210), Expect(2) = 6e-038
Identities = 36/61 (59%), Positives = 43/61 (70%)
Frame = +2 / +2
Query: 158 NVAASIKEDGCDVRGYFAWSLLDNWEWAAGYTSRFGLYFVDYKDNLKRYPKNSVQWFKTL 337
N A +DG D+RGYFAWS LDN+EWA GYT RFG+ +VDYK+ L R+PK S WF
Sbjct: 278 NSVAQAIKDGADIRGYFAWSFLDNFEWAMGYTKRFGIVYVDYKNGLSRHPKASALWFSRF 457
Query: 338 L 340
L
Sbjct: 458 L 460
Score = 79.9 bits (168), Expect(2) = 6e-038
Identities = 28/59 (47%), Positives = 43/59 (72%)
Frame = +2 / +2
Query: 5 RKLMNYVKERYNSPTVYITENGMDDGNSPFTSIQDALKDSKRIKYHNGYLNNVAASIKE 181
RK++NY+ ++YN+P +YITENGMDD + ++ L D+ R+ Y GYLN+VA +IK+
Sbjct: 128 RKVLNYIVKKYNNPVIYITENGMDDEDDQSATLDQVLNDTTRVGYFKGYLNSVAQAIKD 304
>gb|BG049317.1|BG049317 OV1_18_D10.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 684
Score = 99.1 bits (210), Expect(2) = 6e-038
Identities = 36/61 (59%), Positives = 43/61 (70%)
Frame = +2 / +3
Query: 158 NVAASIKEDGCDVRGYFAWSLLDNWEWAAGYTSRFGLYFVDYKDNLKRYPKNSVQWFKTL 337
N A +DG D+RGYFAWS LDN+EWA GYT RFG+ +VDYK+ L R+PK S WF
Sbjct: 243 NSVAQAIKDGADIRGYFAWSFLDNFEWAMGYTKRFGIVYVDYKNGLSRHPKASALWFSRF 422
Query: 338 L 340
L
Sbjct: 423 L 425
Score = 79.9 bits (168), Expect(2) = 6e-038
Identities = 28/59 (47%), Positives = 43/59 (72%)
Frame = +2 / +3
Query: 5 RKLMNYVKERYNSPTVYITENGMDDGNSPFTSIQDALKDSKRIKYHNGYLNNVAASIKE 181
RK++NY+ ++YN+P +YITENGMDD + ++ L D+ R+ Y GYLN+VA +IK+
Sbjct: 93 RKVLNYIVKKYNNPVIYITENGMDDEDDQSATLDQVLNDTTRVGYFKGYLNSVAQAIKD 269
>gb|BG932995.1|BG932995 DG1_69_H05.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 581
Score = 99.1 bits (210), Expect(2) = 3e-037
Identities = 36/61 (59%), Positives = 43/61 (70%)
Frame = +2 / +3
Query: 158 NVAASIKEDGCDVRGYFAWSLLDNWEWAAGYTSRFGLYFVDYKDNLKRYPKNSVQWFKTL 337
N A +DG D+RGYFAWS LDN+EWA GYT RFG+ +VDYK+ L R+PK S WF
Sbjct: 150 NSVAQAIKDGADIRGYFAWSFLDNFEWAMGYTKRFGIVYVDYKNGLSRHPKASALWFSRF 329
Query: 338 L 340
L
Sbjct: 330 L 332
Score = 77.6 bits (163), Expect(2) = 3e-037
Identities = 27/58 (46%), Positives = 42/58 (72%)
Frame = +2 / +3
Query: 8 KLMNYVKERYNSPTVYITENGMDDGNSPFTSIQDALKDSKRIKYHNGYLNNVAASIKE 181
K++NY+ ++YN+P +YITENGMDD + ++ L D+ R+ Y GYLN+VA +IK+
Sbjct: 3 KVLNYIVKKYNNPVIYITENGMDDEDDQSATLDQVLNDTTRVGYFKGYLNSVAQAIKD 176
>gb|BZ336705.1|BZ336705 hz38f05.g1 WGS-SbicolorF (JM107 adapted methyl filtered) Sorghum
bicolor genomic clone hz38f05 5', DNA sequence
Length = 684
Score = 79.4 bits (167), Expect(3) = 6e-037
Identities = 27/30 (90%), Positives = 28/30 (93%)
Frame = +2 / -1
Query: 176 KEDGCDVRGYFAWSLLDNWEWAAGYTSRFG 265
+EDGCDVRGYF WSLLDNWEW AGYTSRFG
Sbjct: 93 REDGCDVRGYFVWSLLDNWEWTAGYTSRFG 4
Score = 68.4 bits (143), Expect(3) = 6e-037
Identities = 26/37 (70%), Positives = 31/37 (83%)
Frame = +2 / -1
Query: 68 GMDDGNSPFTSIQDALKDSKRIKYHNGYLNNVAASIK 178
GMDD NSPF S++DA+KD KRI YHN YL N+AASI+
Sbjct: 276 GMDDSNSPFISLKDAVKDDKRISYHNEYLTNLAASIR 166
Score = 48.7 bits (100), Expect(3) = 6e-037
Identities = 18/22 (81%), Positives = 20/22 (90%)
Frame = +2 / -3
Query: 5 RKLMNYVKERYNSPTVYITENG 70
R LMNYVK+RYN+P VYITENG
Sbjct: 484 RSLMNYVKDRYNTPPVYITENG 419
>gb|CN129227.1|CN129227 RHOH1_34_E11.b3_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_34_E11_A002 3', mRNA sequence
Length = 809
Score = 95.0 bits (201), Expect(2) = 1e-036
Identities = 35/61 (57%), Positives = 42/61 (68%)
Frame = +2 / +2
Query: 158 NVAASIKEDGCDVRGYFAWSLLDNWEWAAGYTSRFGLYFVDYKDNLKRYPKNSVQWFKTL 337
N A +DG D+RGYFAWS LDN+EWA G T RFG+ +VDYK+ L R+PK S WF
Sbjct: 242 NSVAQAIKDGADIRGYFAWSFLDNFEWAMGCTKRFGIVYVDYKNGLSRHPKASALWFSRF 421
Query: 338 L 340
L
Sbjct: 422 L 424
Score = 79.9 bits (168), Expect(2) = 1e-036
Identities = 28/59 (47%), Positives = 43/59 (72%)
Frame = +2 / +2
Query: 5 RKLMNYVKERYNSPTVYITENGMDDGNSPFTSIQDALKDSKRIKYHNGYLNNVAASIKE 181
RK++NY+ ++YN+P +YITENGMDD + ++ L D+ R+ Y GYLN+VA +IK+
Sbjct: 92 RKVLNYIVKKYNNPVIYITENGMDDEDDQSATLDQVLNDTTRVGYFKGYLNSVAQAIKD 268
>gb|CW391208.1|CW391208 fsbb001f077d18f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f077d18, DNA
sequence
Length = 682
Score = 106 bits (227), Expect(3) = 1e-034
Identities = 38/53 (71%), Positives = 44/53 (83%)
Frame = +2 / +2
Query: 182 DGCDVRGYFAWSLLDNWEWAAGYTSRFGLYFVDYKDNLKRYPKNSVQWFKTLL 340
DG +V+GYFAWSLLDN+EWA+GYT RFG+YFVDY D LKRYPK+S WF L
Sbjct: 359 DGANVKGYFAWSLLDNFEWASGYTVRFGIYFVDYNDGLKRYPKSSAHWFTEFL 517
Score = 42.8 bits (87), Expect(3) = 1e-034
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = +2 / +3
Query: 5 RKLMNYVKERYNSPTVYITENG 70
R+L+ YVKE Y +PTVYITENG
Sbjct: 3 RELLLYVKENYGNPTVYITENG 68
Score = 36.3 bits (73), Expect(3) = 1e-034
Identities = 12/37 (32%), Positives = 26/37 (70%)
Frame = +2 / +3
Query: 68 GMDDGNSPFTSIQDALKDSKRIKYHNGYLNNVAASIK 178
G+D+ N+ S+++ALKD RI++H+ + + ++I+
Sbjct: 150 GVDEANNKSLSLEEALKDDTRIEFHHAHFLALQSAIR 260
>gb|CD231994.1|CD231994 SS1_31_E11.b1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_31_E11_A012 3', mRNA sequence
Length = 636
Score = 99.1 bits (210), Expect(2) = 2e-034
Identities = 36/61 (59%), Positives = 43/61 (70%)
Frame = +2 / +3
Query: 158 NVAASIKEDGCDVRGYFAWSLLDNWEWAAGYTSRFGLYFVDYKDNLKRYPKNSVQWFKTL 337
N A +DG D+RGYFAWS LDN+EWA GYT RFG+ +VDYK+ L R+PK S WF
Sbjct: 135 NSVAQAIKDGADIRGYFAWSFLDNFEWAMGYTKRFGIVYVDYKNGLSRHPKASALWFSRF 314
Query: 338 L 340
L
Sbjct: 315 L 317
Score = 68.0 bits (142), Expect(2) = 2e-034
Identities = 24/53 (45%), Positives = 37/53 (69%)
Frame = +2 / +3
Query: 23 VKERYNSPTVYITENGMDDGNSPFTSIQDALKDSKRIKYHNGYLNNVAASIKE 181
+ ++YN+P +YITENGMDD + ++ L D+ R+ Y GYLN+VA +IK+
Sbjct: 3 IVKKYNNPVIYITENGMDDEDDQSATLDQVLNDTTRVGYFKGYLNSVAQAIKD 161
>gb|CW299705.1|CW299705 104_782_11463260_148_35687_068 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11463260, DNA
sequence
Length = 646
Score = 106 bits (226), Expect(3) = 4e-034
Identities = 38/53 (71%), Positives = 43/53 (81%)
Frame = +2 / -1
Query: 182 DGCDVRGYFAWSLLDNWEWAAGYTSRFGLYFVDYKDNLKRYPKNSVQWFKTLL 340
DG +V+GYFAWSLLDN+EW GYT RFG+YFVDY D LKRYPK+S WFK L
Sbjct: 253 DGANVKGYFAWSLLDNFEWVNGYTVRFGIYFVDYSDGLKRYPKSSAHWFKKFL 95
Score = 41.8 bits (85), Expect(3) = 4e-034
Identities = 16/22 (72%), Positives = 18/22 (81%)
Frame = +2 / -1
Query: 5 RKLMNYVKERYNSPTVYITENG 70
R L+ YVKE Y +PTVYITENG
Sbjct: 643 RDLLLYVKENYGNPTVYITENG 578
Score = 35.9 bits (72), Expect(3) = 4e-034
Identities = 14/37 (37%), Positives = 27/37 (72%)
Frame = +2 / -1
Query: 68 GMDDGNSPFTSIQDALKDSKRIKYHNGYLNNVAASIK 178
G+D+ N+ +Q+ALKDS RI+Y++ +L + ++I+
Sbjct: 481 GVDEVNNKSLPLQEALKDSTRIEYYHKHLLALQSAIR 371
>gb|CW373637.1|CW373637 fsbb001f050b24k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f050b24, DNA
sequence
Length = 565
Score = 144 bits (308), Expect = 2e-033
Identities = 54/60 (90%), Positives = 58/60 (96%)
Frame = +2 / +1
Query: 176 KEDGCDVRGYFAWSLLDNWEWAAGYTSRFGLYFVDYKDNLKRYPKNSVQWFKTLLSSS*R 355
+EDGCDVRGYFAWSLLDNWEW AGY+SRFGLYFVDYKD+LKRYPK+SVQWFK LLSSS*R
Sbjct: 28 REDGCDVRGYFAWSLLDNWEWTAGYSSRFGLYFVDYKDSLKRYPKSSVQWFKNLLSSS*R 207
>gb|CX621455.1|CX621455 GABR1_58_E10.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_58_E10_A002 3', mRNA sequence
Length = 391
Score = 138 bits (296), Expect = 9e-032
Identities = 47/81 (58%), Positives = 67/81 (82%)
Frame = +2 / +1
Query: 101 IQDALKDSKRIKYHNGYLNNVAASIKEDGCDVRGYFAWSLLDNWEWAAGYTSRFGLYFVD 280
+++ L+D KRI+YHN Y+ N+ +I+++GC+V GYF WSLLDNWEW++GYT RFGLY++D
Sbjct: 4 LENDLQDDKRIQYHNDYMFNLLDAIRKEGCNVHGYFVWSLLDNWEWSSGYTVRFGLYYID 183
Query: 281 YKDNLKRYPKNSVQWFKTLLS 343
Y +NL R PK SV+WFK +L+
Sbjct: 184 YNNNLTRIPKASVEWFKQVLA 246
>gb|CW491525.1|CW491525 fsbb001f281g21f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f281g21, DNA
sequence
Length = 648
Score = 136 bits (292), Expect = 3e-031
Identities = 50/58 (86%), Positives = 53/58 (91%)
Frame = +2 / +1
Query: 176 KEDGCDVRGYFAWSLLDNWEWAAGYTSRFGLYFVDYKDNLKRYPKNSVQWFKTLLSSS 349
+EDGCDVRGYF WSLLDNWEW AGYTSRFGLYFVDY +NLKRYPKNSV WFK LL+SS
Sbjct: 25 REDGCDVRGYFVWSLLDNWEWTAGYTSRFGLYFVDYNNNLKRYPKNSVLWFKNLLASS 198
>gb|CW204789.1|CW204789 104_632_11186735_116_37060_082 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11186735, DNA
sequence
Length = 643
Score = 104 bits (222), Expect(2) = 6e-029
Identities = 38/58 (65%), Positives = 44/58 (75%)
Frame = +2 / -3
Query: 167 ASIKEDGCDVRGYFAWSLLDNWEWAAGYTSRFGLYFVDYKDNLKRYPKNSVQWFKTLL 340
+SI DG +V+ YFAWSL+DN+EW GYT RFGL +VDY D LKRYPKNS WFK L
Sbjct: 329 SSIHRDGANVKAYFAWSLMDNFEWVNGYTVRFGLNYVDYNDGLKRYPKNSAHWFKAFL 156
Score = 44.1 bits (90), Expect(2) = 6e-029
Identities = 17/49 (34%), Positives = 30/49 (61%)
Frame = +2 / -2
Query: 38 NSPTVYITENGMDDGNSPFTSIQDALKDSKRIKYHNGYLNNVAASIKED 184
N T + + G D+ N+ +Q+ALKD RI+YH+ +L + ++I+ D
Sbjct: 549 NLKTSFYFDTGFDEANNKSLPLQEALKDDTRIEYHHKHLLALLSAIRSD 403
>gb|CD233911.1|CD233911 SS1_5_B11.b1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_5_B11_A012 3', mRNA sequence
Length = 659
Score = 99.1 bits (210), Expect(2) = 7e-027
Identities = 36/61 (59%), Positives = 43/61 (70%)
Frame = +2 / +1
Query: 158 NVAASIKEDGCDVRGYFAWSLLDNWEWAAGYTSRFGLYFVDYKDNLKRYPKNSVQWFKTL 337
N A +DG D+RGYFAWS LDN+EWA GYT RFG+ +VDYK+ L R+PK S WF
Sbjct: 103 NSVAQAIKDGADIRGYFAWSFLDNFEWAMGYTKRFGIVYVDYKNGLSRHPKASALWFSRF 282
Query: 338 L 340
L
Sbjct: 283 L 285
Score = 42.8 bits (87), Expect(2) = 7e-027
Identities = 16/38 (42%), Positives = 24/38 (63%)
Frame = +2 / +1
Query: 68 GMDDGNSPFTSIQDALKDSKRIKYHNGYLNNVAASIKE 181
GMDD + ++ L D+ R+ Y GYLN+VA +IK+
Sbjct: 16 GMDDEDDQSATLDQVLNDTTRVGYFKGYLNSVAQAIKD 129
>gb|CW165207.1|CW165207 104_573_11152383_148_36473_056 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11152383, DNA
sequence
Length = 721
Score = 99.1 bits (210), Expect(2) = 1e-026
Identities = 35/53 (66%), Positives = 41/53 (77%)
Frame = +2 / -3
Query: 182 DGCDVRGYFAWSLLDNWEWAAGYTSRFGLYFVDYKDNLKRYPKNSVQWFKTLL 340
DG D+RGYFAWS LDN+EWA GYT RFG+ +VDYK+ L R+PK S WFK L
Sbjct: 245 DGADIRGYFAWSFLDNFEWAMGYTKRFGIVYVDYKNGLSRHPKASALWFKRFL 87
Score = 41.8 bits (85), Expect(2) = 1e-026
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +2 / -2
Query: 68 GMDDGNSPFTSIQDALKDSKRIKYHNGYLNNVAASIK 178
GMDD + ++ L D+ R+ Y GYLN+VA +IK
Sbjct: 471 GMDDEDDQSATLDQVLNDTTRVGYFKGYLNSVAQAIK 361
>gb|CW143523.1|CW143523 104_535_11137466_116_34955_009 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11137466, DNA
sequence
Length = 599
Score = 78.0 bits (164), Expect(3) = 4e-026
Identities = 27/34 (79%), Positives = 32/34 (94%)
Frame = +2 / +1
Query: 182 DGCDVRGYFAWSLLDNWEWAAGYTSRFGLYFVDY 283
DG +V+GYFAWSLLDN+EWA+GYT RFG+YFVDY
Sbjct: 493 DGANVKGYFAWSLLDNFEWASGYTVRFGIYFVDY 594
Score = 42.8 bits (87), Expect(3) = 4e-026
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = +2 / +2
Query: 5 RKLMNYVKERYNSPTVYITENG 70
R+L+ YVKE Y +PTVYITENG
Sbjct: 137 RELLLYVKENYGNPTVYITENG 202
Score = 36.3 bits (73), Expect(3) = 4e-026
Identities = 12/37 (32%), Positives = 26/37 (70%)
Frame = +2 / +2
Query: 68 GMDDGNSPFTSIQDALKDSKRIKYHNGYLNNVAASIK 178
G+D+ N+ S+++ALKD RI++H+ + + ++I+
Sbjct: 284 GVDEANNKSLSLEEALKDDTRIEFHHAHFLALQSAIR 394
>gb|CW038580.1|CW038580 104_270_10505004_115_30386 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10505004, DNA
sequence
Length = 708
Score = 96.8 bits (205), Expect(2) = 6e-026
Identities = 34/53 (64%), Positives = 40/53 (75%)
Frame = +2 / +3
Query: 182 DGCDVRGYFAWSLLDNWEWAAGYTSRFGLYFVDYKDNLKRYPKNSVQWFKTLL 340
DG D+RGYFAWS LDN+EWA GYT RFG+ +VDYK+ L R+PK S WF L
Sbjct: 474 DGADIRGYFAWSFLDNFEWAMGYTKRFGIVYVDYKNGLSRHPKASALWFSRFL 632
Score = 41.8 bits (85), Expect(2) = 6e-026
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +2 / +2
Query: 68 GMDDGNSPFTSIQDALKDSKRIKYHNGYLNNVAASIK 178
GMDD + ++ L D+ R+ Y GYLN+VA +IK
Sbjct: 248 GMDDEDDQSATLDQVLNDTTRVGYFKGYLNSVAQAIK 358
>gb|CW458790.1|CW458790 fsbb001f205d22f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f205d22, DNA
sequence
Length = 654
Score = 96.8 bits (205), Expect(2) = 6e-026
Identities = 34/53 (64%), Positives = 40/53 (75%)
Frame = +2 / -2
Query: 182 DGCDVRGYFAWSLLDNWEWAAGYTSRFGLYFVDYKDNLKRYPKNSVQWFKTLL 340
DG D+RGYFAWS LDN+EWA GYT RFG+ +VDYK+ L R+PK S WF L
Sbjct: 215 DGADIRGYFAWSFLDNFEWAMGYTKRFGIVYVDYKNGLSRHPKASALWFSRFL 57
Score = 41.8 bits (85), Expect(2) = 6e-026
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +2 / -1
Query: 68 GMDDGNSPFTSIQDALKDSKRIKYHNGYLNNVAASIK 178
GMDD + ++ L D+ R+ Y GYLN+VA +IK
Sbjct: 441 GMDDEDDQSATLDQVLNDTTRVGYFKGYLNSVAQAIK 331
>gb|CW029341.1|CW029341 104_256_10499619_114_30399 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10499619, DNA
sequence
Length = 728
Score = 96.8 bits (205), Expect(2) = 2e-025
Identities = 34/53 (64%), Positives = 40/53 (75%)
Frame = +2 / -3
Query: 182 DGCDVRGYFAWSLLDNWEWAAGYTSRFGLYFVDYKDNLKRYPKNSVQWFKTLL 340
DG D+RGYFAWS LDN+EWA GYT RFG+ +VDYK+ L R+PK S WF L
Sbjct: 453 DGADIRGYFAWSFLDNFEWAMGYTKRFGIVYVDYKNGLSRHPKASALWFSRFL 295
Score = 40.5 bits (82), Expect(2) = 2e-025
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +2 / -2
Query: 68 GMDDGNSPFTSIQDALKDSKRIKYHNGYLNNVAASIK 178
GMDD + ++ + D+ R+ Y GYLN+VA +IK
Sbjct: 679 GMDDEDDQSATLDQVVNDTTRVGYFKGYLNSVAQAIK 569
>gb|BM328168.1|BM328168 PIC1_21_H06.g1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 613
Score = 75.8 bits (159), Expect(2) = 6e-025
Identities = 28/59 (47%), Positives = 41/59 (69%)
Frame = +2 / +2
Query: 167 ASIKEDGCDVRGYFAWSLLDNWEWAAGYTSRFGLYFVDYKDNLKRYPKNSVQWFKTLLS 343
A + DG DVRGYF WSL+DN+EW GYT RFGL++VDY+ ++ +++ + + L S
Sbjct: 173 AKVIRDGADVRGYFIWSLIDNFEWTYGYTLRFGLHYVDYQTQERKPKSSALWYKRFLQS 349
Score = 59.7 bits (124), Expect(2) = 6e-025
Identities = 22/58 (37%), Positives = 37/58 (63%)
Frame = +2 / +2
Query: 8 KLMNYVKERYNSPTVYITENGMDDGNSPFTSIQDALKDSKRIKYHNGYLNNVAASIKE 181
K++ Y+ +RYN+ ++ITENG G + ++D L D RI+Y +GYL +A I++
Sbjct: 17 KMVTYIMKRYNNLPMFITENGYAQGGVGYNQVEDWLDDQSRIQYLDGYLTKLAKVIRD 190
>gb|CX609381.1|CX609381 ANR1_12_H02.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_12_H02_A002 3', mRNA sequence
Length = 743
Score = 73.5 bits (154), Expect(2) = 7e-024
Identities = 26/53 (49%), Positives = 34/53 (64%)
Frame = +2 / +1
Query: 182 DGCDVRGYFAWSLLDNWEWAAGYTSRFGLYFVDYKDNLKRYPKNSVQWFKTLL 340
DG +V+GYF W+ +D +EW GY RFGL F+D + LKRY K S W + L
Sbjct: 247 DGVNVKGYFTWTFMDCFEWGDGYLDRFGLIFIDRLNGLKRYRKESSYWIQNFL 405
Score = 58.3 bits (121), Expect(2) = 7e-024
Identities = 22/59 (37%), Positives = 39/59 (66%)
Frame = +2 / +1
Query: 5 RKLMNYVKERYNSPTVYITENGMDDGNSPFTSIQDALKDSKRIKYHNGYLNNVAASIKE 181
R+L+ Y RY SP +Y+TENG+ + N+ ++ AL+D RI++H+ +L V +I++
Sbjct: 73 RELLLYTSRRYGSPVLYVTENGIAEENNRTIPLEVALRDGHRIRFHSQHLQFVNHAIRD 249
>gb|CN128906.1|CN128906 RHOH1_32_G07.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_32_G07_A002 3', mRNA sequence
Length = 735
Score = 73.5 bits (154), Expect(2) = 7e-024
Identities = 26/53 (49%), Positives = 34/53 (64%)
Frame = +2 / +2
Query: 182 DGCDVRGYFAWSLLDNWEWAAGYTSRFGLYFVDYKDNLKRYPKNSVQWFKTLL 340
DG +V+GYF W+ +D +EW GY RFGL F+D + LKRY K S W + L
Sbjct: 230 DGVNVKGYFTWTFMDCFEWGDGYLDRFGLIFIDRLNGLKRYRKESSYWIQNFL 388
Score = 58.3 bits (121), Expect(2) = 7e-024
Identities = 22/59 (37%), Positives = 39/59 (66%)
Frame = +2 / +2
Query: 5 RKLMNYVKERYNSPTVYITENGMDDGNSPFTSIQDALKDSKRIKYHNGYLNNVAASIKE 181
R+L+ Y RY SP +Y+TENG+ + N+ ++ AL+D RI++H+ +L V +I++
Sbjct: 56 RELLLYTSRRYGSPVLYVTENGIAEENNRTIPLEVALRDGHRIRFHSQHLQFVNHAIRD 232
>gb|CN128151.1|CN128151 RHOH1_27_H01.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_27_H01_A002 3', mRNA sequence
Length = 687
Score = 73.5 bits (154), Expect(2) = 7e-024
Identities = 26/53 (49%), Positives = 34/53 (64%)
Frame = +2 / +3
Query: 182 DGCDVRGYFAWSLLDNWEWAAGYTSRFGLYFVDYKDNLKRYPKNSVQWFKTLL 340
DG +V+GYF W+ +D +EW GY RFGL F+D + LKRY K S W + L
Sbjct: 192 DGVNVKGYFTWTFMDCFEWGDGYLDRFGLIFIDRLNGLKRYRKESSYWIQNFL 350
Score = 58.3 bits (121), Expect(2) = 7e-024
Identities = 22/59 (37%), Positives = 39/59 (66%)
Frame = +2 / +3
Query: 5 RKLMNYVKERYNSPTVYITENGMDDGNSPFTSIQDALKDSKRIKYHNGYLNNVAASIKE 181
R+L+ Y RY SP +Y+TENG+ + N+ ++ AL+D RI++H+ +L V +I++
Sbjct: 18 RELLLYTSRRYGSPVLYVTENGIAEENNRTIPLEVALRDGHRIRFHSQHLQFVNHAIRD 194
>gb|CL177642.1|CL177642 104_385_10893973_148_31913_037 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10893973, DNA
sequence
Length = 624
Score = 73.5 bits (154), Expect(2) = 7e-024
Identities = 26/53 (49%), Positives = 34/53 (64%)
Frame = +2 / -1
Query: 182 DGCDVRGYFAWSLLDNWEWAAGYTSRFGLYFVDYKDNLKRYPKNSVQWFKTLL 340
DG +V+GYF W+ +D +EW GY RFGL F+D + LKRY K S W + L
Sbjct: 318 DGVNVKGYFTWTFMDCFEWGDGYLDRFGLIFIDRLNGLKRYRKESSYWIQNFL 160
Score = 58.3 bits (121), Expect(2) = 7e-024
Identities = 22/59 (37%), Positives = 39/59 (66%)
Frame = +2 / -1
Query: 5 RKLMNYVKERYNSPTVYITENGMDDGNSPFTSIQDALKDSKRIKYHNGYLNNVAASIKE 181
R+L+ Y RY SP +Y+TENG+ + N+ ++ AL+D RI++H+ +L V +I++
Sbjct: 492 RELLLYTSRRYGSPVLYVTENGIAEENNRTIPLEVALRDGHRIRFHSQHLQFVNHAIRD 316
>gb|CF771891.1|CF771891 DSBF1_25_F02.g1_A010 Drought-stressed before flowering Sorghum
bicolor cDNA clone DSBF1_25_F02_A010 3', mRNA sequence
Length = 459
Score = 75.8 bits (159), Expect(2) = 1e-023
Identities = 28/59 (47%), Positives = 41/59 (69%)
Frame = +2 / +1
Query: 167 ASIKEDGCDVRGYFAWSLLDNWEWAAGYTSRFGLYFVDYKDNLKRYPKNSVQWFKTLLS 343
A + DG DVRGYF WSL+DN+EW GYT RFGL++VDY+ ++ +++ + + L S
Sbjct: 136 AKVIRDGADVRGYFVWSLIDNFEWLYGYTLRFGLHYVDYQTQERKPKSSALWYKRFLQS 312
Score = 55.1 bits (114), Expect(2) = 1e-023
Identities = 21/51 (41%), Positives = 34/51 (66%)
Frame = +2 / +1
Query: 29 ERYNSPTVYITENGMDDGNSPFTSIQDALKDSKRIKYHNGYLNNVAASIKE 181
+RYN+ ++ITENG G +T+++D L D RI+Y +GYL +A I++
Sbjct: 1 KRYNNLPMFITENGYAQGGDSYTNVEDWLDDQGRIQYLDGYLTKLAKVIRD 153
>gb|BI075756.1|BI075756 IP1_24_G09.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 495
Score = 110 bits (234), Expect = 3e-023
Identities = 37/58 (63%), Positives = 49/58 (84%)
Frame = +2 / +1
Query: 170 SIKEDGCDVRGYFAWSLLDNWEWAAGYTSRFGLYFVDYKDNLKRYPKNSVQWFKTLLS 343
+I+++GC+V GYF WSLLDNWEW +GYT RFGLY++DY +NL R PK SV+WFK +L+
Sbjct: 4 AIRKEGCNVHGYFVWSLLDNWEWNSGYTVRFGLYYIDYNNNLTRIPKASVEWFKQVLA 177
>gb|CW110613.1|CW110613 104_483_11103812_148_34522_072 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11103812, DNA
sequence
Length = 644
Score = 87.7 bits (185), Expect(2) = 3e-023
Identities = 30/43 (69%), Positives = 36/43 (83%)
Frame = +2 / -1
Query: 182 DGCDVRGYFAWSLLDNWEWAAGYTSRFGLYFVDYKDNLKRYPK 310
DG D+RGYFAWS LDN+EWA GYT RFG+ +VDYK+ L R+PK
Sbjct: 131 DGADIRGYFAWSFLDNFEWAMGYTKRFGIVYVDYKNGLSRHPK 3
Score = 41.8 bits (85), Expect(2) = 3e-023
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +2 / -3
Query: 68 GMDDGNSPFTSIQDALKDSKRIKYHNGYLNNVAASIK 178
GMDD + ++ L D+ R+ Y GYLN+VA +IK
Sbjct: 357 GMDDEDDQSATLDQVLNDTTRVGYFKGYLNSVAQAIK 247
>gb|CN144836.1|CN144836 WOUND1_25_F02.b2_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_25_F02_A002 3', mRNA sequence
Length = 728
Score = 74.8 bits (157), Expect(2) = 4e-023
Identities = 28/40 (70%), Positives = 31/40 (77%)
Frame = +2 / +1
Query: 167 ASIKEDGCDVRGYFAWSLLDNWEWAAGYTSRFGLYFVDYK 286
AS G DVRGYF WSLLDN+EW +GYT RFGLY VD+K
Sbjct: 415 ASAIRKGADVRGYFVWSLLDNFEWNSGYTQRFGLYHVDFK 534
Score = 54.2 bits (112), Expect(2) = 4e-023
Identities = 22/58 (37%), Positives = 36/58 (62%)
Frame = +2 / +1
Query: 8 KLMNYVKERYNSPTVYITENGMDDGNSPFTSIQDALKDSKRIKYHNGYLNNVAASIKE 181
K++ Y K RYN+ +YITENG ++ S +D D+ R+ Y GYL +A++I++
Sbjct: 259 KVVMYFKRRYNNTPMYITENGYAQASNSNMSAKDFTNDTGRVDYLQGYLTFLASAIRK 432
>gb|CX607339.1|CX607339 ANR1_8_B05.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_8_B05_A002 3', mRNA sequence
Length = 747
Score = 73.5 bits (154), Expect(2) = 6e-023
Identities = 26/53 (49%), Positives = 34/53 (64%)
Frame = +2 / +3
Query: 182 DGCDVRGYFAWSLLDNWEWAAGYTSRFGLYFVDYKDNLKRYPKNSVQWFKTLL 340
DG +V+GYF W+ +D +EW GY RFGL F+D + LKRY K S W + L
Sbjct: 192 DGVNVKGYFTWTFMDCFEWGDGYLDRFGLIFIDRLNGLKRYRKESSYWIQNFL 350
Score = 55.1 bits (114), Expect(2) = 6e-023
Identities = 21/59 (35%), Positives = 38/59 (64%)
Frame = +2 / +3
Query: 5 RKLMNYVKERYNSPTVYITENGMDDGNSPFTSIQDALKDSKRIKYHNGYLNNVAASIKE 181
R+L+ Y RY SP +Y+TENG+ + N+ ++ AL+ RI++H+ +L V +I++
Sbjct: 18 RELLLYTSRRYGSPVLYVTENGIAEENNRTIPLEVALRGGHRIRFHSQHLQFVNHAIRD 194
>gb|BG158722.1|BG158722 RHIZ2_44_D05.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 540
Score = 73.0 bits (153), Expect(3) = 8e-023
Identities = 27/36 (75%), Positives = 30/36 (83%)
Frame = +2 / +2
Query: 179 EDGCDVRGYFAWSLLDNWEWAAGYTSRFGLYFVDYK 286
+DG V GYFAWSLLDN+EW GYTSRFGL +VDYK
Sbjct: 236 DDGARVIGYFAWSLLDNFEWRLGYTSRFGLVYVDYK 343
Score = 40.0 bits (81), Expect(3) = 8e-023
Identities = 14/23 (60%), Positives = 18/23 (78%)
Frame = +2 / +2
Query: 8 KLMNYVKERYNSPTVYITENGMD 76
K +NYVKE Y +PT+ + ENGMD
Sbjct: 74 KAVNYVKETYENPTMILAENGMD 142
Score = 32.7 bits (65), Expect(3) = 8e-023
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = +2 / +2
Query: 293 LKRYPKNSVQWFKTLLS 343
LKRYPK+S WFK +LS
Sbjct: 347 LKRYPKDSAFWFKHMLS 397
>gb|BE596935.1|BE596935 PI1_60_D01.g1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 678
Score = 62.0 bits (129), Expect(3) = 1e-022
Identities = 24/39 (61%), Positives = 28/39 (71%)
Frame = +2 / +2
Query: 167 ASIKEDGCDVRGYFAWSLLDNWEWAAGYTSRFGLYFVDY 283
AS +G DVRGYF WSLLD +EW +GYT R GL VD+
Sbjct: 179 ASAIRNGADVRGYFIWSLLDCFEWTSGYTLRLGLCHVDF 295
Score = 56.5 bits (117), Expect(3) = 1e-022
Identities = 23/57 (40%), Positives = 36/57 (63%)
Frame = +2 / +2
Query: 8 KLMNYVKERYNSPTVYITENGMDDGNSPFTSIQDALKDSKRIKYHNGYLNNVAASIK 178
+++ Y KERYN+ +YITENG G++ S +D D+ RI Y YL +A++I+
Sbjct: 23 QVVMYYKERYNNTPIYITENGYAQGSNSSMSAKDFTNDTPRINYIRDYLTFLASAIR 193
Score = 26.7 bits (52), Expect(3) = 1e-022
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +2 / +2
Query: 287 DNLKRYPKNSVQWFKTLLSSS 349
+ LKR PK S WF+ L S
Sbjct: 296 NTLKRTPKLSANWFRKFLKGS 358
>gb|CX616694.1|CX616694 GABR1_29_H08.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_29_H08_A002 3', mRNA sequence
Length = 622
Score = 73.5 bits (154), Expect(2) = 1e-022
Identities = 26/53 (49%), Positives = 34/53 (64%)
Frame = +2 / +2
Query: 182 DGCDVRGYFAWSLLDNWEWAAGYTSRFGLYFVDYKDNLKRYPKNSVQWFKTLL 340
DG +V+GYF W+ +D +EW GY RFGL F+D + LKRY K S W + L
Sbjct: 161 DGVNVKGYFTWTFMDCFEWGDGYLDRFGLIFIDRLNGLKRYRKESSYWIQNFL 319
Score = 54.2 bits (112), Expect(2) = 1e-022
Identities = 20/54 (37%), Positives = 35/54 (64%)
Frame = +2 / +2
Query: 20 YVKERYNSPTVYITENGMDDGNSPFTSIQDALKDSKRIKYHNGYLNNVAASIKE 181
Y RY SP +Y+TENG+ + N+ ++ AL+D RI++H+ +L V +I++
Sbjct: 2 YTSRRYGSPVLYVTENGIAEENNRTIPLEVALRDGHRIRFHSQHLQFVNHAIRD 163
>gb|CN151024.1|CN151024 WOUND1_73_B01.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_73_B01_A002 3', mRNA sequence
Length = 808
Score = 80.3 bits (169), Expect(2) = 2e-022
Identities = 28/51 (54%), Positives = 39/51 (76%)
Frame = +2 / +3
Query: 179 EDGCDVRGYFAWSLLDNWEWAAGYTSRFGLYFVDYKDNLKRYPKNSVQWFK 331
+ G +VRG+FAWSLLDN+EW++GYT RFG+ +VD ++ KR K S +W K
Sbjct: 456 DSGANVRGHFAWSLLDNFEWSSGYTERFGIIYVDRENGCKRTLKRSARWLK 608
Score = 46.9 bits (96), Expect(2) = 2e-022
Identities = 21/57 (36%), Positives = 35/57 (61%)
Frame = +2 / +3
Query: 5 RKLMNYVKERYNSPTVYITENGMDDGNSPFTSIQDALKDSKRIKYHNGYLNNVAASI 175
+ ++ K+RY +P VYITENGM D ++ S++ AL D R+ Y +++ + SI
Sbjct: 285 KDILMITKKRYGNPPVYITENGMGDIDNGDLSMEAALDDHIRLDYLQRHISVLKDSI 455
>gb|CN143409.1|CN143409 WOUND1_16_C08.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_16_C08_A002 3', mRNA sequence
Length = 691
Score = 72.5 bits (152), Expect(3) = 2e-022
Identities = 23/34 (67%), Positives = 31/34 (91%)
Frame = +2 / +2
Query: 185 GCDVRGYFAWSLLDNWEWAAGYTSRFGLYFVDYK 286
G DVRGYF WSL+DN+EW +GYT+++GLY+VD+K
Sbjct: 317 GADVRGYFVWSLMDNFEWLSGYTTKYGLYYVDFK 418
Score = 49.2 bits (101), Expect(3) = 2e-022
Identities = 20/58 (34%), Positives = 36/58 (62%)
Frame = +2 / +2
Query: 8 KLMNYVKERYNSPTVYITENGMDDGNSPFTSIQDALKDSKRIKYHNGYLNNVAASIKE 181
KL+ Y+K+RY S +YITENG + T ++ + D++R Y + YL ++ +I++
Sbjct: 143 KLVMYLKQRYKSIPLYITENGYAQIGNSSTPTEELINDTERSSYIHDYLTYLSLAIRK 316
Score = 22.6 bits (43), Expect(3) = 2e-022
Identities = 7/20 (35%), Positives = 12/20 (60%)
Frame = +2 / +2
Query: 290 NLKRYPKNSVQWFKTLLSSS 349
+LKR PK S +W+ + +
Sbjct: 419 SLKRTPKLSAKWYSKFIKGN 478
>gb|CW143524.1|CW143524 104_535_11137466_148_34959_009 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11137466, DNA
sequence
Length = 694
Score = 106 bits (227), Expect = 3e-022
Identities = 38/53 (71%), Positives = 44/53 (83%)
Frame = +2 / -3
Query: 182 DGCDVRGYFAWSLLDNWEWAAGYTSRFGLYFVDYKDNLKRYPKNSVQWFKTLL 340
DG +V+GYFAWSLLDN+EWA+GYT RFG+YFVDY D LKRYPK+S WF L
Sbjct: 542 DGANVKGYFAWSLLDNFEWASGYTVRFGIYFVDYNDGLKRYPKSSAHWFTEFL 384
>gb|AF253508.1|AF253508 Sorghum bicolor cyanogenic beta-glucosidase dhurrinase-2 mRNA,
complete cds
Length = 1935
Score = 78.5 bits (165), Expect(2) = 4e-022
Identities = 27/51 (52%), Positives = 38/51 (74%)
Frame = +2 / +2
Query: 179 EDGCDVRGYFAWSLLDNWEWAAGYTSRFGLYFVDYKDNLKRYPKNSVQWFK 331
+ G +VRG+F WSLLDN+EW++GYT RFG+ +VD ++ KR K S +W K
Sbjct: 1520 DSGANVRGHFTWSLLDNFEWSSGYTERFGIVYVDRENGCKRTLKRSARWLK 1672
Score = 47.3 bits (97), Expect(2) = 4e-022
Identities = 21/57 (36%), Positives = 36/57 (63%)
Frame = +2 / +2
Query: 5 RKLMNYVKERYNSPTVYITENGMDDGNSPFTSIQDALKDSKRIKYHNGYLNNVAASI 175
+ ++ +K+RY +P VYITENGM D ++ S++ AL D R+ Y +++ + SI
Sbjct: 1349 KDILMIMKKRYGNPPVYITENGMGDIDNGDLSMEAALDDHIRLDYLQRHISVLKDSI 1519
>gb|BG102626.1|BG102626 RHIZ2_35_C12.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 692
Score = 78.5 bits (165), Expect(2) = 4e-022
Identities = 27/51 (52%), Positives = 38/51 (74%)
Frame = +2 / +1
Query: 179 EDGCDVRGYFAWSLLDNWEWAAGYTSRFGLYFVDYKDNLKRYPKNSVQWFK 331
+ G +VRG+F WSLLDN+EW++GYT RFG+ +VD ++ KR K S +W K
Sbjct: 358 DSGANVRGHFTWSLLDNFEWSSGYTERFGIVYVDRENGCKRTLKRSARWLK 510
Score = 47.3 bits (97), Expect(2) = 4e-022
Identities = 21/57 (36%), Positives = 36/57 (63%)
Frame = +2 / +1
Query: 5 RKLMNYVKERYNSPTVYITENGMDDGNSPFTSIQDALKDSKRIKYHNGYLNNVAASI 175
+ ++ +K+RY +P VYITENGM D ++ S++ AL D R+ Y +++ + SI
Sbjct: 187 KDILMIMKKRYGNPPVYITENGMGDIDNGDLSMEAALDDHIRLDYLQRHISVLKDSI 357
>gb|BG051974.1|BG051974 RHIZ2_7_C12.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 686
Score = 78.5 bits (165), Expect(2) = 4e-022
Identities = 27/51 (52%), Positives = 38/51 (74%)
Frame = +2 / +2
Query: 179 EDGCDVRGYFAWSLLDNWEWAAGYTSRFGLYFVDYKDNLKRYPKNSVQWFK 331
+ G +VRG+F WSLLDN+EW++GYT RFG+ +VD ++ KR K S +W K
Sbjct: 380 DSGANVRGHFTWSLLDNFEWSSGYTERFGIVYVDRENGCKRTLKRSARWLK 532
Score = 47.3 bits (97), Expect(2) = 4e-022
Identities = 21/57 (36%), Positives = 36/57 (63%)
Frame = +2 / +2
Query: 5 RKLMNYVKERYNSPTVYITENGMDDGNSPFTSIQDALKDSKRIKYHNGYLNNVAASI 175
+ ++ +K+RY +P VYITENGM D ++ S++ AL D R+ Y +++ + SI
Sbjct: 209 KDILMIMKKRYGNPPVYITENGMGDIDNGDLSMEAALDDHIRLDYLQRHISVLKDSI 379
>gb|BF480877.1|BF480877 FM1_14_D08.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 681
Score = 78.5 bits (165), Expect(2) = 4e-022
Identities = 27/51 (52%), Positives = 38/51 (74%)
Frame = +2 / +1
Query: 179 EDGCDVRGYFAWSLLDNWEWAAGYTSRFGLYFVDYKDNLKRYPKNSVQWFK 331
+ G +VRG+F WSLLDN+EW++GYT RFG+ +VD ++ KR K S +W K
Sbjct: 391 DSGANVRGHFTWSLLDNFEWSSGYTERFGIVYVDRENGCKRTLKRSARWLK 543
Score = 47.3 bits (97), Expect(2) = 4e-022
Identities = 21/57 (36%), Positives = 36/57 (63%)
Frame = +2 / +1
Query: 5 RKLMNYVKERYNSPTVYITENGMDDGNSPFTSIQDALKDSKRIKYHNGYLNNVAASI 175
+ ++ +K+RY +P VYITENGM D ++ S++ AL D R+ Y +++ + SI
Sbjct: 220 KDILMIMKKRYGNPPVYITENGMGDIDNGDLSMEAALDDHIRLDYLQRHISVLKDSI 390
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 658,223,253
Number of Sequences: 832831
Number of extensions: 7521277
Number of successful extensions: 70921
Number of sequences better than 1.0e-020: 186
length of database: 163,786,556
effective HSP length: 54
effective length of database: 118,813,682
effective search space used: 22455785898
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)