TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2419390.2.1
(1603 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BF587835.1|BF587835 FM1_33_G06.g1_A003 Floral-Induced Me... 347 7e-098
gb|BG356900.1|BG356900 OV2_11_D08.g1_A002 Ovary 2 (OV2) Sor... 348 1e-094
gb|CW458016.1|CW458016 fsbb001f204b14f0 Sorghum methylation... 177 1e-086
gb|BG240756.1|BG240756 OV1_37_H04.g1_A002 Ovary 1 (OV1) Sor... 286 1e-079
gb|CW177944.1|CW177944 104_591_11159301_116_36607_087 Sorgh... 138 7e-077
gb|BZ348728.1|BZ348728 hp60e11.g2 WGS-SbicolorF (JM107 adap... 110 1e-063
gb|CW458017.1|CW458017 fsbb001f204b14k0 Sorghum methylation... 110 1e-061
gb|CW135163.1|CW135163 104_519_11117699_148_34826_038 Sorgh... 177 7e-053
gb|CW135162.1|CW135162 104_519_11117699_116_34830_038 Sorgh... 177 2e-052
gb|CW413938.1|CW413938 fsbb001f113f13k0 Sorghum methylation... 177 3e-050
gb|CW086376.1|CW086376 104_430_10946936_116_33018_028 Sorgh... 114 2e-041
gb|CW291515.1|CW291515 104_771_11413593_148_35573_043 Sorgh... 114 2e-041
gb|CW155872.1|CW155872 104_558_11146371_116_36363_006 Sorgh... 105 5e-039
gb|CW086375.1|CW086375 104_430_10946936_114_33015_028 Sorgh... 103 3e-038
gb|CW177945.1|CW177945 104_591_11159301_148_36608_087 Sorgh... 102 2e-037
gb|CW291514.1|CW291514 104_771_11413593_116_35569_043 Sorgh... 98 1e-036
gb|CW228616.1|CW228616 104_668_11206476_148_37249_038 Sorgh... 101 3e-021
gb|CL156768.1|CL156768 104_344_10783092_116_31374_036 Sorgh... 70 6e-021
>gb|BF587835.1|BF587835 FM1_33_G06.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 607
Score = 347 bits (753), Expect(3) = 7e-098
Identities = 139/149 (93%), Positives = 145/149 (97%)
Frame = -1 / +1
Query: 862 TCNKKVTEAFGSGYWCEGCQKNDSECSLRYIMVIKLSDPTGEAWVSVFNEHAEKIIGCSA 683
TCNKKVTEAFGSGYWCEGCQKNDSECSLRYIMV+K+SDPTGEAWVSVFNEHAEKIIGCSA
Sbjct: 1 TCNKKVTEAFGSGYWCEGCQKNDSECSLRYIMVLKISDPTGEAWVSVFNEHAEKIIGCSA 180
Query: 682 DELDRIRKEEGDDSYVLKLKEATWVPHLFRVSVTQHEYMNEKRQRITVRGEAPVDFAAES 503
DELDRIRKEEGDDSYVLKLKEATWVPHLFRVSVTQHEYMNEKRQRITVR EAPVD+AAES
Sbjct: 181 DELDRIRKEEGDDSYVLKLKEATWVPHLFRVSVTQHEYMNEKRQRITVRSEAPVDYAAES 360
Query: 502 KYLLEEIAKLTAC*KTQSFWWFLKDWPPM 416
KYLLEEIAKLTAC*K QSFWWF+K+ P+
Sbjct: 361 KYLLEEIAKLTAC*KMQSFWWFVKEDWPL 447
Score = 279 bits (603), Expect(3) = 4e-078
Identities = 118/145 (81%), Positives = 125/145 (86%)
Frame = +2 / -2
Query: 428 VLQEPPERLRLLASGELRDLFKQVLGLSCEVDRCFTPHGDSLPLLVHVFMLCDADAEQVR 607
+L EPPERL LLAS +LRDLFKQVLG SC VDRCFTPHGD LP LVHVFMLCDADAE+VR
Sbjct: 435 LLHEPPERLHLLASSKLRDLFKQVLGFSCIVDRCFTPHGDPLPFLVHVFMLCDADAEKVR 256
Query: 608 NPGGFLELENVAVVPLLFPDPIKLVGAAANDLLRMLVEHGHPSLTSGIGELDHHDVSQRA 787
NPGGFLELENV V+ LLFPDPIKLV AAANDLL MLVEHGHP LTSGI +L+ HDVSQ A
Sbjct: 255 NPGGFLELENVTVIALLFPDPIKLVSAAANDLLGMLVEHGHPCLTSGIRDLEDHDVSQ*A 76
Query: 788 LRVILLAPLAPVSRPKSFSHLLVTG 862
RV+LLA L PVSR KSFSHLLV G
Sbjct: 75 FRVVLLASLTPVSRSKSFSHLLVAG 1
Score = 263 bits (568), Expect(2) = 9e-072
Identities = 117/142 (82%), Positives = 126/142 (88%)
Frame = -3 / +3
Query: 854 QEGD*SFWVWILVRGVPKE*L*VLAEIHHGDQALRSHW*GLGVRVQRACGEDHWLQRRRA 675
QEGD*SFW+WILV G+PKE L*+L EIHHG Q L SHW*G+GVRVQRAC EDHWLQR RA
Sbjct: 9 QEGD*SFWIWILV*GMPKERL*MLTEIHHGPQDL*SHW*GMGVRVQRACREDHWLQR*RA 188
Query: 674 *SDQERGGGRQLRSQAQGSHLGSSPVPRQRHTA*IHEREEAENHREG*STGRLRS*VQVL 495
*SDQERGG QLRSQAQGSHLGSSP PRQRHTA*IHERE+AE+HRE *STGRL S*+QV
Sbjct: 189 *SDQERGGR*QLRSQAQGSHLGSSPFPRQRHTA*IHEREKAEDHREE*STGRLCS*IQVP 368
Query: 494 A*RDREAHRLLEDAVFLVVLEG 429
A*RDREA+ LLEDA+FLVV EG
Sbjct: 369 A*RDREAYCLLEDAIFLVVREG 434
Score = 259 bits (560), Expect(3) = 2e-071
Identities = 113/147 (76%), Positives = 115/147 (78%)
Frame = +3 / -3
Query: 420 GGQSFKNHQKDCVF*QAVSFAISSSKYLDSAAKSTGASPLTVILCLFSFMYSCCVTLTRN 599
G SF NHQKDC+F*QAVSFAISSS+YLDSAA STGAS LTVILCLFSFMYSCCVTLTR
Sbjct: 443 GQSSFTNHQKDCIF*QAVSFAISSSRYLDSAA*STGASLLTVILCLFSFMYSCCVTLTRK 264
Query: 600 R*GTQVAXXXXXXXXXXXXXXXXXXXXXXXQPMIFSACSLNTDTQASPVGSESLITMMYL 779
R*GTQVA QPMIFSACSLNTDT ASPVGSE L TMMYL
Sbjct: 263 R*GTQVASLSLRT*LSSPSSFLIRSSSSALQPMIFSACSLNTDTHASPVGSEILRTMMYL 84
Query: 780 SEHSESFFWHPSHQYPDPKASVTFLLQ 860
SEHSESFFWHPSHQYPDPKASVTFLLQ
Sbjct: 83 SEHSESFFWHPSHQYPDPKASVTFLLQ 3
Score = 231 bits (499), Expect(2) = 1e-060
Identities = 102/125 (81%), Positives = 106/125 (84%)
Frame = +1 / -1
Query: 487 LQASTWTQLRSRPVLHPSR*FSASSRSCIHAV*R*RGTGEEPRWLP*A*ERSCRPPPLS* 666
LQA TW QL SRPVLH SR* SA SRSCIHAV*R*RG GEEPRWLP*A*ER+C PPLS*
Sbjct: 376 LQAGTWIQLHSRPVLHSSR*SSAFSRSCIHAV*R*RGKGEEPRWLP*A*ERNCHRPPLS* 197
Query: 667 SDQARRRCSQ*SSPHAR*TRTPKPHQWDRRA*SP*CISASTQSHSFGTPRTSIQTQKLQS 846
SDQAR+RCSQ*SS HAR*TRTP PHQWD+R+* P*CIS S QS SFG P TSIQ QKLQS
Sbjct: 196 SDQARQRCSQ*SSRHAR*TRTPMPHQWDQRS*GP*CISVSIQSRSFGIPHTSIQIQKLQS 17
Query: 847 PSCYR 861
PSC R
Sbjct: 16 PSCCR 2
Score = 219 bits (472), Expect(2) = 1e-057
Identities = 101/125 (80%), Positives = 104/125 (83%)
Frame = -2 / +2
Query: 861 PVTRR*LKLLGLDTGARGAKRMTLSAR*DTXXXXXSPIPLVRLGCPCSTSMRRRSLAAAP 682
P TRR*LKLL LDTG R AKR TL+A *DT S IPLVR GCPCSTSM RRSLAAA
Sbjct: 2 PATRR*LKLLDLDTGVRDAKRTTLNAH*DTSWSSRSLIPLVRHGCPCSTSMPRRSLAAAL 181
Query: 681 TSLIGSGKRRGTTATFSSSRKPPGFLTCSASASHSMNT*TRRGRESP*GVKHRSTSQLSP 502
TSLIGSGKRR T TFSSSRKPPGFLT SASASHSMNT*TR+GR SP*GVKHRST QL+P
Sbjct: 182 TSLIGSGKRRAMTVTFSSSRKPPGFLTFSASASHSMNT*TRKGRGSP*GVKHRSTMQLNP 361
Query: 501 STCLK 487
STCLK
Sbjct: 362 STCLK 376
Score = 30.4 bits (60), Expect(2) = 9e-072
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = -3 / +3
Query: 377 ITVLCVALTGF*HFCKV 327
+ + CVAL G *HFCK+
Sbjct: 486 LLLFCVALIGL*HFCKI 536
Score = 29.0 bits (57), Expect(3) = 7e-098
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = -2 / +2
Query: 366 VCCSHWVLALL* 331
+CCSHW LALL*
Sbjct: 497 LCCSHWSLALL* 532
Score = 28.6 bits (56), Expect(3) = 4e-078
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = +3 / -3
Query: 327 YLTEVLKPSESNTQ 368
YLTEVLK +ESNT+
Sbjct: 536 YLTEVLKTNESNTE 495
Score = 28.1 bits (55), Expect(3) = 2e-071
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +2 / -2
Query: 320 LHIPYRSAKTQ*EQH 364
++I YRSAK Q*EQH
Sbjct: 543 IYISYRSAKDQ*EQH 499
Score = 27.2 bits (53), Expect(2) = 1e-057
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = -1 / +1
Query: 364 VLLSLGFSTSVRYM 323
VLLSL FSTSVRY+
Sbjct: 499 VLLSLVFSTSVRYV 540
Score = 25.8 bits (50), Expect(3) = 4e-078
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = +1 / -2
Query: 364 HRTVIKLLELK 396
HRTVIKLL+LK
Sbjct: 501 HRTVIKLLQLK 469
Score = 24.9 bits (48), Expect(2) = 1e-060
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +1 / -1
Query: 325 YTLQKC*NPVRATHRT 372
+ LQKC* P+RAT +
Sbjct: 538 HILQKC*RPMRATQNS 491
Score = 23.5 bits (45), Expect(3) = 2e-071
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +2 / -3
Query: 356 EQHTEQ*SSYWSSKEKLRGRHRG 424
E +TEQ* SY+SSK RG
Sbjct: 509 ESNTEQ**SYYSSKPLRGNHIRG 441
Score = 23.1 bits (44), Expect(3) = 7e-098
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = -1 / +3
Query: 397 F*APVT*LLFCVLL 356
F*A VT LLFCV L
Sbjct: 468 F*AVVTLLLFCVAL 509
>gb|BG356900.1|BG356900 OV2_11_D08.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 463
Score = 348 bits (754), Expect = 1e-094
Identities = 137/147 (93%), Positives = 142/147 (96%)
Frame = -1 / +3
Query: 949 GQEKPVFFSLYAIISHIKPDQNMWYRACTTCNKKVTEAFGSGYWCEGCQKNDSECSLRYI 770
GQEKPVFFSL AIISHIKPDQNMWYRAC TCNKKVTEAFGSGYWCEGCQKNDSECSLRYI
Sbjct: 3 GQEKPVFFSLNAIISHIKPDQNMWYRACKTCNKKVTEAFGSGYWCEGCQKNDSECSLRYI 182
Query: 769 MVIKLSDPTGEAWVSVFNEHAEKIIGCSADELDRIRKEEGDDSYVLKLKEATWVPHLFRV 590
MV+K+SDPTGEAWVSVFNEHAEKIIGCSADELDRIRKEEGDDSY+LKLKEATWVPHLFRV
Sbjct: 183 MVLKISDPTGEAWVSVFNEHAEKIIGCSADELDRIRKEEGDDSYILKLKEATWVPHLFRV 362
Query: 589 SVTQHEYMNEKRQRITVRGEAPVDFAA 509
SVTQHEYMNEKRQRITVR EAPV+ +
Sbjct: 363 SVTQHEYMNEKRQRITVRSEAPVELCS 443
Score = 277 bits (600), Expect = 3e-073
Identities = 118/144 (81%), Positives = 125/144 (86%)
Frame = -3 / +2
Query: 950 GPGKACFLQSVCHHKPHQA*SEYVVPCLHDL*QEGD*SFWVWILVRGVPKE*L*VLAEIH 771
GPGKACFLQ CHHKPHQA* EYVVPCL DL QEGD*SFW+WILV G+PKE L*+L EIH
Sbjct: 2 GPGKACFLQFKCHHKPHQA*PEYVVPCLQDLQQEGD*SFWIWILV*GMPKERL*MLTEIH 181
Query: 770 HGDQALRSHW*GLGVRVQRACGEDHWLQRRRA*SDQERGGGRQLRSQAQGSHLGSSPVPR 591
+G Q L SHW*G+GVRVQRAC EDHWLQR RA*SDQERGG QL SQAQGSHLGSSP PR
Sbjct: 182 NGPQDL*SHW*GMGVRVQRAC*EDHWLQR*RA*SDQERGGR*QLHSQAQGSHLGSSPFPR 361
Query: 590 QRHTA*IHEREEAENHREG*STGR 519
QRH A*IHERE+AE+HRE *STGR
Sbjct: 362 QRHAA*IHEREKAEDHREE*STGR 433
Score = 274 bits (592), Expect = 3e-072
Identities = 118/143 (82%), Positives = 124/143 (86%)
Frame = +2 / -3
Query: 521 DRCFTPHGDSLPLLVHVFMLCDADAEQVRNPGGFLELENVAVVPLLFPDPIKLVGAAAND 700
DRCFTPHGD LP LVHVFML DADAE+VRNPGGFLELENV V+ LLFPDPIKLV AAAND
Sbjct: 431 DRCFTPHGDPLPFLVHVFMLRDADAEKVRNPGGFLELENVTVIALLFPDPIKLVSAAAND 252
Query: 701 LLRMLVEHGHPSLTSGIGELDHHDVSQRALRVILLAPLAPVSRPKSFSHLLVTGRASTVP 880
LL MLVEHGHP LTSGI +L+ H VSQ A RV+LLA L PVSR KSFSHLLV G ASTVP
Sbjct: 251 LLSMLVEHGHPCLTSGIRDLEDHYVSQ*AFRVVLLASLTPVSRSKSFSHLLVAGLASTVP 72
Query: 881 HILIRLDVAYDGIQTEENRLFLA 949
HIL+RLDVAYDGI TEENRLFLA
Sbjct: 71 HILVRLDVAYDGI*TEENRLFLA 3
Score = 272 bits (589), Expect = 9e-072
Identities = 118/144 (81%), Positives = 123/144 (85%)
Frame = +1 / -2
Query: 520 RPVLHPSR*FSASSRSCIHAV*R*RGTGEEPRWLP*A*ERSCRPPPLS*SDQARRRCSQ* 699
RPVLH SR* SA SRSCIHA *R*RG GEEPRWLP*A*E +C PPLS*SDQAR+RCSQ*
Sbjct: 432 RPVLHSSR*SSAFSRSCIHAA*R*RGKGEEPRWLP*A*ECNCHRPPLS*SDQARQRCSQ* 253
Query: 700 SSPHAR*TRTPKPHQWDRRA*SP*CISASTQSHSFGTPRTSIQTQKLQSPSCYRSCKHGT 879
SS HAR*TRTP PHQWD+R+* P CIS S QS SFG P TSIQ QKLQSPSC RSCKHGT
Sbjct: 252 SSQHAR*TRTPMPHQWDQRS*GPLCISVSIQSRSFGIPHTSIQIQKLQSPSCCRSCKHGT 73
Query: 880 TYSDQA*CGL*WHTD*RKQAFPGP 951
TYS QA*CGL*WH +*RKQAFPGP
Sbjct: 72 TYSGQA*CGL*WHLN*RKQAFPGP 1
Score = 251 bits (542), Expect = 3e-065
Identities = 119/144 (82%), Positives = 121/144 (84%)
Frame = -2 / +1
Query: 951 WARKSLFSSVCMPS*ATSSLIRICGTVLARPVTRR*LKLLGLDTGARGAKRMTLSAR*DT 772
WARKSLFSSV MPS*ATSSL RICGTVLARP TRR*LKLL LDTG R AKR TL+A *DT
Sbjct: 1 WARKSLFSSV*MPS*ATSSLTRICGTVLARPATRR*LKLLDLDTGVRDAKRTTLNAH*DT 180
Query: 771 XXXXXSPIPLVRLGCPCSTSMRRRSLAAAPTSLIGSGKRRGTTATFSSSRKPPGFLTCSA 592
S IPLVR GCPCSTSM RRSLAAA TSLIGSGKRR T TFSSSRKPPGFLT SA
Sbjct: 181 *WSSRSLIPLVRHGCPCSTSMLRRSLAAALTSLIGSGKRRAMTVTFSSSRKPPGFLTFSA 360
Query: 591 SASHSMNT*TRRGRESP*GVKHRS 520
SAS SMNT*TR+GR SP*GVKHRS
Sbjct: 361 SASRSMNT*TRKGRGSP*GVKHRS 432
Score = 199 bits (428), Expect(2) = 7e-066
Identities = 79/87 (90%), Positives = 83/87 (95%)
Frame = +3 / -1
Query: 690 QPMIFSACSLNTDTQASPVGSESLITMMYLSEHSESFFWHPSHQYPDPKASVTFLLQVVQ 869
QPMIFSACSLNTDT ASPVGSE L T+MYLSEHSESFFWHPSHQYPDPKASVTFLLQV+Q
Sbjct: 262 QPMIFSACSLNTDTHASPVGSEILRTIMYLSEHSESFFWHPSHQYPDPKASVTFLLQVLQ 83
Query: 870 ARYHIF*SGLMWLMMAYRLKKTGFSWP 950
ARYHIF SGLMWLMMA++LKKTGFSWP
Sbjct: 82 ARYHIFWSGLMWLMMAFKLKKTGFSWP 2
Score = 74.8 bits (157), Expect(2) = 7e-066
Identities = 32/34 (94%), Positives = 32/34 (94%)
Frame = +3 / -1
Query: 519 STGASPLTVILCLFSFMYSCCVTLTRNR*GTQVA 620
STGAS LTVILCLFSFMYSCCVTLTR R*GTQVA
Sbjct: 433 STGASLLTVILCLFSFMYSCCVTLTRKR*GTQVA 332
>gb|CW458016.1|CW458016 fsbb001f204b14f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f204b14, DNA
sequence
Length = 738
Score = 177 bits (380), Expect(3) = 1e-086
Identities = 71/81 (87%), Positives = 77/81 (95%)
Frame = -1 / -1
Query: 658 EEGDDSYVLKLKEATWVPHLFRVSVTQHEYMNEKRQRITVRGEAPVDFAAESKYLLEEIA 479
+EGDDSY+LKLKEATWVPHLFRVSVTQHEYMNEKRQRITVR EAPVD+AAESKYLLEEIA
Sbjct: 327 QEGDDSYILKLKEATWVPHLFRVSVTQHEYMNEKRQRITVRSEAPVDYAAESKYLLEEIA 148
Query: 478 KLTAC*KTQSFWWFLKDWPPM 416
KLTAC*K QSFWWF+K+ P+
Sbjct: 147 KLTAC*KMQSFWWFVKEDWPL 85
Score = 152 bits (326), Expect(4) = 3e-079
Identities = 63/77 (81%), Positives = 67/77 (87%)
Frame = +2 / +1
Query: 428 VLQEPPERLRLLASGELRDLFKQVLGLSCEVDRCFTPHGDSLPLLVHVFMLCDADAEQVR 607
+L EPPERL LLAS +LRDLFKQVLG SC VDRCFTPHGD LP LVHVFML DADAE+VR
Sbjct: 97 LLHEPPERLHLLASSKLRDLFKQVLGFSCIVDRCFTPHGDPLPFLVHVFMLRDADAEKVR 276
Query: 608 NPGGFLELENVAVVPLL 658
NPGGFLELENV V+ LL
Sbjct: 277 NPGGFLELENVTVIALL 327
Score = 135 bits (289), Expect(3) = 2e-062
Identities = 59/67 (88%), Positives = 61/67 (91%)
Frame = +3 / +2
Query: 420 GGQSFKNHQKDCVF*QAVSFAISSSKYLDSAAKSTGASPLTVILCLFSFMYSCCVTLTRN 599
G SF NHQKDC+F*QAVSFAISSS+YLDSAA STGAS LTVILCLFSFMYSCCVTLTR
Sbjct: 89 GQSSFTNHQKDCIF*QAVSFAISSSRYLDSAA*STGASLLTVILCLFSFMYSCCVTLTRK 268
Query: 600 R*GTQVA 620
R*GTQVA
Sbjct: 269 R*GTQVA 289
Score = 132 bits (282), Expect(3) = 2e-059
Identities = 61/76 (80%), Positives = 66/76 (86%)
Frame = -3 / -3
Query: 656 GGGRQLRSQAQGSHLGSSPVPRQRHTA*IHEREEAENHREG*STGRLRS*VQVLA*RDRE 477
GG QL SQAQGSHLGSSP PRQRH A*IHERE+AE+HRE *STGRL S*+QV A*RDRE
Sbjct: 325 GGR*QLHSQAQGSHLGSSPFPRQRHAA*IHEREKAEDHREE*STGRLCS*IQVPA*RDRE 146
Query: 476 AHRLLEDAVFLVVLEG 429
A+ LLEDA+FLVV EG
Sbjct: 145 AYCLLEDAIFLVVREG 98
Score = 110 bits (234), Expect(2) = 3e-047
Identities = 48/57 (84%), Positives = 50/57 (87%)
Frame = -2 / -2
Query: 657 RRGTTATFSSSRKPPGFLTCSASASHSMNT*TRRGRESP*GVKHRSTSQLSPSTCLK 487
RR T TFSSSRKPPGFLT SASAS SMNT*TR+GR SP*GVKHRST QL+PSTCLK
Sbjct: 326 RRAMTVTFSSSRKPPGFLTFSASASRSMNT*TRKGRGSP*GVKHRSTMQLNPSTCLK 156
Score = 102 bits (217), Expect(3) = 6e-045
Identities = 45/57 (78%), Positives = 46/57 (80%)
Frame = +1 / +3
Query: 487 LQASTWTQLRSRPVLHPSR*FSASSRSCIHAV*R*RGTGEEPRWLP*A*ERSCRPPP 657
LQA TW QL SRPVLH SR* SA SRSCIHA *R*RG GEEPRWLP*A*E +C PP
Sbjct: 156 LQAGTWIQLHSRPVLHSSR*SSAFSRSCIHAA*R*RGKGEEPRWLP*A*ECNCHRPP 326
Score = 101 bits (216), Expect(3) = 1e-086
Identities = 36/37 (97%), Positives = 36/37 (97%)
Frame = -1 / -2
Query: 886 NMWYRACTTCNKKVTEAFGSGYWCEGCQKNDSECSLR 776
NMWYRAC TCNKKVTEAFGSGYWCEGCQKNDSECSLR
Sbjct: 737 NMWYRACKTCNKKVTEAFGSGYWCEGCQKNDSECSLR 627
Score = 101 bits (215), Expect(2) = 3e-047
Identities = 41/52 (78%), Positives = 45/52 (86%)
Frame = -1 / -2
Query: 811 GCQKNDSECSLRYIMVIKLSDPTGEAWVSVFNEHAEKIIGCSADELDRIRKE 656
G + + S RYIMV+K+SDPTGEAWVSVFNEHAEKIIGCSADELDRIRKE
Sbjct: 587 GAKSDCFPASFRYIMVLKISDPTGEAWVSVFNEHAEKIIGCSADELDRIRKE 432
Score = 98.2 bits (208), Expect(4) = 3e-079
Identities = 37/38 (97%), Positives = 38/38 (100%)
Frame = +3 / +1
Query: 774 YLSEHSESFFWHPSHQYPDPKASVTFLLQVVQARYHIF 887
YLSEHSESFFWHPSHQYPDPKASVTFLLQV+QARYHIF
Sbjct: 625 YLSEHSESFFWHPSHQYPDPKASVTFLLQVLQARYHIF 738
Score = 83.1 bits (175), Expect(3) = 1e-086
Identities = 34/44 (77%), Positives = 38/44 (86%)
Frame = -3 / -1
Query: 785 LAEIHHGDQALRSHW*GLGVRVQRACGEDHWLQRRRA*SDQERG 654
+ +IH+G Q L SHW*G+GVRVQRAC EDHWLQR RA*SDQERG
Sbjct: 561 ILQIHNGPQDL*SHW*GMGVRVQRAC*EDHWLQR*RA*SDQERG 430
Score = 81.7 bits (172), Expect(4) = 3e-079
Identities = 34/41 (82%), Positives = 37/41 (90%)
Frame = +1 / +2
Query: 655 PLS*SDQARRRCSQ*SSPHAR*TRTPKPHQWDRRA*SP*CI 777
PLS*SDQAR+RCSQ*SS HAR*TRTP PHQWD+R+* P CI
Sbjct: 431 PLS*SDQARQRCSQ*SSQHAR*TRTPMPHQWDQRS*GPLCI 553
Score = 79.4 bits (167), Expect(3) = 2e-062
Identities = 33/42 (78%), Positives = 36/42 (85%)
Frame = +2 / +3
Query: 656 LFPDPIKLVGAAANDLLRMLVEHGHPSLTSGIGELDHHDVSQ 781
LFPDPIKLV AAANDLL MLVEHGHP LTSGI +L+ H VS+
Sbjct: 432 LFPDPIKLVSAAANDLLSMLVEHGHPCLTSGIRDLEDHYVSE 557
Score = 72.1 bits (151), Expect(3) = 2e-059
Identities = 30/45 (66%), Positives = 36/45 (80%)
Frame = -3 / -1
Query: 887 EYVVPCLHDL*QEGD*SFWVWILVRGVPKE*L*VLAEIHHGDQAL 753
EYVVPCL DL QEGD*SFW+WILV G+PKE L*+L E+ ++L
Sbjct: 738 EYVVPCLQDLQQEGD*SFWIWILV*GMPKERL*MLTEVKFVSRSL 604
Score = 71.6 bits (150), Expect(3) = 2e-062
Identities = 29/36 (80%), Positives = 29/36 (80%)
Frame = +1 / +2
Query: 778 SASTQSHSFGTPRTSIQTQKLQSPSCYRSCKHGTTY 885
S S QS SFG P TSIQ QKLQSPSC RSCKHGTTY
Sbjct: 629 SVSIQSRSFGIPHTSIQIQKLQSPSCCRSCKHGTTY 736
Score = 66.6 bits (139), Expect(3) = 2e-059
Identities = 32/41 (78%), Positives = 32/41 (78%)
Frame = -2 / -3
Query: 777 DTXXXXXSPIPLVRLGCPCSTSMRRRSLAAAPTSLIGSGKR 655
DT S IPLVR GCPCSTSM RRSLAAA TSLIGSGKR
Sbjct: 553 DT*WSSRSLIPLVRHGCPCSTSMLRRSLAAALTSLIGSGKR 431
Score = 62.9 bits (131), Expect(3) = 6e-045
Identities = 26/32 (81%), Positives = 28/32 (87%)
Frame = +3 / +1
Query: 690 QPMIFSACSLNTDTQASPVGSESLITMMYLSE 785
QPMIFSACSLNTDT ASPVGSE L T+MYL +
Sbjct: 466 QPMIFSACSLNTDTHASPVGSEILRTIMYLKD 561
Score = 62.5 bits (130), Expect(3) = 6e-045
Identities = 28/36 (77%), Positives = 29/36 (80%)
Frame = +2 / +3
Query: 779 QRALRVILLAPLAPVSRPKSFSHLLVTGRASTVPHI 886
Q A RV+LLA L PVSR KSFSHLLV G ASTVPHI
Sbjct: 630 Q*AFRVVLLASLTPVSRSKSFSHLLVAGLASTVPHI 737
Score = 24.0 bits (46), Expect(4) = 3e-079
Identities = 9/28 (32%), Positives = 13/28 (46%)
Frame = +3 / +3
Query: 348 PSESNTQNSNQVTGAQKKNCEGDIGGQS 431
P + N+N++ CEG I G S
Sbjct: 12 PPSRHESNTNRIKYYSSNPCEGTISGAS 95
>gb|BG240756.1|BG240756 OV1_37_H04.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 538
Score = 286 bits (619), Expect(3) = 1e-079
Identities = 116/127 (91%), Positives = 123/127 (96%)
Frame = -1 / +3
Query: 796 DSECSLRYIMVIKLSDPTGEAWVSVFNEHAEKIIGCSADELDRIRKEEGDDSYVLKLKEA 617
DSECSLRYIMV+K+SDPTGEAWVSVFNEHAEKIIGCSADELDRIRKEEGDDSY+LKLKEA
Sbjct: 3 DSECSLRYIMVLKISDPTGEAWVSVFNEHAEKIIGCSADELDRIRKEEGDDSYILKLKEA 182
Query: 616 TWVPHLFRVSVTQHEYMNEKRQRITVRGEAPVDFAAESKYLLEEIAKLTAC*KTQSFWWF 437
TWVPHLFRVSVTQHEYMNEKRQRITVR EAPVD+AAESKYLLEEIAKLTAC*K QSFWWF
Sbjct: 183 TWVPHLFRVSVTQHEYMNEKRQRITVRSEAPVDYAAESKYLLEEIAKLTAC*KMQSFWWF 362
Query: 436 LKDWPPM 416
+K+ P+
Sbjct: 363 VKEDWPL 383
Score = 232 bits (501), Expect(3) = 4e-064
Identities = 99/123 (80%), Positives = 105/123 (85%)
Frame = +2 / -3
Query: 428 VLQEPPERLRLLASGELRDLFKQVLGLSCEVDRCFTPHGDSLPLLVHVFMLCDADAEQVR 607
+L EPPERL LLAS +LRDLFKQVLG SC VDRCFTPHGD LP LVHVFML DADAE+VR
Sbjct: 371 LLHEPPERLHLLASSKLRDLFKQVLGFSCIVDRCFTPHGDPLPFLVHVFMLRDADAEKVR 192
Query: 608 NPGGFLELENVAVVPLLFPDPIKLVGAAANDLLRMLVEHGHPSLTSGIGELDHHDVSQRA 787
NPGGFLELENV V+ LLFPDPIKLV AAANDLL MLVEHGHP LTSGI +L+ H VSQ A
Sbjct: 191 NPGGFLELENVTVIALLFPDPIKLVSAAANDLLSMLVEHGHPCLTSGIRDLEDHYVSQ*A 12
Query: 788 LRV 796
RV
Sbjct: 11 FRV 3
Score = 215 bits (463), Expect(2) = 2e-057
Identities = 98/122 (80%), Positives = 106/122 (86%)
Frame = -3 / +2
Query: 794 L*VLAEIHHGDQALRSHW*GLGVRVQRACGEDHWLQRRRA*SDQERGGGRQLRSQAQGSH 615
L*+L EIH+G Q L SHW*G+GVRVQRAC EDHWLQR RA*SDQERGG QL SQAQGSH
Sbjct: 5 L*MLTEIHNGPQDL*SHW*GMGVRVQRAC*EDHWLQR*RA*SDQERGGR*QLHSQAQGSH 184
Query: 614 LGSSPVPRQRHTA*IHEREEAENHREG*STGRLRS*VQVLA*RDREAHRLLEDAVFLVVL 435
LGSSP PRQRH A*IHERE+AE+HRE *STGRL S*+QV A*RDREA+ LLEDA+FLVV
Sbjct: 185 LGSSPFPRQRHAA*IHEREKAEDHREE*STGRLCS*IQVPA*RDREAYCLLEDAIFLVVR 364
Query: 434 EG 429
EG
Sbjct: 365 EG 370
Score = 185 bits (398), Expect(2) = 8e-047
Identities = 82/103 (79%), Positives = 86/103 (83%)
Frame = +1 / -2
Query: 487 LQASTWTQLRSRPVLHPSR*FSASSRSCIHAV*R*RGTGEEPRWLP*A*ERSCRPPPLS* 666
LQA TW QL SRPVLH SR* SA SRSCIHA *R*RG GEEPRWLP*A*E +C PPLS*
Sbjct: 312 LQAGTWIQLHSRPVLHSSR*SSAFSRSCIHAA*R*RGKGEEPRWLP*A*ECNCHRPPLS* 133
Query: 667 SDQARRRCSQ*SSPHAR*TRTPKPHQWDRRA*SP*CISASTQS 795
SDQAR+RCSQ*SS HAR*TRTP PHQWD+R+* P CIS S QS
Sbjct: 132 SDQARQRCSQ*SSQHAR*TRTPMPHQWDQRS*GPLCISVSIQS 4
Score = 178 bits (383), Expect(2) = 2e-045
Identities = 83/103 (80%), Positives = 86/103 (83%)
Frame = -2 / +1
Query: 795 TLSAR*DTXXXXXSPIPLVRLGCPCSTSMRRRSLAAAPTSLIGSGKRRGTTATFSSSRKP 616
TL+A *DT S IPLVR GCPCSTSM RRSLAAA TSLIGSGKRR T TFSSSRKP
Sbjct: 4 TLNAH*DT*WSSRSLIPLVRHGCPCSTSMLRRSLAAALTSLIGSGKRRAMTVTFSSSRKP 183
Query: 615 PGFLTCSASASHSMNT*TRRGRESP*GVKHRSTSQLSPSTCLK 487
PGFLT SASAS SMNT*TR+GR SP*GVKHRST QL+PSTCLK
Sbjct: 184 PGFLTFSASASRSMNT*TRKGRGSP*GVKHRSTMQLNPSTCLK 312
Score = 135 bits (289), Expect(4) = 9e-052
Identities = 59/67 (88%), Positives = 61/67 (91%)
Frame = +3 / -1
Query: 420 GGQSFKNHQKDCVF*QAVSFAISSSKYLDSAAKSTGASPLTVILCLFSFMYSCCVTLTRN 599
G SF NHQKDC+F*QAVSFAISSS+YLDSAA STGAS LTVILCLFSFMYSCCVTLTR
Sbjct: 379 GQSSFTNHQKDCIF*QAVSFAISSSRYLDSAA*STGASLLTVILCLFSFMYSCCVTLTRK 200
Query: 600 R*GTQVA 620
R*GTQVA
Sbjct: 199 R*GTQVA 179
Score = 75.8 bits (159), Expect(4) = 9e-052
Identities = 32/36 (88%), Positives = 33/36 (91%)
Frame = +3 / -1
Query: 690 QPMIFSACSLNTDTQASPVGSESLITMMYLSEHSES 797
QPMIFSACSLNTDT ASPVGSE L T+MYLSEHSES
Sbjct: 109 QPMIFSACSLNTDTHASPVGSEILRTIMYLSEHSES 2
Score = 30.4 bits (60), Expect(2) = 2e-057
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = -3 / +2
Query: 377 ITVLCVALTGF*HFCKV 327
+ + CVAL G *HFCK+
Sbjct: 422 LLLFCVALIGL*HFCKI 472
Score = 29.0 bits (57), Expect(3) = 1e-079
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = -2 / +1
Query: 366 VCCSHWVLALL* 331
+CCSHW LALL*
Sbjct: 433 LCCSHWSLALL* 468
Score = 28.6 bits (56), Expect(4) = 9e-052
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = +3 / -1
Query: 327 YLTEVLKPSESNTQ 368
YLTEVLK +ESNT+
Sbjct: 472 YLTEVLKTNESNTE 431
Score = 28.6 bits (56), Expect(3) = 4e-064
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = +2 / -3
Query: 317 HLHIPYRSAKTQ*EQH 364
+++I YRSAK Q*EQH
Sbjct: 482 NIYISYRSAKDQ*EQH 435
Score = 27.2 bits (53), Expect(2) = 2e-045
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = -1 / +3
Query: 364 VLLSLGFSTSVRYM 323
VLLSL FSTSVRY+
Sbjct: 435 VLLSLVFSTSVRYV 476
Score = 25.8 bits (50), Expect(3) = 4e-064
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = +1 / -3
Query: 364 HRTVIKLLELK 396
HRTVIKLL+LK
Sbjct: 437 HRTVIKLLQLK 405
Score = 24.9 bits (48), Expect(2) = 8e-047
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +1 / -2
Query: 325 YTLQKC*NPVRATHRT 372
+ LQKC* P+RAT +
Sbjct: 474 HILQKC*RPMRATQNS 427
Score = 23.5 bits (45), Expect(4) = 9e-052
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +2 / -1
Query: 356 EQHTEQ*SSYWSSKEKLRGRHRG 424
E +TEQ* SY+SSK RG
Sbjct: 445 ESNTEQ**SYYSSKPLRGNHIRG 377
Score = 23.1 bits (44), Expect(3) = 1e-079
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = -1 / +2
Query: 397 F*APVT*LLFCVLL 356
F*A VT LLFCV L
Sbjct: 404 F*AVVTLLLFCVAL 445
>gb|CW177944.1|CW177944 104_591_11159301_116_36607_087 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11159301, DNA
sequence
Length = 690
Score = 138 bits (297), Expect(3) = 7e-077
Identities = 52/55 (94%), Positives = 53/55 (96%)
Frame = -1 / -2
Query: 940 KPVFFSLYAIISHIKPDQNMWYRACTTCNKKVTEAFGSGYWCEGCQKNDSECSLR 776
+PVFFSL AIISHIKPDQNMWYRAC TCNKKVTEAFGSGYWCEGCQKNDSECSLR
Sbjct: 359 QPVFFSLNAIISHIKPDQNMWYRACKTCNKKVTEAFGSGYWCEGCQKNDSECSLR 195
Score = 132 bits (282), Expect(3) = 1e-073
Identities = 51/55 (92%), Positives = 54/55 (98%)
Frame = +3 / +1
Query: 774 YLSEHSESFFWHPSHQYPDPKASVTFLLQVVQARYHIF*SGLMWLMMAYRLKKTG 938
YLSEHSESFFWHPSHQYPDPKASVTFLLQV+QARYHIF SGLMWLMMA++LKKTG
Sbjct: 193 YLSEHSESFFWHPSHQYPDPKASVTFLLQVLQARYHIFWSGLMWLMMAFKLKKTG 357
Score = 110 bits (234), Expect(3) = 7e-077
Identities = 46/53 (86%), Positives = 48/53 (90%)
Frame = -1 / -2
Query: 1096 NLKSWYDSEGKDTSLAPISAEVGATRAGGFKSMYSDRVFLSHITSDPAMGQEK 938
NL + YDSEGKDTSLAPI AE+GA RAGG KSMYSDRVFLSHITSDPAMGQEK
Sbjct: 593 NLSNRYDSEGKDTSLAPIGAEMGAARAGGLKSMYSDRVFLSHITSDPAMGQEK 435
Score = 108 bits (230), Expect(3) = 1e-073
Identities = 43/49 (87%), Positives = 45/49 (91%)
Frame = +2 / +3
Query: 938 LFLAHSRITGDVRQKNSIRIHGLETTSACGTHFCTDWCQ*SIFAFRVIP 1084
LFLAHSRITGDVRQKNSIRIHGL+ TS C THFCT+WC *SIFAFRVIP
Sbjct: 435 LFLAHSRITGDVRQKNSIRIHGLQATSPCSTHFCTNWC**SIFAFRVIP 581
Score = 107 bits (229), Expect(3) = 4e-060
Identities = 44/62 (70%), Positives = 50/62 (80%)
Frame = -3 / -1
Query: 938 ACFLQSVCHHKPHQA*SEYVVPCLHDL*QEGD*SFWVWILVRGVPKE*L*VLAEIHHGDQ 759
ACFLQ CHHKPHQA* EYVVPCL DL QEGD*SFW+WILV G+PKE L*+L E+ +
Sbjct: 357 ACFLQFKCHHKPHQA*PEYVVPCLQDLQQEGD*SFWIWILV*GMPKERL*MLTEVKFVSR 178
Query: 758 AL 753
+L
Sbjct: 177 SL 172
Score = 104 bits (222), Expect(3) = 4e-064
Identities = 41/48 (85%), Positives = 41/48 (85%)
Frame = +1 / +2
Query: 940 FPGP*QDHW*CETEKLYQNTWT*NHQRVWHPLLH*LVPVKYLCLQSHT 1083
FPGP*QDHW*CETEKLYQNTWT HQ V HP LH LV VKYLCLQSHT
Sbjct: 437 FPGP*QDHW*CETEKLYQNTWTSGHQPVQHPFLHQLVLVKYLCLQSHT 580
Score = 104 bits (222), Expect(3) = 4e-064
Identities = 44/54 (81%), Positives = 45/54 (83%)
Frame = +1 / +2
Query: 778 SASTQSHSFGTPRTSIQTQKLQSPSCYRSCKHGTTYSDQA*CGL*WHTD*RKQA 939
S S QS SFG P TSIQ QKLQSPSC RSCKHGTTYS QA*CGL*WH +*RKQA
Sbjct: 197 SVSIQSRSFGIPHTSIQIQKLQSPSCCRSCKHGTTYSGQA*CGL*WHLN*RKQA 358
Score = 100 bits (214), Expect(3) = 6e-057
Identities = 43/48 (89%), Positives = 44/48 (91%)
Frame = +3 / +1
Query: 939 FSWPIAGSLVM*DRKTLSEYMDLKPPARVAPTSALIGASEVSLPSESY 1082
FSWPIAGSLVM*DRKTLSEYMD +PPAR AP SA IGASEVSLPSESY
Sbjct: 436 FSWPIAGSLVM*DRKTLSEYMDFRPPARAAPISAPIGASEVSLPSESY 579
Score = 100 bits (214), Expect(3) = 4e-060
Identities = 42/48 (87%), Positives = 42/48 (87%)
Frame = -2 / -3
Query: 1083 GMTLKAKILHWHQSVQKWVPHALVVSSPCILIEFFCLTSPVILLWARK 940
GMTLKAKILH HQ VQKWV H LV SPCILIEFFCLTSPVILLWARK
Sbjct: 580 GMTLKAKILH*HQLVQKWVLHGLVA*SPCILIEFFCLTSPVILLWARK 437
Score = 99.1 bits (210), Expect(3) = 3e-029
Identities = 40/51 (78%), Positives = 44/51 (86%)
Frame = -1 / -2
Query: 811 GCQKNDSECSLRYIMVIKLSDPTGEAWVSVFNEHAEKIIGCSADELDRIRK 659
G + + S RYIMV+K+SDPTGEAWVSVFNEHAEKIIGCSADELDRIRK
Sbjct: 155 GAKSDCFPASFRYIMVLKISDPTGEAWVSVFNEHAEKIIGCSADELDRIRK 3
Score = 98.7 bits (209), Expect(3) = 6e-057
Identities = 44/54 (81%), Positives = 46/54 (85%)
Frame = +2 / +3
Query: 779 QRALRVILLAPLAPVSRPKSFSHLLVTGRASTVPHILIRLDVAYDGIQTEENRL 940
Q A RV+LLA L PVSR KSFSHLLV G ASTVPHIL+RLDVAYDGI TEENRL
Sbjct: 198 Q*AFRVVLLASLTPVSRSKSFSHLLVAGLASTVPHILVRLDVAYDGI*TEENRL 359
Score = 80.3 bits (169), Expect(3) = 7e-077
Identities = 33/43 (76%), Positives = 37/43 (86%)
Frame = -3 / -1
Query: 785 LAEIHHGDQALRSHW*GLGVRVQRACGEDHWLQRRRA*SDQER 657
+ +IH+G Q L SHW*G+GVRVQRAC EDHWLQR RA*SDQER
Sbjct: 129 ILQIHNGPQDL*SHW*GMGVRVQRAC*EDHWLQR*RA*SDQER 1
Score = 78.5 bits (165), Expect(3) = 1e-073
Identities = 33/40 (82%), Positives = 36/40 (90%)
Frame = +1 / +2
Query: 658 LS*SDQARRRCSQ*SSPHAR*TRTPKPHQWDRRA*SP*CI 777
LS*SDQAR+RCSQ*SS HAR*TRTP PHQWD+R+* P CI
Sbjct: 2 LS*SDQARQRCSQ*SSQHAR*TRTPMPHQWDQRS*GPLCI 121
Score = 77.6 bits (163), Expect(3) = 4e-064
Identities = 32/41 (78%), Positives = 35/41 (85%)
Frame = +2 / +3
Query: 659 FPDPIKLVGAAANDLLRMLVEHGHPSLTSGIGELDHHDVSQ 781
FPDPIKLV AAANDLL MLVEHGHP LTSGI +L+ H VS+
Sbjct: 3 FPDPIKLVSAAANDLLSMLVEHGHPCLTSGIRDLEDHYVSE 125
Score = 64.3 bits (134), Expect(3) = 4e-060
Identities = 31/40 (77%), Positives = 31/40 (77%)
Frame = -2 / -3
Query: 777 DTXXXXXSPIPLVRLGCPCSTSMRRRSLAAAPTSLIGSGK 658
DT S IPLVR GCPCSTSM RRSLAAA TSLIGSGK
Sbjct: 121 DT*WSSRSLIPLVRHGCPCSTSMLRRSLAAALTSLIGSGK 2
Score = 62.9 bits (131), Expect(3) = 6e-057
Identities = 26/32 (81%), Positives = 28/32 (87%)
Frame = +3 / +1
Query: 690 QPMIFSACSLNTDTQASPVGSESLITMMYLSE 785
QPMIFSACSLNTDT ASPVGSE L T+MYL +
Sbjct: 34 QPMIFSACSLNTDTHASPVGSEILRTIMYLKD 129
Score = 50.6 bits (104), Expect(3) = 3e-029
Identities = 19/24 (79%), Positives = 20/24 (83%)
Frame = -3 / -1
Query: 1082 V*L*RQRYFTGTNQCRSGCHTRWW 1011
V*L*RQRYFT TN CR+GC T WW
Sbjct: 579 V*L*RQRYFTSTNWCRNGCCTGWW 508
Score = 24.9 bits (48), Expect(3) = 3e-029
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = -3 / -1
Query: 962 *SCYGPGKACFL 927
*SCYGPGK L
Sbjct: 459 *SCYGPGKGMIL 424
>gb|BZ348728.1|BZ348728 hp60e11.g2 WGS-SbicolorF (JM107 adapted methyl filtered) Sorghum
bicolor genomic clone hp60e11 5', DNA sequence
Length = 674
Score = 110 bits (234), Expect(4) = 1e-063
Identities = 46/53 (86%), Positives = 48/53 (90%)
Frame = -1 / +3
Query: 1096 NLKSWYDSEGKDTSLAPISAEVGATRAGGFKSMYSDRVFLSHITSDPAMGQEK 938
NL + YDSEGKDTSLAPI AE+GA RAGG KSMYSDRVFLSHITSDPAMGQEK
Sbjct: 399 NLSNRYDSEGKDTSLAPIGAEMGAARAGGLKSMYSDRVFLSHITSDPAMGQEK 557
Score = 108 bits (230), Expect(4) = 5e-057
Identities = 43/49 (87%), Positives = 45/49 (91%)
Frame = +2 / -1
Query: 938 LFLAHSRITGDVRQKNSIRIHGLETTSACGTHFCTDWCQ*SIFAFRVIP 1084
LFLAHSRITGDVRQKNSIRIHGL+ TS C THFCT+WC *SIFAFRVIP
Sbjct: 557 LFLAHSRITGDVRQKNSIRIHGLQATSPCSTHFCTNWC**SIFAFRVIP 411
Score = 104 bits (222), Expect(3) = 5e-047
Identities = 41/48 (85%), Positives = 41/48 (85%)
Frame = +1 / -3
Query: 940 FPGP*QDHW*CETEKLYQNTWT*NHQRVWHPLLH*LVPVKYLCLQSHT 1083
FPGP*QDHW*CETEKLYQNTWT HQ V HP LH LV VKYLCLQSHT
Sbjct: 555 FPGP*QDHW*CETEKLYQNTWTSGHQPVQHPFLHQLVLVKYLCLQSHT 412
Score = 100 bits (214), Expect(3) = 5e-047
Identities = 45/56 (80%), Positives = 47/56 (83%)
Frame = +3 / -3
Query: 1119 LISRVLLPIVERDTPWKSDTFRLFIATTGELSTMSKSSWPVVVARSFQREIVTVLP 1286
LISR + D PWKSDTFRLFIAT GELSTMSKSSWPVVVARSFQREI+TVLP
Sbjct: 195 LISRKKIKQRLDDIPWKSDTFRLFIATPGELSTMSKSSWPVVVARSFQREILTVLP 28
Score = 100 bits (214), Expect(4) = 2e-049
Identities = 42/48 (87%), Positives = 42/48 (87%)
Frame = -2 / +1
Query: 1083 GMTLKAKILHWHQSVQKWVPHALVVSSPCILIEFFCLTSPVILLWARK 940
GMTLKAKILH HQ VQKWV H LV SPCILIEFFCLTSPVILLWARK
Sbjct: 412 GMTLKAKILH*HQLVQKWVLHGLVA*SPCILIEFFCLTSPVILLWARK 555
Score = 100 bits (214), Expect(4) = 3e-041
Identities = 43/48 (89%), Positives = 44/48 (91%)
Frame = +3 / -2
Query: 939 FSWPIAGSLVM*DRKTLSEYMDLKPPARVAPTSALIGASEVSLPSESY 1082
FSWPIAGSLVM*DRKTLSEYMD +PPAR AP SA IGASEVSLPSESY
Sbjct: 556 FSWPIAGSLVM*DRKTLSEYMDFRPPARAAPISAPIGASEVSLPSESY 413
Score = 100 bits (214), Expect(4) = 1e-063
Identities = 39/44 (88%), Positives = 39/44 (88%)
Frame = -3 / +1
Query: 1286 WQNCYYFSLE*SCYYDWPRAFGHG*QFSCCCDKEPKSI*LPRRV 1155
WQNC YFSLE*SCYY WPRAFGHG*QFS CCDKEPKSI* PR V
Sbjct: 28 WQNC*YFSLE*SCYYYWPRAFGHG*QFSWCCDKEPKSI*FPRDV 159
Score = 97.3 bits (206), Expect(4) = 2e-049
Identities = 42/45 (93%), Positives = 44/45 (97%)
Frame = -1 / +2
Query: 1288 SGKTVTISLWNDLATTTGQELLDMVDSSPVVAIKSLKVSDFQGVS 1154
SGKTV+ISLWNDLATTTGQELLDMVDSSP VAIKSLKVSDFQG+S
Sbjct: 26 SGKTVSISLWNDLATTTGQELLDMVDSSPGVAIKSLKVSDFQGMS 160
Score = 90.4 bits (191), Expect(4) = 5e-057
Identities = 38/43 (88%), Positives = 40/43 (93%)
Frame = +2 / -2
Query: 1157 HALEVRYF*ALYRNNRRTVNHVQKLLASRSSKIIPERNSNSFA 1285
H LE+RYF*ALYRN RRTVNHVQKLLAS SSKIIPERN+NSFA
Sbjct: 157 HPLEIRYF*ALYRNTRRTVNHVQKLLASSSSKIIPERNTNSFA 29
Score = 62.5 bits (130), Expect(4) = 1e-063
Identities = 25/29 (86%), Positives = 27/29 (93%)
Frame = -1 / +2
Query: 1168 FQGVSLSTIGRSTLEINPDLPEAKNLKSW 1082
F GVSLSTIGRSTL INPDLPEA+N+KSW
Sbjct: 239 FAGVSLSTIGRSTLAINPDLPEAQNVKSW 325
Score = 60.2 bits (125), Expect(4) = 3e-041
Identities = 25/27 (92%), Positives = 25/27 (92%)
Frame = +1 / -1
Query: 1204 ENCQPCPKALGQS**QDHSREK**QFC 1284
ENCQPCPKALGQ **QDHSREK *QFC
Sbjct: 110 ENCQPCPKALGQ***QDHSREKY*QFC 30
Score = 52.8 bits (109), Expect(4) = 5e-057
Identities = 23/30 (76%), Positives = 25/30 (83%)
Frame = +3 / -3
Query: 1080 YQDLRFLASGKSGLISRVLLPIVERDTPWK 1169
Y DL F ASG+SGLI+RVLLPIVE DTP K
Sbjct: 327 YHDLTF*ASGRSGLIARVLLPIVESDTPAK 238
Score = 38.6 bits (78), Expect(4) = 3e-041
Identities = 20/38 (52%), Positives = 24/38 (63%)
Frame = +2 / -2
Query: 1064 FAFRVIPGLKILSLRQVRINLESTSANS*KRHALEVRY 1177
F V+P ILSLRQV IN +S SA S*K HA + +
Sbjct: 343 FRREVLP*FNILSLRQVWINSKSASAYS*K*HACKTNF 230
Score = 30.4 bits (60), Expect(4) = 2e-049
Identities = 17/28 (60%), Positives = 21/28 (75%)
Frame = -3 / +1
Query: 1163 RRVSFNYWQKYSRD*S*LA*G*ES*VLV 1080
RRV+FNY QK+S *S A*G E *++V
Sbjct: 244 RRVTFNYRQKHSCY*SRPA*GSEC*IMV 327
Score = 29.5 bits (58), Expect(4) = 1e-063
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = -3 / +2
Query: 938 ACFLQSVCHHKPH 900
A FLQ CHHKPH
Sbjct: 635 AWFLQFKCHHKPH 673
Score = 29.5 bits (58), Expect(4) = 5e-057
Identities = 10/13 (76%), Positives = 12/13 (92%)
Frame = +3 / -2
Query: 900 MWLMMAYRLKKTG 938
MWLMMA++LKK G
Sbjct: 673 MWLMMAFKLKKPG 635
Score = 29.0 bits (57), Expect(3) = 5e-047
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = +2 / -1
Query: 899 DVAYDGIQTEENRL 940
DVAYDGI TEE RL
Sbjct: 674 DVAYDGI*TEETRL 633
Score = 27.6 bits (54), Expect(4) = 3e-041
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +1 / -3
Query: 901 CGL*WHTD*RKQA 939
CGL*WH +*R QA
Sbjct: 672 CGL*WHLN*RNQA 634
Score = 26.3 bits (51), Expect(4) = 2e-049
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = -1 / +3
Query: 940 KPVFFSLYAIISHI 899
+P FFSL AIISHI
Sbjct: 633 QPGFFSLNAIISHI 674
>gb|CW458017.1|CW458017 fsbb001f204b14k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f204b14, DNA
sequence
Length = 651
Score = 110 bits (234), Expect(3) = 1e-061
Identities = 46/53 (86%), Positives = 48/53 (90%)
Frame = -1 / +2
Query: 1096 NLKSWYDSEGKDTSLAPISAEVGATRAGGFKSMYSDRVFLSHITSDPAMGQEK 938
NL + YDSEGKDTSLAPI AE+GA RAGG KSMYSDRVFLSHITSDPAMGQEK
Sbjct: 476 NLSNRYDSEGKDTSLAPIGAEMGAARAGGLKSMYSDRVFLSHITSDPAMGQEK 634
Score = 108 bits (230), Expect(3) = 1e-054
Identities = 43/49 (87%), Positives = 45/49 (91%)
Frame = +2 / -3
Query: 938 LFLAHSRITGDVRQKNSIRIHGLETTSACGTHFCTDWCQ*SIFAFRVIP 1084
LFLAHSRITGDVRQKNSIRIHGL+ TS C THFCT+WC *SIFAFRVIP
Sbjct: 634 LFLAHSRITGDVRQKNSIRIHGLQATSPCSTHFCTNWC**SIFAFRVIP 488
Score = 105 bits (225), Expect(3) = 1e-061
Identities = 40/44 (90%), Positives = 40/44 (90%)
Frame = -3 / +3
Query: 1286 WQNCYYFSLE*SCYYDWPRAFGHG*QFSCCCDKEPKSI*LPRRV 1155
WQNC YFSLE*SCYY WPRAFGHG*QFSCCCDKEPKSI* PR V
Sbjct: 105 WQNC*YFSLE*SCYYYWPRAFGHG*QFSCCCDKEPKSI*FPRYV 236
Score = 104 bits (222), Expect(2) = 2e-045
Identities = 41/48 (85%), Positives = 41/48 (85%)
Frame = +1 / -2
Query: 940 FPGP*QDHW*CETEKLYQNTWT*NHQRVWHPLLH*LVPVKYLCLQSHT 1083
FPGP*QDHW*CETEKLYQNTWT HQ V HP LH LV VKYLCLQSHT
Sbjct: 632 FPGP*QDHW*CETEKLYQNTWTSGHQPVQHPFLHQLVLVKYLCLQSHT 489
Score = 103 bits (220), Expect(2) = 2e-045
Identities = 46/56 (82%), Positives = 48/56 (85%)
Frame = +3 / -2
Query: 1119 LISRVLLPIVERDTPWKSDTFRLFIATTGELSTMSKSSWPVVVARSFQREIVTVLP 1286
LISR + D PWKSDTFRLFIATTGELSTMSKSSWPVVVARSFQREI+TVLP
Sbjct: 272 LISRKKIKQRLDDIPWKSDTFRLFIATTGELSTMSKSSWPVVVARSFQREILTVLP 105
Score = 100 bits (214), Expect(3) = 8e-048
Identities = 42/48 (87%), Positives = 42/48 (87%)
Frame = -2 / +3
Query: 1083 GMTLKAKILHWHQSVQKWVPHALVVSSPCILIEFFCLTSPVILLWARK 940
GMTLKAKILH HQ VQKWV H LV SPCILIEFFCLTSPVILLWARK
Sbjct: 489 GMTLKAKILH*HQLVQKWVLHGLVA*SPCILIEFFCLTSPVILLWARK 632
Score = 100 bits (214), Expect(3) = 2e-038
Identities = 43/48 (89%), Positives = 44/48 (91%)
Frame = +3 / -1
Query: 939 FSWPIAGSLVM*DRKTLSEYMDLKPPARVAPTSALIGASEVSLPSESY 1082
FSWPIAGSLVM*DRKTLSEYMD +PPAR AP SA IGASEVSLPSESY
Sbjct: 633 FSWPIAGSLVM*DRKTLSEYMDFRPPARAAPISAPIGASEVSLPSESY 490
Score = 100 bits (213), Expect(3) = 8e-048
Identities = 43/45 (95%), Positives = 45/45 (100%)
Frame = -1 / +1
Query: 1288 SGKTVTISLWNDLATTTGQELLDMVDSSPVVAIKSLKVSDFQGVS 1154
SGKTV+ISLWNDLATTTGQELLDMVDSSPVVAIKSLKVSDFQG+S
Sbjct: 103 SGKTVSISLWNDLATTTGQELLDMVDSSPVVAIKSLKVSDFQGMS 237
Score = 93.6 bits (198), Expect(3) = 1e-054
Identities = 39/43 (90%), Positives = 41/43 (95%)
Frame = +2 / -1
Query: 1157 HALEVRYF*ALYRNNRRTVNHVQKLLASRSSKIIPERNSNSFA 1285
H LE+RYF*ALYRNNRRTVNHVQKLLAS SSKIIPERN+NSFA
Sbjct: 234 HTLEIRYF*ALYRNNRRTVNHVQKLLASSSSKIIPERNTNSFA 106
Score = 62.5 bits (130), Expect(3) = 1e-061
Identities = 25/29 (86%), Positives = 27/29 (93%)
Frame = -1 / +1
Query: 1168 FQGVSLSTIGRSTLEINPDLPEAKNLKSW 1082
F GVSLSTIGRSTL INPDLPEA+N+KSW
Sbjct: 316 FAGVSLSTIGRSTLAINPDLPEAQNVKSW 402
Score = 60.2 bits (125), Expect(3) = 2e-038
Identities = 25/27 (92%), Positives = 25/27 (92%)
Frame = +1 / -3
Query: 1204 ENCQPCPKALGQS**QDHSREK**QFC 1284
ENCQPCPKALGQ **QDHSREK *QFC
Sbjct: 187 ENCQPCPKALGQ***QDHSREKY*QFC 107
Score = 52.8 bits (109), Expect(3) = 1e-054
Identities = 23/30 (76%), Positives = 25/30 (83%)
Frame = +3 / -2
Query: 1080 YQDLRFLASGKSGLISRVLLPIVERDTPWK 1169
Y DL F ASG+SGLI+RVLLPIVE DTP K
Sbjct: 404 YHDLTF*ASGRSGLIARVLLPIVESDTPAK 315
Score = 38.6 bits (78), Expect(3) = 2e-038
Identities = 20/38 (52%), Positives = 24/38 (63%)
Frame = +2 / -1
Query: 1064 FAFRVIPGLKILSLRQVRINLESTSANS*KRHALEVRY 1177
F V+P ILSLRQV IN +S SA S*K HA + +
Sbjct: 420 FRREVLP*FNILSLRQVWINSKSASAYS*K*HACKTNF 307
Score = 30.4 bits (60), Expect(3) = 8e-048
Identities = 17/28 (60%), Positives = 21/28 (75%)
Frame = -3 / +3
Query: 1163 RRVSFNYWQKYSRD*S*LA*G*ES*VLV 1080
RRV+FNY QK+S *S A*G E *++V
Sbjct: 321 RRVTFNYRQKHSCY*SRPA*GSEC*IMV 404
>gb|CW135163.1|CW135163 104_519_11117699_148_34826_038 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11117699, DNA
sequence
Length = 563
Score = 177 bits (380), Expect(4) = 7e-053
Identities = 71/81 (87%), Positives = 77/81 (95%)
Frame = -1 / -3
Query: 658 EEGDDSYVLKLKEATWVPHLFRVSVTQHEYMNEKRQRITVRGEAPVDFAAESKYLLEEIA 479
+EGDDSY+LKLKEATWVPHLFRVSVTQHEYMNEKRQRITVR EAPVD+AAESKYLLEEIA
Sbjct: 414 QEGDDSYILKLKEATWVPHLFRVSVTQHEYMNEKRQRITVRSEAPVDYAAESKYLLEEIA 235
Query: 478 KLTAC*KTQSFWWFLKDWPPM 416
KLTAC*K QSFWWF+K+ P+
Sbjct: 234 KLTAC*KMQSFWWFVKEDWPL 172
Score = 152 bits (326), Expect(4) = 1e-045
Identities = 63/77 (81%), Positives = 67/77 (87%)
Frame = +2 / +1
Query: 428 VLQEPPERLRLLASGELRDLFKQVLGLSCEVDRCFTPHGDSLPLLVHVFMLCDADAEQVR 607
+L EPPERL LLAS +LRDLFKQVLG SC VDRCFTPHGD LP LVHVFML DADAE+VR
Sbjct: 184 LLHEPPERLHLLASSKLRDLFKQVLGFSCIVDRCFTPHGDPLPFLVHVFMLRDADAEKVR 363
Query: 608 NPGGFLELENVAVVPLL 658
NPGGFLELENV V+ LL
Sbjct: 364 NPGGFLELENVTVIALL 414
Score = 135 bits (289), Expect(4) = 2e-037
Identities = 59/67 (88%), Positives = 61/67 (91%)
Frame = +3 / +2
Query: 420 GGQSFKNHQKDCVF*QAVSFAISSSKYLDSAAKSTGASPLTVILCLFSFMYSCCVTLTRN 599
G SF NHQKDC+F*QAVSFAISSS+YLDSAA STGAS LTVILCLFSFMYSCCVTLTR
Sbjct: 176 GQSSFTNHQKDCIF*QAVSFAISSSRYLDSAA*STGASLLTVILCLFSFMYSCCVTLTRK 355
Query: 600 R*GTQVA 620
R*GTQVA
Sbjct: 356 R*GTQVA 376
Score = 132 bits (282), Expect(3) = 1e-037
Identities = 61/76 (80%), Positives = 66/76 (86%)
Frame = -3 / -2
Query: 656 GGGRQLRSQAQGSHLGSSPVPRQRHTA*IHEREEAENHREG*STGRLRS*VQVLA*RDRE 477
GG QL SQAQGSHLGSSP PRQRH A*IHERE+AE+HRE *STGRL S*+QV A*RDRE
Sbjct: 412 GGR*QLHSQAQGSHLGSSPFPRQRHAA*IHEREKAEDHREE*STGRLCS*IQVPA*RDRE 233
Query: 476 AHRLLEDAVFLVVLEG 429
A+ LLEDA+FLVV EG
Sbjct: 232 AYCLLEDAIFLVVREG 185
Score = 110 bits (234), Expect(3) = 7e-029
Identities = 48/57 (84%), Positives = 50/57 (87%)
Frame = -2 / -1
Query: 657 RRGTTATFSSSRKPPGFLTCSASASHSMNT*TRRGRESP*GVKHRSTSQLSPSTCLK 487
RR T TFSSSRKPPGFLT SASAS SMNT*TR+GR SP*GVKHRST QL+PSTCLK
Sbjct: 413 RRAMTVTFSSSRKPPGFLTFSASASRSMNT*TRKGRGSP*GVKHRSTMQLNPSTCLK 243
Score = 102 bits (217), Expect(2) = 4e-022
Identities = 45/57 (78%), Positives = 46/57 (80%)
Frame = +1 / +3
Query: 487 LQASTWTQLRSRPVLHPSR*FSASSRSCIHAV*R*RGTGEEPRWLP*A*ERSCRPPP 657
LQA TW QL SRPVLH SR* SA SRSCIHA *R*RG GEEPRWLP*A*E +C PP
Sbjct: 243 LQAGTWIQLHSRPVLHSSR*SSAFSRSCIHAA*R*RGKGEEPRWLP*A*ECNCHRPP 413
Score = 37.7 bits (76), Expect(4) = 7e-053
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = -1 / -1
Query: 700 IIGCSADELDRIRKE 656
IIGCSADELDRIRKE
Sbjct: 563 IIGCSADELDRIRKE 519
Score = 35.4 bits (71), Expect(4) = 1e-045
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +2 / +3
Query: 656 LFPDPIKLVGAAAND 700
LFPDPIKLV AAAND
Sbjct: 519 LFPDPIKLVSAAAND 563
Score = 35.0 bits (70), Expect(3) = 1e-037
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = -3 / -3
Query: 698 HWLQRRRA*SDQERG 654
HWLQR RA*SDQERG
Sbjct: 561 HWLQR*RA*SDQERG 517
Score = 32.7 bits (65), Expect(4) = 2e-037
Identities = 14/15 (93%), Positives = 15/15 (100%)
Frame = +1 / +2
Query: 655 PLS*SDQARRRCSQ* 699
PLS*SDQAR+RCSQ*
Sbjct: 518 PLS*SDQARQRCSQ* 562
Score = 30.4 bits (60), Expect(3) = 1e-037
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = -3 / -2
Query: 377 ITVLCVALTGF*HFCKV 327
+ + CVAL G *HFCK+
Sbjct: 133 LLLFCVALIGL*HFCKI 83
Score = 30.4 bits (60), Expect(3) = 7e-029
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = -2 / -2
Query: 699 SLAAAPTSLIGSGKR 655
SLAAA TSLIGSGKR
Sbjct: 562 SLAAALTSLIGSGKR 518
Score = 29.0 bits (57), Expect(4) = 7e-053
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = -2 / -1
Query: 366 VCCSHWVLALL* 331
+CCSHW LALL*
Sbjct: 122 LCCSHWSLALL* 87
Score = 28.6 bits (56), Expect(4) = 2e-037
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = +3 / +2
Query: 327 YLTEVLKPSESNTQ 368
YLTEVLK +ESNT+
Sbjct: 83 YLTEVLKTNESNTE 124
Score = 28.6 bits (56), Expect(4) = 1e-045
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = +2 / +1
Query: 317 HLHIPYRSAKTQ*EQH 364
+++I YRSAK Q*EQH
Sbjct: 73 NIYISYRSAKDQ*EQH 120
Score = 27.2 bits (53), Expect(3) = 7e-029
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = -1 / -3
Query: 364 VLLSLGFSTSVRYM 323
VLLSL FSTSVRY+
Sbjct: 120 VLLSLVFSTSVRYV 79
Score = 25.8 bits (50), Expect(4) = 1e-045
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = +1 / +1
Query: 364 HRTVIKLLELK 396
HRTVIKLL+LK
Sbjct: 118 HRTVIKLLQLK 150
Score = 24.9 bits (48), Expect(2) = 4e-022
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +1 / +3
Query: 325 YTLQKC*NPVRATHRT 372
+ LQKC* P+RAT +
Sbjct: 81 HILQKC*RPMRATQNS 128
Score = 23.5 bits (45), Expect(4) = 2e-037
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +2 / +2
Query: 356 EQHTEQ*SSYWSSKEKLRGRHRG 424
E +TEQ* SY+SSK RG
Sbjct: 110 ESNTEQ**SYYSSKPLRGNHIRG 178
Score = 23.1 bits (44), Expect(4) = 7e-053
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = -1 / -2
Query: 397 F*APVT*LLFCVLL 356
F*A VT LLFCV L
Sbjct: 151 F*AVVTLLLFCVAL 110
>gb|CW135162.1|CW135162 104_519_11117699_116_34830_038 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11117699, DNA
sequence
Length = 563
Score = 177 bits (380), Expect(4) = 2e-052
Identities = 71/81 (87%), Positives = 77/81 (95%)
Frame = -1 / +1
Query: 658 EEGDDSYVLKLKEATWVPHLFRVSVTQHEYMNEKRQRITVRGEAPVDFAAESKYLLEEIA 479
+EGDDSY+LKLKEATWVPHLFRVSVTQHEYMNEKRQRITVR EAPVD+AAESKYLLEEIA
Sbjct: 148 QEGDDSYILKLKEATWVPHLFRVSVTQHEYMNEKRQRITVRSEAPVDYAAESKYLLEEIA 327
Query: 478 KLTAC*KTQSFWWFLKDWPPM 416
KLTAC*K QSFWWF+K+ P+
Sbjct: 328 KLTAC*KMQSFWWFVKEDWPL 390
Score = 152 bits (326), Expect(4) = 9e-045
Identities = 63/77 (81%), Positives = 67/77 (87%)
Frame = +2 / -3
Query: 428 VLQEPPERLRLLASGELRDLFKQVLGLSCEVDRCFTPHGDSLPLLVHVFMLCDADAEQVR 607
+L EPPERL LLAS +LRDLFKQVLG SC VDRCFTPHGD LP LVHVFML DADAE+VR
Sbjct: 378 LLHEPPERLHLLASSKLRDLFKQVLGFSCIVDRCFTPHGDPLPFLVHVFMLRDADAEKVR 199
Query: 608 NPGGFLELENVAVVPLL 658
NPGGFLELENV V+ LL
Sbjct: 198 NPGGFLELENVTVIALL 148
Score = 135 bits (289), Expect(4) = 3e-037
Identities = 59/67 (88%), Positives = 61/67 (91%)
Frame = +3 / -1
Query: 420 GGQSFKNHQKDCVF*QAVSFAISSSKYLDSAAKSTGASPLTVILCLFSFMYSCCVTLTRN 599
G SF NHQKDC+F*QAVSFAISSS+YLDSAA STGAS LTVILCLFSFMYSCCVTLTR
Sbjct: 386 GQSSFTNHQKDCIF*QAVSFAISSSRYLDSAA*STGASLLTVILCLFSFMYSCCVTLTRK 207
Query: 600 R*GTQVA 620
R*GTQVA
Sbjct: 206 R*GTQVA 186
Score = 132 bits (282), Expect(3) = 1e-037
Identities = 61/76 (80%), Positives = 66/76 (86%)
Frame = -3 / +3
Query: 656 GGGRQLRSQAQGSHLGSSPVPRQRHTA*IHEREEAENHREG*STGRLRS*VQVLA*RDRE 477
GG QL SQAQGSHLGSSP PRQRH A*IHERE+AE+HRE *STGRL S*+QV A*RDRE
Sbjct: 150 GGR*QLHSQAQGSHLGSSPFPRQRHAA*IHEREKAEDHREE*STGRLCS*IQVPA*RDRE 329
Query: 476 AHRLLEDAVFLVVLEG 429
A+ LLEDA+FLVV EG
Sbjct: 330 AYCLLEDAIFLVVREG 377
Score = 110 bits (234), Expect(3) = 2e-028
Identities = 48/57 (84%), Positives = 50/57 (87%)
Frame = -2 / +2
Query: 657 RRGTTATFSSSRKPPGFLTCSASASHSMNT*TRRGRESP*GVKHRSTSQLSPSTCLK 487
RR T TFSSSRKPPGFLT SASAS SMNT*TR+GR SP*GVKHRST QL+PSTCLK
Sbjct: 149 RRAMTVTFSSSRKPPGFLTFSASASRSMNT*TRKGRGSP*GVKHRSTMQLNPSTCLK 319
Score = 102 bits (217), Expect(2) = 4e-022
Identities = 45/57 (78%), Positives = 46/57 (80%)
Frame = +1 / -2
Query: 487 LQASTWTQLRSRPVLHPSR*FSASSRSCIHAV*R*RGTGEEPRWLP*A*ERSCRPPP 657
LQA TW QL SRPVLH SR* SA SRSCIHA *R*RG GEEPRWLP*A*E +C PP
Sbjct: 319 LQAGTWIQLHSRPVLHSSR*SSAFSRSCIHAA*R*RGKGEEPRWLP*A*ECNCHRPP 149
Score = 35.9 bits (72), Expect(4) = 2e-052
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = -1 / +2
Query: 697 IGCSADELDRIRKE 656
IGCSADELDRIRKE
Sbjct: 2 IGCSADELDRIRKE 43
Score = 35.0 bits (70), Expect(3) = 1e-037
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = -3 / +1
Query: 698 HWLQRRRA*SDQERG 654
HWLQR RA*SDQERG
Sbjct: 1 HWLQR*RA*SDQERG 45
Score = 32.7 bits (65), Expect(4) = 9e-045
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = +2 / -2
Query: 656 LFPDPIKLVGAAAN 697
LFPDPIKLV AAAN
Sbjct: 43 LFPDPIKLVSAAAN 2
Score = 32.2 bits (64), Expect(4) = 3e-037
Identities = 13/14 (92%), Positives = 14/14 (100%)
Frame = +1 / -1
Query: 655 PLS*SDQARRRCSQ 696
PLS*SDQAR+RCSQ
Sbjct: 44 PLS*SDQARQRCSQ 3
Score = 30.4 bits (60), Expect(3) = 1e-037
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = -3 / +3
Query: 377 ITVLCVALTGF*HFCKV 327
+ + CVAL G *HFCK+
Sbjct: 429 LLLFCVALIGL*HFCKI 479
Score = 29.0 bits (57), Expect(4) = 2e-052
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = -2 / +2
Query: 366 VCCSHWVLALL* 331
+CCSHW LALL*
Sbjct: 440 LCCSHWSLALL* 475
Score = 28.6 bits (56), Expect(4) = 3e-037
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = +3 / -1
Query: 327 YLTEVLKPSESNTQ 368
YLTEVLK +ESNT+
Sbjct: 479 YLTEVLKTNESNTE 438
Score = 28.6 bits (56), Expect(4) = 9e-045
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = +2 / -3
Query: 317 HLHIPYRSAKTQ*EQH 364
+++I YRSAK Q*EQH
Sbjct: 489 NIYISYRSAKDQ*EQH 442
Score = 28.6 bits (56), Expect(3) = 2e-028
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = -2 / +3
Query: 696 LAAAPTSLIGSGKR 655
LAAA TSLIGSGKR
Sbjct: 3 LAAALTSLIGSGKR 44
Score = 27.2 bits (53), Expect(3) = 2e-028
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = -1 / +1
Query: 364 VLLSLGFSTSVRYM 323
VLLSL FSTSVRY+
Sbjct: 442 VLLSLVFSTSVRYV 483
Score = 25.8 bits (50), Expect(4) = 9e-045
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = +1 / -3
Query: 364 HRTVIKLLELK 396
HRTVIKLL+LK
Sbjct: 444 HRTVIKLLQLK 412
Score = 24.9 bits (48), Expect(2) = 4e-022
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +1 / -2
Query: 325 YTLQKC*NPVRATHRT 372
+ LQKC* P+RAT +
Sbjct: 481 HILQKC*RPMRATQNS 434
Score = 23.5 bits (45), Expect(4) = 3e-037
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +2 / -1
Query: 356 EQHTEQ*SSYWSSKEKLRGRHRG 424
E +TEQ* SY+SSK RG
Sbjct: 452 ESNTEQ**SYYSSKPLRGNHIRG 384
Score = 23.1 bits (44), Expect(4) = 2e-052
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = -1 / +3
Query: 397 F*APVT*LLFCVLL 356
F*A VT LLFCV L
Sbjct: 411 F*AVVTLLLFCVAL 452
>gb|CW413938.1|CW413938 fsbb001f113f13k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f113f13, DNA
sequence
Length = 579
Score = 177 bits (380), Expect(3) = 3e-050
Identities = 71/81 (87%), Positives = 77/81 (95%)
Frame = -1 / +3
Query: 658 EEGDDSYVLKLKEATWVPHLFRVSVTQHEYMNEKRQRITVRGEAPVDFAAESKYLLEEIA 479
+EGDDSY+LKLKEATWVPHLFRVSVTQHEYMNEKRQRITVR EAPVD+AAESKYLLEEIA
Sbjct: 93 QEGDDSYILKLKEATWVPHLFRVSVTQHEYMNEKRQRITVRSEAPVDYAAESKYLLEEIA 272
Query: 478 KLTAC*KTQSFWWFLKDWPPM 416
KLTAC*K QSFWWF+K+ P+
Sbjct: 273 KLTAC*KMQSFWWFVKEDWPL 335
Score = 152 bits (326), Expect(4) = 3e-043
Identities = 63/77 (81%), Positives = 67/77 (87%)
Frame = +2 / -2
Query: 428 VLQEPPERLRLLASGELRDLFKQVLGLSCEVDRCFTPHGDSLPLLVHVFMLCDADAEQVR 607
+L EPPERL LLAS +LRDLFKQVLG SC VDRCFTPHGD LP LVHVFML DADAE+VR
Sbjct: 323 LLHEPPERLHLLASSKLRDLFKQVLGFSCIVDRCFTPHGDPLPFLVHVFMLRDADAEKVR 144
Query: 608 NPGGFLELENVAVVPLL 658
NPGGFLELENV V+ LL
Sbjct: 143 NPGGFLELENVTVIALL 93
Score = 135 bits (289), Expect(3) = 8e-035
Identities = 59/67 (88%), Positives = 61/67 (91%)
Frame = +3 / -3
Query: 420 GGQSFKNHQKDCVF*QAVSFAISSSKYLDSAAKSTGASPLTVILCLFSFMYSCCVTLTRN 599
G SF NHQKDC+F*QAVSFAISSS+YLDSAA STGAS LTVILCLFSFMYSCCVTLTR
Sbjct: 331 GQSSFTNHQKDCIF*QAVSFAISSSRYLDSAA*STGASLLTVILCLFSFMYSCCVTLTRK 152
Query: 600 R*GTQVA 620
R*GTQVA
Sbjct: 151 R*GTQVA 131
Score = 132 bits (282), Expect(3) = 5e-034
Identities = 61/76 (80%), Positives = 66/76 (86%)
Frame = -3 / +2
Query: 656 GGGRQLRSQAQGSHLGSSPVPRQRHTA*IHEREEAENHREG*STGRLRS*VQVLA*RDRE 477
GG QL SQAQGSHLGSSP PRQRH A*IHERE+AE+HRE *STGRL S*+QV A*RDRE
Sbjct: 95 GGR*QLHSQAQGSHLGSSPFPRQRHAA*IHEREKAEDHREE*STGRLCS*IQVPA*RDRE 274
Query: 476 AHRLLEDAVFLVVLEG 429
A+ LLEDA+FLVV EG
Sbjct: 275 AYCLLEDAIFLVVREG 322
Score = 110 bits (234), Expect(3) = 5e-026
Identities = 48/57 (84%), Positives = 50/57 (87%)
Frame = -2 / +1
Query: 657 RRGTTATFSSSRKPPGFLTCSASASHSMNT*TRRGRESP*GVKHRSTSQLSPSTCLK 487
RR T TFSSSRKPPGFLT SASAS SMNT*TR+GR SP*GVKHRST QL+PSTCLK
Sbjct: 94 RRAMTVTFSSSRKPPGFLTFSASASRSMNT*TRKGRGSP*GVKHRSTMQLNPSTCLK 264
Score = 102 bits (217), Expect(3) = 1e-024
Identities = 45/57 (78%), Positives = 46/57 (80%)
Frame = +1 / -1
Query: 487 LQASTWTQLRSRPVLHPSR*FSASSRSCIHAV*R*RGTGEEPRWLP*A*ERSCRPPP 657
LQA TW QL SRPVLH SR* SA SRSCIHA *R*RG GEEPRWLP*A*E +C PP
Sbjct: 264 LQAGTWIQLHSRPVLHSSR*SSAFSRSCIHAA*R*RGKGEEPRWLP*A*ECNCHRPP 94
Score = 34.1 bits (68), Expect(3) = 3e-050
Identities = 10/13 (76%), Positives = 13/13 (100%)
Frame = -2 / +1
Query: 273 CKIAVPIPCICNF 235
C+IAVPIPC+C+F
Sbjct: 490 CRIAVPIPCLCSF 528
Score = 29.9 bits (59), Expect(4) = 3e-043
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = +3 / -3
Query: 234 QSCRYTELELQFCKAY 281
QSCR E ELQFCK +
Sbjct: 529 QSCRDKESELQFCKGF 482
Score = 29.0 bits (57), Expect(3) = 3e-050
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = -2 / +1
Query: 366 VCCSHWVLALL* 331
+CCSHW LALL*
Sbjct: 385 LCCSHWSLALL* 420
Score = 27.6 bits (54), Expect(3) = 5e-034
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -3 / +2
Query: 377 ITVLCVALTGF*HFCKV 327
+ + CVA G *HFCK+
Sbjct: 374 LLLFCVARIGL*HFCKI 424
Score = 26.7 bits (52), Expect(3) = 8e-035
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = +2 / -2
Query: 233 SKLQIHGIGTAILQGL 280
+KLQ GIGTAILQ L
Sbjct: 530 TKLQRQGIGTAILQRL 483
Score = 26.3 bits (51), Expect(4) = 3e-043
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +2 / -2
Query: 317 HLHIPYRSAKTQ*EQH 364
+++I YRSAK Q EQH
Sbjct: 434 NIYISYRSAKDQCEQH 387
Score = 25.8 bits (50), Expect(3) = 5e-026
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = -1 / +3
Query: 364 VLLSLGFSTSVRYM 323
VLL+L FSTSVRY+
Sbjct: 387 VLLALVFSTSVRYV 428
Score = 25.8 bits (50), Expect(4) = 3e-043
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = +1 / -2
Query: 364 HRTVIKLLELK 396
HRTVIKLL+LK
Sbjct: 389 HRTVIKLLQLK 357
Score = 25.8 bits (50), Expect(3) = 8e-035
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = +3 / -3
Query: 327 YLTEVLKPSESNTQ 368
YLTEVLK + SNT+
Sbjct: 424 YLTEVLKTNASNTE 383
Score = 25.8 bits (50), Expect(3) = 1e-024
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +1 / -1
Query: 229 LLKVADTRNWNCNFAR 276
L K A+TRN NCN A+
Sbjct: 534 LNKAAETRNRNCNSAK 487
Score = 25.4 bits (49), Expect(3) = 5e-034
Identities = 10/13 (76%), Positives = 12/13 (92%)
Frame = -1 / +3
Query: 274 LQNCSSNSVYLQL 236
LQNCSS+S+ LQL
Sbjct: 489 LQNCSSDSLSLQL 527
Score = 24.9 bits (48), Expect(3) = 1e-024
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +1 / -1
Query: 325 YTLQKC*NPVRATHRT 372
+ LQKC* P+RAT +
Sbjct: 426 HILQKC*RPMRATQNS 379
Score = 22.1 bits (42), Expect(3) = 5e-026
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = -3 / +2
Query: 278 SLAKLQFQFRVSATL 234
+ A+LQF+F VSA L
Sbjct: 485 AFAELQFRFLVSAAL 529
>gb|CW086376.1|CW086376 104_430_10946936_116_33018_028 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10946936, DNA
sequence
Length = 685
Score = 114 bits (243), Expect(2) = 2e-041
Identities = 44/55 (80%), Positives = 47/55 (85%)
Frame = -1 / +1
Query: 940 KPVFFSLYAIISHIKPDQNMWYRACTTCNKKVTEAFGSGYWCEGCQKNDSECSLR 776
+PVFFSL AIISHIKP+Q+MWYRAC TC KVTEAFGSGYW E C KN SECSLR
Sbjct: 115 QPVFFSLNAIISHIKPEQHMWYRACKTCCNKVTEAFGSGYWSERCNKNASECSLR 279
Score = 102 bits (217), Expect(2) = 1e-036
Identities = 42/55 (76%), Positives = 47/55 (85%)
Frame = +3 / -3
Query: 774 YLSEHSESFFWHPSHQYPDPKASVTFLLQVVQARYHIF*SGLMWLMMAYRLKKTG 938
YLSEHSE+F H S QYP+PKASVT L QV+QARYHI SGLMWLMMA++LKKTG
Sbjct: 281 YLSEHSEAFLLHLSDQYPEPKASVTLLQQVLQARYHICCSGLMWLMMAFKLKKTG 117
Score = 92.3 bits (195), Expect(2) = 4e-033
Identities = 39/52 (75%), Positives = 44/52 (84%)
Frame = +2 / -2
Query: 785 ALRVILLAPLAPVSRPKSFSHLLVTGRASTVPHILIRLDVAYDGIQTEENRL 940
A R IL+A L PVSR KSFSHL+ G AST+PH+L+RLDVAYDGIQTEENRL
Sbjct: 270 AFRGILVASLRPVSRTKSFSHLVAAGLASTIPHMLLRLDVAYDGIQTEENRL 115
Score = 87.2 bits (184), Expect(2) = 6e-029
Identities = 37/52 (71%), Positives = 41/52 (78%)
Frame = +1 / -1
Query: 784 STQSHSFGTPRTSIQTQKLQSPSCYRSCKHGTTYSDQA*CGL*WHTD*RKQA 939
S Q HS +TSIQ QKLQSP C RSCKH TTY+ QA*CGL*WH++*RKQA
Sbjct: 271 SIQRHSCCISQTSIQNQKLQSPCCSRSCKHDTTYAAQA*CGL*WHSN*RKQA 116
Score = 85.8 bits (181), Expect(2) = 1e-027
Identities = 36/52 (69%), Positives = 41/52 (78%)
Frame = -3 / +3
Query: 938 ACFLQSVCHHKPHQA*SEYVVPCLHDL*QEGD*SFWVWILVRGVPKE*L*VL 783
ACFLQ CHHKPHQA*+ YVV CL DL Q+GD*SFW WILV + +E L*+L
Sbjct: 117 ACFLQFECHHKPHQA*AAYVVSCLQDLLQQGD*SFWFWILV*EMQQECL*ML 272
Score = 78.0 bits (164), Expect(2) = 2e-041
Identities = 31/42 (73%), Positives = 33/42 (78%)
Frame = -3 / +2
Query: 779 EIHHGDQALRSHW*GLGVRVQRACGEDHWLQRRRA*SDQERG 654
+IHHG Q S W*G+G RVQR C EDHWLQR RA*SDQERG
Sbjct: 350 QIHHGHQGF*SQW*GMGFRVQRTCREDHWLQR*RA*SDQERG 475
Score = 73.9 bits (155), Expect(2) = 1e-036
Identities = 31/42 (73%), Positives = 33/42 (78%)
Frame = +2 / -3
Query: 656 LFPDPIKLVGAAANDLLRMLVEHGHPSLTSGIGELDHHDVSQ 781
LFPDPIKLV A ANDLL M VEHG+P LT GI LD HDVS+
Sbjct: 473 LFPDPIKLVSAVANDLLCMFVEHGNPCLTIGIRNLDDHDVSE 348
Score = 72.1 bits (151), Expect(2) = 4e-033
Identities = 31/41 (75%), Positives = 34/41 (82%)
Frame = +1 / -2
Query: 655 PLS*SDQARRRCSQ*SSPHAR*TRTPKPHQWDRRA*SP*CI 777
PLS*SDQAR+RCSQ*SS H R*TR P PH WD++ * P*CI
Sbjct: 474 PLS*SDQARQRCSQ*SSLHVR*TRKPMPHHWDQKP**P*CI 352
Score = 62.9 bits (131), Expect(2) = 6e-029
Identities = 24/34 (70%), Positives = 30/34 (88%)
Frame = +3 / -1
Query: 693 PMIFSACSLNTDTQASPVGSESLITMMYLSEHSE 794
PMIFSACSLNT+T ASP+GSE+L+TMMYL + +
Sbjct: 436 PMIFSACSLNTETHASPLGSETLMTMMYLKDEGK 335
Score = 60.2 bits (125), Expect(2) = 1e-027
Identities = 27/41 (65%), Positives = 30/41 (73%)
Frame = -2 / +1
Query: 777 DTXXXXXSPIPLVRLGCPCSTSMRRRSLAAAPTSLIGSGKR 655
DT IP+VR G PCST+M+RRSLA A TSLIGSGKR
Sbjct: 352 DTSWSSRFLIPMVRHGFPCSTNMQRRSLATALTSLIGSGKR 474
>gb|CW291515.1|CW291515 104_771_11413593_148_35573_043 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11413593, DNA
sequence
Length = 646
Score = 114 bits (243), Expect(2) = 2e-041
Identities = 44/55 (80%), Positives = 47/55 (85%)
Frame = -1 / +3
Query: 940 KPVFFSLYAIISHIKPDQNMWYRACTTCNKKVTEAFGSGYWCEGCQKNDSECSLR 776
+PVFFSL AIISHIKP+Q+MWYRAC TC KVTEAFGSGYW E C KN SECSLR
Sbjct: 180 QPVFFSLNAIISHIKPEQHMWYRACKTCCNKVTEAFGSGYWSERCNKNASECSLR 344
Score = 102 bits (217), Expect(2) = 1e-036
Identities = 42/55 (76%), Positives = 47/55 (85%)
Frame = +3 / -1
Query: 774 YLSEHSESFFWHPSHQYPDPKASVTFLLQVVQARYHIF*SGLMWLMMAYRLKKTG 938
YLSEHSE+F H S QYP+PKASVT L QV+QARYHI SGLMWLMMA++LKKTG
Sbjct: 346 YLSEHSEAFLLHLSDQYPEPKASVTLLQQVLQARYHICCSGLMWLMMAFKLKKTG 182
Score = 92.3 bits (195), Expect(2) = 4e-033
Identities = 39/52 (75%), Positives = 44/52 (84%)
Frame = +2 / -3
Query: 785 ALRVILLAPLAPVSRPKSFSHLLVTGRASTVPHILIRLDVAYDGIQTEENRL 940
A R IL+A L PVSR KSFSHL+ G AST+PH+L+RLDVAYDGIQTEENRL
Sbjct: 335 AFRGILVASLRPVSRTKSFSHLVAAGLASTIPHMLLRLDVAYDGIQTEENRL 180
Score = 87.2 bits (184), Expect(2) = 6e-029
Identities = 37/52 (71%), Positives = 41/52 (78%)
Frame = +1 / -2
Query: 784 STQSHSFGTPRTSIQTQKLQSPSCYRSCKHGTTYSDQA*CGL*WHTD*RKQA 939
S Q HS +TSIQ QKLQSP C RSCKH TTY+ QA*CGL*WH++*RKQA
Sbjct: 336 SIQRHSCCISQTSIQNQKLQSPCCSRSCKHDTTYAAQA*CGL*WHSN*RKQA 181
Score = 85.8 bits (181), Expect(2) = 1e-027
Identities = 36/52 (69%), Positives = 41/52 (78%)
Frame = -3 / +2
Query: 938 ACFLQSVCHHKPHQA*SEYVVPCLHDL*QEGD*SFWVWILVRGVPKE*L*VL 783
ACFLQ CHHKPHQA*+ YVV CL DL Q+GD*SFW WILV + +E L*+L
Sbjct: 182 ACFLQFECHHKPHQA*AAYVVSCLQDLLQQGD*SFWFWILV*EMQQECL*ML 337
Score = 78.0 bits (164), Expect(2) = 2e-041
Identities = 31/42 (73%), Positives = 33/42 (78%)
Frame = -3 / +1
Query: 779 EIHHGDQALRSHW*GLGVRVQRACGEDHWLQRRRA*SDQERG 654
+IHHG Q S W*G+G RVQR C EDHWLQR RA*SDQERG
Sbjct: 415 QIHHGHQGF*SQW*GMGFRVQRTCREDHWLQR*RA*SDQERG 540
Score = 73.9 bits (155), Expect(2) = 1e-036
Identities = 31/42 (73%), Positives = 33/42 (78%)
Frame = +2 / -1
Query: 656 LFPDPIKLVGAAANDLLRMLVEHGHPSLTSGIGELDHHDVSQ 781
LFPDPIKLV A ANDLL M VEHG+P LT GI LD HDVS+
Sbjct: 538 LFPDPIKLVSAVANDLLCMFVEHGNPCLTIGIRNLDDHDVSE 413
Score = 72.1 bits (151), Expect(2) = 4e-033
Identities = 31/41 (75%), Positives = 34/41 (82%)
Frame = +1 / -3
Query: 655 PLS*SDQARRRCSQ*SSPHAR*TRTPKPHQWDRRA*SP*CI 777
PLS*SDQAR+RCSQ*SS H R*TR P PH WD++ * P*CI
Sbjct: 539 PLS*SDQARQRCSQ*SSLHVR*TRKPMPHHWDQKP**P*CI 417
Score = 62.9 bits (131), Expect(2) = 6e-029
Identities = 24/34 (70%), Positives = 30/34 (88%)
Frame = +3 / -2
Query: 693 PMIFSACSLNTDTQASPVGSESLITMMYLSEHSE 794
PMIFSACSLNT+T ASP+GSE+L+TMMYL + +
Sbjct: 501 PMIFSACSLNTETHASPLGSETLMTMMYLKDEGK 400
Score = 60.2 bits (125), Expect(2) = 1e-027
Identities = 27/41 (65%), Positives = 30/41 (73%)
Frame = -2 / +3
Query: 777 DTXXXXXSPIPLVRLGCPCSTSMRRRSLAAAPTSLIGSGKR 655
DT IP+VR G PCST+M+RRSLA A TSLIGSGKR
Sbjct: 417 DTSWSSRFLIPMVRHGFPCSTNMQRRSLATALTSLIGSGKR 539
>gb|CW155872.1|CW155872 104_558_11146371_116_36363_006 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11146371, DNA
sequence
Length = 755
Score = 105 bits (225), Expect(2) = 5e-039
Identities = 41/51 (80%), Positives = 43/51 (84%)
Frame = -1 / +3
Query: 928 FSLYAIISHIKPDQNMWYRACTTCNKKVTEAFGSGYWCEGCQKNDSECSLR 776
FSL AIISHIKP+Q+MWYRAC TC KVTEAFGSGYW E C KN SECSLR
Sbjct: 3 FSLNAIISHIKPEQHMWYRACKTCCNKVTEAFGSGYWSERCNKNASECSLR 155
Score = 95.0 bits (201), Expect(2) = 2e-034
Identities = 39/52 (75%), Positives = 44/52 (84%)
Frame = +3 / -2
Query: 774 YLSEHSESFFWHPSHQYPDPKASVTFLLQVVQARYHIF*SGLMWLMMAYRLK 929
YLSEHSE+F H S QYP+PKASVT L QV+QARYHI SGLMWLMMA++LK
Sbjct: 157 YLSEHSEAFLLHLSDQYPEPKASVTLLQQVLQARYHICCSGLMWLMMAFKLK 2
Score = 83.1 bits (175), Expect(2) = 2e-030
Identities = 35/48 (72%), Positives = 40/48 (83%)
Frame = +2 / -1
Query: 785 ALRVILLAPLAPVSRPKSFSHLLVTGRASTVPHILIRLDVAYDGIQTE 928
A R IL+A L PVSR KSFSHL+ G AST+PH+L+RLDVAYDGIQTE
Sbjct: 146 AFRGILVASLRPVSRTKSFSHLVAAGLASTIPHMLLRLDVAYDGIQTE 3
Score = 80.8 bits (170), Expect(2) = 5e-027
Identities = 34/49 (69%), Positives = 38/49 (77%)
Frame = +1 / -3
Query: 784 STQSHSFGTPRTSIQTQKLQSPSCYRSCKHGTTYSDQA*CGL*WHTD*R 930
S Q HS +TSIQ QKLQSP C RSCKH TTY+ QA*CGL*WH++*R
Sbjct: 147 SIQRHSCCISQTSIQNQKLQSPCCSRSCKHDTTYAAQA*CGL*WHSN*R 1
Score = 78.0 bits (164), Expect(2) = 5e-039
Identities = 31/42 (73%), Positives = 33/42 (78%)
Frame = -3 / +1
Query: 779 EIHHGDQALRSHW*GLGVRVQRACGEDHWLQRRRA*SDQERG 654
+IHHG Q S W*G+G RVQR C EDHWLQR RA*SDQERG
Sbjct: 226 QIHHGHQGF*SQW*GMGFRVQRTCREDHWLQR*RA*SDQERG 351
Score = 77.1 bits (162), Expect(2) = 4e-025
Identities = 33/49 (67%), Positives = 38/49 (77%)
Frame = -3 / +2
Query: 929 LQSVCHHKPHQA*SEYVVPCLHDL*QEGD*SFWVWILVRGVPKE*L*VL 783
LQ CHHKPHQA*+ YVV CL DL Q+GD*SFW WILV + +E L*+L
Sbjct: 2 LQFECHHKPHQA*AAYVVSCLQDLLQQGD*SFWFWILV*EMQQECL*ML 148
Score = 73.9 bits (155), Expect(2) = 2e-034
Identities = 31/42 (73%), Positives = 33/42 (78%)
Frame = +2 / -2
Query: 656 LFPDPIKLVGAAANDLLRMLVEHGHPSLTSGIGELDHHDVSQ 781
LFPDPIKLV A ANDLL M VEHG+P LT GI LD HDVS+
Sbjct: 349 LFPDPIKLVSAVANDLLCMFVEHGNPCLTIGIRNLDDHDVSE 224
Score = 72.1 bits (151), Expect(2) = 2e-030
Identities = 31/41 (75%), Positives = 34/41 (82%)
Frame = +1 / -1
Query: 655 PLS*SDQARRRCSQ*SSPHAR*TRTPKPHQWDRRA*SP*CI 777
PLS*SDQAR+RCSQ*SS H R*TR P PH WD++ * P*CI
Sbjct: 350 PLS*SDQARQRCSQ*SSLHVR*TRKPMPHHWDQKP**P*CI 228
Score = 62.9 bits (131), Expect(2) = 5e-027
Identities = 24/34 (70%), Positives = 30/34 (88%)
Frame = +3 / -3
Query: 693 PMIFSACSLNTDTQASPVGSESLITMMYLSEHSE 794
PMIFSACSLNT+T ASP+GSE+L+TMMYL + +
Sbjct: 312 PMIFSACSLNTETHASPLGSETLMTMMYLKDEGK 211
Score = 60.2 bits (125), Expect(2) = 4e-025
Identities = 27/41 (65%), Positives = 30/41 (73%)
Frame = -2 / +3
Query: 777 DTXXXXXSPIPLVRLGCPCSTSMRRRSLAAAPTSLIGSGKR 655
DT IP+VR G PCST+M+RRSLA A TSLIGSGKR
Sbjct: 228 DTSWSSRFLIPMVRHGFPCSTNMQRRSLATALTSLIGSGKR 350
>gb|CW086375.1|CW086375 104_430_10946936_114_33015_028 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10946936, DNA
sequence
Length = 708
Score = 103 bits (219), Expect(2) = 3e-038
Identities = 40/50 (80%), Positives = 42/50 (84%)
Frame = -1 / -3
Query: 925 SLYAIISHIKPDQNMWYRACTTCNKKVTEAFGSGYWCEGCQKNDSECSLR 776
SL AIISHIKP+Q+MWYRAC TC KVTEAFGSGYW E C KN SECSLR
Sbjct: 706 SLNAIISHIKPEQHMWYRACKTCCNKVTEAFGSGYWSERCNKNASECSLR 557
Score = 92.7 bits (196), Expect(2) = 7e-034
Identities = 38/51 (74%), Positives = 43/51 (84%)
Frame = +3 / +3
Query: 774 YLSEHSESFFWHPSHQYPDPKASVTFLLQVVQARYHIF*SGLMWLMMAYRL 926
YLSEHSE+F H S QYP+PKASVT L QV+QARYHI SGLMWLMMA++L
Sbjct: 555 YLSEHSEAFLLHLSDQYPEPKASVTLLQQVLQARYHICCSGLMWLMMAFKL 707
Score = 80.8 bits (170), Expect(2) = 9e-030
Identities = 34/47 (72%), Positives = 39/47 (82%)
Frame = +2 / +2
Query: 785 ALRVILLAPLAPVSRPKSFSHLLVTGRASTVPHILIRLDVAYDGIQT 925
A R IL+A L PVSR KSFSHL+ G AST+PH+L+RLDVAYDGIQT
Sbjct: 566 AFRGILVASLRPVSRTKSFSHLVAAGLASTIPHMLLRLDVAYDGIQT 706
Score = 78.5 bits (165), Expect(2) = 2e-026
Identities = 33/48 (68%), Positives = 37/48 (77%)
Frame = +1 / +1
Query: 784 STQSHSFGTPRTSIQTQKLQSPSCYRSCKHGTTYSDQA*CGL*WHTD* 927
S Q HS +TSIQ QKLQSP C RSCKH TTY+ QA*CGL*WH++*
Sbjct: 565 SIQRHSCCISQTSIQNQKLQSPCCSRSCKHDTTYAAQA*CGL*WHSN* 708
Score = 78.0 bits (164), Expect(2) = 3e-038
Identities = 31/42 (73%), Positives = 33/42 (78%)
Frame = -3 / -1
Query: 779 EIHHGDQALRSHW*GLGVRVQRACGEDHWLQRRRA*SDQERG 654
+IHHG Q S W*G+G RVQR C EDHWLQR RA*SDQERG
Sbjct: 486 QIHHGHQGF*SQW*GMGFRVQRTCREDHWLQR*RA*SDQERG 361
Score = 75.3 bits (158), Expect(2) = 1e-024
Identities = 32/48 (66%), Positives = 37/48 (77%)
Frame = -3 / -2
Query: 926 QSVCHHKPHQA*SEYVVPCLHDL*QEGD*SFWVWILVRGVPKE*L*VL 783
Q CHHKPHQA*+ YVV CL DL Q+GD*SFW WILV + +E L*+L
Sbjct: 707 QFECHHKPHQA*AAYVVSCLQDLLQQGD*SFWFWILV*EMQQECL*ML 564
Score = 73.9 bits (155), Expect(2) = 7e-034
Identities = 31/42 (73%), Positives = 33/42 (78%)
Frame = +2 / +3
Query: 656 LFPDPIKLVGAAANDLLRMLVEHGHPSLTSGIGELDHHDVSQ 781
LFPDPIKLV A ANDLL M VEHG+P LT GI LD HDVS+
Sbjct: 363 LFPDPIKLVSAVANDLLCMFVEHGNPCLTIGIRNLDDHDVSE 488
Score = 72.1 bits (151), Expect(2) = 9e-030
Identities = 31/41 (75%), Positives = 34/41 (82%)
Frame = +1 / +2
Query: 655 PLS*SDQARRRCSQ*SSPHAR*TRTPKPHQWDRRA*SP*CI 777
PLS*SDQAR+RCSQ*SS H R*TR P PH WD++ * P*CI
Sbjct: 362 PLS*SDQARQRCSQ*SSLHVR*TRKPMPHHWDQKP**P*CI 484
Score = 62.9 bits (131), Expect(2) = 2e-026
Identities = 24/34 (70%), Positives = 30/34 (88%)
Frame = +3 / +1
Query: 693 PMIFSACSLNTDTQASPVGSESLITMMYLSEHSE 794
PMIFSACSLNT+T ASP+GSE+L+TMMYL + +
Sbjct: 400 PMIFSACSLNTETHASPLGSETLMTMMYLKDEGK 501
Score = 60.2 bits (125), Expect(2) = 1e-024
Identities = 27/41 (65%), Positives = 30/41 (73%)
Frame = -2 / -3
Query: 777 DTXXXXXSPIPLVRLGCPCSTSMRRRSLAAAPTSLIGSGKR 655
DT IP+VR G PCST+M+RRSLA A TSLIGSGKR
Sbjct: 484 DTSWSSRFLIPMVRHGFPCSTNMQRRSLATALTSLIGSGKR 362
>gb|CW177945.1|CW177945 104_591_11159301_148_36608_087 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11159301, DNA
sequence
Length = 710
Score = 102 bits (217), Expect(2) = 2e-037
Identities = 39/44 (88%), Positives = 39/44 (88%)
Frame = -3 / +2
Query: 1286 WQNCYYFSLE*SCYYDWPRAFGHG*QFSCCCDKEPKSI*LPRRV 1155
WQNC YFSLE*SCYY WPRAFGHG*QFSCCCDKEPKSI* R V
Sbjct: 557 WQNC*YFSLE*SCYYYWPRAFGHG*QFSCCCDKEPKSI*FSRYV 688
Score = 97.7 bits (207), Expect(2) = 2e-031
Identities = 42/45 (93%), Positives = 44/45 (97%)
Frame = -1 / +3
Query: 1288 SGKTVTISLWNDLATTTGQELLDMVDSSPVVAIKSLKVSDFQGVS 1154
SGKTV+ISLWNDLATTTGQELLDMVDSSPVVAIKSLKVSDF G+S
Sbjct: 555 SGKTVSISLWNDLATTTGQELLDMVDSSPVVAIKSLKVSDFPGMS 689
Score = 96.4 bits (204), Expect(2) = 2e-036
Identities = 41/44 (93%), Positives = 42/44 (95%)
Frame = +3 / -2
Query: 1155 DTPWKSDTFRLFIATTGELSTMSKSSWPVVVARSFQREIVTVLP 1286
D P KSDTFRLFIATTGELSTMSKSSWPVVVARSFQREI+TVLP
Sbjct: 688 DIPGKSDTFRLFIATTGELSTMSKSSWPVVVARSFQREILTVLP 557
Score = 89.0 bits (188), Expect(2) = 8e-031
Identities = 37/43 (86%), Positives = 40/43 (93%)
Frame = +2 / -1
Query: 1157 HALEVRYF*ALYRNNRRTVNHVQKLLASRSSKIIPERNSNSFA 1285
H ++RYF*ALYRNNRRTVNHVQKLLAS SSKIIPERN+NSFA
Sbjct: 686 HTWKIRYF*ALYRNNRRTVNHVQKLLASSSSKIIPERNTNSFA 558
Score = 82.2 bits (173), Expect(2) = 2e-036
Identities = 30/37 (81%), Positives = 33/37 (89%)
Frame = +2 / -3
Query: 1280 FARVICYNNVTLRYCLVVNLSPNTECGRYALNHTNNI 1390
+ RVICYNNVTL YCL+VNLSPN ECGRY LNHT+NI
Sbjct: 120 YLRVICYNNVTLWYCLIVNLSPNAECGRYTLNHTDNI 10
Score = 79.9 bits (168), Expect(2) = 2e-037
Identities = 34/35 (97%), Positives = 35/35 (100%)
Frame = -1 / +1
Query: 1390 DIVGVVQSVSPTLSVRRKIDNETIPKRDIVVADDS 1286
DI+GVVQSVSPTLSVRRKIDNETIPKRDIVVADDS
Sbjct: 10 DIIGVVQSVSPTLSVRRKIDNETIPKRDIVVADDS 114
Score = 70.7 bits (148), Expect(2) = 8e-031
Identities = 29/36 (80%), Positives = 31/36 (86%)
Frame = +1 / -2
Query: 1288 SHLLQQCHASVLSRCQSFS*H*VWEIRSEPHQQYLQ 1395
SHLLQQCHA VLS CQSFS* *VWEI SEPH+ YL+
Sbjct: 112 SHLLQQCHALVLSHCQSFS*R*VWEIHSEPHR*YLK 5
Score = 63.8 bits (133), Expect(2) = 2e-031
Identities = 29/35 (82%), Positives = 30/35 (85%)
Frame = -3 / +3
Query: 1391 RYCWCGSERISHTQC*EKD*QRDNTEA*HCCSR*L 1287
RY CGSE ISHTQ *EKD*Q DNT+A*HCCSR*L
Sbjct: 9 RYYRCGSECISHTQR*EKD*Q*DNTKA*HCCSR*L 113
>gb|CW291514.1|CW291514 104_771_11413593_116_35569_043 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11413593, DNA
sequence
Length = 653
Score = 98.2 bits (208), Expect(2) = 1e-036
Identities = 39/50 (78%), Positives = 41/50 (82%)
Frame = -1 / -3
Query: 925 SLYAIISHIKPDQNMWYRACTTCNKKVTEAFGSGYWCEGCQKNDSECSLR 776
SL AIISHIKP+Q+MWYRAC T KVTEAFGSGYW E C KN SECSLR
Sbjct: 651 SLNAIISHIKPEQHMWYRACKTXCNKVTEAFGSGYWSERCNKNASECSLR 502
Score = 90.0 bits (190), Expect(2) = 5e-033
Identities = 37/51 (72%), Positives = 42/51 (82%)
Frame = +3 / +2
Query: 774 YLSEHSESFFWHPSHQYPDPKASVTFLLQVVQARYHIF*SGLMWLMMAYRL 926
YLSEHSE+F H S QYP+PKASVT L V+QARYHI SGLMWLMMA++L
Sbjct: 500 YLSEHSEAFLLHLSDQYPEPKASVTLLQXVLQARYHICCSGLMWLMMAFKL 652
Score = 78.0 bits (164), Expect(2) = 6e-029
Identities = 33/47 (70%), Positives = 38/47 (80%)
Frame = +2 / +1
Query: 785 ALRVILLAPLAPVSRPKSFSHLLVTGRASTVPHILIRLDVAYDGIQT 925
A R IL+A L PVSR KSFSHL+ AST+PH+L+RLDVAYDGIQT
Sbjct: 511 AFRGILVASLRPVSRTKSFSHLVAASLASTIPHMLLRLDVAYDGIQT 651
Score = 78.0 bits (164), Expect(2) = 1e-036
Identities = 31/42 (73%), Positives = 33/42 (78%)
Frame = -3 / -1
Query: 779 EIHHGDQALRSHW*GLGVRVQRACGEDHWLQRRRA*SDQERG 654
+IHHG Q S W*G+G RVQR C EDHWLQR RA*SDQERG
Sbjct: 431 QIHHGHQGF*SQW*GMGFRVQRTCREDHWLQR*RA*SDQERG 306
Score = 75.8 bits (159), Expect(2) = 2e-025
Identities = 32/48 (66%), Positives = 36/48 (75%)
Frame = +1 / +3
Query: 784 STQSHSFGTPRTSIQTQKLQSPSCYRSCKHGTTYSDQA*CGL*WHTD* 927
S Q HS +TSIQ QKLQSP C SCKH TTY+ QA*CGL*WH++*
Sbjct: 510 SIQRHSCCISQTSIQNQKLQSPCCSXSCKHDTTYAAQA*CGL*WHSN* 653
Score = 73.9 bits (155), Expect(2) = 5e-033
Identities = 31/42 (73%), Positives = 33/42 (78%)
Frame = +2 / +2
Query: 656 LFPDPIKLVGAAANDLLRMLVEHGHPSLTSGIGELDHHDVSQ 781
LFPDPIKLV A ANDLL M VEHG+P LT GI LD HDVS+
Sbjct: 308 LFPDPIKLVSAVANDLLCMFVEHGNPCLTIGIRNLDDHDVSE 433
Score = 73.0 bits (153), Expect(2) = 7e-024
Identities = 31/48 (64%), Positives = 36/48 (75%)
Frame = -3 / -2
Query: 926 QSVCHHKPHQA*SEYVVPCLHDL*QEGD*SFWVWILVRGVPKE*L*VL 783
Q CHHKPHQA*+ YVV CL D Q+GD*SFW WILV + +E L*+L
Sbjct: 652 QFECHHKPHQA*AAYVVSCLQDXLQQGD*SFWFWILV*EMQQECL*ML 509
Score = 72.1 bits (151), Expect(2) = 6e-029
Identities = 31/41 (75%), Positives = 34/41 (82%)
Frame = +1 / +1
Query: 655 PLS*SDQARRRCSQ*SSPHAR*TRTPKPHQWDRRA*SP*CI 777
PLS*SDQAR+RCSQ*SS H R*TR P PH WD++ * P*CI
Sbjct: 307 PLS*SDQARQRCSQ*SSLHVR*TRKPMPHHWDQKP**P*CI 429
Score = 62.9 bits (131), Expect(2) = 2e-025
Identities = 24/34 (70%), Positives = 30/34 (88%)
Frame = +3 / +3
Query: 693 PMIFSACSLNTDTQASPVGSESLITMMYLSEHSE 794
PMIFSACSLNT+T ASP+GSE+L+TMMYL + +
Sbjct: 345 PMIFSACSLNTETHASPLGSETLMTMMYLKDEGK 446
Score = 60.2 bits (125), Expect(2) = 7e-024
Identities = 27/41 (65%), Positives = 30/41 (73%)
Frame = -2 / -3
Query: 777 DTXXXXXSPIPLVRLGCPCSTSMRRRSLAAAPTSLIGSGKR 655
DT IP+VR G PCST+M+RRSLA A TSLIGSGKR
Sbjct: 429 DTSWSSRFLIPMVRHGFPCSTNMQRRSLATALTSLIGSGKR 307
>gb|CW228616.1|CW228616 104_668_11206476_148_37249_038 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11206476, DNA
sequence
Length = 302
Score = 101 bits (215), Expect(2) = 3e-021
Identities = 41/52 (78%), Positives = 45/52 (86%)
Frame = -1 / +1
Query: 811 GCQKNDSECSLRYIMVIKLSDPTGEAWVSVFNEHAEKIIGCSADELDRIRKE 656
G + + S RYIMV+K+SDPTGEAWVSVFNEHAEKIIGCSADELDRIRKE
Sbjct: 4 GAKSDCFPASFRYIMVLKISDPTGEAWVSVFNEHAEKIIGCSADELDRIRKE 159
Score = 23.1 bits (44), Expect(2) = 3e-021
Identities = 7/12 (58%), Positives = 11/12 (91%)
Frame = -1 / +1
Query: 658 EEGDDSYVLKLK 623
+EGDDSY+ +L+
Sbjct: 265 QEGDDSYISQLR 300
>gb|CL156768.1|CL156768 104_344_10783092_116_31374_036 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10783092, DNA
sequence
Length = 691
Score = 70.3 bits (147), Expect(3) = 6e-021
Identities = 26/58 (44%), Positives = 41/58 (70%)
Frame = -1 / +1
Query: 1207 SPVVAIKSLKVSDFQGVSLSTIGRSTLEINPDLPEAKNLKSWYDSEGKDTSLAPISAE 1034
+P++A+ ++SDF G S+STIG + L+INPD P+A+ L+ WY +EG T+ +S E
Sbjct: 208 NPILALIGARISDFSGRSVSTIGSTQLKINPDFPDAERLRQWYVTEGMTTACLSLSRE 381
Score = 43.2 bits (88), Expect(3) = 6e-021
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = -1 / +1
Query: 859 CNKKVTEAFGSGYWCEGCQKNDSECSLRYIMVIKLSDPTGEAWVSVF 719
CNKKV ++ ++CE C K+ C RY++ ++ D T + F
Sbjct: 550 CNKKVIDSGDGIWFCERCDKSSGSCEYRYMVKFRIQDHTSTIIATAF 690
Score = 32.7 bits (65), Expect(3) = 6e-021
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = -1 / +1
Query: 1333 DNETIPKRDIVVADDSGKTVTISLWNDLATTTGQEL 1226
D KR + + D SG++V ++ W D GQ+L
Sbjct: 76 DGTQTQKRTLQLRDMSGRSVGVTFWGDFCDVEGQQL 183
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,913,375,105
Number of Sequences: 832831
Number of extensions: 29583918
Number of successful extensions: 150194
Number of sequences better than 1.0e-020: 20
length of database: 163,786,556
effective HSP length: 56
effective length of database: 117,148,020
effective search space used: 55879605540
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)