TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2253513.2.1
(746 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CF070980.1|CF070980 FE1_14_F12.g1_A002 Iron-deficient se... 328 e-102
gb|CN149194.1|CN149194 WOUND1_61_F10.b1_A002 Wounded leaves... 332 e-100
gb|BF587532.1|BF587532 FM1_37_E11.g1_A003 Floral-Induced Me... 313 1e-096
gb|CN140420.1|CN140420 OX1_36_B10.b1_A002 Oxidatively-stres... 288 8e-094
gb|CF482490.1|CF482490 POL1_7_F08.b1_A002 Pollen Sorghum bi... 177 1e-065
gb|CL197598.1|CL197598 104_424_10943847_114_32384_054 Sorgh... 155 2e-063
gb|CW082577.1|CW082577 104_424_10943847_114_32335_054 Sorgh... 154 5e-063
gb|CF487333.1|CF487333 POL1_43_D11.b1_A002 Pollen Sorghum b... 234 1e-060
gb|CW144377.1|CW144377 104_536_11137911_148_34962_056 Sorgh... 177 5e-055
gb|BG101797.1|BG101797 RHIZ2_22_E09.g1_A003 Rhizome2 (RHIZ2... 197 1e-049
gb|CN127460.1|CN127460 RHOH1_23_D06.b1_A002 Acid- and alkal... 188 6e-047
gb|CX612893.1|CX612893 GABR1_5_C04.b1_A002 GA- or brassinol... 188 6e-047
gb|CD234655.1|CD234655 SS1_17_C07.b1_A012 Salt-stressed see... 181 1e-044
gb|CW306008.1|CW306008 104_791_11466607_148_36273_024 Sorgh... 141 3e-043
gb|BM331533.1|BM331533 PIC1_72_D10.g1_A002 Pathogen-infecte... 173 2e-042
gb|BM329584.1|BM329584 PIC1_40_E09.g1_A002 Pathogen-infecte... 170 2e-041
gb|CW285991.1|CW285991 104_763_11410641_116_35511_039 Sorgh... 167 1e-040
gb|BI139893.1|BI139893 IP1_47_A12.b1_A002 Immature pannicle... 123 6e-038
gb|CL158360.1|CL158360 104_347_10803488_114_31377_080 Sorgh... 142 5e-033
gb|CL158361.1|CL158361 104_347_10803488_116_31378_080 Sorgh... 142 5e-033
gb|CW285992.1|CW285992 104_763_11410641_148_35507_039 Sorgh... 127 3e-028
gb|CW381875.1|CW381875 fsbb001f063h19k0 Sorghum methylation... 120 2e-026
gb|CF480371.1|CF480371 POL1_65_H05.b1_A002 Pollen Sorghum b... 113 3e-024
gb|CF769345.1|CF769345 DSBF1_1_C05.b1_A010 Drought-stressed... 107 2e-022
gb|CW451706.1|CW451706 fsbb001f191o09k0 Sorghum methylation... 55 8e-022
>gb|CF070980.1|CF070980 FE1_14_F12.g1_A002 Iron-deficient seedlings Sorghum bicolor cDNA
clone FE1_14_F12_A002 5', mRNA sequence
Length = 692
Score = 328 bits (710), Expect(5) = e-102
Identities = 125/126 (99%), Positives = 125/126 (99%)
Frame = +3 / -1
Query: 3 NACGWAYGMNFFDLDSWRREKCTEQYHYWQNQNENRTLWKLGTLPPGLITFYSTTKPLEK 182
NACG AYGMNFFDLDSWRREKCTEQYHYWQNQNENRTLWKLGTLPPGLITFYSTTKPLEK
Sbjct: 671 NACGGAYGMNFFDLDSWRREKCTEQYHYWQNQNENRTLWKLGTLPPGLITFYSTTKPLEK 492
Query: 183 SWHVLGLGYNPSISMEEIRNAAVVHFNGNMKPWLDIGMNQFRHLWTKYVDYDDSYIRQCN 362
SWHVLGLGYNPSISMEEIRNAAVVHFNGNMKPWLDIGMNQFRHLWTKYVDYDDSYIRQCN
Sbjct: 491 SWHVLGLGYNPSISMEEIRNAAVVHFNGNMKPWLDIGMNQFRHLWTKYVDYDDSYIRQCN 312
Query: 363 FAPP*K 380
FAPP*K
Sbjct: 311 FAPP*K 294
Score = 296 bits (640), Expect(5) = 1e-092
Identities = 123/126 (97%), Positives = 124/126 (98%)
Frame = -2 / +1
Query: 379 FYGGAKLH*RIYESS*STYFVQRCLNWFIPMSSQGFMLPLKCTTAAFLISSMLMLGLYPS 200
FYGGAKLH*RIYESS*STYFVQRCLNWFIPMSSQGF+LPLKCTTAAFLISSMLMLGLYPS
Sbjct: 295 FYGGAKLH*RIYESS*STYFVQRCLNWFIPMSSQGFILPLKCTTAAFLISSMLMLGLYPS 474
Query: 199 PRTCQDFSRGFVVE*KVIKPGGSVPSFHNVLFSF*FCQ*WYCSVHFSLLQESRSKKFIPY 20
PRTCQDFSRGFVVE*KVIKPGGSVPSFHNV FSF*FCQ*WYCSVHFSLLQESRSKKFIPY
Sbjct: 475 PRTCQDFSRGFVVE*KVIKPGGSVPSFHNVRFSF*FCQ*WYCSVHFSLLQESRSKKFIPY 654
Query: 19 AHPQAL 2
A PQAL
Sbjct: 655 APPQAL 672
Score = 248 bits (537), Expect(4) = 4e-073
Identities = 109/127 (85%), Positives = 113/127 (88%)
Frame = +2 / -3
Query: 2 *CLWMGIRNEFLRS*FLEEGEMY*AVPLLAESE*EQDIMEARNAAPWLDHFLLDNKTSGE 181
*CLW GIRNEFL S*FLEEGE+Y*AVPLLAESE E DIMEARNA P L+HFLL +KTS E
Sbjct: 672 *CLWWGIRNEFL*S*FLEEGEVY*AVPLLAESEREPDIMEARNATPRLNHFLLHHKTS*E 493
Query: 182 ILACSWTWIQS*HQHGGD*KCCCCAFQRQHEALAGHRYEPVQAPLDKVCGL**LIYSSMQ 361
ILACSWTWIQS HQHGGD*KCCCCAFQ Q+EALA HRYEPVQAPLDKV GL**LIYSSMQ
Sbjct: 492 ILACSWTWIQSKHQHGGD*KCCCCAFQWQYEALA*HRYEPVQAPLDKVRGL**LIYSSMQ 313
Query: 362 FCTAIEG 382
F T IEG
Sbjct: 312 FRTTIEG 292
Score = 246 bits (531), Expect(4) = 1e-073
Identities = 108/126 (85%), Positives = 110/126 (87%)
Frame = -3 / +2
Query: 378 SMAVQNCIDEYMSHHSPHTLSKGA*TGSYRCPARASCCR*NAQQQHF*SPPC*C*DCIQV 199
SM V+NCIDEYMSHHSP TLSKGA*TGSYRC ARAS C *NAQQQHF*SPPC*C DCIQV
Sbjct: 296 SMVVRNCIDEYMSHHSPRTLSKGA*TGSYRCQARASYCH*NAQQQHF*SPPC*CLDCIQV 475
Query: 198 QEHAKISPEVLLSSRK*SSQGAAFLASIMSCSHSDSANNGTAQYISPSSKNQDRRNSFRM 19
QEHAKIS EVL SRK* S G AFLASIMS S SDSANNGTAQY SPSSKNQD+RNSFRM
Sbjct: 476 QEHAKISQEVLWWSRK*LSLGVAFLASIMSGSRSDSANNGTAQYTSPSSKNQDQRNSFRM 655
Query: 18 PIHRH* 1
P HRH*
Sbjct: 656 PHHRH* 673
Score = 243 bits (525), Expect(2) = 3e-068
Identities = 111/127 (87%), Positives = 112/127 (88%)
Frame = +1 / -2
Query: 1 LMPVDGHTE*ISSILILGGGRNVLSSTIIGRIRMRTGHYGS*ERCPLA*SLSTRQQNLWR 180
LMPV GHTE*IS ILILGGGR+VLSSTIIGRIR RTGHYGS*ER P A*SLST QNL R
Sbjct: 673 LMPVVGHTE*ISLILILGGGRSVLSSTIIGRIRTRTGHYGS*ERYPQA*SLSTPPQNLLR 494
Query: 181 NLGMFLDLDTILASAWRRLEMLLLCISTAT*SPGWTSV*TSSGTFGQSMWTMMTHIFVNA 360
NLGMFLDLDTI ASAWRRLEMLLLCIS A *SPG TSV*TSSGTFGQS WTMMTHIFVNA
Sbjct: 493 NLGMFLDLDTIQASAWRRLEMLLLCISMAI*SPGLTSV*TSSGTFGQSTWTMMTHIFVNA 314
Query: 361 ILHRHRR 381
I H HRR
Sbjct: 313 ISHHHRR 293
Score = 170 bits (365), Expect(2) = 3e-051
Identities = 72/86 (83%), Positives = 79/86 (91%)
Frame = -1 / +3
Query: 383 NLLWRCKIALTNI*VIIVHILCPKVPELVHTDVQPGLHVAVEMHNSSISNLLHADARIVS 204
+LLW C+IALTNI*VIIVH+LCPKVPELVHTDV+PGLH+A+EMHNSSISNLLHADA IVS
Sbjct: 291 SLLWWCEIALTNI*VIIVHVLCPKVPELVHTDVKPGLHIAIEMHNSSISNLLHADAWIVS 470
Query: 203 KSKNMPRFLQRFCCRVESDQARGQRS 126
KSKNMPRFL+RFC VESD A G RS
Sbjct: 471 KSKNMPRFLKRFCGGVESD*AWG*RS 548
Score = 53.3 bits (110), Expect(2) = 3e-051
Identities = 20/23 (86%), Positives = 22/23 (95%)
Frame = -1 / +3
Query: 71 STFLPPPRIKIEEIHSVCPSTGI 3
ST LPPPRIKI+EIHSVCP+TGI
Sbjct: 603 STLLPPPRIKIKEIHSVCPTTGI 671
Score = 45.1 bits (92), Expect(5) = e-102
Identities = 18/23 (78%), Positives = 20/23 (86%)
Frame = +1 / -3
Query: 460 GVSRVQLKGPPQSFLAHNVCH*L 528
GVS+VQLKGPPQ FL H VCH*+
Sbjct: 159 GVSQVQLKGPPQFFLDHIVCH*V 91
Score = 44.1 bits (90), Expect(4) = 4e-073
Identities = 17/24 (70%), Positives = 21/24 (87%)
Frame = +2 / -1
Query: 452 RDKEFLEYN*RDHHNLF*LIMFAI 523
R KEFL+YN*RDHHN F*+I++ I
Sbjct: 167 RFKEFLKYN*RDHHNSF*IILYVI 96
Score = 42.3 bits (86), Expect(5) = 1e-092
Identities = 18/27 (66%), Positives = 20/27 (74%)
Frame = -3 / +1
Query: 525 LMANIMS*KRLWWSLQLYSRNSLSLQK 445
LM M *K LWWSLQLY RNSL+L +
Sbjct: 94 LMTYNMI*KELWWSLQLYLRNSLNLYR 174
Score = 41.8 bits (85), Expect(4) = 1e-073
Identities = 15/19 (78%), Positives = 18/19 (94%)
Frame = -1 / +2
Query: 515 TL*ARKDCGGPFSCTLETP 459
T+*+RK+CGGPFSCT ETP
Sbjct: 104 TI*SRKNCGGPFSCT*ETP 160
Score = 36.8 bits (74), Expect(2) = 3e-068
Identities = 17/27 (62%), Positives = 19/27 (70%)
Frame = +3 / -2
Query: 444 FSVEIRSF*STTEGTTTIFSSS*CLPL 524
F + RSF STTEGTTTI S S C+ L
Sbjct: 175 FCRDSRSFSSTTEGTTTILSRSYCMSL 95
Score = 29.0 bits (57), Expect(5) = e-102
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +2 / -2
Query: 431 CRKHVFCRD 457
CRKHVFCRD
Sbjct: 190 CRKHVFCRD 164
Score = 28.6 bits (56), Expect(5) = 1e-092
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = -1 / +1
Query: 551 CGKHYFDHN 525
CGKHYF+HN
Sbjct: 67 CGKHYFNHN 93
Score = 28.1 bits (55), Expect(5) = e-102
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = +3 / -2
Query: 555 LHEHYCRCVC 584
+HEHY RCVC
Sbjct: 67 IHEHYYRCVC 38
Score = 25.4 bits (49), Expect(4) = 1e-073
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = -1 / +1
Query: 455 LYRKRACGI 429
LYRKRACGI
Sbjct: 166 LYRKRACGI 192
Score = 25.4 bits (49), Expect(5) = 1e-092
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = -3 / +3
Query: 456 SLQKTCLRH 430
SLQKTCLRH
Sbjct: 165 SLQKTCLRH 191
Score = 25.4 bits (49), Expect(5) = 1e-092
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -3 / +1
Query: 585 NTHNDNNAH 559
N HNDNNAH
Sbjct: 37 NIHNDNNAH 63
Score = 22.6 bits (43), Expect(4) = 1e-073
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -2 / +3
Query: 586 *HTQRQ*CSC 557
*HTQR *CSC
Sbjct: 36 *HTQR**CSC 65
Score = 22.1 bits (42), Expect(4) = 4e-073
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +1 / -1
Query: 430 MPQARFL*R 456
MPQARFL*R
Sbjct: 191 MPQARFL*R 165
Score = 21.7 bits (41), Expect(4) = 4e-073
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = +3 / -3
Query: 525 VMIKVMFAT 551
VM+KVMFAT
Sbjct: 93 VMVKVMFAT 67
Score = 21.7 bits (41), Expect(5) = e-102
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = +2 / -2
Query: 518 AISYDQSNVCHM 553
++SY SNVCH+
Sbjct: 100 SLSYG*SNVCHI 65
>gb|CN149194.1|CN149194 WOUND1_61_F10.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_61_F10_A002 3', mRNA sequence
Length = 807
Score = 332 bits (720), Expect(3) = e-100
Identities = 125/126 (99%), Positives = 126/126 (100%)
Frame = +3 / +2
Query: 3 NACGWAYGMNFFDLDSWRREKCTEQYHYWQNQNENRTLWKLGTLPPGLITFYSTTKPLEK 182
NACGWAYGMNFFDLDSWRREKCTEQYHYWQNQNENRTLWKLGTLPPGLITFYSTTKPLE+
Sbjct: 179 NACGWAYGMNFFDLDSWRREKCTEQYHYWQNQNENRTLWKLGTLPPGLITFYSTTKPLER 358
Query: 183 SWHVLGLGYNPSISMEEIRNAAVVHFNGNMKPWLDIGMNQFRHLWTKYVDYDDSYIRQCN 362
SWHVLGLGYNPSISMEEIRNAAVVHFNGNMKPWLDIGMNQFRHLWTKYVDYDDSYIRQCN
Sbjct: 359 SWHVLGLGYNPSISMEEIRNAAVVHFNGNMKPWLDIGMNQFRHLWTKYVDYDDSYIRQCN 538
Query: 363 FAPP*K 380
FAPP*K
Sbjct: 539 FAPP*K 556
Score = 296 bits (640), Expect(4) = 2e-090
Identities = 123/126 (97%), Positives = 123/126 (97%)
Frame = -2 / -1
Query: 379 FYGGAKLH*RIYESS*STYFVQRCLNWFIPMSSQGFMLPLKCTTAAFLISSMLMLGLYPS 200
FYGGAKLH*RIYESS*STYFVQRCLNWFIPMSSQGFMLPLKCTTAAFLISSMLMLGLYPS
Sbjct: 555 FYGGAKLH*RIYESS*STYFVQRCLNWFIPMSSQGFMLPLKCTTAAFLISSMLMLGLYPS 376
Query: 199 PRTCQDFSRGFVVE*KVIKPGGSVPSFHNVLFSF*FCQ*WYCSVHFSLLQESRSKKFIPY 20
PRTCQD SRGFVVE*KVIKPGGSVPSFHNV FSF*FCQ*WYCSVHFSLLQESRSKKFIPY
Sbjct: 375 PRTCQDLSRGFVVE*KVIKPGGSVPSFHNVRFSF*FCQ*WYCSVHFSLLQESRSKKFIPY 196
Query: 19 AHPQAL 2
A PQAL
Sbjct: 195 AQPQAL 178
Score = 253 bits (546), Expect(3) = 3e-074
Identities = 110/127 (86%), Positives = 114/127 (89%)
Frame = +2 / +1
Query: 2 *CLWMGIRNEFLRS*FLEEGEMY*AVPLLAESE*EQDIMEARNAAPWLDHFLLDNKTSGE 181
*CLW+GIRNEFL S*FLEEGE+Y*AVPLLAESE E DIMEARNA P L+HFLL +KTS E
Sbjct: 178 *CLWLGIRNEFL*S*FLEEGEVY*AVPLLAESEREPDIMEARNATPRLNHFLLHHKTS*E 357
Query: 182 ILACSWTWIQS*HQHGGD*KCCCCAFQRQHEALAGHRYEPVQAPLDKVCGL**LIYSSMQ 361
ILACSWTWIQS HQHGGD*KCCCCAFQ QHEALA HRYEPVQAPLDKV GL**LIYSSMQ
Sbjct: 358 ILACSWTWIQSKHQHGGD*KCCCCAFQWQHEALA*HRYEPVQAPLDKVRGL**LIYSSMQ 537
Query: 362 FCTAIEG 382
F T IEG
Sbjct: 538 FRTTIEG 558
Score = 251 bits (542), Expect(3) = 6e-074
Identities = 109/126 (86%), Positives = 111/126 (88%)
Frame = -3 / -2
Query: 378 SMAVQNCIDEYMSHHSPHTLSKGA*TGSYRCPARASCCR*NAQQQHF*SPPC*C*DCIQV 199
SM V+NCIDEYMSHHSP TLSKGA*TGSYRC ARASCC *NAQQQHF*SPPC*C DCIQV
Sbjct: 554 SMVVRNCIDEYMSHHSPRTLSKGA*TGSYRCQARASCCH*NAQQQHF*SPPC*CLDCIQV 375
Query: 198 QEHAKISPEVLLSSRK*SSQGAAFLASIMSCSHSDSANNGTAQYISPSSKNQDRRNSFRM 19
QEHAKIS EVL SRK* S G AFLASIMS S SDSANNGTAQY SPSSKNQD+RNSFRM
Sbjct: 374 QEHAKISQEVLWWSRK*LSLGVAFLASIMSGSRSDSANNGTAQYTSPSSKNQDQRNSFRM 195
Query: 18 PIHRH* 1
P HRH*
Sbjct: 194 PNHRH* 177
Score = 243 bits (526), Expect(4) = 4e-069
Identities = 111/127 (87%), Positives = 113/127 (88%)
Frame = +1 / +3
Query: 1 LMPVDGHTE*ISSILILGGGRNVLSSTIIGRIRMRTGHYGS*ERCPLA*SLSTRQQNLWR 180
LMPV GHTE*IS ILILGGGR+VLSSTIIGRIR RTGHYGS*ER P A*SLST QNL R
Sbjct: 177 LMPVVGHTE*ISLILILGGGRSVLSSTIIGRIRTRTGHYGS*ERYPQA*SLSTPPQNLLR 356
Query: 181 NLGMFLDLDTILASAWRRLEMLLLCISTAT*SPGWTSV*TSSGTFGQSMWTMMTHIFVNA 360
+LGMFLDLDTI ASAWRRLEMLLLCIS AT*SPG TSV*TSSGTFGQS WTMMTHIFVNA
Sbjct: 357 DLGMFLDLDTIQASAWRRLEMLLLCISMAT*SPGLTSV*TSSGTFGQSTWTMMTHIFVNA 536
Query: 361 ILHRHRR 381
I H HRR
Sbjct: 537 ISHHHRR 557
Score = 166 bits (358), Expect(2) = 3e-050
Identities = 72/86 (83%), Positives = 78/86 (90%)
Frame = -1 / -3
Query: 383 NLLWRCKIALTNI*VIIVHILCPKVPELVHTDVQPGLHVAVEMHNSSISNLLHADARIVS 204
+LLW C+IALTNI*VIIVH+LCPKVPELVHTDV+PGLHVA+EMHNSSISNLLHADA IVS
Sbjct: 559 SLLWWCEIALTNI*VIIVHVLCPKVPELVHTDVKPGLHVAIEMHNSSISNLLHADAWIVS 380
Query: 203 KSKNMPRFLQRFCCRVESDQARGQRS 126
KSKNMPR L+RFC VESD A G RS
Sbjct: 379 KSKNMPRSLKRFCGGVESD*AWG*RS 302
Score = 53.3 bits (110), Expect(2) = 3e-050
Identities = 20/23 (86%), Positives = 22/23 (95%)
Frame = -1 / -3
Query: 71 STFLPPPRIKIEEIHSVCPSTGI 3
ST LPPPRIKI+EIHSVCP+TGI
Sbjct: 247 STLLPPPRIKIKEIHSVCPTTGI 179
Score = 45.1 bits (92), Expect(3) = e-100
Identities = 18/23 (78%), Positives = 20/23 (86%)
Frame = +1 / +1
Query: 460 GVSRVQLKGPPQSFLAHNVCH*L 528
GVS+VQLKGPPQ FL H VCH*+
Sbjct: 691 GVSQVQLKGPPQFFLDHIVCH*V 759
Score = 44.1 bits (90), Expect(3) = 3e-074
Identities = 17/24 (70%), Positives = 21/24 (87%)
Frame = +2 / +2
Query: 452 RDKEFLEYN*RDHHNLF*LIMFAI 523
R KEFL+YN*RDHHN F*+I++ I
Sbjct: 683 RFKEFLKYN*RDHHNSF*IILYVI 754
Score = 42.3 bits (86), Expect(4) = 2e-090
Identities = 18/27 (66%), Positives = 20/27 (74%)
Frame = -3 / -1
Query: 525 LMANIMS*KRLWWSLQLYSRNSLSLQK 445
LM M *K LWWSLQLY RNSL+L +
Sbjct: 756 LMTYNMI*KELWWSLQLYLRNSLNLYR 676
Score = 41.8 bits (85), Expect(3) = 6e-074
Identities = 15/19 (78%), Positives = 18/19 (94%)
Frame = -1 / -2
Query: 515 TL*ARKDCGGPFSCTLETP 459
T+*+RK+CGGPFSCT ETP
Sbjct: 746 TI*SRKNCGGPFSCT*ETP 690
Score = 36.8 bits (74), Expect(4) = 4e-069
Identities = 17/27 (62%), Positives = 19/27 (70%)
Frame = +3 / +3
Query: 444 FSVEIRSF*STTEGTTTIFSSS*CLPL 524
F + RSF STTEGTTTI S S C+ L
Sbjct: 675 FCRDSRSFSSTTEGTTTILSRSYCMSL 755
Score = 29.0 bits (57), Expect(3) = e-100
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +2 / +3
Query: 431 CRKHVFCRD 457
CRKHVFCRD
Sbjct: 660 CRKHVFCRD 686
Score = 28.6 bits (56), Expect(4) = 2e-090
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = -1 / -1
Query: 551 CGKHYFDHN 525
CGKHYF+HN
Sbjct: 783 CGKHYFNHN 757
Score = 25.4 bits (49), Expect(3) = 6e-074
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = -1 / -1
Query: 455 LYRKRACGI 429
LYRKRACGI
Sbjct: 684 LYRKRACGI 658
Score = 25.4 bits (49), Expect(4) = 2e-090
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = -3 / -3
Query: 456 SLQKTCLRH 430
SLQKTCLRH
Sbjct: 685 SLQKTCLRH 659
Score = 22.1 bits (42), Expect(3) = 3e-074
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +1 / +2
Query: 430 MPQARFL*R 456
MPQARFL*R
Sbjct: 659 MPQARFL*R 685
Score = 21.7 bits (41), Expect(4) = 4e-069
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = +2 / +3
Query: 518 AISYDQSNVCHM 553
++SY SNVCH+
Sbjct: 750 SLSYG*SNVCHI 785
Score = 21.7 bits (41), Expect(4) = 4e-069
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = +3 / +1
Query: 432 AASTFSVEIR 461
AASTFSVEI+
Sbjct: 661 AASTFSVEIQ 690
>gb|BF587532.1|BF587532 FM1_37_E11.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 632
Score = 313 bits (678), Expect(4) = 1e-096
Identities = 120/121 (99%), Positives = 120/121 (99%)
Frame = +3 / +1
Query: 18 AYGMNFFDLDSWRREKCTEQYHYWQNQNENRTLWKLGTLPPGLITFYSTTKPLEKSWHVL 197
AYGMNFFDLDSWRREKCTEQYHYWQNQNENRTLWKLGTLP GLITFYSTTKPLEKSWHVL
Sbjct: 1 AYGMNFFDLDSWRREKCTEQYHYWQNQNENRTLWKLGTLPXGLITFYSTTKPLEKSWHVL 180
Query: 198 GLGYNPSISMEEIRNAAVVHFNGNMKPWLDIGMNQFRHLWTKYVDYDDSYIRQCNFAPP* 377
GLGYNPSISMEEIRNAAVVHFNGNMKPWLDIGMNQFRHLWTKYVDYDDSYIRQCNFAPP*
Sbjct: 181 GLGYNPSISMEEIRNAAVVHFNGNMKPWLDIGMNQFRHLWTKYVDYDDSYIRQCNFAPP* 360
Query: 378 K 380
K
Sbjct: 361 K 363
Score = 284 bits (615), Expect(5) = 2e-087
Identities = 118/120 (98%), Positives = 118/120 (98%)
Frame = -2 / -1
Query: 379 FYGGAKLH*RIYESS*STYFVQRCLNWFIPMSSQGFMLPLKCTTAAFLISSMLMLGLYPS 200
FYGGAKLH*RIYESS*STYFVQRCLNWFIPMSSQGFMLPLKCTTAAFLISSMLMLGLYPS
Sbjct: 362 FYGGAKLH*RIYESS*STYFVQRCLNWFIPMSSQGFMLPLKCTTAAFLISSMLMLGLYPS 183
Query: 199 PRTCQDFSRGFVVE*KVIKPGGSVPSFHNVLFSF*FCQ*WYCSVHFSLLQESRSKKFIPY 20
PRTCQDFSRGFVVE*KVIKP GSVPSFHNV FSF*FCQ*WYCSVHFSLLQESRSKKFIPY
Sbjct: 182 PRTCQDFSRGFVVE*KVIKPXGSVPSFHNVRFSF*FCQ*WYCSVHFSLLQESRSKKFIPY 3
Score = 236 bits (509), Expect(4) = 6e-070
Identities = 103/120 (85%), Positives = 105/120 (87%)
Frame = -3 / -2
Query: 378 SMAVQNCIDEYMSHHSPHTLSKGA*TGSYRCPARASCCR*NAQQQHF*SPPC*C*DCIQV 199
SM V+NCIDEYMSHHSP TLSKGA*TGSYRC ARASCC *NAQQQHF*SPPC*C DCIQV
Sbjct: 361 SMVVRNCIDEYMSHHSPRTLSKGA*TGSYRCQARASCCH*NAQQQHF*SPPC*CLDCIQV 182
Query: 198 QEHAKISPEVLLSSRK*SSQGAAFLASIMSCSHSDSANNGTAQYISPSSKNQDRRNSFRM 19
QEHAKIS EVL SRK* S AFLASIMS S SDSANNGTAQY SPSSKNQD+RNSFRM
Sbjct: 181 QEHAKISQEVLWWSRK*LSLXVAFLASIMSGSRSDSANNGTAQYTSPSSKNQDQRNSFRM 2
Score = 235 bits (508), Expect(3) = 2e-068
Identities = 107/121 (88%), Positives = 108/121 (89%)
Frame = +1 / +2
Query: 19 HTE*ISSILILGGGRNVLSSTIIGRIRMRTGHYGS*ERCPLA*SLSTRQQNLWRNLGMFL 198
HTE*IS ILILGGGR+VLSSTIIGRIR RTGHYGS*ER P A*SLST QNL RNLGMFL
Sbjct: 2 HTE*ISLILILGGGRSVLSSTIIGRIRTRTGHYGS*ERYPQA*SLSTPPQNLLRNLGMFL 181
Query: 199 DLDTILASAWRRLEMLLLCISTAT*SPGWTSV*TSSGTFGQSMWTMMTHIFVNAILHRHR 378
DLDTI ASAWRRLEMLLLCIS AT*SPG TSV*TSSGTFGQS WTMMTHIFVNAI H HR
Sbjct: 182 DLDTIQASAWRRLEMLLLCISMAT*SPGLTSV*TSSGTFGQSTWTMMTHIFVNAISHHHR 361
Query: 379 R 381
R
Sbjct: 362 R 364
Score = 233 bits (504), Expect(3) = 2e-065
Identities = 104/121 (85%), Positives = 107/121 (88%)
Frame = +2 / +3
Query: 20 IRNEFLRS*FLEEGEMY*AVPLLAESE*EQDIMEARNAAPWLDHFLLDNKTSGEILACSW 199
IRNEFL S*FLEEGE+Y*AVPLLAESE E DIMEARNA L+HFLL +KTS EILACSW
Sbjct: 3 IRNEFL*S*FLEEGEVY*AVPLLAESEREPDIMEARNATXRLNHFLLHHKTS*EILACSW 182
Query: 200 TWIQS*HQHGGD*KCCCCAFQRQHEALAGHRYEPVQAPLDKVCGL**LIYSSMQFCTAIE 379
TWIQS HQHGGD*KCCCCAFQ QHEALA HRYEPVQAPLDKV GL**LIYSSMQF T IE
Sbjct: 183 TWIQSKHQHGGD*KCCCCAFQWQHEALA*HRYEPVQAPLDKVRGL**LIYSSMQFRTTIE 362
Query: 380 G 382
G
Sbjct: 363 G 365
Score = 171 bits (368), Expect(2) = 2e-048
Identities = 73/86 (84%), Positives = 79/86 (91%)
Frame = -1 / -3
Query: 383 NLLWRCKIALTNI*VIIVHILCPKVPELVHTDVQPGLHVAVEMHNSSISNLLHADARIVS 204
+LLW C+IALTNI*VIIVH+LCPKVPELVHTDV+PGLHVA+EMHNSSISNLLHADA IVS
Sbjct: 366 SLLWWCEIALTNI*VIIVHVLCPKVPELVHTDVKPGLHVAIEMHNSSISNLLHADAWIVS 187
Query: 203 KSKNMPRFLQRFCCRVESDQARGQRS 126
KSKNMPRFL+RFC VESD A G RS
Sbjct: 186 KSKNMPRFLKRFCGGVESD*AXG*RS 109
Score = 42.8 bits (87), Expect(2) = 2e-048
Identities = 16/18 (88%), Positives = 17/18 (94%)
Frame = -1 / -3
Query: 71 STFLPPPRIKIEEIHSVC 18
ST LPPPRIKI+EIHSVC
Sbjct: 54 STLLPPPRIKIKEIHSVC 1
Score = 42.3 bits (86), Expect(4) = 1e-096
Identities = 17/23 (73%), Positives = 19/23 (82%)
Frame = +1 / +3
Query: 460 GVSRVQLKGPPQSFLAHNVCH*L 528
GVS+VQ KGPPQ FL H VCH*+
Sbjct: 498 GVSQVQQKGPPQFFLDHIVCH*V 566
Score = 41.8 bits (85), Expect(3) = 2e-068
Identities = 16/24 (66%), Positives = 20/24 (83%)
Frame = +2 / +1
Query: 452 RDKEFLEYN*RDHHNLF*LIMFAI 523
R KEFL+YN RDHHN F*+I++ I
Sbjct: 490 RFKEFLKYNRRDHHNSF*IILYVI 561
Score = 39.6 bits (80), Expect(5) = 2e-087
Identities = 14/19 (73%), Positives = 17/19 (89%)
Frame = -1 / -2
Query: 515 TL*ARKDCGGPFSCTLETP 459
T+*+RK+CGGPF CT ETP
Sbjct: 553 TI*SRKNCGGPFCCT*ETP 497
Score = 39.1 bits (79), Expect(4) = 6e-070
Identities = 17/27 (62%), Positives = 19/27 (70%)
Frame = -3 / -1
Query: 525 LMANIMS*KRLWWSLQLYSRNSLSLQK 445
LM M *K LWWSL LY RNSL+L +
Sbjct: 563 LMTYNMI*KELWWSLLLYLRNSLNLYR 483
Score = 36.8 bits (74), Expect(3) = 2e-065
Identities = 17/27 (62%), Positives = 19/27 (70%)
Frame = +3 / +2
Query: 444 FSVEIRSF*STTEGTTTIFSSS*CLPL 524
F + RSF STTEGTTTI S S C+ L
Sbjct: 482 FCRDSRSFSSTTEGTTTILSRSYCMSL 562
Score = 29.0 bits (57), Expect(4) = 1e-096
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +2 / +2
Query: 431 CRKHVFCRD 457
CRKHVFCRD
Sbjct: 467 CRKHVFCRD 493
Score = 28.1 bits (55), Expect(4) = 1e-096
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = +3 / +2
Query: 555 LHEHYCRCVC 584
+HEHY RCVC
Sbjct: 590 IHEHYYRCVC 619
Score = 25.8 bits (50), Expect(5) = 2e-087
Identities = 7/9 (77%), Positives = 9/9 (100%)
Frame = -1 / -1
Query: 551 CGKHYFDHN 525
CGK+YF+HN
Sbjct: 590 CGKYYFNHN 564
Score = 25.4 bits (49), Expect(4) = 6e-070
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = -1 / -1
Query: 455 LYRKRACGI 429
LYRKRACGI
Sbjct: 491 LYRKRACGI 465
Score = 25.4 bits (49), Expect(5) = 2e-087
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = -3 / -3
Query: 456 SLQKTCLRH 430
SLQKTCLRH
Sbjct: 492 SLQKTCLRH 466
Score = 25.4 bits (49), Expect(5) = 2e-087
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -3 / -1
Query: 585 NTHNDNNAH 559
N HNDNNAH
Sbjct: 620 NIHNDNNAH 594
Score = 22.6 bits (43), Expect(4) = 6e-070
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -2 / -3
Query: 586 *HTQRQ*CSC 557
*HTQR *CSC
Sbjct: 621 *HTQR**CSC 592
Score = 22.1 bits (42), Expect(3) = 2e-068
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +1 / +1
Query: 430 MPQARFL*R 456
MPQARFL*R
Sbjct: 466 MPQARFL*R 492
Score = 21.7 bits (41), Expect(3) = 2e-065
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = +3 / +3
Query: 432 AASTFSVEIR 461
AASTFSVEI+
Sbjct: 468 AASTFSVEIQ 497
>gb|CN140420.1|CN140420 OX1_36_B10.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_36_B10_A002 3', mRNA sequence
Length = 836
Score = 288 bits (624), Expect(4) = 8e-094
Identities = 108/108 (100%), Positives = 108/108 (100%)
Frame = +3 / +3
Query: 3 NACGWAYGMNFFDLDSWRREKCTEQYHYWQNQNENRTLWKLGTLPPGLITFYSTTKPLEK 182
NACGWAYGMNFFDLDSWRREKCTEQYHYWQNQNENRTLWKLGTLPPGLITFYSTTKPLEK
Sbjct: 282 NACGWAYGMNFFDLDSWRREKCTEQYHYWQNQNENRTLWKLGTLPPGLITFYSTTKPLEK 461
Query: 183 SWHVLGLGYNPSISMEEIRNAAVVHFNGNMKPWLDIGMNQFRHLWTKY 326
SWHVLGLGYNPSISMEEIRNAAVVHFNGNMKPWLDIGMNQFRHLWTKY
Sbjct: 462 SWHVLGLGYNPSISMEEIRNAAVVHFNGNMKPWLDIGMNQFRHLWTKY 605
Score = 259 bits (560), Expect(5) = 1e-087
Identities = 106/108 (98%), Positives = 106/108 (98%)
Frame = -2 / -2
Query: 325 YFVQRCLNWFIPMSSQGFMLPLKCTTAAFLISSMLMLGLYPSPRTCQDFSRGFVVE*KVI 146
YFVQRCLNWFIPMSSQGFMLPLKCTTAAFLISSMLMLGLYPSPRTCQDFSRGFVVE*KVI
Sbjct: 604 YFVQRCLNWFIPMSSQGFMLPLKCTTAAFLISSMLMLGLYPSPRTCQDFSRGFVVE*KVI 425
Query: 145 KPGGSVPSFHNVLFSF*FCQ*WYCSVHFSLLQESRSKKFIPYAHPQAL 2
KPGGSVPSFHNV FSF*FCQ*WYCSVHFSLLQESRSKKFIPYA PQAL
Sbjct: 424 KPGGSVPSFHNVRFSF*FCQ*WYCSVHFSLLQESRSKKFIPYAQPQAL 281
Score = 223 bits (481), Expect(4) = 3e-071
Identities = 94/108 (87%), Positives = 98/108 (90%)
Frame = +2 / +2
Query: 2 *CLWMGIRNEFLRS*FLEEGEMY*AVPLLAESE*EQDIMEARNAAPWLDHFLLDNKTSGE 181
*CLW+GIRNEFL S*FLEEGE+Y*AVPLLAESE E DIMEARNA P L+HFLL +KTS E
Sbjct: 281 *CLWLGIRNEFL*S*FLEEGEVY*AVPLLAESEREPDIMEARNATPRLNHFLLHHKTS*E 460
Query: 182 ILACSWTWIQS*HQHGGD*KCCCCAFQRQHEALAGHRYEPVQAPLDKV 325
ILACSWTWIQS HQHGGD*KCCCCAFQ QHEALA HRYEPVQAPLDKV
Sbjct: 461 ILACSWTWIQSKHQHGGD*KCCCCAFQWQHEALA*HRYEPVQAPLDKV 604
Score = 211 bits (455), Expect(3) = 7e-065
Identities = 94/108 (87%), Positives = 95/108 (87%)
Frame = -3 / -3
Query: 324 TLSKGA*TGSYRCPARASCCR*NAQQQHF*SPPC*C*DCIQVQEHAKISPEVLLSSRK*S 145
TLSKGA*TGSYRC ARASCC *NAQQQHF*SPPC*C DCIQVQEHAKIS EVL SRK*
Sbjct: 603 TLSKGA*TGSYRCQARASCCH*NAQQQHF*SPPC*CLDCIQVQEHAKISQEVLWWSRK*L 424
Query: 144 SQGAAFLASIMSCSHSDSANNGTAQYISPSSKNQDRRNSFRMPIHRH* 1
S G AFLASIMS S SDSANNGTAQY SPSSKNQD+RNSFRMP HRH*
Sbjct: 423 SLGVAFLASIMSGSRSDSANNGTAQYTSPSSKNQDQRNSFRMPNHRH* 280
Score = 204 bits (441), Expect(3) = 1e-062
Identities = 96/108 (88%), Positives = 97/108 (89%)
Frame = +1 / +1
Query: 1 LMPVDGHTE*ISSILILGGGRNVLSSTIIGRIRMRTGHYGS*ERCPLA*SLSTRQQNLWR 180
LMPV GHTE*IS ILILGGGR+VLSSTIIGRIR RTGHYGS*ER P A*SLST QNL R
Sbjct: 280 LMPVVGHTE*ISLILILGGGRSVLSSTIIGRIRTRTGHYGS*ERYPQA*SLSTPPQNLLR 459
Query: 181 NLGMFLDLDTILASAWRRLEMLLLCISTAT*SPGWTSV*TSSGTFGQS 324
NLGMFLDLDTI ASAWRRLEMLLLCIS AT*SPG TSV*TSSGTFGQS
Sbjct: 460 NLGMFLDLDTIQASAWRRLEMLLLCISMAT*SPGLTSV*TSSGTFGQS 603
Score = 135 bits (289), Expect(3) = 8e-041
Identities = 60/77 (77%), Positives = 65/77 (84%)
Frame = -1 / -1
Query: 356 LTNI*VIIVHILCPKVPELVHTDVQPGLHVAVEMHNSSISNLLHADARIVSKSKNMPRFL 177
L I V+ +LCPKVPELVHTDV+PGLHVA+EMHNSSISNLLHADA IVSKSKNMPRFL
Sbjct: 635 LERIVVVPSVVLCPKVPELVHTDVKPGLHVAIEMHNSSISNLLHADAWIVSKSKNMPRFL 456
Query: 176 QRFCCRVESDQARGQRS 126
+RFC VESD A G RS
Sbjct: 455 KRFCGGVESD*AWG*RS 405
Score = 56.1 bits (116), Expect(5) = 1e-087
Identities = 21/22 (95%), Positives = 21/22 (95%)
Frame = -1 / -2
Query: 671 KYIRHFTSWIHVNRNISDFGIY 606
KYIRHFTSWIHVN NISDFGIY
Sbjct: 796 KYIRHFTSWIHVN*NISDFGIY 731
Score = 54.7 bits (113), Expect(4) = 8e-094
Identities = 20/24 (83%), Positives = 22/24 (91%)
Frame = +1 / +3
Query: 604 LYMPKSDIFLFTWIQEVKCLMYLQ 675
+YMPKSDIF FTWIQEVKCLMY +
Sbjct: 729 MYMPKSDIF*FTWIQEVKCLMYFK 800
Score = 53.3 bits (110), Expect(3) = 8e-041
Identities = 20/23 (86%), Positives = 22/23 (95%)
Frame = -1 / -1
Query: 71 STFLPPPRIKIEEIHSVCPSTGI 3
ST LPPPRIKI+EIHSVCP+TGI
Sbjct: 350 STLLPPPRIKIKEIHSVCPTTGI 282
Score = 52.4 bits (108), Expect(4) = 3e-071
Identities = 22/31 (70%), Positives = 24/31 (77%)
Frame = +2 / +1
Query: 578 CVLVMSAILCICRSQIYFCSRGSKK*SV*CI 670
CV + +CICRSQIYF RGSKK*SV*CI
Sbjct: 703 CVCYLHNAVCICRSQIYFSLRGSKK*SV*CI 795
Score = 48.3 bits (99), Expect(3) = 1e-062
Identities = 20/22 (90%), Positives = 21/22 (95%)
Frame = +3 / +2
Query: 606 VYAEVRYISVHVDPRSKVSDVF 671
VYAEVRYI V+VDPRSKVSDVF
Sbjct: 731 VYAEVRYILVYVDPRSKVSDVF 796
Score = 48.3 bits (99), Expect(3) = 7e-065
Identities = 19/23 (82%), Positives = 21/23 (91%)
Frame = -3 / -1
Query: 669 IHQTLYFLDPREQKYI*LRHIQS 601
IHQTLYFLDPR+ KYI*LRHI +
Sbjct: 794 IHQTLYFLDPRKLKYI*LRHIHT 726
Score = 39.6 bits (80), Expect(4) = 8e-094
Identities = 15/22 (68%), Positives = 18/22 (81%)
Frame = +1 / +2
Query: 463 VSRVQLKGPPQSFLAHNVCH*L 528
+ +VQLKGPPQ FL H VCH*+
Sbjct: 593 LDKVQLKGPPQFFLDHIVCH*V 658
Score = 37.7 bits (76), Expect(5) = 1e-087
Identities = 13/16 (81%), Positives = 16/16 (100%)
Frame = -1 / -3
Query: 515 TL*ARKDCGGPFSCTL 468
T+*+RK+CGGPFSCTL
Sbjct: 645 TI*SRKNCGGPFSCTL 598
Score = 34.1 bits (68), Expect(4) = 3e-071
Identities = 12/18 (66%), Positives = 16/18 (88%)
Frame = +2 / +3
Query: 470 EYN*RDHHNLF*LIMFAI 523
+YN*RDHHN F*+I++ I
Sbjct: 600 KYN*RDHHNSF*IILYVI 653
Score = 31.8 bits (63), Expect(3) = 7e-065
Identities = 13/18 (72%), Positives = 13/18 (72%)
Frame = -3 / -2
Query: 525 LMANIMS*KRLWWSLQLY 472
LM M *K LWWSLQLY
Sbjct: 655 LMTYNMI*KELWWSLQLY 602
Score = 30.9 bits (61), Expect(3) = 1e-062
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = +3 / +1
Query: 471 STTEGTTTIFSSS*CLPL 524
STTEGTTTI S S C+ L
Sbjct: 601 STTEGTTTILSRSYCMSL 654
Score = 28.6 bits (56), Expect(5) = 1e-087
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = -1 / -2
Query: 551 CGKHYFDHN 525
CGKHYF+HN
Sbjct: 682 CGKHYFNHN 656
Score = 24.4 bits (47), Expect(4) = 8e-094
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = +2 / +1
Query: 518 AISYDQSNVCHMTA*ALLSLCVLVMSAILC 607
++SY SNVCH+ +C L + +C
Sbjct: 649 SLSYG*SNVCHIHEQYYRCVCYLHNAVCIC 738
Score = 22.6 bits (43), Expect(5) = 1e-087
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = -3 / -2
Query: 585 NTHNDNNAH 559
N HNDN AH
Sbjct: 712 NIHNDNTAH 686
Score = 21.7 bits (41), Expect(4) = 3e-071
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = +3 / +2
Query: 525 VMIKVMFAT 551
VM+KVMFAT
Sbjct: 656 VMVKVMFAT 682
Score = 21.7 bits (41), Expect(3) = 8e-041
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = -2 / -3
Query: 631 EIYLTSAYT 605
+IYLTSAYT
Sbjct: 756 KIYLTSAYT 730
>gb|CF482490.1|CF482490 POL1_7_F08.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_7_F08_A002 3', mRNA sequence
Length = 521
Score = 177 bits (381), Expect(6) = 1e-065
Identities = 68/68 (100%), Positives = 68/68 (100%)
Frame = +3 / +2
Query: 177 EKSWHVLGLGYNPSISMEEIRNAAVVHFNGNMKPWLDIGMNQFRHLWTKYVDYDDSYIRQ 356
EKSWHVLGLGYNPSISMEEIRNAAVVHFNGNMKPWLDIGMNQFRHLWTKYVDYDDSYIRQ
Sbjct: 2 EKSWHVLGLGYNPSISMEEIRNAAVVHFNGNMKPWLDIGMNQFRHLWTKYVDYDDSYIRQ 181
Query: 357 CNFAPP*K 380
CNFAPP*K
Sbjct: 182 CNFAPP*K 205
Score = 164 bits (353), Expect(6) = 8e-059
Identities = 67/68 (98%), Positives = 67/68 (98%)
Frame = -2 / -3
Query: 379 FYGGAKLH*RIYESS*STYFVQRCLNWFIPMSSQGFMLPLKCTTAAFLISSMLMLGLYPS 200
FYGGAKLH*RIYESS*STYFVQRCLNWFIPMSSQGFM PLKCTTAAFLISSMLMLGLYPS
Sbjct: 204 FYGGAKLH*RIYESS*STYFVQRCLNWFIPMSSQGFMFPLKCTTAAFLISSMLMLGLYPS 25
Query: 199 PRTCQDFS 176
PRTCQDFS
Sbjct: 24 PRTCQDFS 1
Score = 148 bits (318), Expect(5) = 5e-049
Identities = 61/69 (88%), Positives = 66/69 (95%)
Frame = -1 / -2
Query: 383 NLLWRCKIALTNI*VIIVHILCPKVPELVHTDVQPGLHVAVEMHNSSISNLLHADARIVS 204
+LLW C+IALTNI*VIIVH+LCPKVPELVHTDV+PGLHV +EMHNSSISNLLHADA IVS
Sbjct: 208 SLLWWCEIALTNI*VIIVHVLCPKVPELVHTDVKPGLHVPIEMHNSSISNLLHADAWIVS 29
Query: 203 KSKNMPRFL 177
KSKNMPRFL
Sbjct: 28 KSKNMPRFL 2
Score = 148 bits (318), Expect(5) = 5e-051
Identities = 61/68 (89%), Positives = 62/68 (91%)
Frame = +2 / +1
Query: 179 EILACSWTWIQS*HQHGGD*KCCCCAFQRQHEALAGHRYEPVQAPLDKVCGL**LIYSSM 358
EILACSWTWIQS HQHGGD*KCCCCAFQ +HEALA HRYEPVQAPLDKV GL**LIYSSM
Sbjct: 4 EILACSWTWIQSKHQHGGD*KCCCCAFQWEHEALA*HRYEPVQAPLDKVRGL**LIYSSM 183
Query: 359 QFCTAIEG 382
QF T IEG
Sbjct: 184 QFRTTIEG 207
Score = 146 bits (313), Expect(2) = 4e-034
Identities = 60/67 (89%), Positives = 61/67 (91%)
Frame = -3 / -1
Query: 378 SMAVQNCIDEYMSHHSPHTLSKGA*TGSYRCPARASCCR*NAQQQHF*SPPC*C*DCIQV 199
SM V+NCIDEYMSHHSP TLSKGA*TGSYRC ARASC *NAQQQHF*SPPC*C DCIQV
Sbjct: 203 SMVVRNCIDEYMSHHSPRTLSKGA*TGSYRCQARASCSH*NAQQQHF*SPPC*CLDCIQV 24
Query: 198 QEHAKIS 178
QEHAKIS
Sbjct: 23 QEHAKIS 3
Score = 142 bits (304), Expect(4) = 2e-041
Identities = 61/68 (89%), Positives = 61/68 (89%)
Frame = +1 / +3
Query: 178 RNLGMFLDLDTILASAWRRLEMLLLCISTAT*SPGWTSV*TSSGTFGQSMWTMMTHIFVN 357
RNLGMFLDLDTI ASAWRRLEMLLLCIS T*SPG TSV*TSSGTFGQS WTMMTHIFVN
Sbjct: 3 RNLGMFLDLDTIQASAWRRLEMLLLCISMGT*SPGLTSV*TSSGTFGQSTWTMMTHIFVN 182
Query: 358 AILHRHRR 381
AI H HRR
Sbjct: 183 AISHHHRR 206
Score = 45.1 bits (92), Expect(6) = 1e-065
Identities = 18/23 (78%), Positives = 20/23 (86%)
Frame = +1 / +1
Query: 460 GVSRVQLKGPPQSFLAHNVCH*L 528
GVS+VQLKGPPQ FL H VCH*+
Sbjct: 340 GVSQVQLKGPPQFFLDHIVCH*V 408
Score = 44.1 bits (90), Expect(5) = 5e-051
Identities = 17/24 (70%), Positives = 21/24 (87%)
Frame = +2 / +2
Query: 452 RDKEFLEYN*RDHHNLF*LIMFAI 523
R KEFL+YN*RDHHN F*+I++ I
Sbjct: 332 RFKEFLKYN*RDHHNSF*IILYVI 403
Score = 42.3 bits (86), Expect(6) = 8e-059
Identities = 18/27 (66%), Positives = 20/27 (74%)
Frame = -3 / -3
Query: 525 LMANIMS*KRLWWSLQLYSRNSLSLQK 445
LM M *K LWWSLQLY RNSL+L +
Sbjct: 405 LMTYNMI*KELWWSLQLYLRNSLNLYR 325
Score = 41.8 bits (85), Expect(6) = 1e-065
Identities = 15/23 (65%), Positives = 17/23 (73%)
Frame = +2 / +3
Query: 578 CVLVMSAILCICRSQIYFCSRGS 646
CV + +CICRSQIYFC RGS
Sbjct: 453 CVCYLHNAVCICRSQIYFCLRGS 521
Score = 41.8 bits (85), Expect(5) = 5e-049
Identities = 15/19 (78%), Positives = 18/19 (94%)
Frame = -1 / -1
Query: 515 TL*ARKDCGGPFSCTLETP 459
T+*+RK+CGGPFSCT ETP
Sbjct: 395 TI*SRKNCGGPFSCT*ETP 339
Score = 37.7 bits (76), Expect(5) = 5e-051
Identities = 13/14 (92%), Positives = 14/14 (100%)
Frame = +1 / +2
Query: 604 LYMPKSDIFLFTWI 645
+YMPKSDIFLFTWI
Sbjct: 479 MYMPKSDIFLFTWI 520
Score = 36.8 bits (74), Expect(4) = 2e-041
Identities = 17/27 (62%), Positives = 19/27 (70%)
Frame = +3 / +3
Query: 444 FSVEIRSF*STTEGTTTIFSSS*CLPL 524
F + RSF STTEGTTTI S S C+ L
Sbjct: 324 FCRDSRSFSSTTEGTTTILSRSYCMSL 404
Score = 33.6 bits (67), Expect(6) = 8e-059
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = -1 / -3
Query: 644 IHVNRNISDFGIY 606
IHVN+NISDFGIY
Sbjct: 519 IHVNKNISDFGIY 481
Score = 31.8 bits (63), Expect(5) = 5e-049
Identities = 12/15 (80%), Positives = 14/15 (93%)
Frame = -3 / -2
Query: 645 DPREQKYI*LRHIQS 601
DPR+QKYI*LRHI +
Sbjct: 520 DPRKQKYI*LRHIHT 476
Score = 29.0 bits (57), Expect(6) = 1e-065
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +2 / +3
Query: 431 CRKHVFCRD 457
CRKHVFCRD
Sbjct: 309 CRKHVFCRD 335
Score = 28.6 bits (56), Expect(6) = 8e-059
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = -1 / -3
Query: 551 CGKHYFDHN 525
CGKHYF+HN
Sbjct: 432 CGKHYFNHN 406
Score = 28.1 bits (55), Expect(6) = 1e-065
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = +3 / +3
Query: 555 LHEHYCRCVC 584
+HEHY RCVC
Sbjct: 432 IHEHYYRCVC 461
Score = 27.6 bits (54), Expect(4) = 2e-041
Identities = 11/13 (84%), Positives = 12/13 (92%)
Frame = +3 / +1
Query: 606 VYAEVRYISVHVD 644
VYAEVRYI V+VD
Sbjct: 481 VYAEVRYIFVYVD 519
Score = 25.4 bits (49), Expect(6) = 8e-059
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = -3 / -2
Query: 456 SLQKTCLRH 430
SLQKTCLRH
Sbjct: 334 SLQKTCLRH 308
Score = 25.4 bits (49), Expect(5) = 5e-049
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = -1 / -3
Query: 455 LYRKRACGI 429
LYRKRACGI
Sbjct: 333 LYRKRACGI 307
Score = 25.4 bits (49), Expect(6) = 8e-059
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -3 / -3
Query: 585 NTHNDNNAH 559
N HNDNNAH
Sbjct: 462 NIHNDNNAH 436
Score = 24.4 bits (47), Expect(5) = 5e-051
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = +2 / +3
Query: 518 AISYDQSNVCHMTA*ALLSLCVLVMSAILC 607
++SY SNVCH+ +C L + +C
Sbjct: 399 SLSYG*SNVCHIHEHYYRCVCYLHNAVCIC 488
Score = 22.6 bits (43), Expect(5) = 5e-049
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -2 / -2
Query: 586 *HTQRQ*CSC 557
*HTQR *CSC
Sbjct: 463 *HTQR**CSC 434
Score = 22.1 bits (42), Expect(5) = 5e-051
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +1 / +2
Query: 430 MPQARFL*R 456
MPQARFL*R
Sbjct: 308 MPQARFL*R 334
Score = 21.7 bits (41), Expect(6) = 1e-065
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = +3 / +1
Query: 525 VMIKVMFAT 551
VM+KVMFAT
Sbjct: 406 VMVKVMFAT 432
Score = 21.7 bits (41), Expect(4) = 2e-041
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = +3 / +1
Query: 432 AASTFSVEIR 461
AASTFSVEI+
Sbjct: 310 AASTFSVEIQ 339
Score = 21.7 bits (41), Expect(2) = 4e-034
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = -2 / -1
Query: 631 EIYLTSAYT 605
+IYLTSAYT
Sbjct: 506 KIYLTSAYT 480
>gb|CL197598.1|CL197598 104_424_10943847_114_32384_054 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10943847, DNA
sequence
Length = 643
Score = 155 bits (334), Expect(6) = 2e-063
Identities = 60/60 (100%), Positives = 60/60 (100%)
Frame = +3 / +1
Query: 201 LGYNPSISMEEIRNAAVVHFNGNMKPWLDIGMNQFRHLWTKYVDYDDSYIRQCNFAPP*K 380
LGYNPSISMEEIRNAAVVHFNGNMKPWLDIGMNQFRHLWTKYVDYDDSYIRQCNFAPP*K
Sbjct: 1 LGYNPSISMEEIRNAAVVHFNGNMKPWLDIGMNQFRHLWTKYVDYDDSYIRQCNFAPP*K 180
Score = 143 bits (306), Expect(6) = 1e-059
Identities = 59/59 (100%), Positives = 59/59 (100%)
Frame = -2 / -3
Query: 379 FYGGAKLH*RIYESS*STYFVQRCLNWFIPMSSQGFMLPLKCTTAAFLISSMLMLGLYP 203
FYGGAKLH*RIYESS*STYFVQRCLNWFIPMSSQGFMLPLKCTTAAFLISSMLMLGLYP
Sbjct: 179 FYGGAKLH*RIYESS*STYFVQRCLNWFIPMSSQGFMLPLKCTTAAFLISSMLMLGLYP 3
Score = 133 bits (284), Expect(5) = 3e-050
Identities = 53/59 (89%), Positives = 54/59 (91%)
Frame = -3 / -1
Query: 378 SMAVQNCIDEYMSHHSPHTLSKGA*TGSYRCPARASCCR*NAQQQHF*SPPC*C*DCIQ 202
SM V+NCIDEYMSHHSP TLSKGA*TGSYRC ARASCC *NAQQQHF*SPPC*C DCIQ
Sbjct: 178 SMVVRNCIDEYMSHHSPRTLSKGA*TGSYRCQARASCCH*NAQQQHF*SPPC*CLDCIQ 2
Score = 131 bits (281), Expect(2) = 1e-029
Identities = 54/61 (88%), Positives = 59/61 (96%)
Frame = -1 / -2
Query: 383 NLLWRCKIALTNI*VIIVHILCPKVPELVHTDVQPGLHVAVEMHNSSISNLLHADARIVS 204
+LLW C+IALTNI*VIIVH+LCPKVPELVHTDV+PGLHVA+EMHNSSISNLLHADA IVS
Sbjct: 183 SLLWWCEIALTNI*VIIVHVLCPKVPELVHTDVKPGLHVAIEMHNSSISNLLHADAWIVS 4
Query: 203 K 201
K
Sbjct: 3 K 1
Score = 128 bits (275), Expect(4) = 6e-049
Identities = 54/60 (90%), Positives = 54/60 (90%)
Frame = +2 / +3
Query: 203 WIQS*HQHGGD*KCCCCAFQRQHEALAGHRYEPVQAPLDKVCGL**LIYSSMQFCTAIEG 382
WIQS HQHGGD*KCCCCAFQ QHEALA HRYEPVQAPLDKV GL**LIYSSMQF T IEG
Sbjct: 3 WIQSKHQHGGD*KCCCCAFQWQHEALA*HRYEPVQAPLDKVRGL**LIYSSMQFRTTIEG 182
Score = 124 bits (266), Expect(5) = 2e-044
Identities = 54/60 (90%), Positives = 54/60 (90%)
Frame = +1 / +2
Query: 202 LDTILASAWRRLEMLLLCISTAT*SPGWTSV*TSSGTFGQSMWTMMTHIFVNAILHRHRR 381
LDTI ASAWRRLEMLLLCIS AT*SPG TSV*TSSGTFGQS WTMMTHIFVNAI H HRR
Sbjct: 2 LDTIQASAWRRLEMLLLCISMAT*SPGLTSV*TSSGTFGQSTWTMMTHIFVNAISHHHRR 181
Score = 58.8 bits (122), Expect(6) = 1e-059
Identities = 21/22 (95%), Positives = 22/22 (100%)
Frame = -1 / -3
Query: 671 KYIRHFTSWIHVNRNISDFGIY 606
KYIRHFTSWIHVN+NISDFGIY
Sbjct: 521 KYIRHFTSWIHVNKNISDFGIY 456
Score = 57.9 bits (120), Expect(6) = 2e-063
Identities = 21/22 (95%), Positives = 22/22 (100%)
Frame = +1 / +1
Query: 604 LYMPKSDIFLFTWIQEVKCLMY 669
+YMPKSDIFLFTWIQEVKCLMY
Sbjct: 454 MYMPKSDIFLFTWIQEVKCLMY 519
Score = 57.0 bits (118), Expect(4) = 6e-049
Identities = 23/31 (74%), Positives = 25/31 (80%)
Frame = +2 / +2
Query: 578 CVLVMSAILCICRSQIYFCSRGSKK*SV*CI 670
CV + +CICRSQIYFC RGSKK*SV*CI
Sbjct: 428 CVCYLHNAVCICRSQIYFCLRGSKK*SV*CI 520
Score = 51.5 bits (106), Expect(5) = 3e-050
Identities = 20/23 (86%), Positives = 22/23 (95%)
Frame = -3 / -2
Query: 669 IHQTLYFLDPREQKYI*LRHIQS 601
IHQTLYFLDPR+QKYI*LRHI +
Sbjct: 519 IHQTLYFLDPRKQKYI*LRHIHT 451
Score = 48.3 bits (99), Expect(5) = 2e-044
Identities = 20/22 (90%), Positives = 21/22 (95%)
Frame = +3 / +3
Query: 606 VYAEVRYISVHVDPRSKVSDVF 671
VYAEVRYI V+VDPRSKVSDVF
Sbjct: 456 VYAEVRYIFVYVDPRSKVSDVF 521
Score = 45.1 bits (92), Expect(6) = 2e-063
Identities = 18/23 (78%), Positives = 20/23 (86%)
Frame = +1 / +3
Query: 460 GVSRVQLKGPPQSFLAHNVCH*L 528
GVS+VQLKGPPQ FL H VCH*+
Sbjct: 315 GVSQVQLKGPPQFFLDHIVCH*V 383
Score = 44.1 bits (90), Expect(4) = 6e-049
Identities = 17/24 (70%), Positives = 21/24 (87%)
Frame = +2 / +1
Query: 452 RDKEFLEYN*RDHHNLF*LIMFAI 523
R KEFL+YN*RDHHN F*+I++ I
Sbjct: 307 RFKEFLKYN*RDHHNSF*IILYVI 378
Score = 42.3 bits (86), Expect(6) = 1e-059
Identities = 18/27 (66%), Positives = 20/27 (74%)
Frame = -3 / -3
Query: 525 LMANIMS*KRLWWSLQLYSRNSLSLQK 445
LM M *K LWWSLQLY RNSL+L +
Sbjct: 380 LMTYNMI*KELWWSLQLYLRNSLNLYR 300
Score = 41.8 bits (85), Expect(5) = 3e-050
Identities = 15/19 (78%), Positives = 18/19 (94%)
Frame = -1 / -1
Query: 515 TL*ARKDCGGPFSCTLETP 459
T+*+RK+CGGPFSCT ETP
Sbjct: 370 TI*SRKNCGGPFSCT*ETP 314
Score = 36.8 bits (74), Expect(5) = 2e-044
Identities = 17/27 (62%), Positives = 19/27 (70%)
Frame = +3 / +2
Query: 444 FSVEIRSF*STTEGTTTIFSSS*CLPL 524
F + RSF STTEGTTTI S S C+ L
Sbjct: 299 FCRDSRSFSSTTEGTTTILSRSYCMSL 379
Score = 29.0 bits (57), Expect(6) = 2e-063
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +2 / +2
Query: 431 CRKHVFCRD 457
CRKHVFCRD
Sbjct: 284 CRKHVFCRD 310
Score = 28.6 bits (56), Expect(6) = 1e-059
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = -1 / -3
Query: 551 CGKHYFDHN 525
CGKHYF+HN
Sbjct: 407 CGKHYFNHN 381
Score = 28.1 bits (55), Expect(6) = 2e-063
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = +3 / +2
Query: 555 LHEHYCRCVC 584
+HEHY RCVC
Sbjct: 407 IHEHYYRCVC 436
Score = 25.4 bits (49), Expect(5) = 3e-050
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = -1 / -3
Query: 455 LYRKRACGI 429
LYRKRACGI
Sbjct: 308 LYRKRACGI 282
Score = 25.4 bits (49), Expect(6) = 1e-059
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = -3 / -2
Query: 456 SLQKTCLRH 430
SLQKTCLRH
Sbjct: 309 SLQKTCLRH 283
Score = 25.4 bits (49), Expect(6) = 1e-059
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -3 / -3
Query: 585 NTHNDNNAH 559
N HNDNNAH
Sbjct: 437 NIHNDNNAH 411
Score = 24.4 bits (47), Expect(5) = 2e-044
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = +2 / +2
Query: 518 AISYDQSNVCHMTA*ALLSLCVLVMSAILC 607
++SY SNVCH+ +C L + +C
Sbjct: 374 SLSYG*SNVCHIHEHYYRCVCYLHNAVCIC 463
Score = 22.6 bits (43), Expect(5) = 3e-050
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -2 / -2
Query: 586 *HTQRQ*CSC 557
*HTQR *CSC
Sbjct: 438 *HTQR**CSC 409
Score = 22.1 bits (42), Expect(4) = 6e-049
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +1 / +1
Query: 430 MPQARFL*R 456
MPQARFL*R
Sbjct: 283 MPQARFL*R 309
Score = 21.7 bits (41), Expect(6) = 2e-063
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = +3 / +3
Query: 525 VMIKVMFAT 551
VM+KVMFAT
Sbjct: 381 VMVKVMFAT 407
Score = 21.7 bits (41), Expect(5) = 2e-044
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = +3 / +3
Query: 432 AASTFSVEIR 461
AASTFSVEI+
Sbjct: 285 AASTFSVEIQ 314
Score = 21.7 bits (41), Expect(2) = 1e-029
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = -2 / -1
Query: 631 EIYLTSAYT 605
+IYLTSAYT
Sbjct: 481 KIYLTSAYT 455
>gb|CW082577.1|CW082577 104_424_10943847_114_32335_054 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10943847, DNA
sequence
Length = 635
Score = 154 bits (330), Expect(6) = 5e-063
Identities = 59/59 (100%), Positives = 59/59 (100%)
Frame = +3 / +3
Query: 204 GYNPSISMEEIRNAAVVHFNGNMKPWLDIGMNQFRHLWTKYVDYDDSYIRQCNFAPP*K 380
GYNPSISMEEIRNAAVVHFNGNMKPWLDIGMNQFRHLWTKYVDYDDSYIRQCNFAPP*K
Sbjct: 3 GYNPSISMEEIRNAAVVHFNGNMKPWLDIGMNQFRHLWTKYVDYDDSYIRQCNFAPP*K 179
Score = 143 bits (306), Expect(6) = 1e-059
Identities = 59/59 (100%), Positives = 59/59 (100%)
Frame = -2 / -2
Query: 379 FYGGAKLH*RIYESS*STYFVQRCLNWFIPMSSQGFMLPLKCTTAAFLISSMLMLGLYP 203
FYGGAKLH*RIYESS*STYFVQRCLNWFIPMSSQGFMLPLKCTTAAFLISSMLMLGLYP
Sbjct: 178 FYGGAKLH*RIYESS*STYFVQRCLNWFIPMSSQGFMLPLKCTTAAFLISSMLMLGLYP 2
Score = 133 bits (284), Expect(5) = 3e-050
Identities = 53/59 (89%), Positives = 54/59 (91%)
Frame = -3 / -3
Query: 378 SMAVQNCIDEYMSHHSPHTLSKGA*TGSYRCPARASCCR*NAQQQHF*SPPC*C*DCIQ 202
SM V+NCIDEYMSHHSP TLSKGA*TGSYRC ARASCC *NAQQQHF*SPPC*C DCIQ
Sbjct: 177 SMVVRNCIDEYMSHHSPRTLSKGA*TGSYRCQARASCCH*NAQQQHF*SPPC*CLDCIQ 1
Score = 129 bits (276), Expect(2) = 5e-029
Identities = 53/60 (88%), Positives = 58/60 (96%)
Frame = -1 / -1
Query: 383 NLLWRCKIALTNI*VIIVHILCPKVPELVHTDVQPGLHVAVEMHNSSISNLLHADARIVS 204
+LLW C+IALTNI*VIIVH+LCPKVPELVHTDV+PGLHVA+EMHNSSISNLLHADA IVS
Sbjct: 182 SLLWWCEIALTNI*VIIVHVLCPKVPELVHTDVKPGLHVAIEMHNSSISNLLHADAWIVS 3
Score = 128 bits (275), Expect(4) = 6e-049
Identities = 54/60 (90%), Positives = 54/60 (90%)
Frame = +2 / +2
Query: 203 WIQS*HQHGGD*KCCCCAFQRQHEALAGHRYEPVQAPLDKVCGL**LIYSSMQFCTAIEG 382
WIQS HQHGGD*KCCCCAFQ QHEALA HRYEPVQAPLDKV GL**LIYSSMQF T IEG
Sbjct: 2 WIQSKHQHGGD*KCCCCAFQWQHEALA*HRYEPVQAPLDKVRGL**LIYSSMQFRTTIEG 181
Score = 124 bits (266), Expect(5) = 2e-044
Identities = 54/60 (90%), Positives = 54/60 (90%)
Frame = +1 / +1
Query: 202 LDTILASAWRRLEMLLLCISTAT*SPGWTSV*TSSGTFGQSMWTMMTHIFVNAILHRHRR 381
LDTI ASAWRRLEMLLLCIS AT*SPG TSV*TSSGTFGQS WTMMTHIFVNAI H HRR
Sbjct: 1 LDTIQASAWRRLEMLLLCISMAT*SPGLTSV*TSSGTFGQSTWTMMTHIFVNAISHHHRR 180
Score = 58.8 bits (122), Expect(6) = 1e-059
Identities = 21/22 (95%), Positives = 22/22 (100%)
Frame = -1 / -2
Query: 671 KYIRHFTSWIHVNRNISDFGIY 606
KYIRHFTSWIHVN+NISDFGIY
Sbjct: 520 KYIRHFTSWIHVNKNISDFGIY 455
Score = 57.9 bits (120), Expect(6) = 5e-063
Identities = 21/22 (95%), Positives = 22/22 (100%)
Frame = +1 / +3
Query: 604 LYMPKSDIFLFTWIQEVKCLMY 669
+YMPKSDIFLFTWIQEVKCLMY
Sbjct: 453 MYMPKSDIFLFTWIQEVKCLMY 518
Score = 57.0 bits (118), Expect(4) = 6e-049
Identities = 23/31 (74%), Positives = 25/31 (80%)
Frame = +2 / +1
Query: 578 CVLVMSAILCICRSQIYFCSRGSKK*SV*CI 670
CV + +CICRSQIYFC RGSKK*SV*CI
Sbjct: 427 CVCYLHNAVCICRSQIYFCLRGSKK*SV*CI 519
Score = 51.5 bits (106), Expect(5) = 3e-050
Identities = 20/23 (86%), Positives = 22/23 (95%)
Frame = -3 / -1
Query: 669 IHQTLYFLDPREQKYI*LRHIQS 601
IHQTLYFLDPR+QKYI*LRHI +
Sbjct: 518 IHQTLYFLDPRKQKYI*LRHIHT 450
Score = 48.3 bits (99), Expect(5) = 2e-044
Identities = 20/22 (90%), Positives = 21/22 (95%)
Frame = +3 / +2
Query: 606 VYAEVRYISVHVDPRSKVSDVF 671
VYAEVRYI V+VDPRSKVSDVF
Sbjct: 455 VYAEVRYIFVYVDPRSKVSDVF 520
Score = 45.1 bits (92), Expect(6) = 5e-063
Identities = 18/23 (78%), Positives = 20/23 (86%)
Frame = +1 / +2
Query: 460 GVSRVQLKGPPQSFLAHNVCH*L 528
GVS+VQLKGPPQ FL H VCH*+
Sbjct: 314 GVSQVQLKGPPQFFLDHIVCH*V 382
Score = 44.1 bits (90), Expect(4) = 6e-049
Identities = 17/24 (70%), Positives = 21/24 (87%)
Frame = +2 / +3
Query: 452 RDKEFLEYN*RDHHNLF*LIMFAI 523
R KEFL+YN*RDHHN F*+I++ I
Sbjct: 306 RFKEFLKYN*RDHHNSF*IILYVI 377
Score = 42.3 bits (86), Expect(6) = 1e-059
Identities = 18/27 (66%), Positives = 20/27 (74%)
Frame = -3 / -2
Query: 525 LMANIMS*KRLWWSLQLYSRNSLSLQK 445
LM M *K LWWSLQLY RNSL+L +
Sbjct: 379 LMTYNMI*KELWWSLQLYLRNSLNLYR 299
Score = 41.8 bits (85), Expect(5) = 3e-050
Identities = 15/19 (78%), Positives = 18/19 (94%)
Frame = -1 / -3
Query: 515 TL*ARKDCGGPFSCTLETP 459
T+*+RK+CGGPFSCT ETP
Sbjct: 369 TI*SRKNCGGPFSCT*ETP 313
Score = 36.8 bits (74), Expect(5) = 2e-044
Identities = 17/27 (62%), Positives = 19/27 (70%)
Frame = +3 / +1
Query: 444 FSVEIRSF*STTEGTTTIFSSS*CLPL 524
F + RSF STTEGTTTI S S C+ L
Sbjct: 298 FCRDSRSFSSTTEGTTTILSRSYCMSL 378
Score = 29.0 bits (57), Expect(6) = 5e-063
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +2 / +1
Query: 431 CRKHVFCRD 457
CRKHVFCRD
Sbjct: 283 CRKHVFCRD 309
Score = 28.6 bits (56), Expect(6) = 1e-059
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = -1 / -2
Query: 551 CGKHYFDHN 525
CGKHYF+HN
Sbjct: 406 CGKHYFNHN 380
Score = 28.1 bits (55), Expect(6) = 5e-063
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = +3 / +1
Query: 555 LHEHYCRCVC 584
+HEHY RCVC
Sbjct: 406 IHEHYYRCVC 435
Score = 25.4 bits (49), Expect(5) = 3e-050
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = -1 / -2
Query: 455 LYRKRACGI 429
LYRKRACGI
Sbjct: 307 LYRKRACGI 281
Score = 25.4 bits (49), Expect(6) = 1e-059
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = -3 / -1
Query: 456 SLQKTCLRH 430
SLQKTCLRH
Sbjct: 308 SLQKTCLRH 282
Score = 25.4 bits (49), Expect(6) = 1e-059
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -3 / -2
Query: 585 NTHNDNNAH 559
N HNDNNAH
Sbjct: 436 NIHNDNNAH 410
Score = 24.4 bits (47), Expect(5) = 2e-044
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = +2 / +1
Query: 518 AISYDQSNVCHMTA*ALLSLCVLVMSAILC 607
++SY SNVCH+ +C L + +C
Sbjct: 373 SLSYG*SNVCHIHEHYYRCVCYLHNAVCIC 462
Score = 22.6 bits (43), Expect(5) = 3e-050
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -2 / -1
Query: 586 *HTQRQ*CSC 557
*HTQR *CSC
Sbjct: 437 *HTQR**CSC 408
Score = 22.1 bits (42), Expect(4) = 6e-049
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +1 / +3
Query: 430 MPQARFL*R 456
MPQARFL*R
Sbjct: 282 MPQARFL*R 308
Score = 21.7 bits (41), Expect(6) = 5e-063
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = +3 / +2
Query: 525 VMIKVMFAT 551
VM+KVMFAT
Sbjct: 380 VMVKVMFAT 406
Score = 21.7 bits (41), Expect(5) = 2e-044
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = +3 / +2
Query: 432 AASTFSVEIR 461
AASTFSVEI+
Sbjct: 284 AASTFSVEIQ 313
Score = 21.7 bits (41), Expect(2) = 5e-029
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = -2 / -3
Query: 631 EIYLTSAYT 605
+IYLTSAYT
Sbjct: 480 KIYLTSAYT 454
>gb|CF487333.1|CF487333 POL1_43_D11.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_43_D11_A002 3', mRNA sequence
Length = 661
Score = 234 bits (505), Expect = 1e-060
Identities = 88/137 (64%), Positives = 104/137 (75%)
Frame = +3 / +2
Query: 3 NACGWAYGMNFFDLDSWRREKCTEQYHYWQNQNENRTLWKLGTLPPGLITFYSTTKPLEK 182
NACGWAYGMN FDL W+++ T YH WQN NE+R LWKLGTLPPGL+TFY T PL+K
Sbjct: 41 NACGWAYGMNIFDLREWKKKDITGIYHKWQNLNEDRALWKLGTLPPGLLTFYKLTHPLDK 220
Query: 183 SWHVLGLGYNPSISMEEIRNAAVVHFNGNMKPWLDIGMNQFRHLWTKYVDYDDSYIRQCN 362
SWHVLGLGYNPSI EI +AAVVH+NGNMKPWL++ M ++R WTKY+ YD YIR CN
Sbjct: 221 SWHVLGLGYNPSIDRSEIDSAAVVHYNGNMKPWLELAMTKYRPYWTKYIKYDHPYIRGCN 400
Query: 363 FAPP*KVLIIDNEEESV 413
+ VL + +EEE V
Sbjct: 401 LSE*IVVLKLTDEEEPV 451
Score = 116 bits (247), Expect = 5e-025
Identities = 66/136 (48%), Positives = 71/136 (52%)
Frame = -2 / -2
Query: 412 TDSSSLSIIKTFYGGAKLH*RIYESS*STYFVQRCLNWFIPMSSQGFMLPLKCTTAAFLI 233
T SSS T KLH R+ S Y VQ I S+ GFM PL TTAA I
Sbjct: 450 TGSSSSVSFSTTIYSLKLHPRM*G*SYLIYLVQYGRYLVIASSNHGFMFPL**TTAALSI 271
Query: 232 SSMLMLGLYPSPRTCQDFSRGFVVE*KVIKPGGSVPSFHNVLFSF*FCQ*WYCSVHFSLL 53
S MLGLYP+PRTC D S G V *KV +PGGSVPSF L SF FC W V
Sbjct: 270 SERSMLGLYPNPRTCHDLSSGCVNL*KVKRPGGSVPSFQRALSSFRFCHLW*IPVISFFF 91
Query: 52 QESRSKKFIPYAHPQA 5
+SK FIP A P A
Sbjct: 90 HSLKSKMFIP*AQPHA 43
>gb|CW144377.1|CW144377 104_536_11137911_148_34962_056 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11137911, DNA
sequence
Length = 622
Score = 177 bits (380), Expect(2) = 5e-055
Identities = 68/105 (64%), Positives = 81/105 (77%)
Frame = +3 / +2
Query: 99 NENRTLWKLGTLPPGLITFYSTTKPLEKSWHVLGLGYNPSISMEEIRNAAVVHFNGNMKP 278
NE+R LWKLGTLPPGL+TFY T PL+KSWHVLGLGYNPSI EI +AAVVH+NGNMKP
Sbjct: 278 NEDRALWKLGTLPPGLLTFYKLTHPLDKSWHVLGLGYNPSIDRSEIDSAAVVHYNGNMKP 457
Query: 279 WLDIGMNQFRHLWTKYVDYDDSYIRQCNFAPP*KVLIIDNEEESV 413
WL++ M ++R WTKY+ YD YIR CN + VL + +EEE V
Sbjct: 458 WLELAMTKYRPYWTKYIKYDHPYIRGCNLSE*IVVLKLTDEEEPV 592
Score = 61.1 bits (127), Expect(2) = 5e-055
Identities = 20/31 (64%), Positives = 23/31 (74%)
Frame = +3 / +2
Query: 3 NACGWAYGMNFFDLDSWRREKCTEQYHYWQN 95
NACGWAYGMN FDL W+++ T YH WQN
Sbjct: 47 NACGWAYGMNIFDLREWKKKDITGIYHKWQN 139
>gb|BG101797.1|BG101797 RHIZ2_22_E09.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 591
Score = 197 bits (425), Expect = 1e-049
Identities = 70/111 (63%), Positives = 85/111 (76%)
Frame = +3 / +3
Query: 36 FDLDSWRREKCTEQYHYWQNQNENRTLWKLGTLPPGLITFYSTTKPLEKSWHVLGLGYNP 215
FDL+ W+ + T YH WQN NENR LWKLGTLPPGL+TFY T PL+KSWHVLGLGYNP
Sbjct: 3 FDLEEWKNKDITGIYHKWQNMNENRLLWKLGTLPPGLLTFYKLTHPLDKSWHVLGLGYNP 182
Query: 216 SISMEEIRNAAVVHFNGNMKPWLDIGMNQFRHLWTKYVDYDDSYIRQCNFA 368
+I EI NAAV+H+NGNMKPWL+I M ++R WTKY++Y+ YI C +
Sbjct: 183 TIERSEIDNAAVIHYNGNMKPWLEIAMTKYRPYWTKYINYEHPYIHGCKIS 335
Score = 109 bits (233), Expect = 4e-023
Identities = 57/108 (52%), Positives = 63/108 (58%)
Frame = -2 / -3
Query: 361 LH*RIYESS*STYFVQRCLNWFIPMSSQGFMLPLKCTTAAFLISSMLMLGLYPSPRTCQD 182
LH +Y S* YFVQ + I +SS GFMLPL TAA IS M+GLYP P TC D
Sbjct: 328 LHP*MYGCS*LMYFVQ*GRYFVIAISSHGFMLPL*WMTAALSISERSMVGLYPKPSTCHD 149
Query: 181 FSRGFVVE*KVIKPGGSVPSFHNVLFSF*FCQ*WYCSVHFSLLQESRS 38
SRG V *KV PGG+VPSF + LFSF FC W V SRS
Sbjct: 148 LSRGCVSL*KVRSPGGNVPSFQSSLFSFMFCHLW*IPVMSLFFHSSRS 5
>gb|CN127460.1|CN127460 RHOH1_23_D06.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_23_D06_A002 3', mRNA sequence
Length = 814
Score = 188 bits (406), Expect = 6e-047
Identities = 63/119 (52%), Positives = 87/119 (73%)
Frame = +3 / +1
Query: 3 NACGWAYGMNFFDLDSWRREKCTEQYHYWQNQNENRTLWKLGTLPPGLITFYSTTKPLEK 182
+ CGWA+GMN FDL +WR+E T YHYWQ QN + LW+ GTLP GL+TFY +PL++
Sbjct: 112 HTCGWAFGMNIFDLIAWRKENATSLYHYWQEQNSDLLLWRTGTLPAGLLTFYGLMEPLDR 291
Query: 183 SWHVLGLGYNPSISMEEIRNAAVVHFNGNMKPWLDIGMNQFRHLWTKYVDYDDSYIRQC 359
WHVLGLGY+ I I +AAVVH+NGNMKPWL + + +++++W +YV+ Y+R+C
Sbjct: 292 RWHVLGLGYDVDIDDRLIESAAVVHYNGNMKPWLKLAIRRYKYIWERYVNISHPYVREC 468
>gb|CX612893.1|CX612893 GABR1_5_C04.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_5_C04_A002 3', mRNA sequence
Length = 762
Score = 188 bits (406), Expect = 6e-047
Identities = 63/119 (52%), Positives = 87/119 (73%)
Frame = +3 / +1
Query: 3 NACGWAYGMNFFDLDSWRREKCTEQYHYWQNQNENRTLWKLGTLPPGLITFYSTTKPLEK 182
+ CGWA+GMN FDL +WR+E T YHYWQ QN + LW+ GTLP GL+TFY +PL++
Sbjct: 70 HTCGWAFGMNIFDLIAWRKENATSLYHYWQEQNSDLLLWRTGTLPAGLLTFYGLMEPLDR 249
Query: 183 SWHVLGLGYNPSISMEEIRNAAVVHFNGNMKPWLDIGMNQFRHLWTKYVDYDDSYIRQC 359
WHVLGLGY+ I I +AAVVH+NGNMKPWL + + +++++W +YV+ Y+R+C
Sbjct: 250 RWHVLGLGYDVDIDDRLIESAAVVHYNGNMKPWLKLAIRRYKYIWERYVNISHPYVREC 426
>gb|CD234655.1|CD234655 SS1_17_C07.b1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_17_C07_A012 3', mRNA sequence
Length = 683
Score = 181 bits (390), Expect = 1e-044
Identities = 61/115 (53%), Positives = 84/115 (73%)
Frame = +3 / +3
Query: 15 WAYGMNFFDLDSWRREKCTEQYHYWQNQNENRTLWKLGTLPPGLITFYSTTKPLEKSWHV 194
WA+GMN FDL +WR+E T YHYWQ QN + LW+ GTLP GL+TFY +PL++ WHV
Sbjct: 3 WAFGMNIFDLIAWRKENATSLYHYWQEQNSDLLLWRTGTLPAGLLTFYGLMEPLDRRWHV 182
Query: 195 LGLGYNPSISMEEIRNAAVVHFNGNMKPWLDIGMNQFRHLWTKYVDYDDSYIRQC 359
LGLGY+ I I +AAVVH+NGNMKPWL + + +++++W +YV+ Y+R+C
Sbjct: 183 LGLGYDVDIDDRLIESAAVVHYNGNMKPWLKLAIRRYKYIWERYVNISHPYVREC 347
>gb|CW306008.1|CW306008 104_791_11466607_148_36273_024 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11466607, DNA
sequence
Length = 675
Score = 141 bits (302), Expect(2) = 3e-043
Identities = 51/78 (65%), Positives = 62/78 (79%)
Frame = +3 / -1
Query: 132 LPPGLITFYSTTKPLEKSWHVLGLGYNPSISMEEIRNAAVVHFNGNMKPWLDIGMNQFRH 311
LP GL+TFY TKPL+KSWHV+GLGYNP I E+I AAV+HFNGNMKPWLD+ NQ++H
Sbjct: 252 LPVGLMTFYGKTKPLDKSWHVMGLGYNPHIRPEDIGGAAVIHFNGNMKPWLDVAFNQYKH 73
Query: 312 LWTKYVDYDDSYIRQCNF 365
LWTKYVD + ++ NF
Sbjct: 72 LWTKYVDTEMEFLTISNF 19
Score = 57.4 bits (119), Expect(2) = 3e-043
Identities = 17/26 (65%), Positives = 22/26 (84%)
Frame = +3 / -3
Query: 6 ACGWAYGMNFFDLDSWRREKCTEQYH 83
AC W+YG+N FDL WRRE+CT+Q+H
Sbjct: 490 ACAWSYGVNVFDLQGWRREQCTQQFH 413
>gb|BM331533.1|BM331533 PIC1_72_D10.g1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 596
Score = 173 bits (373), Expect = 2e-042
Identities = 59/94 (62%), Positives = 80/94 (85%)
Frame = +3 / +2
Query: 78 YHYWQNQNENRTLWKLGTLPPGLITFYSTTKPLEKSWHVLGLGYNPSISMEEIRNAAVVH 257
YHYWQ+ NE+R LWKLGTLPPGLITFY+ T PL ++WHVLGLGY+P++ + EI NAAVVH
Sbjct: 5 YHYWQDLNEDRKLWKLGTLPPGLITFYNLTYPLNRTWHVLGLGYDPAVDIAEIDNAAVVH 184
Query: 258 FNGNMKPWLDIGMNQFRHLWTKYVDYDDSYIRQC 359
+NGN KPWLD+ +++++ W+KYVD D+S+++ C
Sbjct: 185 YNGNYKPWLDLAISKYKTYWSKYVDVDNSHVQHC 286
>gb|BM329584.1|BM329584 PIC1_40_E09.g1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 628
Score = 170 bits (366), Expect = 2e-041
Identities = 59/94 (62%), Positives = 78/94 (82%)
Frame = +3 / +3
Query: 90 QNQNENRTLWKLGTLPPGLITFYSTTKPLEKSWHVLGLGYNPSISMEEIRNAAVVHFNGN 269
Q NE+R+LWKLGTLPPGLITF++ T PL +SWHVLGLGYNP ++ +I AAV+H+NGN
Sbjct: 3 QKLNEDRSLWKLGTLPPGLITFWNKTFPLSRSWHVLGLGYNPHVNSRDIERAAVIHYNGN 182
Query: 270 MKPWLDIGMNQFRHLWTKYVDYDDSYIRQCNFAP 371
MKPWL+IG+ ++R W+KY+DYD S++R+CN P
Sbjct: 183 MKPWLEIGLPKYRSYWSKYLDYDQSFLRECNINP 284
>gb|CW285991.1|CW285991 104_763_11410641_116_35511_039 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11410641, DNA
sequence
Length = 612
Score = 167 bits (360), Expect = 1e-040
Identities = 60/90 (66%), Positives = 72/90 (80%)
Frame = +3 / +2
Query: 99 NENRTLWKLGTLPPGLITFYSTTKPLEKSWHVLGLGYNPSISMEEIRNAAVVHFNGNMKP 278
NENR LWKLGTLPPGL+TFY T PL+KSWHVLGLGYNP+I EI NAAV+H+NGNMKP
Sbjct: 62 NENRLLWKLGTLPPGLLTFYKLTHPLDKSWHVLGLGYNPTIERSEIDNAAVIHYNGNMKP 241
Query: 279 WLDIGMNQFRHLWTKYVDYDDSYIRQCNFA 368
WL+I M ++R WTKY++Y+ YI C +
Sbjct: 242 WLEIAMTKYRPYWTKYINYEHPYIHGCKIS 331
>gb|BI139893.1|BI139893 IP1_47_A12.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 598
Score = 123 bits (264), Expect(2) = 6e-038
Identities = 43/95 (45%), Positives = 57/95 (60%)
Frame = +3 / +2
Query: 90 QNQNENRTLWKLGTLPPGLITFYSTTKPLEKSWHVLGLGYNPSISMEEIRNAAVVHFNGN 269
+N TLWK GTLPP LI F ++ SWH+LGLGY +E +R AAV+H+NG
Sbjct: 284 ENLKSGLTLWKFGTLPPALIAFRGHVHGIDPSWHLLGLGYQDKTDIESVRRAAVIHYNGQ 463
Query: 270 MKPWLDIGMNQFRHLWTKYVDYDDSYIRQCNFAPP 374
KPWLDI + WTK+V+Y ++R C+ P
Sbjct: 464 CKPWLDIAFKNLQPFWTKHVNYSXDFVRNCHILEP 568
Score = 55.1 bits (114), Expect(2) = 6e-038
Identities = 16/31 (51%), Positives = 21/31 (67%)
Frame = +3 / +2
Query: 9 CGWAYGMNFFDLDSWRREKCTEQYHYWQNQN 101
C WAYGMN FDL +WR+ + YH+W +N
Sbjct: 197 CAWAYGMNIFDLAAWRKTNIRDTYHFWLKEN 289
>gb|CL158360.1|CL158360 104_347_10803488_114_31377_080 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10803488, DNA
sequence
Length = 727
Score = 142 bits (305), Expect = 5e-033
Identities = 51/78 (65%), Positives = 65/78 (83%)
Frame = +3 / +2
Query: 132 LPPGLITFYSTTKPLEKSWHVLGLGYNPSISMEEIRNAAVVHFNGNMKPWLDIGMNQFRH 311
L GL++FY TKPL+KSWHV+GLGYNPSIS E IR+AAV+HF+GNMKPWLD+ +NQ++
Sbjct: 470 LTAGLMSFYGNTKPLDKSWHVMGLGYNPSISPEAIRSAAVIHFDGNMKPWLDVALNQYKA 649
Query: 312 LWTKYVDYDDSYIRQCNF 365
LWTKYVD + ++ CNF
Sbjct: 650 LWTKYVDTEMEFLTLCNF 703
>gb|CL158361.1|CL158361 104_347_10803488_116_31378_080 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10803488, DNA
sequence
Length = 731
Score = 142 bits (305), Expect = 5e-033
Identities = 51/78 (65%), Positives = 65/78 (83%)
Frame = +3 / -3
Query: 132 LPPGLITFYSTTKPLEKSWHVLGLGYNPSISMEEIRNAAVVHFNGNMKPWLDIGMNQFRH 311
L GL++FY TKPL+KSWHV+GLGYNPSIS E IR+AAV+HF+GNMKPWLD+ +NQ++
Sbjct: 366 LTAGLMSFYGNTKPLDKSWHVMGLGYNPSISPEAIRSAAVIHFDGNMKPWLDVALNQYKA 187
Query: 312 LWTKYVDYDDSYIRQCNF 365
LWTKYVD + ++ CNF
Sbjct: 186 LWTKYVDTEMEFLTLCNF 133
>gb|CW285992.1|CW285992 104_763_11410641_148_35507_039 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11410641, DNA
sequence
Length = 694
Score = 127 bits (271), Expect = 3e-028
Identities = 44/73 (60%), Positives = 56/73 (76%)
Frame = +3 / -1
Query: 150 TFYSTTKPLEKSWHVLGLGYNPSISMEEIRNAAVVHFNGNMKPWLDIGMNQFRHLWTKYV 329
TFY T PL+KSWHVLGLGYNP++ EI NAAV+H+NGNMKPWL+I M ++R WTKY+
Sbjct: 694 TFYKLTHPLDKSWHVLGLGYNPTMXRSEIDNAAVIHYNGNMKPWLEIAMTKYRPYWTKYI 515
Query: 330 DYDDSYIRQCNFA 368
+Y+ YI C +
Sbjct: 514 NYEHPYIHGCKIS 476
>gb|CW381875.1|CW381875 fsbb001f063h19k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f063h19, DNA
sequence
Length = 722
Score = 120 bits (257), Expect = 2e-026
Identities = 40/89 (44%), Positives = 66/89 (74%)
Frame = +3 / +2
Query: 96 QNENRTLWKLGTLPPGLITFYSTTKPLEKSWHVLGLGYNPSISMEEIRNAAVVHFNGNMK 275
Q + + LWK G+LP G +TFY+ T PL+ WHV GLG++ SI E+ +A+V+H++G +K
Sbjct: 59 QGKIQKLWKPGSLPLGQLTFYNRTLPLDHRWHVFGLGHDFSIGRNELESASVIHYSGKLK 238
Query: 276 PWLDIGMNQFRHLWTKYVDYDDSYIRQCN 362
PWL+I + ++R W +Y++YD+ +++QCN
Sbjct: 239 PWLEISIPKYRDYWNRYLNYDNPHLQQCN 325
>gb|CF480371.1|CF480371 POL1_65_H05.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_65_H05_A002 3', mRNA sequence
Length = 430
Score = 113 bits (242), Expect = 3e-024
Identities = 39/64 (60%), Positives = 50/64 (78%)
Frame = +3 / +2
Query: 177 EKSWHVLGLGYNPSISMEEIRNAAVVHFNGNMKPWLDIGMNQFRHLWTKYVDYDDSYIRQ 356
+KSWHVLGLGYNP+I EI NAAV+H+NGNMKPWL+I M ++R WTKY++Y+ YI
Sbjct: 2 DKSWHVLGLGYNPTIERSEIDNAAVIHYNGNMKPWLEIAMTKYRPYWTKYINYEPPYIHG 181
Query: 357 CNFA 368
C +
Sbjct: 182 CKIS 193
>gb|CF769345.1|CF769345 DSBF1_1_C05.b1_A010 Drought-stressed before flowering Sorghum
bicolor cDNA clone DSBF1_1_C05_A010 5', mRNA sequence
Length = 580
Score = 107 bits (228), Expect = 2e-022
Identities = 36/79 (45%), Positives = 49/79 (62%)
Frame = +3 / +1
Query: 138 PGLITFYSTTKPLEKSWHVLGLGYNPSISMEEIRNAAVVHFNGNMKPWLDIGMNQFRHLW 317
PGLI F P++ SWH+LGLGY + + AAV+H+NG KPWL+IG + W
Sbjct: 1 PGLIAFKGHVHPIDPSWHLLGLGYQEKTDISSVEQAAVIHYNGQSKPWLEIGFKHLQPFW 180
Query: 318 TKYVDYDDSYIRQCNFAPP 374
TKYV+Y + +IR C+ P
Sbjct: 181 TKYVNYSNEFIRNCHIMEP 237
>gb|CW451706.1|CW451706 fsbb001f191o09k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f191o09, DNA
sequence
Length = 599
Score = 55.1 bits (114), Expect(3) = 8e-022
Identities = 16/45 (35%), Positives = 32/45 (71%)
Frame = +3 / -3
Query: 234 IRNAAVVHFNGNMKPWLDIGMNQFRHLWTKYVDYDDSYIRQCNFA 368
+R++AV+HF+G KPWL++ + R LW +++ DS+++ C ++
Sbjct: 183 VRSSAVLHFSGPRKPWLEVAFPELRQLWLAHLNASDSFLQGCGWS 49
Score = 49.2 bits (101), Expect(3) = 8e-022
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = +3 / -2
Query: 9 CGWAYGMNFFDLDSWRREKCTEQYHYW 89
C W++G+N DLD+WRR TE Y +W
Sbjct: 556 CAWSWGVNIVDLDAWRRTNVTETYQFW 476
Score = 40.5 bits (82), Expect(3) = 8e-022
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +3 / -3
Query: 90 QNQNENRTLWKLGTLPPGLITFYSTTKPLEKSWHVLGLGY 209
QN+ LW++ +LPP LI + +E W++ GLG+
Sbjct: 324 QNRESGFRLWQMASLPPALIAVDGRVQAIEPQWNLPGLGW 205
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 932,968,605
Number of Sequences: 832831
Number of extensions: 13703257
Number of successful extensions: 79004
Number of sequences better than 1.0e-020: 31
length of database: 163,786,556
effective HSP length: 54
effective length of database: 118,813,682
effective search space used: 23049854308
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)