TBLASTX 2.2.10 [Oct-19-2004]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 2192890.2.1
         (531 letters)

Database: Sorghum_nucl_with_EST.fasta 
           832,831 sequences; 491,359,669 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|CF757512.1|CF757512  DSAF1_18_H07.g1_A011 Drought-stresse...   127   1e-030
gb|CF755788.1|CF755788  DSAF1_1_H02.b1_A011 Drought-stressed...   127   1e-030
gb|CF755867.1|CF755867  DSAF1_1_H02.g1_A011 Drought-stressed...   127   5e-029

>gb|CF757512.1|CF757512 DSAF1_18_H07.g1_A011 Drought-stressed after flowering Sorghum
           bicolor cDNA clone DSAF1_18_H07_A011 3', mRNA sequence
          Length = 473

 Score =  127 bits (272), Expect(2) = 1e-030
 Identities = 54/56 (96%), Positives = 55/56 (98%)
 Frame = +1 / +3

                                                                   
Query: 67  PEMAASSAVEKLKVLWDSQVNDEEQWALNYKLLKAAGLFAGSIFLMRNFGDLMAI* 234
           PEMAASS+VEKLK LWDSQVNDEEQWALNYKLLKAAGLFAGSIFLMRNFGDLMAI*
Sbjct: 30  PEMAASSSVEKLKALWDSQVNDEEQWALNYKLLKAAGLFAGSIFLMRNFGDLMAI* 197




 Score = 27.2 bits (53), Expect(2) = 1e-030
 Identities = 9/10 (90%), Positives = 9/10 (90%)
 Frame = +1 / +1

                     
Query: 415 IFWNDGISLH 444
           IFWNDGI LH
Sbjct: 433 IFWNDGIYLH 462



>gb|CF755788.1|CF755788 DSAF1_1_H02.b1_A011 Drought-stressed after flowering Sorghum
           bicolor cDNA clone DSAF1_1_H02_A011 5', mRNA sequence
          Length = 487

 Score =  127 bits (272), Expect(2) = 1e-030
 Identities = 54/56 (96%), Positives = 55/56 (98%)
 Frame = +1 / +3

                                                                   
Query: 67  PEMAASSAVEKLKVLWDSQVNDEEQWALNYKLLKAAGLFAGSIFLMRNFGDLMAI* 234
           PEMAASS+VEKLK LWDSQVNDEEQWALNYKLLKAAGLFAGSIFLMRNFGDLMAI*
Sbjct: 30  PEMAASSSVEKLKALWDSQVNDEEQWALNYKLLKAAGLFAGSIFLMRNFGDLMAI* 197




 Score = 27.2 bits (53), Expect(2) = 1e-030
 Identities = 9/10 (90%), Positives = 9/10 (90%)
 Frame = +1 / +1

                     
Query: 415 IFWNDGISLH 444
           IFWNDGI LH
Sbjct: 433 IFWNDGIYLH 462



>gb|CF755867.1|CF755867 DSAF1_1_H02.g1_A011 Drought-stressed after flowering Sorghum
           bicolor cDNA clone DSAF1_1_H02_A011 3', mRNA sequence
          Length = 470

 Score =  127 bits (272), Expect(2) = 5e-029
 Identities = 54/56 (96%), Positives = 55/56 (98%)
 Frame = +1 / +3

                                                                   
Query: 67  PEMAASSAVEKLKVLWDSQVNDEEQWALNYKLLKAAGLFAGSIFLMRNFGDLMAI* 234
           PEMAASS+VEKLK LWDSQVNDEEQWALNYKLLKAAGLFAGSIFLMRNFGDLMAI*
Sbjct: 30  PEMAASSSVEKLKALWDSQVNDEEQWALNYKLLKAAGLFAGSIFLMRNFGDLMAI* 197




 Score = 21.7 bits (41), Expect(2) = 5e-029
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = +1 / +3

                   
Query: 418 FWNDGISL 441
           FWNDGI L
Sbjct: 435 FWNDGIYL 458



  Database: Sorghum_nucl_with_EST.fasta
    Posted date:  Feb 7, 2006  2:54 PM
  Number of letters in database: 491,359,669
  Number of sequences in database:  832,831
  
Lambda     K      H
   0.318    0.134    0.401 


Matrix: BLOSUM62
Number of Hits to DB: 517,246,589
Number of Sequences: 832831
Number of extensions: 5770258
Number of successful extensions: 85458
Number of sequences better than 1.0e-020: 4
length of database: 163,786,556
effective HSP length: 53
effective length of database: 119,646,513
effective search space used: 14716521099
frameshift window, decay const: 40,  0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)