TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2161285.2.2
(798 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BE358411.1|BE358411 DG1_29_C02.g1_A002 Dark Grown 1 (DG1... 321 9e-087
gb|BF656911.1|BF656911 OV2_22_E11.g1_A002 Ovary 2 (OV2) Sor... 321 9e-087
gb|BG323188.1|BG323188 EM1_15_H09.g1_A002 Embryo 1 (EM1) So... 321 9e-087
gb|CD424232.1|CD424232 SA1_4_H05.b1_A002 Salicylic acid-tre... 321 9e-087
gb|CD424847.1|CD424847 SA1_9_H04.b1_A002 Salicylic acid-tre... 321 9e-087
gb|BG487902.1|BG487902 RHIZ2_60_G05.g1_A003 Rhizome2 (RHIZ2... 291 1e-077
gb|CF072326.1|CF072326 FE1_2_H07.b1_A002 Iron-deficient see... 280 2e-074
gb|BM327869.1|BM327869 PIC1_18_E04.g1_A002 Pathogen-infecte... 276 3e-073
gb|BG357415.1|BG357415 OV2_29_F03.g1_A002 Ovary 2 (OV2) Sor... 272 5e-072
gb|BM331190.1|BM331190 PIC1_70_G09.g1_A002 Pathogen-infecte... 257 1e-071
gb|CF072848.1|CF072848 FE1_26_E01.b1_A002 Iron-deficient se... 258 1e-067
gb|BG558740.1|BG558740 RHIZ2_59_H07.g1_A003 Rhizome2 (RHIZ2... 240 2e-062
gb|BI098064.1|BI098064 IP1_31_E11.g1_A002 Immature pannicle... 234 1e-060
gb|DN552508.1|DN552508 pSHR-RT-A-H1_H01_C100 pSHR Sorghum h... 231 1e-059
gb|BQ656040.1|BQ656040 pRC0338 Sorghum halepense rhizome cD... 220 2e-056
gb|BG556485.1|BG556485 EM1_37_G04.g1_A002 Embryo 1 (EM1) So... 219 4e-056
gb|CW391258.1|CW391258 fsbb001f077f01f0 Sorghum methylation... 107 2e-055
gb|CW203727.1|CW203727 104_631_11186168_148_36906_024 Sorgh... 107 3e-054
gb|BF586222.1|BF586222 FM1_27_C04.b1_A003 Floral-Induced Me... 195 8e-049
gb|CF431297.1|CF431297 NIT1_5_G04.b1_A002 Nitrogen-deficien... 191 1e-047
gb|BG273345.1|BG273345 OV2_27_C04.g1_A002 Ovary 2 (OV2) Sor... 185 6e-046
gb|CN133913.1|CN133913 OX1_19_D01.b1_A002 Oxidatively-stres... 110 4e-045
gb|AW678004.1|AW678004 WS1_12_G12.g1_A002 Water-stressed 1 ... 182 7e-045
gb|CW316446.1|CW316446 104_807_11472898_148_35847_033 Sorgh... 127 7e-045
gb|CX622684.1|CX622684 GABR1_65_H12.b1_A002 GA- or brassino... 97 4e-042
gb|AC169378.1| Sorghum bicolor clone SB_BBc0007L02, WORKING... 103 2e-040
gb|CD463051.1|CD463051 ETH1_42_E06.b1_A002 Ethylene-treated... 161 3e-040
gb|CW375131.1|CW375131 fsbb001f052f19k0 Sorghum methylation... 107 2e-039
gb|BI075496.1|BI075496 IP1_21_C05.g1_A002 Immature pannicle... 154 2e-036
gb|CW360333.1|CW360333 fsbb001f028g01k0 Sorghum methylation... 103 1e-035
gb|CW128898.1|CW128898 104_510_11114268_116_34757_036 Sorgh... 84 1e-029
gb|CW392111.1|CW392111 fsbb001f078j07k0 Sorghum methylation... 73 2e-028
gb|CD232395.1|CD232395 SS1_45_A09.b1_A012 Salt-stressed see... 120 6e-027
gb|BG556693.1|BG556693 EM1_40_D05.g1_A002 Embryo 1 (EM1) So... 119 5e-026
gb|CW199474.1|CW199474 104_624_11183529_148_36850_037 Sorgh... 103 8e-025
gb|CW048319.1|CW048319 104_286_10513293_114_30214 Sorghum m... 98 2e-024
gb|CW040084.1|CW040084 104_273_10505880_114_30266 Sorghum m... 73 4e-023
gb|CD234501.1|CD234501 SS1_27_C11.g1_A012 Salt-stressed see... 107 2e-022
gb|CW275167.1|CW275167 104_748_11404818_148_35383_073 Sorgh... 68 3e-022
gb|CW375130.1|CW375130 fsbb001f052f19f0 Sorghum methylation... 93 8e-022
gb|CW342782.1|CW342782 104_844_11487063_148_36178_052 Sorgh... 93 8e-022
gb|CW203726.1|CW203726 104_631_11186168_116_37062_024 Sorgh... 93 8e-022
gb|CW391259.1|CW391259 fsbb001f077f01k0 Sorghum methylation... 93 8e-022
gb|CF072232.1|CF072232 FE1_6_H10.b1_A002 Iron-deficient see... 105 9e-022
gb|BG933148.1|BG933148 WS1_29_G10.b1_A002 Water-stressed 1 ... 104 2e-021
gb|BI075633.1|BI075633 IP1_23_B05.g1_A002 Immature pannicle... 102 6e-021
>gb|BE358411.1|BE358411 DG1_29_C02.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 646
Score = 321 bits (695), Expect = 9e-087
Identities = 131/166 (78%), Positives = 144/166 (86%)
Frame = +1 / +1
Query: 1 PLFVTDNDQTWNPDAIVFNSWQHYGTPSYWMQTXFRRVNRAIVHPVNIXXXXXXXXXXXX 180
PLFV +NDQTWNPDAIVFNSWQHYGTPSYWMQT FR + A++HP+N+
Sbjct: 76 PLFVNNNDQTWNPDAIVFNSWQHYGTPSYWMQTLFRESSGAMIHPINMSSRYSSSLAASA 255
Query: 181 ITWQDAENSFLRVKVVNFGSDTVNLTVSTSGLGASVNALGSTATVLTSGNVMDENSFSNP 360
ITWQD+ENSFLRVKVVNFGSDTV+LT+STSGL ASVN+LGSTATVLTSGNVMDENSFSNP
Sbjct: 256 ITWQDSENSFLRVKVVNFGSDTVSLTISTSGLQASVNSLGSTATVLTSGNVMDENSFSNP 435
Query: 361 NKVAPVKSQLSNAAEQMQVTLAPHSFTAFDLALAEPKLVAEI*CVC 498
NKVAPVKSQLSNA EQMQVTLAPHSFT FDLALA+ KLVAE+* +C
Sbjct: 436 NKVAPVKSQLSNAGEQMQVTLAPHSFTTFDLALAQSKLVAEM*SMC 573
Score = 308 bits (667), Expect = 7e-083
Identities = 142/165 (86%), Positives = 143/165 (86%)
Frame = -2 / -3
Query: 497 HTHHISATSLGSASARSKAVKE*GASVTCICSAALLSWLFTGATLFGLLKEFSSMTLPDV 318
H HISATSL ASARS VKE*GASVTCICS ALLSWLFTGATLFGLLKEFSS+TLPDV
Sbjct: 572 HIDHISATSLD*ASARSNVVKE*GASVTCICSPALLSWLFTGATLFGLLKEFSSITLPDV 393
Query: 317 RTVAVDPSALTLAPSPLVETVRLTVSDPKFTTFTLRKLFSASCHVIADAASELEYRELIL 138
RTVAVDPS LTLA SPLVE VRLTVSDPKFTTFTLRKLFS SCHVIADAASELEYRELIL
Sbjct: 392 RTVAVDPSELTLA*SPLVEIVRLTVSDPKFTTFTLRKLFSESCHVIADAASELEYRELIL 213
Query: 137 TG*TMARLTLRKXVCIQ*LGVP*CCQELKTIASGFHVWSLSVTKS 3
G MA L RK VCIQ*LGVP*CCQELKTIASGFHV SL T S
Sbjct: 212 IGWIMAPLDSRKSVCIQ*LGVP*CCQELKTIASGFHV*SLLFTNS 78
Score = 249 bits (539), Expect = 3e-065
Identities = 116/167 (69%), Positives = 123/167 (73%)
Frame = +2 / +2
Query: 2 HSS*PTMTKRGTRTLLSSTPGNTMXLLATGCRXFSXESTAPLFIRLISVPGTRVRWPRLR 181
H S* TM KRGTR LLSSTPGN LL TGCR FS P I+LI VPGT+ R L+
Sbjct: 77 HYS*ITMIKRGTRMLLSSTPGNITELLVTGCRHFSVSPVVP*SIQLI*VPGTQAR*LHLQ 256
Query: 182 SRGRMQRIAS*E*RS*TSGRTPLTSRSPRADSGPASTRWDQPPPSSRLATSWTRTPSVTR 361
RGR QRIAS E*R *T GRT L SRSP+ D P STRWDQPP S LAT W RT SVT+
Sbjct: 257 LRGRTQRIASLE*RL*TLGRTLLASRSPQVDFRPVSTRWDQPPLFSHLATLWMRTLSVTQ 436
Query: 362 TRLRR*KAS*ATPRSRCRSRWLLTPSPPSIWRWLSPSLWRRYDVCAA 502
TRLRR*KAS*AT SRCRSRWLLTPSP SIWRWLSPSLW+R D C +
Sbjct: 437 TRLRR*KAS*ATLGSRCRSRWLLTPSPRSIWRWLSPSLWQRCDQCVS 577
Score = 249 bits (539), Expect = 3e-065
Identities = 112/165 (67%), Positives = 130/165 (78%)
Frame = -1 / -2
Query: 495 HTSYLRHKLGLSQRQIEGGEGVRSQRDLHLLRGVAQLAFHRRNLVRVTEGVLVHDVARRE 316
H S+L HKLGLSQRQIE GEGVRSQRDLHLL VAQLAFHRRNLV VTE VL+H+VAR E
Sbjct: 570 H*SHLCHKLGLSQRQIERGEGVRSQRDLHLLPSVAQLAFHRRNLVWVTERVLIHNVARCE 391
Query: 315 DGGG*SQRVDAGPESARGDREVNGVRPEVHDLHSQEAILCILPRDRRRGQRTRVPGTDIN 136
+ GG*SQRVD G +S GDRE N VRP+V++L+S+EAIL +LPR+ R R VPGT IN
Sbjct: 390 NSGG*SQRVDTGLKSTCGDREANSVRPKVYNLYSKEAIL*VLPRNCRCS*RA*VPGTHIN 211
Query: 135 RMNNGAVDSXEXXLHPVARSXIVLPGVEDNSVRVPRLVIVGHEEW 1
M++G E LHPV RS ++LPGVEDNS+RVPRL+IV HE W
Sbjct: 210 WMDHGTTGLTEKCLHPVTRSSVMLPGVEDNSIRVPRLIIVIHE*W 76
Score = 228 bits (492), Expect = 9e-059
Identities = 103/166 (62%), Positives = 119/166 (71%)
Frame = +3 / +3
Query: 3 TLRDRQ*PNVEPGRYCXXXXXXXXXXXXXDADXFPXSQPRHCSSG*YQFPVLEFAGRVCD 182
T+R+ Q* NVEPG YC DAD FP Q H S *Y+FPVL+ A +C+
Sbjct: 78 TIRE*Q*SNVEPGCYCLQLLATLRNS*LLDADTFP*VQWCHDPSN*YEFPVLKLASCICN 257
Query: 183 HVAGCRE*LPESEGRELRVGHR*PHGLHERTRGQRQRAGINRHRPHVWQRHGRELLQ*PE 362
+VAG RE*LP S+G +L VGH *PH LH+ T GQ Q AGINRH H+WQR+G EL Q*P+
Sbjct: 258 YVAGLRE*LP*SKGCKLWVGHC*PHDLHKWTSGQCQLAGINRHCSHIWQRYG*ELFQ*PK 437
Query: 363 QGCAGEKPAEQRRGADAGHAGSSLLHRLRSGAG*AQACGGDMMCVL 500
QGCAGEKPAEQR GADAGHAGSSLLH +RSGAG QACG D++ VL
Sbjct: 438 QGCAGEKPAEQRWGADAGHAGSSLLHHVRSGAGSVQACGRDVINVL 575
>gb|BF656911.1|BF656911 OV2_22_E11.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 619
Score = 321 bits (695), Expect = 9e-087
Identities = 131/166 (78%), Positives = 144/166 (86%)
Frame = +1 / +2
Query: 1 PLFVTDNDQTWNPDAIVFNSWQHYGTPSYWMQTXFRRVNRAIVHPVNIXXXXXXXXXXXX 180
PLFV +NDQTWNPDAIVFNSWQHYGTPSYWMQT FR + A++HP+N+
Sbjct: 74 PLFVNNNDQTWNPDAIVFNSWQHYGTPSYWMQTLFRESSGAMIHPINMSSRYSSSLAASA 253
Query: 181 ITWQDAENSFLRVKVVNFGSDTVNLTVSTSGLGASVNALGSTATVLTSGNVMDENSFSNP 360
ITWQD+ENSFLRVKVVNFGSDTV+LT+STSGL ASVN+LGSTATVLTSGNVMDENSFSNP
Sbjct: 254 ITWQDSENSFLRVKVVNFGSDTVSLTISTSGLQASVNSLGSTATVLTSGNVMDENSFSNP 433
Query: 361 NKVAPVKSQLSNAAEQMQVTLAPHSFTAFDLALAEPKLVAEI*CVC 498
NKVAPVKSQLSNA EQMQVTLAPHSFT FDLALA+ KLVAE+* +C
Sbjct: 434 NKVAPVKSQLSNAGEQMQVTLAPHSFTTFDLALAQSKLVAEM*SMC 571
Score = 308 bits (667), Expect = 7e-083
Identities = 142/165 (86%), Positives = 143/165 (86%)
Frame = -2 / -2
Query: 497 HTHHISATSLGSASARSKAVKE*GASVTCICSAALLSWLFTGATLFGLLKEFSSMTLPDV 318
H HISATSL ASARS VKE*GASVTCICS ALLSWLFTGATLFGLLKEFSS+TLPDV
Sbjct: 570 HIDHISATSLD*ASARSNVVKE*GASVTCICSPALLSWLFTGATLFGLLKEFSSITLPDV 391
Query: 317 RTVAVDPSALTLAPSPLVETVRLTVSDPKFTTFTLRKLFSASCHVIADAASELEYRELIL 138
RTVAVDPS LTLA SPLVE VRLTVSDPKFTTFTLRKLFS SCHVIADAASELEYRELIL
Sbjct: 390 RTVAVDPSELTLA*SPLVEIVRLTVSDPKFTTFTLRKLFSESCHVIADAASELEYRELIL 211
Query: 137 TG*TMARLTLRKXVCIQ*LGVP*CCQELKTIASGFHVWSLSVTKS 3
G MA L RK VCIQ*LGVP*CCQELKTIASGFHV SL T S
Sbjct: 210 IGWIMAPLDSRKSVCIQ*LGVP*CCQELKTIASGFHV*SLLFTNS 76
Score = 249 bits (539), Expect = 3e-065
Identities = 116/167 (69%), Positives = 123/167 (73%)
Frame = +2 / +3
Query: 2 HSS*PTMTKRGTRTLLSSTPGNTMXLLATGCRXFSXESTAPLFIRLISVPGTRVRWPRLR 181
H S* TM KRGTR LLSSTPGN LL TGCR FS P I+LI VPGT+ R L+
Sbjct: 75 HYS*ITMIKRGTRMLLSSTPGNITELLVTGCRHFSVSPVVP*SIQLI*VPGTQAR*LHLQ 254
Query: 182 SRGRMQRIAS*E*RS*TSGRTPLTSRSPRADSGPASTRWDQPPPSSRLATSWTRTPSVTR 361
RGR QRIAS E*R *T GRT L SRSP+ D P STRWDQPP S LAT W RT SVT+
Sbjct: 255 LRGRTQRIASLE*RL*TLGRTLLASRSPQVDFRPVSTRWDQPPLFSHLATLWMRTLSVTQ 434
Query: 362 TRLRR*KAS*ATPRSRCRSRWLLTPSPPSIWRWLSPSLWRRYDVCAA 502
TRLRR*KAS*AT SRCRSRWLLTPSP SIWRWLSPSLW+R D C +
Sbjct: 435 TRLRR*KAS*ATLGSRCRSRWLLTPSPRSIWRWLSPSLWQRCDQCVS 575
Score = 249 bits (539), Expect = 3e-065
Identities = 112/165 (67%), Positives = 130/165 (78%)
Frame = -1 / -1
Query: 495 HTSYLRHKLGLSQRQIEGGEGVRSQRDLHLLRGVAQLAFHRRNLVRVTEGVLVHDVARRE 316
H S+L HKLGLSQRQIE GEGVRSQRDLHLL VAQLAFHRRNLV VTE VL+H+VAR E
Sbjct: 568 H*SHLCHKLGLSQRQIERGEGVRSQRDLHLLPSVAQLAFHRRNLVWVTERVLIHNVARCE 389
Query: 315 DGGG*SQRVDAGPESARGDREVNGVRPEVHDLHSQEAILCILPRDRRRGQRTRVPGTDIN 136
+ GG*SQRVD G +S GDRE N VRP+V++L+S+EAIL +LPR+ R R VPGT IN
Sbjct: 388 NSGG*SQRVDTGLKSTCGDREANSVRPKVYNLYSKEAIL*VLPRNCRCS*RA*VPGTHIN 209
Query: 135 RMNNGAVDSXEXXLHPVARSXIVLPGVEDNSVRVPRLVIVGHEEW 1
M++G E LHPV RS ++LPGVEDNS+RVPRL+IV HE W
Sbjct: 208 WMDHGTTGLTEKCLHPVTRSSVMLPGVEDNSIRVPRLIIVIHE*W 74
Score = 228 bits (492), Expect = 9e-059
Identities = 103/166 (62%), Positives = 119/166 (71%)
Frame = +3 / +1
Query: 3 TLRDRQ*PNVEPGRYCXXXXXXXXXXXXXDADXFPXSQPRHCSSG*YQFPVLEFAGRVCD 182
T+R+ Q* NVEPG YC DAD FP Q H S *Y+FPVL+ A +C+
Sbjct: 76 TIRE*Q*SNVEPGCYCLQLLATLRNS*LLDADTFP*VQWCHDPSN*YEFPVLKLASCICN 255
Query: 183 HVAGCRE*LPESEGRELRVGHR*PHGLHERTRGQRQRAGINRHRPHVWQRHGRELLQ*PE 362
+VAG RE*LP S+G +L VGH *PH LH+ T GQ Q AGINRH H+WQR+G EL Q*P+
Sbjct: 256 YVAGLRE*LP*SKGCKLWVGHC*PHDLHKWTSGQCQLAGINRHCSHIWQRYG*ELFQ*PK 435
Query: 363 QGCAGEKPAEQRRGADAGHAGSSLLHRLRSGAG*AQACGGDMMCVL 500
QGCAGEKPAEQR GADAGHAGSSLLH +RSGAG QACG D++ VL
Sbjct: 436 QGCAGEKPAEQRWGADAGHAGSSLLHHVRSGAGSVQACGRDVINVL 573
>gb|BG323188.1|BG323188 EM1_15_H09.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 646
Score = 321 bits (695), Expect = 9e-087
Identities = 131/166 (78%), Positives = 144/166 (86%)
Frame = +1 / +3
Query: 1 PLFVTDNDQTWNPDAIVFNSWQHYGTPSYWMQTXFRRVNRAIVHPVNIXXXXXXXXXXXX 180
PLFV +NDQTWNPDAIVFNSWQHYGTPSYWMQT FR + A++HP+N+
Sbjct: 75 PLFVNNNDQTWNPDAIVFNSWQHYGTPSYWMQTLFRESSGAMIHPINMSSRYSSSLAASA 254
Query: 181 ITWQDAENSFLRVKVVNFGSDTVNLTVSTSGLGASVNALGSTATVLTSGNVMDENSFSNP 360
ITWQD+ENSFLRVKVVNFGSDTV+LT+STSGL ASVN+LGSTATVLTSGNVMDENSFSNP
Sbjct: 255 ITWQDSENSFLRVKVVNFGSDTVSLTISTSGLQASVNSLGSTATVLTSGNVMDENSFSNP 434
Query: 361 NKVAPVKSQLSNAAEQMQVTLAPHSFTAFDLALAEPKLVAEI*CVC 498
NKVAPVKSQLSNA EQMQVTLAPHSFT FDLALA+ KLVAE+* +C
Sbjct: 435 NKVAPVKSQLSNAGEQMQVTLAPHSFTTFDLALAQSKLVAEM*SMC 572
Score = 308 bits (667), Expect = 7e-083
Identities = 142/165 (86%), Positives = 143/165 (86%)
Frame = -2 / -1
Query: 497 HTHHISATSLGSASARSKAVKE*GASVTCICSAALLSWLFTGATLFGLLKEFSSMTLPDV 318
H HISATSL ASARS VKE*GASVTCICS ALLSWLFTGATLFGLLKEFSS+TLPDV
Sbjct: 571 HIDHISATSLD*ASARSNVVKE*GASVTCICSPALLSWLFTGATLFGLLKEFSSITLPDV 392
Query: 317 RTVAVDPSALTLAPSPLVETVRLTVSDPKFTTFTLRKLFSASCHVIADAASELEYRELIL 138
RTVAVDPS LTLA SPLVE VRLTVSDPKFTTFTLRKLFS SCHVIADAASELEYRELIL
Sbjct: 391 RTVAVDPSELTLA*SPLVEIVRLTVSDPKFTTFTLRKLFSESCHVIADAASELEYRELIL 212
Query: 137 TG*TMARLTLRKXVCIQ*LGVP*CCQELKTIASGFHVWSLSVTKS 3
G MA L RK VCIQ*LGVP*CCQELKTIASGFHV SL T S
Sbjct: 211 IGWIMAPLDSRKSVCIQ*LGVP*CCQELKTIASGFHV*SLLFTNS 77
Score = 249 bits (539), Expect = 3e-065
Identities = 116/167 (69%), Positives = 123/167 (73%)
Frame = +2 / +1
Query: 2 HSS*PTMTKRGTRTLLSSTPGNTMXLLATGCRXFSXESTAPLFIRLISVPGTRVRWPRLR 181
H S* TM KRGTR LLSSTPGN LL TGCR FS P I+LI VPGT+ R L+
Sbjct: 76 HYS*ITMIKRGTRMLLSSTPGNITELLVTGCRHFSVSPVVP*SIQLI*VPGTQAR*LHLQ 255
Query: 182 SRGRMQRIAS*E*RS*TSGRTPLTSRSPRADSGPASTRWDQPPPSSRLATSWTRTPSVTR 361
RGR QRIAS E*R *T GRT L SRSP+ D P STRWDQPP S LAT W RT SVT+
Sbjct: 256 LRGRTQRIASLE*RL*TLGRTLLASRSPQVDFRPVSTRWDQPPLFSHLATLWMRTLSVTQ 435
Query: 362 TRLRR*KAS*ATPRSRCRSRWLLTPSPPSIWRWLSPSLWRRYDVCAA 502
TRLRR*KAS*AT SRCRSRWLLTPSP SIWRWLSPSLW+R D C +
Sbjct: 436 TRLRR*KAS*ATLGSRCRSRWLLTPSPRSIWRWLSPSLWQRCDQCVS 576
Score = 249 bits (539), Expect = 3e-065
Identities = 112/165 (67%), Positives = 130/165 (78%)
Frame = -1 / -3
Query: 495 HTSYLRHKLGLSQRQIEGGEGVRSQRDLHLLRGVAQLAFHRRNLVRVTEGVLVHDVARRE 316
H S+L HKLGLSQRQIE GEGVRSQRDLHLL VAQLAFHRRNLV VTE VL+H+VAR E
Sbjct: 569 H*SHLCHKLGLSQRQIERGEGVRSQRDLHLLPSVAQLAFHRRNLVWVTERVLIHNVARCE 390
Query: 315 DGGG*SQRVDAGPESARGDREVNGVRPEVHDLHSQEAILCILPRDRRRGQRTRVPGTDIN 136
+ GG*SQRVD G +S GDRE N VRP+V++L+S+EAIL +LPR+ R R VPGT IN
Sbjct: 389 NSGG*SQRVDTGLKSTCGDREANSVRPKVYNLYSKEAIL*VLPRNCRCS*RA*VPGTHIN 210
Query: 135 RMNNGAVDSXEXXLHPVARSXIVLPGVEDNSVRVPRLVIVGHEEW 1
M++G E LHPV RS ++LPGVEDNS+RVPRL+IV HE W
Sbjct: 209 WMDHGTTGLTEKCLHPVTRSSVMLPGVEDNSIRVPRLIIVIHE*W 75
Score = 228 bits (492), Expect = 9e-059
Identities = 103/166 (62%), Positives = 119/166 (71%)
Frame = +3 / +2
Query: 3 TLRDRQ*PNVEPGRYCXXXXXXXXXXXXXDADXFPXSQPRHCSSG*YQFPVLEFAGRVCD 182
T+R+ Q* NVEPG YC DAD FP Q H S *Y+FPVL+ A +C+
Sbjct: 77 TIRE*Q*SNVEPGCYCLQLLATLRNS*LLDADTFP*VQWCHDPSN*YEFPVLKLASCICN 256
Query: 183 HVAGCRE*LPESEGRELRVGHR*PHGLHERTRGQRQRAGINRHRPHVWQRHGRELLQ*PE 362
+VAG RE*LP S+G +L VGH *PH LH+ T GQ Q AGINRH H+WQR+G EL Q*P+
Sbjct: 257 YVAGLRE*LP*SKGCKLWVGHC*PHDLHKWTSGQCQLAGINRHCSHIWQRYG*ELFQ*PK 436
Query: 363 QGCAGEKPAEQRRGADAGHAGSSLLHRLRSGAG*AQACGGDMMCVL 500
QGCAGEKPAEQR GADAGHAGSSLLH +RSGAG QACG D++ VL
Sbjct: 437 QGCAGEKPAEQRWGADAGHAGSSLLHHVRSGAGSVQACGRDVINVL 574
>gb|CD424232.1|CD424232 SA1_4_H05.b1_A002 Salicylic acid-treated seedlings Sorghum bicolor
cDNA clone SA1_4_H05_A002 3', mRNA sequence
Length = 632
Score = 321 bits (695), Expect = 9e-087
Identities = 131/166 (78%), Positives = 144/166 (86%)
Frame = +1 / +3
Query: 1 PLFVTDNDQTWNPDAIVFNSWQHYGTPSYWMQTXFRRVNRAIVHPVNIXXXXXXXXXXXX 180
PLFV +NDQTWNPDAIVFNSWQHYGTPSYWMQT FR + A++HP+N+
Sbjct: 39 PLFVNNNDQTWNPDAIVFNSWQHYGTPSYWMQTLFRESSGAMIHPINMSSRYSSSLAASA 218
Query: 181 ITWQDAENSFLRVKVVNFGSDTVNLTVSTSGLGASVNALGSTATVLTSGNVMDENSFSNP 360
ITWQD+ENSFLRVKVVNFGSDTV+LT+STSGL ASVN+LGSTATVLTSGNVMDENSFSNP
Sbjct: 219 ITWQDSENSFLRVKVVNFGSDTVSLTISTSGLQASVNSLGSTATVLTSGNVMDENSFSNP 398
Query: 361 NKVAPVKSQLSNAAEQMQVTLAPHSFTAFDLALAEPKLVAEI*CVC 498
NKVAPVKSQLSNA EQMQVTLAPHSFT FDLALA+ KLVAE+* +C
Sbjct: 399 NKVAPVKSQLSNAGEQMQVTLAPHSFTTFDLALAQSKLVAEM*SMC 536
Score = 308 bits (667), Expect = 7e-083
Identities = 142/165 (86%), Positives = 143/165 (86%)
Frame = -2 / -2
Query: 497 HTHHISATSLGSASARSKAVKE*GASVTCICSAALLSWLFTGATLFGLLKEFSSMTLPDV 318
H HISATSL ASARS VKE*GASVTCICS ALLSWLFTGATLFGLLKEFSS+TLPDV
Sbjct: 535 HIDHISATSLD*ASARSNVVKE*GASVTCICSPALLSWLFTGATLFGLLKEFSSITLPDV 356
Query: 317 RTVAVDPSALTLAPSPLVETVRLTVSDPKFTTFTLRKLFSASCHVIADAASELEYRELIL 138
RTVAVDPS LTLA SPLVE VRLTVSDPKFTTFTLRKLFS SCHVIADAASELEYRELIL
Sbjct: 355 RTVAVDPSELTLA*SPLVEIVRLTVSDPKFTTFTLRKLFSESCHVIADAASELEYRELIL 176
Query: 137 TG*TMARLTLRKXVCIQ*LGVP*CCQELKTIASGFHVWSLSVTKS 3
G MA L RK VCIQ*LGVP*CCQELKTIASGFHV SL T S
Sbjct: 175 IGWIMAPLDSRKSVCIQ*LGVP*CCQELKTIASGFHV*SLLFTNS 41
Score = 249 bits (539), Expect = 3e-065
Identities = 112/165 (67%), Positives = 130/165 (78%)
Frame = -1 / -1
Query: 495 HTSYLRHKLGLSQRQIEGGEGVRSQRDLHLLRGVAQLAFHRRNLVRVTEGVLVHDVARRE 316
H S+L HKLGLSQRQIE GEGVRSQRDLHLL VAQLAFHRRNLV VTE VL+H+VAR E
Sbjct: 533 H*SHLCHKLGLSQRQIERGEGVRSQRDLHLLPSVAQLAFHRRNLVWVTERVLIHNVARCE 354
Query: 315 DGGG*SQRVDAGPESARGDREVNGVRPEVHDLHSQEAILCILPRDRRRGQRTRVPGTDIN 136
+ GG*SQRVD G +S GDRE N VRP+V++L+S+EAIL +LPR+ R R VPGT IN
Sbjct: 353 NSGG*SQRVDTGLKSTCGDREANSVRPKVYNLYSKEAIL*VLPRNCRCS*RA*VPGTHIN 174
Query: 135 RMNNGAVDSXEXXLHPVARSXIVLPGVEDNSVRVPRLVIVGHEEW 1
M++G E LHPV RS ++LPGVEDNS+RVPRL+IV HE W
Sbjct: 173 WMDHGTTGLTEKCLHPVTRSSVMLPGVEDNSIRVPRLIIVIHE*W 39
Score = 249 bits (539), Expect = 3e-065
Identities = 116/167 (69%), Positives = 123/167 (73%)
Frame = +2 / +1
Query: 2 HSS*PTMTKRGTRTLLSSTPGNTMXLLATGCRXFSXESTAPLFIRLISVPGTRVRWPRLR 181
H S* TM KRGTR LLSSTPGN LL TGCR FS P I+LI VPGT+ R L+
Sbjct: 40 HYS*ITMIKRGTRMLLSSTPGNITELLVTGCRHFSVSPVVP*SIQLI*VPGTQAR*LHLQ 219
Query: 182 SRGRMQRIAS*E*RS*TSGRTPLTSRSPRADSGPASTRWDQPPPSSRLATSWTRTPSVTR 361
RGR QRIAS E*R *T GRT L SRSP+ D P STRWDQPP S LAT W RT SVT+
Sbjct: 220 LRGRTQRIASLE*RL*TLGRTLLASRSPQVDFRPVSTRWDQPPLFSHLATLWMRTLSVTQ 399
Query: 362 TRLRR*KAS*ATPRSRCRSRWLLTPSPPSIWRWLSPSLWRRYDVCAA 502
TRLRR*KAS*AT SRCRSRWLLTPSP SIWRWLSPSLW+R D C +
Sbjct: 400 TRLRR*KAS*ATLGSRCRSRWLLTPSPRSIWRWLSPSLWQRCDQCVS 540
Score = 228 bits (492), Expect = 9e-059
Identities = 103/166 (62%), Positives = 119/166 (71%)
Frame = +3 / +2
Query: 3 TLRDRQ*PNVEPGRYCXXXXXXXXXXXXXDADXFPXSQPRHCSSG*YQFPVLEFAGRVCD 182
T+R+ Q* NVEPG YC DAD FP Q H S *Y+FPVL+ A +C+
Sbjct: 41 TIRE*Q*SNVEPGCYCLQLLATLRNS*LLDADTFP*VQWCHDPSN*YEFPVLKLASCICN 220
Query: 183 HVAGCRE*LPESEGRELRVGHR*PHGLHERTRGQRQRAGINRHRPHVWQRHGRELLQ*PE 362
+VAG RE*LP S+G +L VGH *PH LH+ T GQ Q AGINRH H+WQR+G EL Q*P+
Sbjct: 221 YVAGLRE*LP*SKGCKLWVGHC*PHDLHKWTSGQCQLAGINRHCSHIWQRYG*ELFQ*PK 400
Query: 363 QGCAGEKPAEQRRGADAGHAGSSLLHRLRSGAG*AQACGGDMMCVL 500
QGCAGEKPAEQR GADAGHAGSSLLH +RSGAG QACG D++ VL
Sbjct: 401 QGCAGEKPAEQRWGADAGHAGSSLLHHVRSGAGSVQACGRDVINVL 538
>gb|CD424847.1|CD424847 SA1_9_H04.b1_A002 Salicylic acid-treated seedlings Sorghum bicolor
cDNA clone SA1_9_H04_A002 3', mRNA sequence
Length = 664
Score = 321 bits (695), Expect = 9e-087
Identities = 131/166 (78%), Positives = 144/166 (86%)
Frame = +1 / +3
Query: 1 PLFVTDNDQTWNPDAIVFNSWQHYGTPSYWMQTXFRRVNRAIVHPVNIXXXXXXXXXXXX 180
PLFV +NDQTWNPDAIVFNSWQHYGTPSYWMQT FR + A++HP+N+
Sbjct: 78 PLFVNNNDQTWNPDAIVFNSWQHYGTPSYWMQTLFRESSGAMIHPINMSSRYSSSLAASA 257
Query: 181 ITWQDAENSFLRVKVVNFGSDTVNLTVSTSGLGASVNALGSTATVLTSGNVMDENSFSNP 360
ITWQD+ENSFLRVKVVNFGSDTV+LT+STSGL ASVN+LGSTATVLTSGNVMDENSFSNP
Sbjct: 258 ITWQDSENSFLRVKVVNFGSDTVSLTISTSGLQASVNSLGSTATVLTSGNVMDENSFSNP 437
Query: 361 NKVAPVKSQLSNAAEQMQVTLAPHSFTAFDLALAEPKLVAEI*CVC 498
NKVAPVKSQLSNA EQMQVTLAPHSFT FDLALA+ KLVAE+* +C
Sbjct: 438 NKVAPVKSQLSNAGEQMQVTLAPHSFTTFDLALAQSKLVAEM*SMC 575
Score = 308 bits (667), Expect = 7e-083
Identities = 142/165 (86%), Positives = 143/165 (86%)
Frame = -2 / -1
Query: 497 HTHHISATSLGSASARSKAVKE*GASVTCICSAALLSWLFTGATLFGLLKEFSSMTLPDV 318
H HISATSL ASARS VKE*GASVTCICS ALLSWLFTGATLFGLLKEFSS+TLPDV
Sbjct: 574 HIDHISATSLD*ASARSNVVKE*GASVTCICSPALLSWLFTGATLFGLLKEFSSITLPDV 395
Query: 317 RTVAVDPSALTLAPSPLVETVRLTVSDPKFTTFTLRKLFSASCHVIADAASELEYRELIL 138
RTVAVDPS LTLA SPLVE VRLTVSDPKFTTFTLRKLFS SCHVIADAASELEYRELIL
Sbjct: 394 RTVAVDPSELTLA*SPLVEIVRLTVSDPKFTTFTLRKLFSESCHVIADAASELEYRELIL 215
Query: 137 TG*TMARLTLRKXVCIQ*LGVP*CCQELKTIASGFHVWSLSVTKS 3
G MA L RK VCIQ*LGVP*CCQELKTIASGFHV SL T S
Sbjct: 214 IGWIMAPLDSRKSVCIQ*LGVP*CCQELKTIASGFHV*SLLFTNS 80
Score = 249 bits (539), Expect = 3e-065
Identities = 112/165 (67%), Positives = 130/165 (78%)
Frame = -1 / -3
Query: 495 HTSYLRHKLGLSQRQIEGGEGVRSQRDLHLLRGVAQLAFHRRNLVRVTEGVLVHDVARRE 316
H S+L HKLGLSQRQIE GEGVRSQRDLHLL VAQLAFHRRNLV VTE VL+H+VAR E
Sbjct: 572 H*SHLCHKLGLSQRQIERGEGVRSQRDLHLLPSVAQLAFHRRNLVWVTERVLIHNVARCE 393
Query: 315 DGGG*SQRVDAGPESARGDREVNGVRPEVHDLHSQEAILCILPRDRRRGQRTRVPGTDIN 136
+ GG*SQRVD G +S GDRE N VRP+V++L+S+EAIL +LPR+ R R VPGT IN
Sbjct: 392 NSGG*SQRVDTGLKSTCGDREANSVRPKVYNLYSKEAIL*VLPRNCRCS*RA*VPGTHIN 213
Query: 135 RMNNGAVDSXEXXLHPVARSXIVLPGVEDNSVRVPRLVIVGHEEW 1
M++G E LHPV RS ++LPGVEDNS+RVPRL+IV HE W
Sbjct: 212 WMDHGTTGLTEKCLHPVTRSSVMLPGVEDNSIRVPRLIIVIHE*W 78
Score = 249 bits (539), Expect = 3e-065
Identities = 116/167 (69%), Positives = 123/167 (73%)
Frame = +2 / +1
Query: 2 HSS*PTMTKRGTRTLLSSTPGNTMXLLATGCRXFSXESTAPLFIRLISVPGTRVRWPRLR 181
H S* TM KRGTR LLSSTPGN LL TGCR FS P I+LI VPGT+ R L+
Sbjct: 79 HYS*ITMIKRGTRMLLSSTPGNITELLVTGCRHFSVSPVVP*SIQLI*VPGTQAR*LHLQ 258
Query: 182 SRGRMQRIAS*E*RS*TSGRTPLTSRSPRADSGPASTRWDQPPPSSRLATSWTRTPSVTR 361
RGR QRIAS E*R *T GRT L SRSP+ D P STRWDQPP S LAT W RT SVT+
Sbjct: 259 LRGRTQRIASLE*RL*TLGRTLLASRSPQVDFRPVSTRWDQPPLFSHLATLWMRTLSVTQ 438
Query: 362 TRLRR*KAS*ATPRSRCRSRWLLTPSPPSIWRWLSPSLWRRYDVCAA 502
TRLRR*KAS*AT SRCRSRWLLTPSP SIWRWLSPSLW+R D C +
Sbjct: 439 TRLRR*KAS*ATLGSRCRSRWLLTPSPRSIWRWLSPSLWQRCDQCVS 579
Score = 228 bits (492), Expect = 9e-059
Identities = 103/166 (62%), Positives = 119/166 (71%)
Frame = +3 / +2
Query: 3 TLRDRQ*PNVEPGRYCXXXXXXXXXXXXXDADXFPXSQPRHCSSG*YQFPVLEFAGRVCD 182
T+R+ Q* NVEPG YC DAD FP Q H S *Y+FPVL+ A +C+
Sbjct: 80 TIRE*Q*SNVEPGCYCLQLLATLRNS*LLDADTFP*VQWCHDPSN*YEFPVLKLASCICN 259
Query: 183 HVAGCRE*LPESEGRELRVGHR*PHGLHERTRGQRQRAGINRHRPHVWQRHGRELLQ*PE 362
+VAG RE*LP S+G +L VGH *PH LH+ T GQ Q AGINRH H+WQR+G EL Q*P+
Sbjct: 260 YVAGLRE*LP*SKGCKLWVGHC*PHDLHKWTSGQCQLAGINRHCSHIWQRYG*ELFQ*PK 439
Query: 363 QGCAGEKPAEQRRGADAGHAGSSLLHRLRSGAG*AQACGGDMMCVL 500
QGCAGEKPAEQR GADAGHAGSSLLH +RSGAG QACG D++ VL
Sbjct: 440 QGCAGEKPAEQRWGADAGHAGSSLLHHVRSGAGSVQACGRDVINVL 577
>gb|BG487902.1|BG487902 RHIZ2_60_G05.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 562
Score = 291 bits (629), Expect = 1e-077
Identities = 119/157 (75%), Positives = 131/157 (83%)
Frame = +1 / +2
Query: 19 NDQTWNPDAIVFNSWQHYGTPSYWMQTXFRRVNRAIVHPVNIXXXXXXXXXXXXITWQDA 198
NDQTWNPDAIVFNSWQHYGTPSYWMQT FR + A++HP I ITWQD+
Sbjct: 8 NDQTWNPDAIVFNSWQHYGTPSYWMQTLFRESSGAMLHPTTISSSYSGSLAASAITWQDS 187
Query: 199 ENSFLRVKVVNFGSDTVNLTVSTSGLGASVNALGSTATVLTSGNVMDENSFSNPNKVAPV 378
ENSFLRVKV+NFGSD V LT+STSGL AS+NALGSTATVLTS NVMDENSFSNP KV PV
Sbjct: 188 ENSFLRVKVINFGSDAVTLTISTSGLQASINALGSTATVLTSANVMDENSFSNPTKVVPV 367
Query: 379 KSQLSNAAEQMQVTLAPHSFTAFDLALAEPKLVAEI* 489
KS +SNAAEQMQVTLAPHSF++FDLALA+ KLVAE+*
Sbjct: 368 KSDMSNAAEQMQVTLAPHSFSSFDLALAQSKLVAEM* 478
Score = 260 bits (563), Expect = 1e-068
Identities = 122/157 (77%), Positives = 128/157 (81%)
Frame = -2 / -2
Query: 488 HISATSLGSASARSKAVKE*GASVTCICSAALLSWLFTGATLFGLLKEFSSMTLPDVRTV 309
HISATSL A ARS +KE*GA+VTCICSAALL LFTG TL GLLKEFSS+T DVRTV
Sbjct: 477 HISATSLD*ARARSNELKE*GANVTCICSAALLISLFTGTTLVGLLKEFSSITFADVRTV 298
Query: 308 AVDPSALTLAPSPLVETVRLTVSDPKFTTFTLRKLFSASCHVIADAASELEYRELILTG* 129
AVDP AL LA SPLVE VR+T SDPKF TFTLRKLFS SC VIADAASE E ELI+ G
Sbjct: 297 AVDPRALILAWSPLVEIVRVTASDPKFMTFTLRKLFSESCQVIADAASEPE*LELIVVGC 118
Query: 128 TMARLTLRKXVCIQ*LGVP*CCQELKTIASGFHVWSL 18
+A L RK VCIQ*LGVP*CCQELKTIASGFHVWSL
Sbjct: 117 NIAPLDSRKSVCIQ*LGVP*CCQELKTIASGFHVWSL 7
Score = 194 bits (419), Expect = 1e-048
Identities = 88/158 (55%), Positives = 112/158 (70%)
Frame = -1 / -1
Query: 492 TSYLRHKLGLSQRQIEGGEGVRSQRDLHLLRGVAQLAFHRRNLVRVTEGVLVHDVARRED 313
+S+L K GLSQ +IE EGVRSQRDLHLL +A +A HR NL VTEG+ +H V E+
Sbjct: 481 SSHLGDKFGLSQGEIERAEGVRSQRDLHLLCSIAHIALHRHNLGWVTEGIFIHHVC*CEN 302
Query: 312 GGG*SQRVDAGPESARGDREVNGVRPEVHDLHSQEAILCILPRDRRRGQRTRVPGTDINR 133
GG*SQ VD G ES RGD + + + P+V+DL+S+EA+L +LP +RRR +RTRV G D +
Sbjct: 301 SGG*SQSVDTGLESTRGDCQGHSI*PKVYDLYSKEAVL*VLPSNRRRCERTRVAGADCSW 122
Query: 132 MNNGAVDSXEXXLHPVARSXIVLPGVEDNSVRVPRLVI 19
M + E LHPV RS ++LPGVED+SV VPRLVI
Sbjct: 121 M*HSTTRLAEKRLHPVTRSAVMLPGVEDDSVWVPRLVI 8
Score = 183 bits (394), Expect = 3e-045
Identities = 91/158 (57%), Positives = 104/158 (65%)
Frame = +2 / +3
Query: 20 MTKRGTRTLLSSTPGNTMXLLATGCRXFSXESTAPLFIRLISVPGTRVRWPRLRSRGRMQ 199
MTKRGT+TL SSTPG+ LL TGCR FS +I+L S P T VR RLR GR Q
Sbjct: 9 MTKRGTQTLSSSTPGSITALLVTGCRRFSASLVVLCYIQLQSAPATLVRSQRLRLLGRTQ 188
Query: 200 RIAS*E*RS*TSGRTPLTSRSPRADSGPASTRWDQPPPSSRLATSWTRTPSVTRTRLRR* 379
R AS E*RS*T G+ +SPR DS P ST WDQPP S T W + PSVT+ RL R*
Sbjct: 189 RTASLE*RS*TLGQML*P*QSPRVDSRPVSTLWDQPPLFSHQQT*WMKIPSVTQPRLCR* 368
Query: 380 KAS*ATPRSRCRSRWLLTPSPPSIWRWLSPSLWRRYDV 493
+A *A +SRCRSRWLLTPS SI WLSP+L R ++
Sbjct: 369 RAI*AMLQSRCRSRWLLTPSARSISPWLSPNLSPRCEL 482
Score = 133 bits (286), Expect(2) = 2e-031
Identities = 68/133 (51%), Positives = 82/133 (61%)
Frame = +3 / +1
Query: 90 DADXFPXSQPRHCSSG*YQFPVLEFAGRVCDHVAGCRE*LPESEGRELRVGHR*PHGLHE 269
DAD FP + +S Q +L FA VCD++AG RE LP S+G +L V P LHE
Sbjct: 79 DADAFPRV*WCYVTSNYNQLQLLWFARSVCDYLAGLREQLP*SKGHKLWVRCCDPDNLHE 258
Query: 270 RTRGQRQRAGINRHRPHVWQRHGRELLQ*PEQGCAGEKPAEQRRGADAGHAGSSLLHRLR 449
T GQ QR+GINRH H+ +R G + LQ*P QGCAGE+ EQ ADAGH GSSLL +R
Sbjct: 259 WTPGQYQRSGINRHCSHISKRDG*KFLQ*PNQGCAGEERYEQCCRADAGHVGSSLLQLVR 438
Query: 450 SGAG*AQACGGDM 488
S G Q C D+
Sbjct: 439 SRPGSVQTCRRDV 477
Score = 23.5 bits (45), Expect(2) = 2e-031
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +3 / +1
Query: 18 Q*PNVEPGRY 47
Q*PNVEP RY
Sbjct: 7 Q*PNVEPRRY 36
>gb|CF072326.1|CF072326 FE1_2_H07.b1_A002 Iron-deficient seedlings Sorghum bicolor cDNA
clone FE1_2_H07_A002 3', mRNA sequence
Length = 544
Score = 280 bits (606), Expect = 2e-074
Identities = 128/148 (86%), Positives = 130/148 (87%)
Frame = -2 / -1
Query: 497 HTHHISATSLGSASARSKAVKE*GASVTCICSAALLSWLFTGATLFGLLKEFSSMTLPDV 318
H HISATSL ASARS VKE*GASVTCICS ALLSWLFTGATLFGLLKEFSS+TLPDV
Sbjct: 445 HIDHISATSLD*ASARSNVVKE*GASVTCICSPALLSWLFTGATLFGLLKEFSSITLPDV 266
Query: 317 RTVAVDPSALTLAPSPLVETVRLTVSDPKFTTFTLRKLFSASCHVIADAASELEYRELIL 138
RTVAVDPS LTLA SPLVE VRLTVSDPKFTTFTLRKLFS SCHVIA+AASELEYRELIL
Sbjct: 265 RTVAVDPSELTLA*SPLVEIVRLTVSDPKFTTFTLRKLFSESCHVIANAASELEYRELIL 86
Query: 137 TG*TMARLTLRKXVCIQ*LGVP*CCQEL 54
G MA L RK VCIQ*LGVP*CCQEL
Sbjct: 85 IGWIMAPLDSRKSVCIQ*LGVP*CCQEL 2
Score = 278 bits (602), Expect = 6e-074
Identities = 115/148 (77%), Positives = 127/148 (85%)
Frame = +1 / +3
Query: 55 NSWQHYGTPSYWMQTXFRRVNRAIVHPVNIXXXXXXXXXXXXITWQDAENSFLRVKVVNF 234
NSWQHYGTPSYWMQT FR + A++HP+N+ ITWQD+ENSFLRVKVVNF
Sbjct: 3 NSWQHYGTPSYWMQTLFRESSGAMIHPINMSSRYSSSLAAFAITWQDSENSFLRVKVVNF 182
Query: 235 GSDTVNLTVSTSGLGASVNALGSTATVLTSGNVMDENSFSNPNKVAPVKSQLSNAAEQMQ 414
GSDTV+LT+STSGL ASVN+LGSTATVLTSGNVMDENSFSNPNKVAPVKSQLSNA EQMQ
Sbjct: 183 GSDTVSLTISTSGLQASVNSLGSTATVLTSGNVMDENSFSNPNKVAPVKSQLSNAGEQMQ 362
Query: 415 VTLAPHSFTAFDLALAEPKLVAEI*CVC 498
VTLAPHSFT FDLALA+ KLVAE+* +C
Sbjct: 363 VTLAPHSFTTFDLALAQSKLVAEM*SMC 446
Score = 225 bits (485), Expect = 8e-058
Identities = 103/150 (68%), Positives = 110/150 (73%)
Frame = +2 / +1
Query: 53 STPGNTMXLLATGCRXFSXESTAPLFIRLISVPGTRVRWPRLRSRGRMQRIAS*E*RS*T 232
STPGN LL TGCR FS P I+LI VPGT+ R L+ RGR QRIAS E*R *T
Sbjct: 1 STPGNITELLVTGCRHFSVSPVVP*SIQLI*VPGTQAR*LHLQLRGRTQRIASLE*RL*T 180
Query: 233 SGRTPLTSRSPRADSGPASTRWDQPPPSSRLATSWTRTPSVTRTRLRR*KAS*ATPRSRC 412
GRT L SRSP+ D P STRWDQPP S LAT W RT SVT+TRLRR*KAS*AT SRC
Sbjct: 181 LGRTLLASRSPQVDFRPVSTRWDQPPLFSHLATLWMRTLSVTQTRLRR*KAS*ATLGSRC 360
Query: 413 RSRWLLTPSPPSIWRWLSPSLWRRYDVCAA 502
RSRWLLTPSP SIWRWLSPSLW+R D C +
Sbjct: 361 RSRWLLTPSPRSIWRWLSPSLWQRCDQCVS 450
Score = 213 bits (460), Expect = 2e-054
Identities = 97/147 (65%), Positives = 114/147 (77%)
Frame = -1 / -3
Query: 495 HTSYLRHKLGLSQRQIEGGEGVRSQRDLHLLRGVAQLAFHRRNLVRVTEGVLVHDVARRE 316
H S+L HKLGLSQRQIE GEGVRSQRDLHLL VAQLAFHRRNLV VTE VL+H+VAR E
Sbjct: 443 H*SHLCHKLGLSQRQIERGEGVRSQRDLHLLPSVAQLAFHRRNLVWVTERVLIHNVARCE 264
Query: 315 DGGG*SQRVDAGPESARGDREVNGVRPEVHDLHSQEAILCILPRDRRRGQRTRVPGTDIN 136
+ GG*SQRVD G +S GDRE N VRP+V++L+S+EAIL +LPR+ + R VPGT IN
Sbjct: 263 NSGG*SQRVDTGLKSTCGDREANSVRPKVYNLYSKEAIL*VLPRNCKCS*RA*VPGTHIN 84
Query: 135 RMNNGAVDSXEXXLHPVARSXIVLPGV 55
M++G E LHPV RS ++LPGV
Sbjct: 83 WMDHGTTGLTEKCLHPVTRSSVMLPGV 3
Score = 208 bits (449), Expect = 8e-053
Identities = 92/137 (67%), Positives = 106/137 (77%)
Frame = +3 / +2
Query: 90 DADXFPXSQPRHCSSG*YQFPVLEFAGRVCDHVAGCRE*LPESEGRELRVGHR*PHGLHE 269
DAD FP Q H S *Y+FPVL+ A +C++VAG RE*LP S+G +L VGH *PH LH+
Sbjct: 38 DADTFP*VQWCHDPSN*YEFPVLKLASCICNYVAGLRE*LP*SKGCKLWVGHC*PHDLHK 217
Query: 270 RTRGQRQRAGINRHRPHVWQRHGRELLQ*PEQGCAGEKPAEQRRGADAGHAGSSLLHRLR 449
T GQ Q AGINRH H+WQR+G EL Q*P+QGCAGEKPAEQR GADAGHAGSSLLH +R
Sbjct: 218 WTSGQCQLAGINRHCSHIWQRYG*ELFQ*PKQGCAGEKPAEQRWGADAGHAGSSLLHHVR 397
Query: 450 SGAG*AQACGGDMMCVL 500
SGAG QACG D++ VL
Sbjct: 398 SGAGSVQACGRDVINVL 448
>gb|BM327869.1|BM327869 PIC1_18_E04.g1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 551
Score = 276 bits (597), Expect = 3e-073
Identities = 126/145 (86%), Positives = 127/145 (87%)
Frame = -2 / -2
Query: 497 HTHHISATSLGSASARSKAVKE*GASVTCICSAALLSWLFTGATLFGLLKEFSSMTLPDV 318
H HISATSL ASARS VKE*GASVTCICS ALLSWLFTGATLFGLLKEFSS+TLPDV
Sbjct: 436 HIDHISATSLD*ASARSNVVKE*GASVTCICSPALLSWLFTGATLFGLLKEFSSITLPDV 257
Query: 317 RTVAVDPSALTLAPSPLVETVRLTVSDPKFTTFTLRKLFSASCHVIADAASELEYRELIL 138
RTVAVDPS LTLA SPLVE VRLTVSDPKFTTFTLRKLFS SCHVIADAASELEYRELIL
Sbjct: 256 RTVAVDPSELTLA*SPLVEIVRLTVSDPKFTTFTLRKLFSESCHVIADAASELEYRELIL 77
Query: 137 TG*TMARLTLRKXVCIQ*LGVP*CC 63
G MA L RK VCIQ*LGVP*CC
Sbjct: 76 IGWIMAPLDSRKSVCIQ*LGVP*CC 2
Score = 269 bits (582), Expect(2) = 1e-072
Identities = 112/145 (77%), Positives = 124/145 (85%)
Frame = +1 / +3
Query: 64 QHYGTPSYWMQTXFRRVNRAIVHPVNIXXXXXXXXXXXXITWQDAENSFLRVKVVNFGSD 243
QHYGTPSYWMQT FR + A++HP+N+ ITWQD+ENSFLRVKVVNFGSD
Sbjct: 3 QHYGTPSYWMQTLFRESSGAMIHPINMSSRYSSSLAASAITWQDSENSFLRVKVVNFGSD 182
Query: 244 TVNLTVSTSGLGASVNALGSTATVLTSGNVMDENSFSNPNKVAPVKSQLSNAAEQMQVTL 423
TV+LT+STSGL ASVN+LGSTATVLTSGNVMDENSFSNPNKVAPVKSQLSNA EQMQVTL
Sbjct: 183 TVSLTISTSGLQASVNSLGSTATVLTSGNVMDENSFSNPNKVAPVKSQLSNAGEQMQVTL 362
Query: 424 APHSFTAFDLALAEPKLVAEI*CVC 498
APHSFT FDLALA+ KLVAE+* +C
Sbjct: 363 APHSFTTFDLALAQSKLVAEM*SMC 437
Score = 217 bits (469), Expect = 1e-055
Identities = 100/147 (68%), Positives = 107/147 (72%)
Frame = +2 / +1
Query: 62 GNTMXLLATGCRXFSXESTAPLFIRLISVPGTRVRWPRLRSRGRMQRIAS*E*RS*TSGR 241
GN LL TGCR FS P I+LI VPGT+ R L+ RGR QRIAS E*R *T GR
Sbjct: 1 GNITELLVTGCRHFSVSPVVP*SIQLI*VPGTQAR*LHLQLRGRTQRIASLE*RL*TLGR 180
Query: 242 TPLTSRSPRADSGPASTRWDQPPPSSRLATSWTRTPSVTRTRLRR*KAS*ATPRSRCRSR 421
T L SRSP+ D P STRWDQPP S LAT W RT SVT+TRLRR*KAS*AT SRCRSR
Sbjct: 181 TLLASRSPQVDFRPVSTRWDQPPLFSHLATLWMRTLSVTQTRLRR*KAS*ATLGSRCRSR 360
Query: 422 WLLTPSPPSIWRWLSPSLWRRYDVCAA 502
WLLTPSP SIWRWLSPSLW+R D C +
Sbjct: 361 WLLTPSPRSIWRWLSPSLWQRCDQCVS 441
Score = 208 bits (449), Expect = 8e-053
Identities = 92/137 (67%), Positives = 106/137 (77%)
Frame = +3 / +2
Query: 90 DADXFPXSQPRHCSSG*YQFPVLEFAGRVCDHVAGCRE*LPESEGRELRVGHR*PHGLHE 269
DAD FP Q H S *Y+FPVL+ A +C++VAG RE*LP S+G +L VGH *PH LH+
Sbjct: 29 DADTFP*VQWCHDPSN*YEFPVLKLASCICNYVAGLRE*LP*SKGCKLWVGHC*PHDLHK 208
Query: 270 RTRGQRQRAGINRHRPHVWQRHGRELLQ*PEQGCAGEKPAEQRRGADAGHAGSSLLHRLR 449
T GQ Q AGINRH H+WQR+G EL Q*P+QGCAGEKPAEQR GADAGHAGSSLLH +R
Sbjct: 209 WTSGQCQLAGINRHCSHIWQRYG*ELFQ*PKQGCAGEKPAEQRWGADAGHAGSSLLHHVR 388
Query: 450 SGAG*AQACGGDMMCVL 500
SGAG QACG D++ VL
Sbjct: 389 SGAGSVQACGRDVINVL 439
Score = 207 bits (446), Expect = 2e-052
Identities = 95/144 (65%), Positives = 111/144 (77%)
Frame = -1 / -1
Query: 495 HTSYLRHKLGLSQRQIEGGEGVRSQRDLHLLRGVAQLAFHRRNLVRVTEGVLVHDVARRE 316
H S+L HKLGLSQRQIE GEGVRSQRDLHLL VAQLAFHRRNLV VTE VL+H+VAR E
Sbjct: 434 H*SHLCHKLGLSQRQIERGEGVRSQRDLHLLPSVAQLAFHRRNLVWVTERVLIHNVARCE 255
Query: 315 DGGG*SQRVDAGPESARGDREVNGVRPEVHDLHSQEAILCILPRDRRRGQRTRVPGTDIN 136
+ GG*SQRVD G +S GDRE N VRP+V++L+S+EAIL +LPR+ R R VPGT IN
Sbjct: 254 NSGG*SQRVDTGLKSTCGDREANSVRPKVYNLYSKEAIL*VLPRNCRCS*RA*VPGTHIN 75
Query: 135 RMNNGAVDSXEXXLHPVARSXIVL 64
M++G E LHPV RS ++L
Sbjct: 74 WMDHGTTGLTEKCLHPVTRSSVML 3
Score = 25.8 bits (50), Expect(2) = 1e-072
Identities = 9/29 (31%), Positives = 17/29 (58%)
Frame = +1 / +3
Query: 604 VPRYRITYYVLLLHEIKTTSGFCLVLVGF 690
+PRYR Y + +++ +CL+L+ F
Sbjct: 465 IPRYRYIYLLYYMNKNHIRFVWCLILICF 551
>gb|BG357415.1|BG357415 OV2_29_F03.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 529
Score = 272 bits (588), Expect = 5e-072
Identities = 125/144 (86%), Positives = 126/144 (87%)
Frame = -2 / -3
Query: 497 HTHHISATSLGSASARSKAVKE*GASVTCICSAALLSWLFTGATLFGLLKEFSSMTLPDV 318
H HISATSL ASARS VKE*GASVTCICS ALLSWLFTGATLFGLLKEFSS+TLPDV
Sbjct: 434 HIDHISATSLD*ASARSNVVKE*GASVTCICSPALLSWLFTGATLFGLLKEFSSITLPDV 255
Query: 317 RTVAVDPSALTLAPSPLVETVRLTVSDPKFTTFTLRKLFSASCHVIADAASELEYRELIL 138
RTVAVDPS LTLA SPLVE VRLTVSDPKFTTFTLRKLFS SCHVIADAASELEYRELIL
Sbjct: 254 RTVAVDPSELTLA*SPLVEIVRLTVSDPKFTTFTLRKLFSESCHVIADAASELEYRELIL 75
Query: 137 TG*TMARLTLRKXVCIQ*LGVP*C 66
G MA L RK VCIQ*LGVP*C
Sbjct: 74 IGWIMAPLDSRKSVCIQ*LGVP*C 3
Score = 269 bits (582), Expect = 4e-071
Identities = 112/145 (77%), Positives = 124/145 (85%)
Frame = +1 / +1
Query: 64 QHYGTPSYWMQTXFRRVNRAIVHPVNIXXXXXXXXXXXXITWQDAENSFLRVKVVNFGSD 243
QHYGTPSYWMQT FR + A++HP+N+ ITWQD+ENSFLRVKVVNFGSD
Sbjct: 1 QHYGTPSYWMQTLFRESSGAMIHPINMSSRYSSSLAASAITWQDSENSFLRVKVVNFGSD 180
Query: 244 TVNLTVSTSGLGASVNALGSTATVLTSGNVMDENSFSNPNKVAPVKSQLSNAAEQMQVTL 423
TV+LT+STSGL ASVN+LGSTATVLTSGNVMDENSFSNPNKVAPVKSQLSNA EQMQVTL
Sbjct: 181 TVSLTISTSGLQASVNSLGSTATVLTSGNVMDENSFSNPNKVAPVKSQLSNAGEQMQVTL 360
Query: 424 APHSFTAFDLALAEPKLVAEI*CVC 498
APHSFT FDLALA+ KLVAE+* +C
Sbjct: 361 APHSFTTFDLALAQSKLVAEM*SMC 435
Score = 215 bits (463), Expect = 9e-055
Identities = 99/146 (67%), Positives = 106/146 (72%)
Frame = +2 / +2
Query: 65 NTMXLLATGCRXFSXESTAPLFIRLISVPGTRVRWPRLRSRGRMQRIAS*E*RS*TSGRT 244
N LL TGCR FS P I+LI VPGT+ R L+ RGR QRIAS E*R *T GRT
Sbjct: 2 NITELLVTGCRHFSVSPVVP*SIQLI*VPGTQAR*LHLQLRGRTQRIASLE*RL*TLGRT 181
Query: 245 PLTSRSPRADSGPASTRWDQPPPSSRLATSWTRTPSVTRTRLRR*KAS*ATPRSRCRSRW 424
L SRSP+ D P STRWDQPP S LAT W RT SVT+TRLRR*KAS*AT SRCRSRW
Sbjct: 182 LLASRSPQVDFRPVSTRWDQPPLFSHLATLWMRTLSVTQTRLRR*KAS*ATLGSRCRSRW 361
Query: 425 LLTPSPPSIWRWLSPSLWRRYDVCAA 502
LLTPSP SIWRWLSPSLW+R D C +
Sbjct: 362 LLTPSPRSIWRWLSPSLWQRCDQCVS 439
Score = 208 bits (449), Expect = 8e-053
Identities = 92/137 (67%), Positives = 106/137 (77%)
Frame = +3 / +3
Query: 90 DADXFPXSQPRHCSSG*YQFPVLEFAGRVCDHVAGCRE*LPESEGRELRVGHR*PHGLHE 269
DAD FP Q H S *Y+FPVL+ A +C++VAG RE*LP S+G +L VGH *PH LH+
Sbjct: 27 DADTFP*VQWCHDPSN*YEFPVLKLASCICNYVAGLRE*LP*SKGCKLWVGHC*PHDLHK 206
Query: 270 RTRGQRQRAGINRHRPHVWQRHGRELLQ*PEQGCAGEKPAEQRRGADAGHAGSSLLHRLR 449
T GQ Q AGINRH H+WQR+G EL Q*P+QGCAGEKPAEQR GADAGHAGSSLLH +R
Sbjct: 207 WTSGQCQLAGINRHCSHIWQRYG*ELFQ*PKQGCAGEKPAEQRWGADAGHAGSSLLHHVR 386
Query: 450 SGAG*AQACGGDMMCVL 500
SGAG QACG D++ VL
Sbjct: 387 SGAGSVQACGRDVINVL 437
Score = 207 bits (446), Expect = 2e-052
Identities = 95/144 (65%), Positives = 111/144 (77%)
Frame = -1 / -2
Query: 495 HTSYLRHKLGLSQRQIEGGEGVRSQRDLHLLRGVAQLAFHRRNLVRVTEGVLVHDVARRE 316
H S+L HKLGLSQRQIE GEGVRSQRDLHLL VAQLAFHRRNLV VTE VL+H+VAR E
Sbjct: 432 H*SHLCHKLGLSQRQIERGEGVRSQRDLHLLPSVAQLAFHRRNLVWVTERVLIHNVARCE 253
Query: 315 DGGG*SQRVDAGPESARGDREVNGVRPEVHDLHSQEAILCILPRDRRRGQRTRVPGTDIN 136
+ GG*SQRVD G +S GDRE N VRP+V++L+S+EAIL +LPR+ R R VPGT IN
Sbjct: 252 NSGG*SQRVDTGLKSTCGDREANSVRPKVYNLYSKEAIL*VLPRNCRCS*RA*VPGTHIN 73
Query: 135 RMNNGAVDSXEXXLHPVARSXIVL 64
M++G E LHPV RS ++L
Sbjct: 72 WMDHGTTGLTEKCLHPVTRSSVML 1
>gb|BM331190.1|BM331190 PIC1_70_G09.g1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 627
Score = 257 bits (556), Expect(2) = 1e-071
Identities = 118/137 (86%), Positives = 119/137 (86%)
Frame = -2 / -1
Query: 497 HTHHISATSLGSASARSKAVKE*GASVTCICSAALLSWLFTGATLFGLLKEFSSMTLPDV 318
H HISATSL ASARS VKE*GASVTCICS ALLSWLFTGATLFGLLKEFSS+TLPDV
Sbjct: 411 HIDHISATSLD*ASARSNVVKE*GASVTCICSPALLSWLFTGATLFGLLKEFSSITLPDV 232
Query: 317 RTVAVDPSALTLAPSPLVETVRLTVSDPKFTTFTLRKLFSASCHVIADAASELEYRELIL 138
RTVAVDPS LTLA SPLVE VRLTVSDPKFTTFTLRKLFS SCHVIADAASELEYRELIL
Sbjct: 231 RTVAVDPSELTLA*SPLVEIVRLTVSDPKFTTFTLRKLFSESCHVIADAASELEYRELIL 52
Query: 137 TG*TMARLTLRKXVCIQ 87
G MA L RK VCIQ
Sbjct: 51 IGWIMAPLDSRKSVCIQ 1
Score = 247 bits (533), Expect(2) = 1e-067
Identities = 104/137 (75%), Positives = 116/137 (84%)
Frame = +1 / +2
Query: 88 WMQTXFRRVNRAIVHPVNIXXXXXXXXXXXXITWQDAENSFLRVKVVNFGSDTVNLTVST 267
WMQT FR + A++HP+N+ ITWQD+ENSFLRVKVVNFGSDTV+LT+ST
Sbjct: 2 WMQTLFRESSGAMIHPINMSSRYSSSLAASAITWQDSENSFLRVKVVNFGSDTVSLTIST 181
Query: 268 SGLGASVNALGSTATVLTSGNVMDENSFSNPNKVAPVKSQLSNAAEQMQVTLAPHSFTAF 447
SGL ASVN+LGSTATVLTSGNVMDENSFSNPNKVAPVKSQLSNA EQMQVTLAPHSFT F
Sbjct: 182 SGLQASVNSLGSTATVLTSGNVMDENSFSNPNKVAPVKSQLSNAGEQMQVTLAPHSFTTF 361
Query: 448 DLALAEPKLVAEI*CVC 498
DLALA+ KLVAE+* +C
Sbjct: 362 DLALAQSKLVAEM*SMC 412
Score = 208 bits (449), Expect(2) = 5e-056
Identities = 92/137 (67%), Positives = 106/137 (77%)
Frame = +3 / +1
Query: 90 DADXFPXSQPRHCSSG*YQFPVLEFAGRVCDHVAGCRE*LPESEGRELRVGHR*PHGLHE 269
DAD FP Q H S *Y+FPVL+ A +C++VAG RE*LP S+G +L VGH *PH LH+
Sbjct: 4 DADTFP*VQWCHDPSN*YEFPVLKLASCICNYVAGLRE*LP*SKGCKLWVGHC*PHDLHK 183
Query: 270 RTRGQRQRAGINRHRPHVWQRHGRELLQ*PEQGCAGEKPAEQRRGADAGHAGSSLLHRLR 449
T GQ Q AGINRH H+WQR+G EL Q*P+QGCAGEKPAEQR GADAGHAGSSLLH +R
Sbjct: 184 WTSGQCQLAGINRHCSHIWQRYG*ELFQ*PKQGCAGEKPAEQRWGADAGHAGSSLLHHVR 363
Query: 450 SGAG*AQACGGDMMCVL 500
SGAG QACG D++ VL
Sbjct: 364 SGAGSVQACGRDVINVL 414
Score = 207 bits (447), Expect(2) = 1e-052
Identities = 95/138 (68%), Positives = 102/138 (73%)
Frame = +2 / +3
Query: 89 GCRXFSXESTAPLFIRLISVPGTRVRWPRLRSRGRMQRIAS*E*RS*TSGRTPLTSRSPR 268
GCR FS P I+LI VPGT+ R L+ RGR QRIAS E*R *T GRT L SRSP+
Sbjct: 3 GCRHFSVSPVVP*SIQLI*VPGTQAR*LHLQLRGRTQRIASLE*RL*TLGRTLLASRSPQ 182
Query: 269 ADSGPASTRWDQPPPSSRLATSWTRTPSVTRTRLRR*KAS*ATPRSRCRSRWLLTPSPPS 448
D P STRWDQPP S LAT W RT SVT+TRLRR*KAS*AT SRCRSRWLLTPSP S
Sbjct: 183 VDFRPVSTRWDQPPLFSHLATLWMRTLSVTQTRLRR*KAS*ATLGSRCRSRWLLTPSPRS 362
Query: 449 IWRWLSPSLWRRYDVCAA 502
IWRWLSPSLW+R D C +
Sbjct: 363 IWRWLSPSLWQRCDQCVS 416
Score = 197 bits (425), Expect(2) = 3e-051
Identities = 91/136 (66%), Positives = 105/136 (77%)
Frame = -1 / -3
Query: 495 HTSYLRHKLGLSQRQIEGGEGVRSQRDLHLLRGVAQLAFHRRNLVRVTEGVLVHDVARRE 316
H S+L HKLGLSQRQIE GEGVRSQRDLHLL VAQLAFHRRNLV VTE VL+H+VAR E
Sbjct: 409 H*SHLCHKLGLSQRQIERGEGVRSQRDLHLLPSVAQLAFHRRNLVWVTERVLIHNVARCE 230
Query: 315 DGGG*SQRVDAGPESARGDREVNGVRPEVHDLHSQEAILCILPRDRRRGQRTRVPGTDIN 136
+ GG*SQRVD G +S GDRE N VRP+V++L+S+EAIL +LPR+ R R VPGT IN
Sbjct: 229 NSGG*SQRVDTGLKSTCGDREANSVRPKVYNLYSKEAIL*VLPRNCRCS*RA*VPGTHIN 50
Query: 135 RMNNGAVDSXEXXLHP 88
M++G E LHP
Sbjct: 49 WMDHGTTGLTEKCLHP 2
Score = 36.3 bits (73), Expect(2) = 1e-071
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -2 / -3
Query: 719 HAKQTRTGERKPTNTKQKPDVVFI 648
HA+QTRT E T KPDV+FI
Sbjct: 550 HAQQTRTEEANQNQTPNKPDVIFI 479
Score = 33.1 bits (66), Expect(2) = 5e-056
Identities = 16/32 (50%), Positives = 19/32 (59%)
Frame = +3 / +2
Query: 648 NKNHIRFLLGVGWFPFSCTCLLCMFITIYCTG 743
NKNHIRF+ + F TCLLCM T +G
Sbjct: 479 NKNHIRFVWCLILICFLRTCLLCMADTQTLSG 574
Score = 31.8 bits (63), Expect(2) = 1e-067
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = +1 / +2
Query: 604 VPRYRITYYVLLLHEIKTTSGFCLVLVGFLSPVRVCFA 717
+PRYR Y + +++ +CL+L+ FL +C A
Sbjct: 440 IPRYRYIYLLYYMNKNHIRFVWCLILICFLRTCLLCMA 553
Score = 28.1 bits (55), Expect(2) = 3e-051
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -1 / -2
Query: 717 CKANTYRRKETNQHQAKT*CGFY 649
C ANTY ++ + +T*C FY
Sbjct: 548 CTANTYGGSKSKSNTKQT*CDFY 480
Score = 23.1 bits (44), Expect(2) = 1e-052
Identities = 13/23 (56%), Positives = 13/23 (56%)
Frame = +1 / +3
Query: 649 IKTTSGFCLVLVGFLSPVRVCFA 717
IK TSG V F S VRVC A
Sbjct: 480 IKITSGLFGV*F*FASSVRVCCA 548
>gb|CF072848.1|CF072848 FE1_26_E01.b1_A002 Iron-deficient seedlings Sorghum bicolor cDNA
clone FE1_26_E01_A002 3', mRNA sequence
Length = 514
Score = 258 bits (557), Expect = 1e-067
Identities = 119/138 (86%), Positives = 120/138 (86%)
Frame = -2 / -3
Query: 497 HTHHISATSLGSASARSKAVKE*GASVTCICSAALLSWLFTGATLFGLLKEFSSMTLPDV 318
H HISATSL ASARS VKE*GASVTCICS ALLSWLFTGATLFGLLKEFSS+TLPDV
Sbjct: 416 HIDHISATSLD*ASARSNVVKE*GASVTCICSPALLSWLFTGATLFGLLKEFSSITLPDV 237
Query: 317 RTVAVDPSALTLAPSPLVETVRLTVSDPKFTTFTLRKLFSASCHVIADAASELEYRELIL 138
RTVAVDPS LTLA SPLVE VRLTVSDPKFTTFTLRKLFS SCHVIADAASELEYRELIL
Sbjct: 236 RTVAVDPSELTLA*SPLVEIVRLTVSDPKFTTFTLRKLFSESCHVIADAASELEYRELIL 57
Query: 137 TG*TMARLTLRKXVCIQ* 84
G MA L RK VCIQ*
Sbjct: 56 IGWIMAPLDSRKSVCIQ* 3
Score = 252 bits (544), Expect = 6e-066
Identities = 106/139 (76%), Positives = 118/139 (84%)
Frame = +1 / +1
Query: 82 SYWMQTXFRRVNRAIVHPVNIXXXXXXXXXXXXITWQDAENSFLRVKVVNFGSDTVNLTV 261
SYWMQT FR + A++HP+N+ ITWQD+ENSFLRVKVVNFGSDTV+LT+
Sbjct: 1 SYWMQTLFRESSGAMIHPINMSSRYSSSLAASAITWQDSENSFLRVKVVNFGSDTVSLTI 180
Query: 262 STSGLGASVNALGSTATVLTSGNVMDENSFSNPNKVAPVKSQLSNAAEQMQVTLAPHSFT 441
STSGL ASVN+LGSTATVLTSGNVMDENSFSNPNKVAPVKSQLSNA EQMQVTLAPHSFT
Sbjct: 181 STSGLQASVNSLGSTATVLTSGNVMDENSFSNPNKVAPVKSQLSNAGEQMQVTLAPHSFT 360
Query: 442 AFDLALAEPKLVAEI*CVC 498
FDLALA+ KLVAE+* +C
Sbjct: 361 TFDLALAQSKLVAEM*SMC 417
Score = 210 bits (452), Expect = 3e-053
Identities = 96/139 (69%), Positives = 103/139 (74%)
Frame = +2 / +2
Query: 86 TGCRXFSXESTAPLFIRLISVPGTRVRWPRLRSRGRMQRIAS*E*RS*TSGRTPLTSRSP 265
TGCR FS P I+LI VPGT+ R L+ RGR QRIAS E*R *T GRT L SRSP
Sbjct: 5 TGCRHFSVSPVVP*SIQLI*VPGTQAR*LHLQLRGRTQRIASLE*RL*TLGRTLLASRSP 184
Query: 266 RADSGPASTRWDQPPPSSRLATSWTRTPSVTRTRLRR*KAS*ATPRSRCRSRWLLTPSPP 445
+ D P STRWDQPP S LAT W RT SVT+TRLRR*KAS*AT SRCRSRWLLTPSP
Sbjct: 185 QVDFRPVSTRWDQPPLFSHLATLWMRTLSVTQTRLRR*KAS*ATLGSRCRSRWLLTPSPR 364
Query: 446 SIWRWLSPSLWRRYDVCAA 502
SIWRWLSPSLW+R D C +
Sbjct: 365 SIWRWLSPSLWQRCDQCVS 421
Score = 208 bits (449), Expect = 8e-053
Identities = 92/137 (67%), Positives = 106/137 (77%)
Frame = +3 / +3
Query: 90 DADXFPXSQPRHCSSG*YQFPVLEFAGRVCDHVAGCRE*LPESEGRELRVGHR*PHGLHE 269
DAD FP Q H S *Y+FPVL+ A +C++VAG RE*LP S+G +L VGH *PH LH+
Sbjct: 9 DADTFP*VQWCHDPSN*YEFPVLKLASCICNYVAGLRE*LP*SKGCKLWVGHC*PHDLHK 188
Query: 270 RTRGQRQRAGINRHRPHVWQRHGRELLQ*PEQGCAGEKPAEQRRGADAGHAGSSLLHRLR 449
T GQ Q AGINRH H+WQR+G EL Q*P+QGCAGEKPAEQR GADAGHAGSSLLH +R
Sbjct: 189 WTSGQCQLAGINRHCSHIWQRYG*ELFQ*PKQGCAGEKPAEQRWGADAGHAGSSLLHHVR 368
Query: 450 SGAG*AQACGGDMMCVL 500
SGAG QACG D++ VL
Sbjct: 369 SGAGSVQACGRDVINVL 419
Score = 199 bits (429), Expect = 5e-050
Identities = 92/137 (67%), Positives = 106/137 (77%)
Frame = -1 / -2
Query: 495 HTSYLRHKLGLSQRQIEGGEGVRSQRDLHLLRGVAQLAFHRRNLVRVTEGVLVHDVARRE 316
H S+L HKLGLSQRQIE GEGVRSQRDLHLL VAQLAFHRRNLV VTE VL+H+VAR E
Sbjct: 414 H*SHLCHKLGLSQRQIERGEGVRSQRDLHLLPSVAQLAFHRRNLVWVTERVLIHNVARCE 235
Query: 315 DGGG*SQRVDAGPESARGDREVNGVRPEVHDLHSQEAILCILPRDRRRGQRTRVPGTDIN 136
+ GG*SQRVD G +S GDRE N VRP+V++L+S+EAIL +LPR+ R R VPGT IN
Sbjct: 234 NSGG*SQRVDTGLKSTCGDREANSVRPKVYNLYSKEAIL*VLPRNCRCS*RA*VPGTHIN 55
Query: 135 RMNNGAVDSXEXXLHPV 85
M++G E LHPV
Sbjct: 54 WMDHGTTGLTEKCLHPV 4
>gb|BG558740.1|BG558740 RHIZ2_59_H07.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 501
Score = 240 bits (518), Expect = 2e-062
Identities = 101/139 (72%), Positives = 113/139 (81%)
Frame = +1 / +2
Query: 73 GTPSYWMQTXFRRVNRAIVHPVNIXXXXXXXXXXXXITWQDAENSFLRVKVVNFGSDTVN 252
GTPSYWMQT FR + A++HP I ITWQD+ENSFLRVKV+NFGSD V
Sbjct: 2 GTPSYWMQTLFRESSGAMLHPTTISSSYSGSLAASAITWQDSENSFLRVKVINFGSDAVT 181
Query: 253 LTVSTSGLGASVNALGSTATVLTSGNVMDENSFSNPNKVAPVKSQLSNAAEQMQVTLAPH 432
LT+STSGL AS+NALGSTATVLTS NVMDENSFSNP KV PVKS +SNAAEQMQVTLAPH
Sbjct: 182 LTISTSGLQASINALGSTATVLTSANVMDENSFSNPTKVVPVKSDMSNAAEQMQVTLAPH 361
Query: 433 SFTAFDLALAEPKLVAEI* 489
SF++FDLALA+ KLVAE+*
Sbjct: 362 SFSSFDLALAQSKLVAEM* 418
Score = 215 bits (465), Expect = 5e-055
Identities = 104/139 (74%), Positives = 110/139 (79%)
Frame = -2 / -1
Query: 488 HISATSLGSASARSKAVKE*GASVTCICSAALLSWLFTGATLFGLLKEFSSMTLPDVRTV 309
HISATSL A ARS +KE*GA+VTCICSAALL LFTG TL GLLKEFSS+T DVRTV
Sbjct: 417 HISATSLD*ARARSNELKE*GANVTCICSAALLISLFTGTTLVGLLKEFSSITFADVRTV 238
Query: 308 AVDPSALTLAPSPLVETVRLTVSDPKFTTFTLRKLFSASCHVIADAASELEYRELILTG* 129
AVDP AL LA SPLVE VR+T SDPKF TFTLRKLFS SC VIADAASE E ELI+ G
Sbjct: 237 AVDPRALILAWSPLVEIVRVTASDPKFMTFTLRKLFSESCQVIADAASEPE*LELIVVGC 58
Query: 128 TMARLTLRKXVCIQ*LGVP 72
+A L RK VCIQ*LGVP
Sbjct: 57 NIAPLDSRKSVCIQ*LGVP 1
Score = 162 bits (349), Expect = 5e-039
Identities = 74/139 (53%), Positives = 95/139 (68%)
Frame = -1 / -3
Query: 492 TSYLRHKLGLSQRQIEGGEGVRSQRDLHLLRGVAQLAFHRRNLVRVTEGVLVHDVARRED 313
+S+L K GLSQ +IE EGVRSQRDLHLL +A +A HR NL VTEG+ +H V E+
Sbjct: 421 SSHLGDKFGLSQGEIERAEGVRSQRDLHLLCSIAHIALHRHNLGWVTEGIFIHHVC*CEN 242
Query: 312 GGG*SQRVDAGPESARGDREVNGVRPEVHDLHSQEAILCILPRDRRRGQRTRVPGTDINR 133
GG*SQ VD G ES RGD + + + P+V+DL+S+EA+L +LP +RRR +RTRV G D +
Sbjct: 241 SGG*SQSVDTGLESTRGDCQGHSI*PKVYDLYSKEAVL*VLPSNRRRCERTRVAGADCSW 62
Query: 132 MNNGAVDSXEXXLHPVARS 76
M + E LHPV RS
Sbjct: 61 M*HSTTRLAEKRLHPVTRS 5
Score = 154 bits (330), Expect = 2e-036
Identities = 78/139 (56%), Positives = 89/139 (64%)
Frame = +2 / +3
Query: 77 LLATGCRXFSXESTAPLFIRLISVPGTRVRWPRLRSRGRMQRIAS*E*RS*TSGRTPLTS 256
LL TGCR FS +I+L S P T VR RLR GR QR AS E*RS*T G+
Sbjct: 6 LLVTGCRRFSASLVVLCYIQLQSAPATLVRSQRLRLLGRTQRTASLE*RS*TLGQML*P* 185
Query: 257 RSPRADSGPASTRWDQPPPSSRLATSWTRTPSVTRTRLRR*KAS*ATPRSRCRSRWLLTP 436
+SPR DS P ST WDQPP S T W + PSVT+ RL R*+A *A +SRCRSRWLLTP
Sbjct: 186 QSPRVDSRPVSTLWDQPPLFSHQQT*WMKIPSVTQPRLCR*RAI*AMLQSRCRSRWLLTP 365
Query: 437 SPPSIWRWLSPSLWRRYDV 493
S SI WLSP+L R ++
Sbjct: 366 SARSISPWLSPNLSPRCEL 422
Score = 133 bits (286), Expect = 2e-030
Identities = 68/133 (51%), Positives = 82/133 (61%)
Frame = +3 / +1
Query: 90 DADXFPXSQPRHCSSG*YQFPVLEFAGRVCDHVAGCRE*LPESEGRELRVGHR*PHGLHE 269
DAD FP + +S Q +L FA VCD++AG RE LP S+G +L V P LHE
Sbjct: 19 DADAFPRV*WCYVTSNYNQLQLLWFARSVCDYLAGLREQLP*SKGHKLWVRCCDPDNLHE 198
Query: 270 RTRGQRQRAGINRHRPHVWQRHGRELLQ*PEQGCAGEKPAEQRRGADAGHAGSSLLHRLR 449
T GQ QR+GINRH H+ +R G + LQ*P QGCAGE+ EQ ADAGH GSSLL +R
Sbjct: 199 WTPGQYQRSGINRHCSHISKRDG*KFLQ*PNQGCAGEERYEQCCRADAGHVGSSLLQLVR 378
Query: 450 SGAG*AQACGGDM 488
S G Q C D+
Sbjct: 379 SRPGSVQTCRRDV 417
>gb|BI098064.1|BI098064 IP1_31_E11.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 478
Score = 234 bits (506), Expect = 1e-060
Identities = 106/126 (84%), Positives = 112/126 (88%)
Frame = -2 / -1
Query: 497 HTHHISATSLGSASARSKAVKE*GASVTCICSAALLSWLFTGATLFGLLKEFSSMTLPDV 318
H HISATSL ASA+S VKE*GA+VTCICS ALLSWLFTGATLFGLLKEFSS+TLP+V
Sbjct: 379 HIDHISATSLD*ASAKSNVVKE*GATVTCICSPALLSWLFTGATLFGLLKEFSSITLPNV 200
Query: 317 RTVAVDPSALTLAPSPLVETVRLTVSDPKFTTFTLRKLFSASCHVIADAASELEYRELIL 138
+TVAVDPS LTLA SPLVE VRLTVSDPKFTTFTLRKLFS SCHVIA+AASELEYRELIL
Sbjct: 199 KTVAVDPSELTLA*SPLVEIVRLTVSDPKFTTFTLRKLFSESCHVIANAASELEYRELIL 20
Query: 137 TG*TMA 120
G MA
Sbjct: 19 IGWIMA 2
Score = 225 bits (486), Expect = 6e-058
Identities = 95/126 (75%), Positives = 107/126 (84%)
Frame = +1 / +3
Query: 121 AIVHPVNIXXXXXXXXXXXXITWQDAENSFLRVKVVNFGSDTVNLTVSTSGLGASVNALG 300
A++HP+N+ ITWQD+ENSFLRVKVVNFGSDTV+LT+STSGL ASVN+LG
Sbjct: 3 AMIHPINMSSRYSSSLAAFAITWQDSENSFLRVKVVNFGSDTVSLTISTSGLQASVNSLG 182
Query: 301 STATVLTSGNVMDENSFSNPNKVAPVKSQLSNAAEQMQVTLAPHSFTAFDLALAEPKLVA 480
STATV T GNVMDENSFSNPNKVAPVKSQLSNA EQMQVT+APHSFT FDLALA+ KLVA
Sbjct: 183 STATVFTFGNVMDENSFSNPNKVAPVKSQLSNAGEQMQVTVAPHSFTTFDLALAQSKLVA 362
Query: 481 EI*CVC 498
E+* +C
Sbjct: 363 EM*SMC 380
Score = 189 bits (408), Expect = 4e-047
Identities = 88/127 (69%), Positives = 95/127 (74%)
Frame = +2 / +1
Query: 122 PLFIRLISVPGTRVRWPRLRSRGRMQRIAS*E*RS*TSGRTPLTSRSPRADSGPASTRWD 301
P I+LI VPGT+ R L+ RGR QRIAS E*R *T GRT L SR P+ D P STRWD
Sbjct: 4 P*SIQLI*VPGTQAR*LHLQLRGRTQRIASLE*RL*TLGRTLLASRFPQVDFRPVSTRWD 183
Query: 302 QPPPSSRLATSWTRTPSVTRTRLRR*KAS*ATPRSRCRSRWLLTPSPPSIWRWLSPSLWR 481
QPP S LAT W RT SVT+TRLRR*KAS*AT SRCRSRWLLTPSP IWRWLSPSLW+
Sbjct: 184 QPPLFSHLATLWMRTLSVTQTRLRR*KAS*ATLGSRCRSRWLLTPSPRLIWRWLSPSLWQ 363
Query: 482 RYDVCAA 502
R D C +
Sbjct: 364 RCDQCVS 384
Score = 187 bits (402), Expect = 2e-046
Identities = 82/126 (65%), Positives = 96/126 (76%)
Frame = +3 / +2
Query: 123 HCSSG*YQFPVLEFAGRVCDHVAGCRE*LPESEGRELRVGHR*PHGLHERTRGQRQRAGI 302
H S *Y+FPVL+ A +C++VAG RE*LP S+G +L VGH *PH H+ T GQ Q AGI
Sbjct: 5 HDPSN*YEFPVLKLASCICNYVAGLRE*LP*SKGCKLWVGHC*PHDFHKWTSGQCQLAGI 184
Query: 303 NRHRPHVWQRHGRELLQ*PEQGCAGEKPAEQRRGADAGHAGSSLLHRLRSGAG*AQACGG 482
NRH H+WQR+G EL Q*P+QGCAGEKPAEQR GADAGH GSSLLH + GAG QACG
Sbjct: 185 NRHCFHIWQRYG*ELFQ*PKQGCAGEKPAEQRWGADAGHGGSSLLHHV*FGAGSVQACGR 364
Query: 483 DMMCVL 500
D++ VL
Sbjct: 365 DVINVL 382
Score = 180 bits (387), Expect = 3e-044
Identities = 82/125 (65%), Positives = 100/125 (80%)
Frame = -1 / -3
Query: 495 HTSYLRHKLGLSQRQIEGGEGVRSQRDLHLLRGVAQLAFHRRNLVRVTEGVLVHDVARRE 316
H S+L HKLGLSQRQI+ GEGVRS RDLHLL VAQLAFHRRNLV VTE VL+H+VA+ E
Sbjct: 377 H*SHLCHKLGLSQRQIKRGEGVRSHRDLHLLPSVAQLAFHRRNLVWVTERVLIHNVAKCE 198
Query: 315 DGGG*SQRVDAGPESARGDREVNGVRPEVHDLHSQEAILCILPRDRRRGQRTRVPGTDIN 136
+ GG*SQRVD G +S G+RE N VRP+V++L+S+EAIL +LPR+ + R VPGT IN
Sbjct: 197 NSGG*SQRVDTGLKSTCGNREANSVRPKVYNLYSKEAIL*VLPRNCKCS*RA*VPGTHIN 18
Query: 135 RMNNG 121
M++G
Sbjct: 17 WMDHG 3
>gb|DN552508.1|DN552508 pSHR-RT-A-H1_H01_C100 pSHR Sorghum halepense cDNA, mRNA sequence
Length = 484
Score = 231 bits (499), Expect = 1e-059
Identities = 104/116 (89%), Positives = 105/116 (90%)
Frame = -2 / -3
Query: 497 HTHHISATSLGSASARSKAVKE*GASVTCICSAALLSWLFTGATLFGLLKEFSSMTLPDV 318
H HISATSL ASARS VKE*GASVTCICS ALLSWLFTGATLFGLLKEFSS+TLPDV
Sbjct: 353 HIDHISATSLD*ASARSNVVKE*GASVTCICSPALLSWLFTGATLFGLLKEFSSITLPDV 174
Query: 317 RTVAVDPSALTLAPSPLVETVRLTVSDPKFTTFTLRKLFSASCHVIADAASELEYR 150
RTVAVDPS LTLA SPLVE VRLTVSDPKFTTFTLRKLFS SCHVIADAASELEYR
Sbjct: 173 RTVAVDPSELTLA*SPLVEMVRLTVSDPKFTTFTLRKLFSESCHVIADAASELEYR 6
Score = 218 bits (470), Expect(2) = 2e-056
Identities = 94/106 (88%), Positives = 101/106 (95%)
Frame = +1 / +1
Query: 181 ITWQDAENSFLRVKVVNFGSDTVNLTVSTSGLGASVNALGSTATVLTSGNVMDENSFSNP 360
ITWQD+ENSFLRVKVVNFGSDTV+LT+STSGL ASVN+LGSTATVLTSGNVMDENSFSNP
Sbjct: 37 ITWQDSENSFLRVKVVNFGSDTVSLTISTSGLQASVNSLGSTATVLTSGNVMDENSFSNP 216
Query: 361 NKVAPVKSQLSNAAEQMQVTLAPHSFTAFDLALAEPKLVAEI*CVC 498
NKVAPVKSQLSNA EQMQVTLAPHSFT FDLALA+ KLVAE+* +C
Sbjct: 217 NKVAPVKSQLSNAGEQMQVTLAPHSFTTFDLALAQSKLVAEM*SMC 354
Score = 183 bits (395), Expect = 2e-045
Identities = 80/117 (68%), Positives = 93/117 (79%)
Frame = +3 / +3
Query: 150 PVLEFAGRVCDHVAGCRE*LPESEGRELRVGHR*PHGLHERTRGQRQRAGINRHRPHVWQ 329
PVL+ A +C++VAG RE*LP S+G +L VGH *PH LH+ T GQ Q A INRH H+WQ
Sbjct: 6 PVLKLASCICNYVAGLRE*LP*SKGCKLWVGHC*PHHLHKWTSGQCQLAWINRHCSHIWQ 185
Query: 330 RHGRELLQ*PEQGCAGEKPAEQRRGADAGHAGSSLLHRLRSGAG*AQACGGDMMCVL 500
R+G EL Q*P+QGCAGEKPAEQR GADAGHAGSSLLH +RSGAG QACG D++ VL
Sbjct: 186 RYG*ELFQ*PKQGCAGEKPAEQRWGADAGHAGSSLLHHVRSGAGSVQACGRDVINVL 356
Score = 176 bits (379), Expect = 4e-043
Identities = 82/117 (70%), Positives = 88/117 (75%)
Frame = +2 / +2
Query: 152 GTRVRWPRLRSRGRMQRIAS*E*RS*TSGRTPLTSRSPRADSGPASTRWDQPPPSSRLAT 331
GT+ R L+ RGR QRIAS E*R *T GRT L S SP+ D P STR DQPP S LAT
Sbjct: 8 GTQAR*LHLQLRGRTQRIASLE*RL*TLGRTLLASPSPQVDFRPVSTRLDQPPLFSHLAT 187
Query: 332 SWTRTPSVTRTRLRR*KAS*ATPRSRCRSRWLLTPSPPSIWRWLSPSLWRRYDVCAA 502
W RT SVT+TRLRR*KAS*AT SRCRSRWLLTPSP SIWRWLSPSLW+R D C +
Sbjct: 188 LWMRTLSVTQTRLRR*KAS*ATLGSRCRSRWLLTPSPRSIWRWLSPSLWQRCDQCVS 358
Score = 170 bits (366), Expect = 2e-041
Identities = 79/115 (68%), Positives = 92/115 (80%)
Frame = -1 / -2
Query: 495 HTSYLRHKLGLSQRQIEGGEGVRSQRDLHLLRGVAQLAFHRRNLVRVTEGVLVHDVARRE 316
H S+L HKLGLSQRQIE GEGVRSQRDLHLL VAQLAFHRRNLV VTE VL+H+VAR E
Sbjct: 351 H*SHLCHKLGLSQRQIERGEGVRSQRDLHLLPSVAQLAFHRRNLVWVTERVLIHNVARCE 172
Query: 315 DGGG*SQRVDAGPESARGDREVNGVRPEVHDLHSQEAILCILPRDRRRGQRTRVP 151
+ GG*S+RVD G +S GD E N VRP+V++L+S+EAIL +LPR+ R R VP
Sbjct: 171 NSGG*SKRVDTGLKSTCGDGEANSVRPKVYNLYSKEAIL*VLPRNCRCS*RA*VP 7
Score = 23.1 bits (44), Expect(2) = 2e-056
Identities = 8/26 (30%), Positives = 15/26 (57%)
Frame = +1 / +1
Query: 604 VPRYRITYYVLLLHEIKTTSGFCLVL 681
+PRYR Y + +++ +CL+L
Sbjct: 382 IPRYRYIYLLYYMNKNHIRFVWCLIL 459
>gb|BQ656040.1|BQ656040 pRC0338 Sorghum halepense rhizome cDNA library Sorghum halepense
cDNA clone pRC0338, mRNA sequence
Length = 487
Score = 220 bits (475), Expect = 2e-056
Identities = 94/133 (70%), Positives = 107/133 (80%)
Frame = +1 / +2
Query: 91 MQTXFRRVNRAIVHPVNIXXXXXXXXXXXXITWQDAENSFLRVKVVNFGSDTVNLTVSTS 270
MQT FR + A++HP I ITWQD+ENSFLRVKV+NFGSD V LT+ST+
Sbjct: 2 MQTLFRESSGAMLHPTTISSSYSGSLAASAITWQDSENSFLRVKVINFGSDAVTLTISTT 181
Query: 271 GLGASVNALGSTATVLTSGNVMDENSFSNPNKVAPVKSQLSNAAEQMQVTLAPHSFTAFD 450
GL AS+NALGSTATVLTS NVMDENSFSNP KV PVKS +SNAAEQMQVTLAPHSF++FD
Sbjct: 182 GLQASINALGSTATVLTSANVMDENSFSNPTKVVPVKSDMSNAAEQMQVTLAPHSFSSFD 361
Query: 451 LALAEPKLVAEI* 489
LALA+ KLVAE+*
Sbjct: 362 LALAQSKLVAEM* 400
Score = 202 bits (435), Expect = 7e-051
Identities = 97/133 (72%), Positives = 104/133 (78%)
Frame = -2 / -2
Query: 488 HISATSLGSASARSKAVKE*GASVTCICSAALLSWLFTGATLFGLLKEFSSMTLPDVRTV 309
HISATSL A ARS +KE*GA+VTCICSAALL LFTG TL GLLKEFSS+T DVRTV
Sbjct: 399 HISATSLD*ARARSNELKE*GANVTCICSAALLISLFTGTTLVGLLKEFSSITFADVRTV 220
Query: 308 AVDPSALTLAPSPLVETVRLTVSDPKFTTFTLRKLFSASCHVIADAASELEYRELILTG* 129
AVDP AL LA SP+VE VR+T SDPKF TFTLRKLFS SC VIADAASE E ELI+ G
Sbjct: 219 AVDPRALILAWSPVVEIVRVTASDPKFMTFTLRKLFSESCQVIADAASEPE*LELIVVGC 40
Query: 128 TMARLTLRKXVCI 90
+A L RK VCI
Sbjct: 39 NIAPLDSRKSVCI 1
Score = 149 bits (321), Expect = 4e-035
Identities = 69/134 (51%), Positives = 91/134 (67%)
Frame = -1 / -1
Query: 492 TSYLRHKLGLSQRQIEGGEGVRSQRDLHLLRGVAQLAFHRRNLVRVTEGVLVHDVARRED 313
+S+L K GLSQ +IE EGVRSQRDLHLL +A +A HR NL VTEG+ +H V E+
Sbjct: 403 SSHLGDKFGLSQGEIERAEGVRSQRDLHLLCSIAHIALHRHNLGWVTEGIFIHHVC*CEN 224
Query: 312 GGG*SQRVDAGPESARGDREVNGVRPEVHDLHSQEAILCILPRDRRRGQRTRVPGTDINR 133
GG*SQ VD G ES+RGD + + + P+V+DL+S+EA+L +LP +RRR + TRV G D +
Sbjct: 223 SGG*SQSVDTGLESSRGDCQGHSI*PKVYDLYSKEAVL*VLPSNRRRCE*TRVAGADCSW 44
Query: 132 MNNGAVDSXEXXLH 91
M + E LH
Sbjct: 43 M*HSTTRLTEKRLH 2
Score = 142 bits (304), Expect = 8e-033
Identities = 73/134 (54%), Positives = 84/134 (62%)
Frame = +2 / +3
Query: 92 CRXFSXESTAPLFIRLISVPGTRVRWPRLRSRGRMQRIAS*E*RS*TSGRTPLTSRSPRA 271
CR FS +I+L S P T V RLR GR QR AS E*RS*T G+ +SPR
Sbjct: 3 CRRFSVSLVVLCYIQLQSAPATLVHSQRLRLLGRTQRTASLE*RS*TLGQML*P*QSPRL 182
Query: 272 DSGPASTRWDQPPPSSRLATSWTRTPSVTRTRLRR*KAS*ATPRSRCRSRWLLTPSPPSI 451
DS P ST WDQPP S T W + PSVT+ RL R*+A *A +SRCRSRWLLTPS SI
Sbjct: 183 DSRPVSTLWDQPPLFSHQQT*WMKIPSVTQPRLCR*RAI*AMLQSRCRSRWLLTPSARSI 362
Query: 452 WRWLSPSLWRRYDV 493
WLSP+L R ++
Sbjct: 363 SPWLSPNLSPRCEL 404
Score = 123 bits (264), Expect = 3e-027
Identities = 60/115 (52%), Positives = 73/115 (63%)
Frame = +3 / +1
Query: 144 QFPVLEFAGRVCDHVAGCRE*LPESEGRELRVGHR*PHGLHERTRGQRQRAGINRHRPHV 323
Q +L F VCD++AG RE LP S+G +L V P LH+ T GQ QR+GINRH H+
Sbjct: 55 QLQLLWFTRSVCDYLAGLREQLP*SKGHKLWVRCCDPDNLHDWTPGQYQRSGINRHCSHI 234
Query: 324 WQRHGRELLQ*PEQGCAGEKPAEQRRGADAGHAGSSLLHRLRSGAG*AQACGGDM 488
+R G + LQ*P QGCAGE+ EQ ADAGH GSSLL +RS G Q C D+
Sbjct: 235 SKRDG*KFLQ*PNQGCAGEERYEQCCRADAGHVGSSLLQLVRSRPGSVQTCRRDV 399
>gb|BG556485.1|BG556485 EM1_37_G04.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 337
Score = 219 bits (473), Expect = 4e-056
Identities = 99/112 (88%), Positives = 100/112 (89%)
Frame = -2 / -2
Query: 416 TCICSAALLSWLFTGATLFGLLKEFSSMTLPDVRTVAVDPSALTLAPSPLVETVRLTVSD 237
TCICS ALLSWLFTGATLFGLLKEFSS+TLPDVRTVAVDPS LTLA SPLVE VRLTVSD
Sbjct: 336 TCICSPALLSWLFTGATLFGLLKEFSSITLPDVRTVAVDPSELTLA*SPLVEIVRLTVSD 157
Query: 236 PKFTTFTLRKLFSASCHVIADAASELEYRELILTG*TMARLTLRKXVCIQ*L 81
PKFTTFTLRKLFS SCHVIADAASELEYRELIL G MA L RK VCIQ*L
Sbjct: 156 PKFTTFTLRKLFSESCHVIADAASELEYRELILIGWIMAPLDSRKSVCIQ*L 1
Score = 204 bits (439), Expect = 2e-051
Identities = 85/112 (75%), Positives = 94/112 (83%)
Frame = +1 / +2
Query: 82 SYWMQTXFRRVNRAIVHPVNIXXXXXXXXXXXXITWQDAENSFLRVKVVNFGSDTVNLTV 261
SYWMQT FR + A++HP+N+ ITWQD+ENSFLRVKVVNFGSDTV+LT+
Sbjct: 2 SYWMQTLFRESSGAMIHPINMSSRYSSSLAASAITWQDSENSFLRVKVVNFGSDTVSLTI 181
Query: 262 STSGLGASVNALGSTATVLTSGNVMDENSFSNPNKVAPVKSQLSNAAEQMQV 417
STSGL ASVN+LGSTATVLTSGNVMDENSFSNPNKVAPVKSQLSNA EQMQV
Sbjct: 182 STSGLQASVNSLGSTATVLTSGNVMDENSFSNPNKVAPVKSQLSNAGEQMQV 337
Score = 163 bits (350), Expect = 4e-039
Identities = 72/109 (66%), Positives = 83/109 (76%)
Frame = +3 / +1
Query: 90 DADXFPXSQPRHCSSG*YQFPVLEFAGRVCDHVAGCRE*LPESEGRELRVGHR*PHGLHE 269
DAD FP Q H S *Y+FPVL+ A +C++VAG RE*LP S+G +L VGH *PH LH+
Sbjct: 10 DADTFP*VQWCHDPSN*YEFPVLKLASCICNYVAGLRE*LP*SKGCKLWVGHC*PHDLHK 189
Query: 270 RTRGQRQRAGINRHRPHVWQRHGRELLQ*PEQGCAGEKPAEQRRGADAG 416
T GQ Q AGINRH H+WQR+G EL Q*P+QGCAGEKPAEQR GADAG
Sbjct: 190 WTSGQCQLAGINRHCSHIWQRYG*ELFQ*PKQGCAGEKPAEQRWGADAG 336
Score = 151 bits (325), Expect = 1e-035
Identities = 70/111 (63%), Positives = 83/111 (74%)
Frame = -1 / -1
Query: 417 DLHLLRGVAQLAFHRRNLVRVTEGVLVHDVARREDGGG*SQRVDAGPESARGDREVNGVR 238
DLHLL VAQLAFHRRNLV VTE VL+H+VAR E+ GG*SQRVD G +S GDRE N VR
Sbjct: 337 DLHLLPSVAQLAFHRRNLVWVTERVLIHNVARCENSGG*SQRVDTGLKSTCGDREANSVR 158
Query: 237 PEVHDLHSQEAILCILPRDRRRGQRTRVPGTDINRMNNGAVDSXEXXLHPV 85
P+V++L+S+EAIL +LPR+ R R VPGT IN M++G E LHPV
Sbjct: 157 PKVYNLYSKEAIL*VLPRNCRCS*RA*VPGTHINWMDHGTTGLTEKCLHPV 5
Score = 147 bits (316), Expect = 2e-034
Identities = 73/110 (66%), Positives = 78/110 (70%)
Frame = +2 / +3
Query: 86 TGCRXFSXESTAPLFIRLISVPGTRVRWPRLRSRGRMQRIAS*E*RS*TSGRTPLTSRSP 265
TGCR FS P I+LI VPGT+ R L+ RGR QRIAS E*R *T GRT L SRSP
Sbjct: 6 TGCRHFSVSPVVP*SIQLI*VPGTQAR*LHLQLRGRTQRIASLE*RL*TLGRTLLASRSP 185
Query: 266 RADSGPASTRWDQPPPSSRLATSWTRTPSVTRTRLRR*KAS*ATPRSRCR 415
+ D P STRWDQPP S LAT W RT SVT+TRLRR*KAS*AT SRCR
Sbjct: 186 QVDFRPVSTRWDQPPLFSHLATLWMRTLSVTQTRLRR*KAS*ATLGSRCR 335
>gb|CW391258.1|CW391258 fsbb001f077f01f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f077f01, DNA
sequence
Length = 660
Score = 107 bits (228), Expect(3) = 2e-053
Identities = 46/51 (90%), Positives = 50/51 (98%)
Frame = +1 / +3
Query: 217 VKVVNFGSDTVNLTVSTSGLGASVNALGSTATVLTSGNVMDENSFSNPNKV 369
V+VVNFGSDTV+LT+STSGL ASVN+LGSTATVLTSGNVMDENSFSNPNKV
Sbjct: 210 VQVVNFGSDTVSLTISTSGLQASVNSLGSTATVLTSGNVMDENSFSNPNKV 362
Score = 102 bits (217), Expect(3) = 2e-055
Identities = 46/51 (90%), Positives = 47/51 (92%)
Frame = -2 / -3
Query: 368 TLFGLLKEFSSMTLPDVRTVAVDPSALTLAPSPLVETVRLTVSDPKFTTFT 216
TLFGLLKEFSS+TLPDVRTVAVDPS LTLA SPLVE VRLTVSDPKFTT T
Sbjct: 361 TLFGLLKEFSSITLPDVRTVAVDPSELTLA*SPLVEIVRLTVSDPKFTTCT 209
Score = 93.2 bits (197), Expect(3) = 2e-053
Identities = 38/46 (82%), Positives = 40/46 (86%)
Frame = +2 / +1
Query: 365 RLRR*KAS*ATPRSRCRSRWLLTPSPPSIWRWLSPSLWRRYDVCAA 502
RLRR*KAS*AT SRCRSRWLLTPSP SIWRWLSPSLW+R D C +
Sbjct: 478 RLRR*KAS*ATLGSRCRSRWLLTPSPRSIWRWLSPSLWQRCDQCVS 615
Score = 86.8 bits (183), Expect(3) = 5e-042
Identities = 36/45 (80%), Positives = 39/45 (86%)
Frame = +3 / +2
Query: 366 GCAGEKPAEQRRGADAGHAGSSLLHRLRSGAG*AQACGGDMMCVL 500
GCAGEKPAEQR GADAGHAGSSLLH +RSGAG QACG D++ VL
Sbjct: 479 GCAGEKPAEQRWGADAGHAGSSLLHHVRSGAGSVQACGRDVINVL 613
Score = 86.8 bits (183), Expect(3) = 2e-055
Identities = 38/44 (86%), Positives = 39/44 (88%)
Frame = -1 / -2
Query: 495 HTSYLRHKLGLSQRQIEGGEGVRSQRDLHLLRGVAQLAFHRRNL 364
H S+L HKLGLSQRQIE GEGVRSQRDLHLL VAQLAFHRRNL
Sbjct: 608 H*SHLCHKLGLSQRQIERGEGVRSQRDLHLLPSVAQLAFHRRNL 477
Score = 85.8 bits (181), Expect(3) = 3e-038
Identities = 37/45 (82%), Positives = 41/45 (91%)
Frame = +1 / +3
Query: 364 KVAPVKSQLSNAAEQMQVTLAPHSFTAFDLALAEPKLVAEI*CVC 498
+VAPVKSQLSNA EQMQVTLAPHSFT FDLALA+ KLVAE+* +C
Sbjct: 477 QVAPVKSQLSNAGEQMQVTLAPHSFTTFDLALAQSKLVAEM*SMC 611
Score = 83.1 bits (175), Expect(3) = 2e-038
Identities = 37/44 (84%), Positives = 37/44 (84%)
Frame = -2 / -3
Query: 497 HTHHISATSLGSASARSKAVKE*GASVTCICSAALLSWLFTGAT 366
H HISATSL ASARS VKE*GASVTCICS ALLSWLFTGAT
Sbjct: 610 HIDHISATSLD*ASARSNVVKE*GASVTCICSPALLSWLFTGAT 479
Score = 76.2 bits (160), Expect(3) = 2e-038
Identities = 33/51 (64%), Positives = 41/51 (80%)
Frame = -1 / -2
Query: 369 NLVRVTEGVLVHDVARREDGGG*SQRVDAGPESARGDREVNGVRPEVHDLH 217
+LV VTE VL+H+VAR E+ GG*SQRVD G +S GDRE N VRP+V++LH
Sbjct: 362 DLVWVTERVLIHNVARCENSGG*SQRVDTGLKSTCGDREANSVRPKVYNLH 210
Score = 75.8 bits (159), Expect(3) = 5e-042
Identities = 32/49 (65%), Positives = 37/49 (75%)
Frame = +3 / +2
Query: 222 GRELRVGHR*PHGLHERTRGQRQRAGINRHRPHVWQRHGRELLQ*PEQG 368
G +L VGH *PH LH+ T GQ Q AGINRH H+WQR+G EL Q*P+QG
Sbjct: 215 GCKLWVGHC*PHDLHKWTSGQCQLAGINRHCSHIWQRYG*ELFQ*PKQG 361
Score = 73.9 bits (155), Expect(3) = 3e-038
Identities = 33/49 (67%), Positives = 35/49 (71%)
Frame = +2 / +1
Query: 221 RS*TSGRTPLTSRSPRADSGPASTRWDQPPPSSRLATSWTRTPSVTRTR 367
R *T GRT L SRSP+ D P STRWDQPP S LAT W RT SVT+TR
Sbjct: 214 RL*TLGRTLLASRSPQVDFRPVSTRWDQPPLFSHLATLWMRTLSVTQTR 360
Score = 67.5 bits (141), Expect(3) = 2e-055
Identities = 30/34 (88%), Positives = 30/34 (88%)
Frame = -2 / -2
Query: 221 FTLRKLFSASCHVIADAASELEYRELILTG*TMA 120
FTLRKLFS SCHVIADAASELEYRELIL G MA
Sbjct: 104 FTLRKLFSESCHVIADAASELEYRELILIGWIMA 3
Score = 49.2 bits (101), Expect(3) = 2e-053
Identities = 17/34 (50%), Positives = 22/34 (64%)
Frame = +1 / +1
Query: 121 AIVHPVNIXXXXXXXXXXXXITWQDAENSFLRVK 222
A++HP+N+ ITWQD+ENSFLRVK
Sbjct: 4 AMIHPINMSSRYSSSLAASAITWQDSENSFLRVK 105
Score = 48.7 bits (100), Expect(3) = 5e-042
Identities = 20/35 (57%), Positives = 27/35 (77%)
Frame = +3 / +3
Query: 123 HCSSG*YQFPVLEFAGRVCDHVAGCRE*LPESEGR 227
H S *Y+FPVL+ A +C++VAG RE*LP S+G+
Sbjct: 6 HDPSN*YEFPVLKLASCICNYVAGLRE*LP*SKGK 110
Score = 40.0 bits (81), Expect(3) = 2e-038
Identities = 19/34 (55%), Positives = 25/34 (73%)
Frame = -1 / -1
Query: 222 LHSQEAILCILPRDRRRGQRTRVPGTDINRMNNG 121
L+S+EAIL +LPR+ R R VPGT IN M++G
Sbjct: 105 LYSKEAIL*VLPRNCRCS*RA*VPGTHINWMDHG 4
Score = 38.6 bits (78), Expect(3) = 3e-038
Identities = 21/34 (61%), Positives = 24/34 (70%)
Frame = +2 / +2
Query: 122 PLFIRLISVPGTRVRWPRLRSRGRMQRIAS*E*R 223
P I+LI VPGT+ R L+ RGR QRIAS E*R
Sbjct: 5 P*SIQLI*VPGTQAR*LHLQLRGRTQRIASLE*R 106
>gb|CW203727.1|CW203727 104_631_11186168_148_36906_024 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11186168, DNA
sequence
Length = 663
Score = 107 bits (228), Expect(3) = 3e-052
Identities = 46/51 (90%), Positives = 50/51 (98%)
Frame = +1 / +2
Query: 217 VKVVNFGSDTVNLTVSTSGLGASVNALGSTATVLTSGNVMDENSFSNPNKV 369
V+VVNFGSDTV+LT+STSGL ASVN+LGSTATVLTSGNVMDENSFSNPNKV
Sbjct: 194 VQVVNFGSDTVSLTISTSGLQASVNSLGSTATVLTSGNVMDENSFSNPNKV 346
Score = 102 bits (217), Expect(3) = 3e-054
Identities = 46/51 (90%), Positives = 47/51 (92%)
Frame = -2 / -1
Query: 368 TLFGLLKEFSSMTLPDVRTVAVDPSALTLAPSPLVETVRLTVSDPKFTTFT 216
TLFGLLKEFSS+TLPDVRTVAVDPS LTLA SPLVE VRLTVSDPKFTT T
Sbjct: 345 TLFGLLKEFSSITLPDVRTVAVDPSELTLA*SPLVEIVRLTVSDPKFTTCT 193
Score = 93.2 bits (197), Expect(3) = 3e-052
Identities = 38/46 (82%), Positives = 40/46 (86%)
Frame = +2 / +3
Query: 365 RLRR*KAS*ATPRSRCRSRWLLTPSPPSIWRWLSPSLWRRYDVCAA 502
RLRR*KAS*AT SRCRSRWLLTPSP SIWRWLSPSLW+R D C +
Sbjct: 462 RLRR*KAS*ATLGSRCRSRWLLTPSPRSIWRWLSPSLWQRCDQCVS 599
Score = 86.8 bits (183), Expect(3) = 4e-039
Identities = 36/45 (80%), Positives = 39/45 (86%)
Frame = +3 / +1
Query: 366 GCAGEKPAEQRRGADAGHAGSSLLHRLRSGAG*AQACGGDMMCVL 500
GCAGEKPAEQR GADAGHAGSSLLH +RSGAG QACG D++ VL
Sbjct: 463 GCAGEKPAEQRWGADAGHAGSSLLHHVRSGAGSVQACGRDVINVL 597
Score = 86.8 bits (183), Expect(3) = 3e-054
Identities = 38/44 (86%), Positives = 39/44 (88%)
Frame = -1 / -3
Query: 495 HTSYLRHKLGLSQRQIEGGEGVRSQRDLHLLRGVAQLAFHRRNL 364
H S+L HKLGLSQRQIE GEGVRSQRDLHLL VAQLAFHRRNL
Sbjct: 592 H*SHLCHKLGLSQRQIERGEGVRSQRDLHLLPSVAQLAFHRRNL 461
Score = 85.8 bits (181), Expect(3) = 1e-037
Identities = 37/45 (82%), Positives = 41/45 (91%)
Frame = +1 / +2
Query: 364 KVAPVKSQLSNAAEQMQVTLAPHSFTAFDLALAEPKLVAEI*CVC 498
+VAPVKSQLSNA EQMQVTLAPHSFT FDLALA+ KLVAE+* +C
Sbjct: 461 QVAPVKSQLSNAGEQMQVTLAPHSFTTFDLALAQSKLVAEM*SMC 595
Score = 83.1 bits (175), Expect(3) = 3e-037
Identities = 37/44 (84%), Positives = 37/44 (84%)
Frame = -2 / -1
Query: 497 HTHHISATSLGSASARSKAVKE*GASVTCICSAALLSWLFTGAT 366
H HISATSL ASARS VKE*GASVTCICS ALLSWLFTGAT
Sbjct: 594 HIDHISATSLD*ASARSNVVKE*GASVTCICSPALLSWLFTGAT 463
Score = 76.2 bits (160), Expect(3) = 3e-037
Identities = 33/51 (64%), Positives = 41/51 (80%)
Frame = -1 / -3
Query: 369 NLVRVTEGVLVHDVARREDGGG*SQRVDAGPESARGDREVNGVRPEVHDLH 217
+LV VTE VL+H+VAR E+ GG*SQRVD G +S GDRE N VRP+V++LH
Sbjct: 346 DLVWVTERVLIHNVARCENSGG*SQRVDTGLKSTCGDREANSVRPKVYNLH 194
Score = 75.8 bits (159), Expect(3) = 4e-039
Identities = 32/49 (65%), Positives = 37/49 (75%)
Frame = +3 / +1
Query: 222 GRELRVGHR*PHGLHERTRGQRQRAGINRHRPHVWQRHGRELLQ*PEQG 368
G +L VGH *PH LH+ T GQ Q AGINRH H+WQR+G EL Q*P+QG
Sbjct: 199 GCKLWVGHC*PHDLHKWTSGQCQLAGINRHCSHIWQRYG*ELFQ*PKQG 345
Score = 73.9 bits (155), Expect(3) = 1e-037
Identities = 33/49 (67%), Positives = 35/49 (71%)
Frame = +2 / +3
Query: 221 RS*TSGRTPLTSRSPRADSGPASTRWDQPPPSSRLATSWTRTPSVTRTR 367
R *T GRT L SRSP+ D P STRWDQPP S LAT W RT SVT+TR
Sbjct: 198 RL*TLGRTLLASRSPQVDFRPVSTRWDQPPLFSHLATLWMRTLSVTQTR 344
Score = 63.4 bits (132), Expect(3) = 3e-054
Identities = 27/28 (96%), Positives = 27/28 (96%)
Frame = -2 / -3
Query: 221 FTLRKLFSASCHVIADAASELEYRELIL 138
FTLRKLFS SCHVIADAASELEYRELIL
Sbjct: 88 FTLRKLFSESCHVIADAASELEYRELIL 5
Score = 45.1 bits (92), Expect(3) = 3e-052
Identities = 18/30 (60%), Positives = 25/30 (83%)
Frame = +3 / +2
Query: 138 *YQFPVLEFAGRVCDHVAGCRE*LPESEGR 227
*Y+FPVL+ A +C++VAG RE*LP S+G+
Sbjct: 5 *YEFPVLKLASCICNYVAGLRE*LP*SKGK 94
Score = 38.6 bits (78), Expect(3) = 4e-039
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = +1 / +3
Query: 136 VNIXXXXXXXXXXXXITWQDAENSFLRVK 222
+N+ ITWQD+ENSFLRVK
Sbjct: 3 INMSSRYSSSLAASAITWQDSENSFLRVK 89
Score = 36.3 bits (73), Expect(3) = 1e-037
Identities = 19/30 (63%), Positives = 22/30 (73%)
Frame = +2 / +1
Query: 134 RLISVPGTRVRWPRLRSRGRMQRIAS*E*R 223
+LI VPGT+ R L+ RGR QRIAS E*R
Sbjct: 1 QLI*VPGTQAR*LHLQLRGRTQRIASLE*R 90
Score = 35.4 bits (71), Expect(3) = 3e-037
Identities = 17/29 (58%), Positives = 21/29 (72%)
Frame = -1 / -2
Query: 222 LHSQEAILCILPRDRRRGQRTRVPGTDIN 136
L+S+EAIL +LPR+ R R VPGT IN
Sbjct: 89 LYSKEAIL*VLPRNCRCS*RA*VPGTHIN 3
>gb|BF586222.1|BF586222 FM1_27_C04.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 404
Score = 195 bits (420), Expect = 8e-049
Identities = 85/97 (87%), Positives = 92/97 (94%)
Frame = +1 / -2
Query: 208 FLRVKVVNFGSDTVNLTVSTSGLGASVNALGSTATVLTSGNVMDENSFSNPNKVAPVKSQ 387
FLRVKVVNFGSDTV+LT+STSGL ASVN+LGSTATVLTSGNVMDENSFSNPNKVAPVKSQ
Sbjct: 403 FLRVKVVNFGSDTVSLTISTSGLQASVNSLGSTATVLTSGNVMDENSFSNPNKVAPVKSQ 224
Query: 388 LSNAAEQMQVTLAPHSFTAFDLALAEPKLVAEI*CVC 498
LSNA EQMQVTLAPHSFT FDLALA+ KLVA++* +C
Sbjct: 223 LSNAGEQMQVTLAPHSFTTFDLALAQSKLVAQM*SMC 113
Score = 188 bits (404), Expect = 1e-046
Identities = 85/97 (87%), Positives = 86/97 (88%)
Frame = -2 / +3
Query: 497 HTHHISATSLGSASARSKAVKE*GASVTCICSAALLSWLFTGATLFGLLKEFSSMTLPDV 318
H HI ATSL ASARS VKE*GASVTCICS ALLSWLFTGATLFGLLKEFSS+TLPDV
Sbjct: 114 HIDHICATSLD*ASARSNVVKE*GASVTCICSPALLSWLFTGATLFGLLKEFSSITLPDV 293
Query: 317 RTVAVDPSALTLAPSPLVETVRLTVSDPKFTTFTLRK 207
RTVAVDPS LTLA SPLVE VRLTVSDPKFTTFTLRK
Sbjct: 294 RTVAVDPSELTLA*SPLVEIVRLTVSDPKFTTFTLRK 404
Score = 156 bits (336), Expect = 3e-037
Identities = 68/98 (69%), Positives = 77/98 (78%)
Frame = +3 / -1
Query: 207 LPESEGRELRVGHR*PHGLHERTRGQRQRAGINRHRPHVWQRHGRELLQ*PEQGCAGEKP 386
LP S+G +L VGH *PH LH+ T GQ Q A INRH H+WQR+G EL Q*P+QGCAGEKP
Sbjct: 404 LP*SKGCKLWVGHC*PHDLHKWTSGQCQLAWINRHCSHIWQRYG*ELFQ*PKQGCAGEKP 225
Query: 387 AEQRRGADAGHAGSSLLHRLRSGAG*AQACGGDMMCVL 500
AEQR GADAGH GSSLLH +RSGAG QACG D++ VL
Sbjct: 224 AEQRWGADAGHTGSSLLHHVRSGAGSVQACGTDVINVL 111
Score = 155 bits (334), Expect = 6e-037
Identities = 70/96 (72%), Positives = 73/96 (76%)
Frame = +2 / -3
Query: 215 E*RS*TSGRTPLTSRSPRADSGPASTRWDQPPPSSRLATSWTRTPSVTRTRLRR*KAS*A 394
E*R *T GRT L SRSP+ D P STR DQPP S LAT W RT SVT+TRLRR*KAS*A
Sbjct: 396 E*RL*TLGRTLLASRSPQVDFRPVSTRLDQPPLFSHLATLWMRTLSVTQTRLRR*KAS*A 217
Query: 395 TPRSRCRSRWLLTPSPPSIWRWLSPSLWRRYDVCAA 502
T SRCRS WLLTPSP SIWRWLSPSLW R D C +
Sbjct: 216 TLGSRCRSHWLLTPSPRSIWRWLSPSLWHRCDQCVS 109
Score = 154 bits (330), Expect = 2e-036
Identities = 69/96 (71%), Positives = 80/96 (83%)
Frame = -1 / +2
Query: 495 HTSYLRHKLGLSQRQIEGGEGVRSQRDLHLLRGVAQLAFHRRNLVRVTEGVLVHDVARRE 316
H S+L HKLGLSQRQIE GEGVRSQ DLHLL VAQLAFHRRNLV VTE VL+H+VAR E
Sbjct: 116 H*SHLCHKLGLSQRQIERGEGVRSQCDLHLLPSVAQLAFHRRNLVWVTERVLIHNVARCE 295
Query: 315 DGGG*SQRVDAGPESARGDREVNGVRPEVHDLHSQE 208
+ GG*S+RVD G +S GDRE N VRP+V++L+S+E
Sbjct: 296 NSGG*SKRVDTGLKSTCGDREANSVRPKVYNLYSKE 403
>gb|CF431297.1|CF431297 NIT1_5_G04.b1_A002 Nitrogen-deficient seedlings Sorghum bicolor
cDNA clone NIT1_5_G04_A002 3', mRNA sequence
Length = 503
Score = 191 bits (411), Expect = 1e-047
Identities = 82/100 (82%), Positives = 92/100 (92%)
Frame = +1 / +3
Query: 190 QDAENSFLRVKVVNFGSDTVNLTVSTSGLGASVNALGSTATVLTSGNVMDENSFSNPNKV 369
QD+ENSFLRVKV+NFGSD V LT+ST+GL AS+NALGSTATVLTS NVMDENSFSNP KV
Sbjct: 3 QDSENSFLRVKVINFGSDAVTLTISTTGLQASINALGSTATVLTSANVMDENSFSNPTKV 182
Query: 370 APVKSQLSNAAEQMQVTLAPHSFTAFDLALAEPKLVAEI* 489
PVKS +SNAAEQMQVTLAPHSF++FDLALA+ KLVAE+*
Sbjct: 183 VPVKSDMSNAAEQMQVTLAPHSFSSFDLALAQSKLVAEM* 302
Score = 166 bits (357), Expect = 4e-040
Identities = 77/100 (77%), Positives = 82/100 (82%)
Frame = -2 / -2
Query: 488 HISATSLGSASARSKAVKE*GASVTCICSAALLSWLFTGATLFGLLKEFSSMTLPDVRTV 309
HISATSL A ARS +KE*GA+VTCICSAALL LFTG TL GLLKEFSS+T DVRTV
Sbjct: 301 HISATSLD*ARARSNELKE*GANVTCICSAALLISLFTGTTLVGLLKEFSSITFADVRTV 122
Query: 308 AVDPSALTLAPSPLVETVRLTVSDPKFTTFTLRKLFSASC 189
AVDP AL LA SP+VE VR+T SDPKF TFTLRKLFS SC
Sbjct: 121 AVDPRALILAWSPVVEIVRVTASDPKFMTFTLRKLFSESC 2
Score = 126 bits (269), Expect = 5e-028
Identities = 56/101 (55%), Positives = 74/101 (73%)
Frame = -1 / -1
Query: 492 TSYLRHKLGLSQRQIEGGEGVRSQRDLHLLRGVAQLAFHRRNLVRVTEGVLVHDVARRED 313
+S+L K GLSQ +IE EGVRSQRDLHLL +A +A HR NL VTEG+ +H V E+
Sbjct: 305 SSHLGDKFGLSQGEIERAEGVRSQRDLHLLCSIAHIALHRHNLGWVTEGIFIHHVC*CEN 126
Query: 312 GGG*SQRVDAGPESARGDREVNGVRPEVHDLHSQEAILCIL 190
GG*SQ VD G ES+RGD + + + P+V+DL+S+EA+L +L
Sbjct: 125 SGG*SQSVDTGLESSRGDCQGHSI*PKVYDLYSKEAVL*VL 3
Score = 119 bits (255), Expect = 5e-026
Identities = 60/102 (58%), Positives = 69/102 (67%)
Frame = +2 / +1
Query: 188 GRMQRIAS*E*RS*TSGRTPLTSRSPRADSGPASTRWDQPPPSSRLATSWTRTPSVTRTR 367
GR QR AS E*RS*T G+ +SPR DS P ST WDQPP S T W + PSVT+ R
Sbjct: 1 GRTQRTASLE*RS*TLGQML*P*QSPRLDSRPVSTLWDQPPLFSHQQT*WMKIPSVTQPR 180
Query: 368 LRR*KAS*ATPRSRCRSRWLLTPSPPSIWRWLSPSLWRRYDV 493
L R*+A *A +SRCRSRWLLTPS SI WLSP+L R ++
Sbjct: 181 LCR*RAI*AMLQSRCRSRWLLTPSARSISPWLSPNLSPRCEL 306
Score = 109 bits (233), Expect = 5e-023
Identities = 54/100 (54%), Positives = 64/100 (64%)
Frame = +3 / +2
Query: 189 AGCRE*LPESEGRELRVGHR*PHGLHERTRGQRQRAGINRHRPHVWQRHGRELLQ*PEQG 368
AG RE LP S+G +L V P LH+ T GQ QR+GINRH H+ +R G + LQ*P QG
Sbjct: 2 AGLREQLP*SKGHKLWVRCCDPDNLHDWTPGQYQRSGINRHCSHISKRDG*KFLQ*PNQG 181
Query: 369 CAGEKPAEQRRGADAGHAGSSLLHRLRSGAG*AQACGGDM 488
CAGE+ EQ ADAGH GSSLL +RS G Q C D+
Sbjct: 182 CAGEERYEQCCRADAGHVGSSLLQLVRSRPGSVQTCRRDV 301
>gb|BG273345.1|BG273345 OV2_27_C04.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 464
Score = 185 bits (399), Expect = 6e-046
Identities = 80/97 (82%), Positives = 89/97 (91%)
Frame = +1 / +3
Query: 199 ENSFLRVKVVNFGSDTVNLTVSTSGLGASVNALGSTATVLTSGNVMDENSFSNPNKVAPV 378
ENSFLRVKV+NFGSD V LT+ST+GL AS+NALGSTATVLTS NVMDENSFSNP KV PV
Sbjct: 3 ENSFLRVKVINFGSDAVTLTISTTGLQASINALGSTATVLTSANVMDENSFSNPTKVVPV 182
Query: 379 KSQLSNAAEQMQVTLAPHSFTAFDLALAEPKLVAEI* 489
KS +SNAAEQMQVTLAPHSF++FDLALA+ KLVAE+*
Sbjct: 183 KSDMSNAAEQMQVTLAPHSFSSFDLALAQSKLVAEM* 293
Score = 160 bits (345), Expect = 2e-038
Identities = 75/97 (77%), Positives = 80/97 (82%)
Frame = -2 / -2
Query: 488 HISATSLGSASARSKAVKE*GASVTCICSAALLSWLFTGATLFGLLKEFSSMTLPDVRTV 309
HISATSL A ARS +KE*GA+VTCICSAALL LFTG TL GLLKEFSS+T DVRTV
Sbjct: 292 HISATSLD*ARARSNELKE*GANVTCICSAALLISLFTGTTLVGLLKEFSSITFADVRTV 113
Query: 308 AVDPSALTLAPSPLVETVRLTVSDPKFTTFTLRKLFS 198
AVDP AL LA SP+VE VR+T SDPKF TFTLRKLFS
Sbjct: 112 AVDPRALILAWSPVVEIVRVTASDPKFMTFTLRKLFS 2
Score = 124 bits (266), Expect = 1e-027
Identities = 55/98 (56%), Positives = 72/98 (73%)
Frame = -1 / -1
Query: 492 TSYLRHKLGLSQRQIEGGEGVRSQRDLHLLRGVAQLAFHRRNLVRVTEGVLVHDVARRED 313
+S+L K GLSQ +IE EGVRSQRDLHLL +A +A HR NL VTEG+ +H V E+
Sbjct: 296 SSHLGDKFGLSQGEIERAEGVRSQRDLHLLCSIAHIALHRHNLGWVTEGIFIHHVC*CEN 117
Query: 312 GGG*SQRVDAGPESARGDREVNGVRPEVHDLHSQEAIL 199
GG*SQ VD G ES+RGD + + + P+V+DL+S+EA+L
Sbjct: 116 SGG*SQSVDTGLESSRGDCQGHSI*PKVYDLYSKEAVL 3
Score = 115 bits (245), Expect = 1e-024
Identities = 58/99 (58%), Positives = 67/99 (67%)
Frame = +2 / +1
Query: 197 QRIAS*E*RS*TSGRTPLTSRSPRADSGPASTRWDQPPPSSRLATSWTRTPSVTRTRLRR 376
QR AS E*RS*T G+ +SPR DS P ST WDQPP S T W + PSVT+ RL R
Sbjct: 1 QRTASLE*RS*TLGQML*P*QSPRLDSRPVSTLWDQPPLFSHQQT*WMKIPSVTQPRLCR 180
Query: 377 *KAS*ATPRSRCRSRWLLTPSPPSIWRWLSPSLWRRYDV 493
*+A *A +SRCRSRWLLTPS SI WLSP+L R ++
Sbjct: 181 *RAI*AMLQSRCRSRWLLTPSARSISPWLSPNLSPRCEL 297
Score = 105 bits (224), Expect = 9e-022
Identities = 52/97 (53%), Positives = 62/97 (63%)
Frame = +3 / +2
Query: 198 RE*LPESEGRELRVGHR*PHGLHERTRGQRQRAGINRHRPHVWQRHGRELLQ*PEQGCAG 377
RE LP S+G +L V P LH+ T GQ QR+GINRH H+ +R G + LQ*P QGCAG
Sbjct: 2 REQLP*SKGHKLWVRCCDPDNLHDWTPGQYQRSGINRHCSHISKRDG*KFLQ*PNQGCAG 181
Query: 378 EKPAEQRRGADAGHAGSSLLHRLRSGAG*AQACGGDM 488
E+ EQ ADAGH GSSLL +RS G Q C D+
Sbjct: 182 EERYEQCCRADAGHVGSSLLQLVRSRPGSVQTCRRDV 292
>gb|CN133913.1|CN133913 OX1_19_D01.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_19_D01_A002 3', mRNA sequence
Length = 715
Score = 110 bits (234), Expect(2) = 4e-045
Identities = 47/95 (49%), Positives = 63/95 (66%)
Frame = +1 / +1
Query: 202 NSFLRVKVVNFGSDTVNLTVSTSGLGASVNALGSTATVLTSGNVMDENSFSNPNKVAPVK 381
N++L++KVVNFGS VNL +S +GL A + GS TVLTSG + DENSF P+KV P
Sbjct: 247 NTYLKIKVVNFGSKAVNLNISVTGLEADIQTFGSLKTVLTSGWLRDENSFQQPDKVVPAA 426
Query: 382 SQLSNAAEQMQVTLAPHSFTAFDLALAEPKLVAEI 486
S ++NA +QM V L +S T+FDL L + V +
Sbjct: 427 SPITNAGKQMGVVLNSYSLTSFDLLLDSDQSVPPV 531
Score = 93.2 bits (197), Expect(2) = 4e-045
Identities = 35/75 (46%), Positives = 44/75 (58%)
Frame = +1 / +1
Query: 1 PLFVTDNDQTWNPDAIVFNSWQHYGTPSYWMQTXFRRVNRAIVHPVNIXXXXXXXXXXXX 180
PLFV DNDQ WNPDAIVFNSWQHYG P+YW+ F+ + A +HP I
Sbjct: 40 PLFVNDNDQRWNPDAIVFNSWQHYGCPNYWILHFFKDSSGAALHPSTIQLPNYDQLVTSA 219
Query: 181 ITWQDAENSFLRVKV 225
ITW + + +K+
Sbjct: 220 ITWNNPHDGNTYLKI 264
Score = 78.5 bits (165), Expect(2) = 1e-027
Identities = 41/92 (44%), Positives = 50/92 (54%)
Frame = -2 / -3
Query: 476 TSLGSASARSKAVKE*GASVTCICSAALLSWLFTGATLFGLLKEFSSMTLPDVRTVAVDP 297
T + RS V+E T IC AL+ L G TL G KEFSS + PDVRTV DP
Sbjct: 521 TDWSESKRRSNEVREYEFRTTPICLPALVIGLAAGTTLSGCWKEFSSRSQPDVRTVFKDP 342
Query: 296 SALTLAPSPLVETVRLTVSDPKFTTFTLRKLF 201
+ A +P+ + RLT PKFTTF R +F
Sbjct: 341 NV*ISASNPVTDIFRLTALLPKFTTFIFR*VF 246
Score = 66.1 bits (138), Expect(2) = 1e-027
Identities = 35/62 (56%), Positives = 40/62 (64%)
Frame = -2 / -3
Query: 188 HVIADAASELEYRELILTG*TMARLTLRKXVCIQ*LGVP*CCQELKTIASGFHVWSLSVT 9
HVIAD + + I+ G*+ A L K IQ* G P*CC ELKTIASGFH+ SLS T
Sbjct: 227 HVIADVTN*S*FGS*IVDG*SAAPLESLKKCRIQ*FGHP*CCHELKTIASGFHL*SLSFT 48
Query: 8 KS 3
KS
Sbjct: 47 KS 42
>gb|AW678004.1|AW678004 WS1_12_G12.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 394
Score = 182 bits (391), Expect(2) = 7e-045
Identities = 80/96 (83%), Positives = 87/96 (90%)
Frame = +1 / +3
Query: 211 LRVKVVNFGSDTVNLTVSTSGLGASVNALGSTATVLTSGNVMDENSFSNPNKVAPVKSQL 390
LRVKVVNFGSDTV+LT+S SGL ASVN+LGSTATV T GNVMDEN FSNPNKVAPVKSQL
Sbjct: 3 LRVKVVNFGSDTVSLTISPSGLQASVNSLGSTATVFTFGNVMDENFFSNPNKVAPVKSQL 182
Query: 391 SNAAEQMQVTLAPHSFTAFDLALAEPKLVAEI*CVC 498
SNA EQMQVTLAPHSFT FDLALA+ KLVA++* +C
Sbjct: 183 SNAGEQMQVTLAPHSFTTFDLALAQSKLVAKM*SMC 290
Score = 175 bits (376), Expect = 9e-043
Identities = 79/96 (82%), Positives = 84/96 (87%)
Frame = -2 / -1
Query: 497 HTHHISATSLGSASARSKAVKE*GASVTCICSAALLSWLFTGATLFGLLKEFSSMTLPDV 318
H HI ATSL ASA+S VKE*GASVTCICS ALLSWLFTGATLFGLLK+FSS+TLP+V
Sbjct: 289 HIDHIFATSLD*ASAKSNVVKE*GASVTCICSPALLSWLFTGATLFGLLKKFSSITLPNV 110
Query: 317 RTVAVDPSALTLAPSPLVETVRLTVSDPKFTTFTLR 210
+TVAVDPS LTLA SPL E VRLTVSDPKFTTFTLR
Sbjct: 109 KTVAVDPSELTLA*SPLGEIVRLTVSDPKFTTFTLR 2
Score = 158 bits (340), Expect = 8e-038
Identities = 69/96 (71%), Positives = 75/96 (78%)
Frame = +2 / +1
Query: 215 E*RS*TSGRTPLTSRSPRADSGPASTRWDQPPPSSRLATSWTRTPSVTRTRLRR*KAS*A 394
E*R *T GRT L SRSP+ D P STRWDQPP S LAT W RT SVT+TRLRR*KAS*A
Sbjct: 7 E*RL*TLGRTLLASRSPQVDFRPVSTRWDQPPLFSHLATLWMRTFSVTQTRLRR*KAS*A 186
Query: 395 TPRSRCRSRWLLTPSPPSIWRWLSPSLWRRYDVCAA 502
T S+CRSRWLLTPSP IWRWLSPSLW++ D C +
Sbjct: 187 TLGSKCRSRWLLTPSPRLIWRWLSPSLWQKCDQCVS 294
Score = 152 bits (326), Expect = 7e-036
Identities = 67/95 (70%), Positives = 79/95 (83%)
Frame = -1 / -3
Query: 495 HTSYLRHKLGLSQRQIEGGEGVRSQRDLHLLRGVAQLAFHRRNLVRVTEGVLVHDVARRE 316
H S+ HKLGLSQRQI+ GEGVRSQRDLHLL VAQLAFHRRNLV VTE VL+H+VA+ E
Sbjct: 287 H*SHFCHKLGLSQRQIKRGEGVRSQRDLHLLPSVAQLAFHRRNLVWVTEKVLIHNVAKCE 108
Query: 315 DGGG*SQRVDAGPESARGDREVNGVRPEVHDLHSQ 211
+ GG*SQRVD G +S GDRE N VRP+V++L+S+
Sbjct: 107 NSGG*SQRVDTGLKSTWGDREANSVRPKVYNLYSK 3
Score = 143 bits (306), Expect = 4e-033
Identities = 64/97 (65%), Positives = 75/97 (77%)
Frame = +3 / +2
Query: 210 PESEGRELRVGHR*PHGLHERTRGQRQRAGINRHRPHVWQRHGRELLQ*PEQGCAGEKPA 389
P S+G +L VGH *PH L + T GQ Q AGINRH H+WQR+G EL Q*P+QGCAGEKPA
Sbjct: 2 P*SKGCKLWVGHC*PHDLPKWTSGQCQLAGINRHCFHIWQRYG*ELFQ*PKQGCAGEKPA 181
Query: 390 EQRRGADAGHAGSSLLHRLRSGAG*AQACGGDMMCVL 500
EQR GA+AGHAGSSLLH + GAG QACG +++ VL
Sbjct: 182 EQRWGANAGHAGSSLLHHV*FGAGSVQACGKNVINVL 292
Score = 21.7 bits (41), Expect(2) = 7e-045
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = +3 / +3
Query: 648 NKNHIRFL 671
NKNHIRF+
Sbjct: 357 NKNHIRFV 380
>gb|CW316446.1|CW316446 104_807_11472898_148_35847_033 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11472898, DNA
sequence
Length = 646
Score = 127 bits (271), Expect(2) = 7e-045
Identities = 58/72 (80%), Positives = 60/72 (83%)
Frame = -2 / +2
Query: 221 FTLRKLFSASCHVIADAASELEYRELILTG*TMARLTLRKXVCIQ*LGVP*CCQELKTIA 42
FTLRKLFS SCHVIADAASELEYRELIL G MA L RK VCIQ*LGVP*CCQELKTIA
Sbjct: 221 FTLRKLFSESCHVIADAASELEYRELILIGWIMAPLDSRKSVCIQ*LGVP*CCQELKTIA 400
Query: 41 SGFHVWSLSVTK 6
SGFH+ L T+
Sbjct: 401 SGFHLIVLFKTQ 436
Score = 118 bits (252), Expect(3) = 6e-044
Identities = 42/64 (65%), Positives = 48/64 (75%)
Frame = +1 / -2
Query: 31 WNPDAIVFNSWQHYGTPSYWMQTXFRRVNRAIVHPVNIXXXXXXXXXXXXITWQDAENSF 210
WNPDAIVFNSWQHYGTPSYWMQT FR + A++HP+N+ ITWQD+ENSF
Sbjct: 411 WNPDAIVFNSWQHYGTPSYWMQTLFRESSGAMIHPINMSSRYSSSLAASAITWQDSENSF 232
Query: 211 LRVK 222
LRVK
Sbjct: 231 LRVK 220
Score = 84.0 bits (177), Expect(2) = 4e-027
Identities = 37/64 (57%), Positives = 46/64 (71%)
Frame = -1 / +1
Query: 222 LHSQEAILCILPRDRRRGQRTRVPGTDINRMNNGAVDSXEXXLHPVARSXIVLPGVEDNS 43
L+S+EAIL +LPR+ R R VPGT IN M++G E LHPV RS ++LPGVEDNS
Sbjct: 220 LYSKEAIL*VLPRNCRCS*RA*VPGTHINWMDHGTTGLTEKCLHPVTRSSVMLPGVEDNS 399
Query: 42 VRVP 31
+RVP
Sbjct: 400 IRVP 411
Score = 81.3 bits (171), Expect(2) = 2e-025
Identities = 41/69 (59%), Positives = 44/69 (63%)
Frame = +2 / -3
Query: 17 TMTKRGTRTLLSSTPGNTMXLLATGCRXFSXESTAPLFIRLISVPGTRVRWPRLRSRGRM 196
T GTR LLSSTPGN LL TGCR FS P I+LI VPGT+ R L+ RGR
Sbjct: 425 TKQSGGTRMLLSSTPGNITELLVTGCRHFSVSPVVP*SIQLI*VPGTQAR*LHLQLRGRT 246
Query: 197 QRIAS*E*R 223
QRIAS E*R
Sbjct: 245 QRIASLE*R 219
Score = 76.2 bits (160), Expect(3) = 6e-044
Identities = 33/38 (86%), Positives = 37/38 (97%)
Frame = +1 / -1
Query: 217 VKVVNFGSDTVNLTVSTSGLGASVNALGSTATVLTSGN 330
V+VVNFGSDTV+LT+STSGL ASVN+LGSTATVLTSGN
Sbjct: 115 VQVVNFGSDTVSLTISTSGLQASVNSLGSTATVLTSGN 2
Score = 75.3 bits (158), Expect(2) = 7e-045
Identities = 34/38 (89%), Positives = 34/38 (89%)
Frame = -2 / +3
Query: 329 LPDVRTVAVDPSALTLAPSPLVETVRLTVSDPKFTTFT 216
LPDVRTVAVDPS LTLA SPLVE VRLTVSDPKFTT T
Sbjct: 3 LPDVRTVAVDPSELTLA*SPLVEIVRLTVSDPKFTTCT 116
Score = 68.4 bits (143), Expect(2) = 1e-021
Identities = 32/66 (48%), Positives = 39/66 (59%)
Frame = +3 / -1
Query: 30 VEPGRYCXXXXXXXXXXXXXDADXFPXSQPRHCSSG*YQFPVLEFAGRVCDHVAGCRE*L 209
VEPG YC DAD FP Q H S *Y+FPVL+ A +C++VAG RE*L
Sbjct: 412 VEPGCYCLQLLATLRNS*LLDADTFP*VQWCHDPSN*YEFPVLKLASCICNYVAGLRE*L 233
Query: 210 PESEGR 227
P S+G+
Sbjct: 232 P*SKGK 215
Score = 58.8 bits (122), Expect(2) = 4e-027
Identities = 25/38 (65%), Positives = 30/38 (78%)
Frame = -1 / +2
Query: 330 VARREDGGG*SQRVDAGPESARGDREVNGVRPEVHDLH 217
VAR E+ GG*SQRVD G +S GDRE N VRP+V++LH
Sbjct: 2 VARCENSGG*SQRVDTGLKSTCGDREANSVRPKVYNLH 115
Score = 56.1 bits (116), Expect(2) = 1e-021
Identities = 25/37 (67%), Positives = 26/37 (70%)
Frame = +2 / -2
Query: 221 RS*TSGRTPLTSRSPRADSGPASTRWDQPPPSSRLAT 331
R *T GRT L SRSP+ D P STRWDQPP S LAT
Sbjct: 111 RL*TLGRTLLASRSPQVDFRPVSTRWDQPPLFSHLAT 1
Score = 56.1 bits (116), Expect(2) = 2e-025
Identities = 23/36 (63%), Positives = 26/36 (72%)
Frame = +3 / -3
Query: 222 GRELRVGHR*PHGLHERTRGQRQRAGINRHRPHVWQ 329
G +L VGH *PH LH+ T GQ Q AGINRH H+WQ
Sbjct: 110 GCKLWVGHC*PHDLHKWTSGQCQLAGINRHCSHIWQ 3
Score = 23.1 bits (44), Expect(3) = 6e-044
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = +1 / -3
Query: 1 PLFVTDNDQT 30
PLFV +NDQT
Sbjct: 530 PLFVNNNDQT 501
>gb|CX622684.1|CX622684 GABR1_65_H12.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_65_H12_A002 3', mRNA sequence
Length = 802
Score = 96.8 bits (205), Expect(2) = 4e-042
Identities = 36/75 (48%), Positives = 47/75 (62%)
Frame = +1 / +3
Query: 1 PLFVTDNDQTWNPDAIVFNSWQHYGTPSYWMQTXFRRVNRAIVHPVNIXXXXXXXXXXXX 180
PLFV DND+ W+PDAIVFNSWQHYG P+YWM F+ + A +HP I
Sbjct: 138 PLFVNDNDRRWSPDAIVFNSWQHYGCPNYWMLHFFKESSGATLHPTAIQISNYDQLLASA 317
Query: 181 ITWQDAENSFLRVKV 225
ITWQ+A++ ++V
Sbjct: 318 ITWQNAKDRSTYLRV 362
Score = 96.4 bits (204), Expect(2) = 4e-042
Identities = 41/90 (45%), Positives = 57/90 (63%)
Frame = +1 / +3
Query: 202 NSFLRVKVVNFGSDTVNLTVSTSGLGASVNALGSTATVLTSGNVMDENSFSNPNKVAPVK 381
+++LRVKVVNFG+ V+L +S + L + GS VLTS + +DENSF P KV PV
Sbjct: 345 STYLRVKVVNFGNQAVDLNISIAELPTGIKKSGSKQMVLTSSSPLDENSFQQPEKVVPVL 524
Query: 382 SQLSNAAEQMQVTLAPHSFTAFDLALAEPK 471
S + N +QM ++ P+S T+FDL L K
Sbjct: 525 SPMVNVGQQMGASVGPYSLTSFDLLLEPSK 614
Score = 72.1 bits (151), Expect(2) = 2e-022
Identities = 38/84 (45%), Positives = 46/84 (54%)
Frame = -2 / -1
Query: 461 ASARSKAVKE*GASVTCICSAALLSWLFTGATLFGLLKEFSSMTLPDVRTVAVDPSALTL 282
+S+RS V+E*G + IC L TG T G KEFSS L DVRT+ DP L
Sbjct: 604 SSSRSNEVRE*GPTDAPICCPTFTIGLNTGTTFSGCWKEFSSSGLLDVRTICFDPDFLMP 425
Query: 281 APSPLVETVRLTVSDPKFTTFTLR 210
S ++ +R T PK TTFTLR
Sbjct: 424 VGSSAMDMLRSTAWLPKLTTFTLR 353
Score = 55.1 bits (114), Expect(2) = 2e-022
Identities = 27/43 (62%), Positives = 30/43 (69%)
Frame = -2 / -1
Query: 134 G*TMARLTLRKXVCIQ*LGVP*CCQELKTIASGFHVWSLSVTK 6
G* +A L K IQ*LG P*CC ELKT+ASG H+ SLS TK
Sbjct: 271 G*RVAPLDSLKKCSIQ*LGHP*CCHELKTMASGLHLRSLSFTK 143
>gb|AC169378.1| Sorghum bicolor clone SB_BBc0007L02, WORKING DRAFT SEQUENCE, 2
unordered pieces
Length = 138609
Score = 103 bits (220), Expect(3) = 2e-040
Identities = 40/65 (61%), Positives = 43/65 (66%)
Frame = +1 / -2
Query: 31 WNPDAIVFNSWQHYGTPSYWMQTXFRRVNRAIVHPVNIXXXXXXXXXXXXITWQDAENSF 210
W PDAIVFNSWQ YGTPSYWMQT FR + A HPV I ITW+D +NSF
Sbjct: 6125 WIPDAIVFNSWQQYGTPSYWMQTFFRESSGAEFHPVKITSKYSDSLAASAITWRDTDNSF 5946
Query: 211 LRVKV 225
LRVKV
Sbjct: 5945 LRVKV 5931
Score = 102 bits (218), Expect(3) = 5e-032
Identities = 47/65 (72%), Positives = 50/65 (76%)
Frame = -2 / +1
Query: 224 TFTLRKLFSASCHVIADAASELEYRELILTG*TMARLTLRKXVCIQ*LGVP*CCQELKTI 45
TFTLRKL S S VIADAA+E EY ++ILTG* A L RK VCIQ*LGVP CC ELKTI
Sbjct: 5932 TFTLRKLLSVSLQVIADAANESEYLDVILTG*NSAPLDSRKNVCIQ*LGVPYCCHELKTI 6111
Query: 44 ASGFH 30
ASG H
Sbjct: 6112 ASGIH 6126
Score = 68.0 bits (142), Expect(3) = 2e-040
Identities = 30/53 (56%), Positives = 37/53 (69%)
Frame = +1 / -2
Query: 211 LRVKVVNFGSDTVNLTVSTSGLGASVNALGSTATVLTSGNVMDENSFSNPNKV 369
L +++VNFG D VNLT+ L A+V+A GS TVLTS +VM ENSF NP V
Sbjct: 5819 LCLQIVNFGPDAVNLTIRAHQLRAAVDARGSRVTVLTSSDVMHENSFRNPRNV 5661
Score = 54.7 bits (113), Expect(3) = 5e-032
Identities = 27/48 (56%), Positives = 29/48 (60%)
Frame = -2 / +1
Query: 368 TLFGLLKEFSSMTLPDVRTVAVDPSALTLAPSPLVETVRLTVSDPKFT 225
TL G L EFS +T DVRTV +DP A T A S VR T S PKFT
Sbjct: 5662 TLRGFLNEFSCITSLDVRTVTLDPLASTAARSWCARIVRFTASGPKFT 5805
Score = 52.4 bits (108), Expect(3) = 2e-040
Identities = 24/42 (57%), Positives = 30/42 (71%)
Frame = +1 / -3
Query: 364 KVAPVKSQLSNAAEQMQVTLAPHSFTAFDLALAEPKLVAEI* 489
+V PV L NA ++MQ LAP+SFT+FDLAL E K AE+*
Sbjct: 5395 QVVPVTRGLPNAGKEMQALLAPYSFTSFDLALEEYKSFAEM* 5270
Score = 38.2 bits (77), Expect(3) = 5e-032
Identities = 21/41 (51%), Positives = 24/41 (58%)
Frame = -2 / +3
Query: 488 HISATSLGSASARSKAVKE*GASVTCICSAALLSWLFTGAT 366
HISA L S+ A+S V E GAS CI AL + L TG T
Sbjct: 5271 HISAKLLYSSRAKSNEVNEYGASKACISFPALGNPLVTGTT 5393
>gb|CD463051.1|CD463051 ETH1_42_E06.b1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_42_E06_A002 3', mRNA sequence
Length = 418
Score = 161 bits (346), Expect(2) = 3e-040
Identities = 61/88 (69%), Positives = 69/88 (78%)
Frame = +1 / +3
Query: 1 PLFVTDNDQTWNPDAIVFNSWQHYGTPSYWMQTXFRRVNRAIVHPVNIXXXXXXXXXXXX 180
PLFV +NDQTWNPDAIVFNSWQHYGTPSYWMQT FR + A +HP+N+
Sbjct: 39 PLFVNNNDQTWNPDAIVFNSWQHYGTPSYWMQTLFRESSGATIHPINMSSRYSSSLAAFA 218
Query: 181 ITWQDAENSFLRVKVVNFGSDTVNLTVS 264
ITWQD+ENSFLRVKVVNFGSDTV+L+ S
Sbjct: 219 ITWQDSENSFLRVKVVNFGSDTVSLSPS 302
Score = 154 bits (331), Expect = 1e-036
Identities = 70/85 (82%), Positives = 73/85 (85%)
Frame = -2 / -1
Query: 257 VRLTVSDPKFTTFTLRKLFSASCHVIADAASELEYRELILTG*TMARLTLRKXVCIQ*LG 78
+RLTVSDPKFTTFTLRKLFS SCHVIA+AASELEYRELIL G +A L RK VCIQ*LG
Sbjct: 295 LRLTVSDPKFTTFTLRKLFSESCHVIANAASELEYRELILIGWIVAPLDSRKSVCIQ*LG 116
Query: 77 VP*CCQELKTIASGFHVWSLSVTKS 3
VP*CCQELKTIASGFHV SL T S
Sbjct: 115 VP*CCQELKTIASGFHV*SLLFTNS 41
Score = 112 bits (239), Expect = 7e-024
Identities = 48/85 (56%), Positives = 62/85 (72%)
Frame = -1 / -3
Query: 255 EVNGVRPEVHDLHSQEAILCILPRDRRRGQRTRVPGTDINRMNNGAVDSXEXXLHPVARS 76
E N VRP+V++L+S+EAIL +LPR+ + R VPGT IN M+ G E LHPV RS
Sbjct: 293 EANSVRPKVYNLYSKEAIL*VLPRNCKCS*RA*VPGTHINWMDRGTTGLTEKCLHPVTRS 114
Query: 75 XIVLPGVEDNSVRVPRLVIVGHEEW 1
++LPGVE+NS+RVPRL+IV HE W
Sbjct: 113 SVMLPGVENNSIRVPRLIIVIHE*W 39
Score = 26.7 bits (52), Expect(2) = 3e-040
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +2 / +3
Query: 461 LSPSLWRRYDVCAA 502
LSPSLW+R D C +
Sbjct: 291 LSPSLWQRCDQCVS 332
>gb|CW375131.1|CW375131 fsbb001f052f19k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f052f19, DNA
sequence
Length = 557
Score = 107 bits (228), Expect(3) = 3e-035
Identities = 46/51 (90%), Positives = 50/51 (98%)
Frame = +1 / +2
Query: 217 VKVVNFGSDTVNLTVSTSGLGASVNALGSTATVLTSGNVMDENSFSNPNKV 369
V+VVNFGSDTV+LT+STSGL ASVN+LGSTATVLTSGNVMDENSFSNPNKV
Sbjct: 236 VQVVNFGSDTVSLTISTSGLQASVNSLGSTATVLTSGNVMDENSFSNPNKV 388
Score = 102 bits (217), Expect(3) = 2e-039
Identities = 46/51 (90%), Positives = 47/51 (92%)
Frame = -2 / -3
Query: 368 TLFGLLKEFSSMTLPDVRTVAVDPSALTLAPSPLVETVRLTVSDPKFTTFT 216
TLFGLLKEFSS+TLPDVRTVAVDPS LTLA SPLVE VRLTVSDPKFTT T
Sbjct: 387 TLFGLLKEFSSITLPDVRTVAVDPSELTLA*SPLVEIVRLTVSDPKFTTCT 235
Score = 77.6 bits (163), Expect(3) = 2e-039
Identities = 35/43 (81%), Positives = 35/43 (81%)
Frame = -2 / -2
Query: 221 FTLRKLFSASCHVIADAASELEYRELILTG*TMARLTLRKXVC 93
FTLRKLFS SCHVIADAASELEYRELIL G MA L RK VC
Sbjct: 130 FTLRKLFSESCHVIADAASELEYRELILIGWIMAPLDSRKSVC 2
Score = 75.8 bits (159), Expect(2) = 1e-023
Identities = 32/49 (65%), Positives = 37/49 (75%)
Frame = +3 / +1
Query: 222 GRELRVGHR*PHGLHERTRGQRQRAGINRHRPHVWQRHGRELLQ*PEQG 368
G +L VGH *PH LH+ T GQ Q AGINRH H+WQR+G EL Q*P+QG
Sbjct: 241 GCKLWVGHC*PHDLHKWTSGQCQLAGINRHCSHIWQRYG*ELFQ*PKQG 387
Score = 73.9 bits (155), Expect(2) = 5e-021
Identities = 33/49 (67%), Positives = 35/49 (71%)
Frame = +2 / +3
Query: 221 RS*TSGRTPLTSRSPRADSGPASTRWDQPPPSSRLATSWTRTPSVTRTR 367
R *T GRT L SRSP+ D P STRWDQPP S LAT W RT SVT+TR
Sbjct: 240 RL*TLGRTLLASRSPQVDFRPVSTRWDQPPLFSHLATLWMRTLSVTQTR 386
Score = 57.0 bits (118), Expect(3) = 3e-035
Identities = 21/43 (48%), Positives = 27/43 (62%)
Frame = +1 / +3
Query: 94 QTXFRRVNRAIVHPVNIXXXXXXXXXXXXITWQDAENSFLRVK 222
QT FR + A++HP+N+ ITWQD+ENSFLRVK
Sbjct: 3 QTLFRESSGAMIHPINMSSRYSSSLAASAITWQDSENSFLRVK 131
Score = 55.6 bits (115), Expect(2) = 1e-023
Identities = 25/45 (55%), Positives = 32/45 (71%)
Frame = +3 / +2
Query: 93 ADXFPXSQPRHCSSG*YQFPVLEFAGRVCDHVAGCRE*LPESEGR 227
AD FP Q H S *Y+FPVL+ A +C++VAG RE*LP S+G+
Sbjct: 2 ADTFP*VQWCHDPSN*YEFPVLKLASCICNYVAGLRE*LP*SKGK 136
Score = 48.3 bits (99), Expect(2) = 5e-021
Identities = 25/44 (56%), Positives = 28/44 (63%)
Frame = +2 / +1
Query: 92 CRXFSXESTAPLFIRLISVPGTRVRWPRLRSRGRMQRIAS*E*R 223
CR FS P I+LI VPGT+ R L+ RGR QRIAS E*R
Sbjct: 1 CRHFSVSPVVP*SIQLI*VPGTQAR*LHLQLRGRTQRIASLE*R 132
Score = 24.0 bits (46), Expect(3) = 3e-035
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +3 / +2
Query: 375 GEKPAEQRRGA 407
GEKPAEQR G+
Sbjct: 515 GEKPAEQRWGS 547
Score = 22.1 bits (42), Expect(3) = 2e-039
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -2 / -2
Query: 398 ALLSWLFT 375
ALLSWLFT
Sbjct: 538 ALLSWLFT 515
>gb|BI075496.1|BI075496 IP1_21_C05.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 459
Score = 154 bits (330), Expect(2) = 2e-036
Identities = 67/90 (74%), Positives = 75/90 (83%)
Frame = +1 / +2
Query: 202 NSFLRVKVVNFGSDTVNLTVSTSGLGASVNALGSTATVLTSGNVMDENSFSNPNKVAPVK 381
NSFLRVK+VNF SD +T+ST+GL +S++ L STATVLTS NVMDENSFSNPNKV PVK
Sbjct: 44 NSFLRVKIVNFESDAARVTISTTGLESSIDVLRSTATVLTSTNVMDENSFSNPNKVVPVK 223
Query: 382 SQLSNAAEQMQVTLAPHSFTAFDLALAEPK 471
SQL A QMQVTLAPHSFT+FDLALA K
Sbjct: 224 SQLFEAGAQMQVTLAPHSFTSFDLALAPSK 313
Score = 130 bits (278), Expect(2) = 2e-030
Identities = 61/91 (67%), Positives = 66/91 (72%)
Frame = -2 / -1
Query: 482 SATSLGSASARSKAVKE*GASVTCICSAALLSWLFTGATLFGLLKEFSSMTLPDVRTVAV 303
+ +L A ARSK V E*GASVTCIC+ A SWL TG TLFGLLKEFSS+TL DVRTVAV
Sbjct: 324 NVANLDGARARSKDVNE*GASVTCICAPASNSWLLTGTTLFGLLKEFSSITLVDVRTVAV 145
Query: 302 DPSALTLAPSPLVETVRLTVSDPKFTTFTLR 210
D S L SP+VE V L SD KFT FTLR
Sbjct: 144 DRSTSMLDSSPVVEIVTLAASDSKFTIFTLR 52
Score = 24.0 bits (46), Expect(2) = 2e-030
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = -2 / -1
Query: 209 KLFSASCHVIADAASE 162
+LFS S VIADAA E
Sbjct: 48 ELFSESFQVIADAARE 1
Score = 21.7 bits (41), Expect(2) = 2e-036
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = +3 / +1
Query: 162 FAGRVCDHVAGCRE*L 209
F+ VC+++ G RE*L
Sbjct: 1 FSSSVCNYLEGFRE*L 48
>gb|CW360333.1|CW360333 fsbb001f028g01k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f028g01, DNA
sequence
Length = 730
Score = 103 bits (220), Expect(2) = 1e-035
Identities = 40/65 (61%), Positives = 43/65 (66%)
Frame = +1 / +2
Query: 31 WNPDAIVFNSWQHYGTPSYWMQTXFRRVNRAIVHPVNIXXXXXXXXXXXXITWQDAENSF 210
W PDAIVFNSWQ YGTPSYWMQT FR + A HPV I ITW+D +NSF
Sbjct: 218 WIPDAIVFNSWQQYGTPSYWMQTFFRESSGAEFHPVKITSKYSDSLAASAITWRDTDNSF 397
Query: 211 LRVKV 225
LRVKV
Sbjct: 398 LRVKV 412
Score = 102 bits (218), Expect(2) = 8e-031
Identities = 47/65 (72%), Positives = 50/65 (76%)
Frame = -2 / -2
Query: 224 TFTLRKLFSASCHVIADAASELEYRELILTG*TMARLTLRKXVCIQ*LGVP*CCQELKTI 45
TFTLRKL S S VIADAA+E EY ++ILTG* A L RK VCIQ*LGVP CC ELKTI
Sbjct: 411 TFTLRKLLSVSLQVIADAANESEYLDVILTG*NSAPLDSRKNVCIQ*LGVPYCCHELKTI 232
Query: 44 ASGFH 30
ASG H
Sbjct: 231 ASGIH 217
Score = 68.0 bits (142), Expect(2) = 1e-035
Identities = 30/53 (56%), Positives = 37/53 (69%)
Frame = +1 / +2
Query: 211 LRVKVVNFGSDTVNLTVSTSGLGASVNALGSTATVLTSGNVMDENSFSNPNKV 369
L +++VNFG D VNLT+ L A+V+A GS TVLTS +VM ENSF NP V
Sbjct: 524 LCLQIVNFGPDAVNLTIRAHQLRAAVDARGSRVTVLTSSDVMHENSFRNPRNV 682
Score = 54.7 bits (113), Expect(2) = 8e-031
Identities = 27/48 (56%), Positives = 29/48 (60%)
Frame = -2 / -2
Query: 368 TLFGLLKEFSSMTLPDVRTVAVDPSALTLAPSPLVETVRLTVSDPKFT 225
TL G L EFS +T DVRTV +DP A T A S VR T S PKFT
Sbjct: 681 TLRGFLNEFSCITSLDVRTVTLDPLASTAARSWCARIVRFTASGPKFT 538
>gb|CW128898.1|CW128898 104_510_11114268_116_34757_036 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11114268, DNA
sequence
Length = 620
Score = 84.0 bits (177), Expect(3) = 1e-029
Identities = 35/51 (68%), Positives = 43/51 (84%)
Frame = +1 / -1
Query: 217 VKVVNFGSDTVNLTVSTSGLGASVNALGSTATVLTSGNVMDENSFSNPNKV 369
V++VNF SD +T+ST+GL +S++ L STATVLTS NVMDENSFSNPNKV
Sbjct: 500 VQIVNFESDAARVTISTTGLESSIDVLRSTATVLTSTNVMDENSFSNPNKV 348
Score = 73.0 bits (153), Expect(2) = 1e-022
Identities = 35/51 (68%), Positives = 37/51 (72%)
Frame = -2 / +1
Query: 368 TLFGLLKEFSSMTLPDVRTVAVDPSALTLAPSPLVETVRLTVSDPKFTTFT 216
TLFGLLKEFSS+TL DVRTVAVD S L SP+VE V L SD KFT T
Sbjct: 349 TLFGLLKEFSSITLVDVRTVAVDRSTSMLDSSPVVEIVTLAASDSKFTICT 501
Score = 62.0 bits (129), Expect(3) = 1e-029
Identities = 27/36 (75%), Positives = 29/36 (80%)
Frame = +1 / -2
Query: 364 KVAPVKSQLSNAAEQMQVTLAPHSFTAFDLALAEPK 471
+V PVKSQL A QMQVTLAPHSFT+FDLALA K
Sbjct: 232 QVVPVKSQLFEAGAQMQVTLAPHSFTSFDLALAPSK 125
Score = 54.7 bits (113), Expect(2) = 1e-022
Identities = 24/39 (61%), Positives = 27/39 (69%)
Frame = -2 / +3
Query: 482 SATSLGSASARSKAVKE*GASVTCICSAALLSWLFTGAT 366
+ +L A ARSK V E*GASVTCIC+ A SWL TG T
Sbjct: 114 NVANLDGARARSKDVNE*GASVTCICAPASNSWLLTGTT 230
Score = 23.1 bits (44), Expect(3) = 1e-029
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +1 / -2
Query: 202 NSFLRVKVVNF 234
NSFLRVK NF
Sbjct: 601 NSFLRVKASNF 569
>gb|CW392111.1|CW392111 fsbb001f078j07k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f078j07, DNA
sequence
Length = 802
Score = 73.5 bits (154), Expect(3) = 2e-028
Identities = 27/65 (41%), Positives = 36/65 (55%)
Frame = +1 / -1
Query: 31 WNPDAIVFNSWQHYGTPSYWMQTXFRRVNRAIVHPVNIXXXXXXXXXXXXITWQDAENSF 210
WNPDAIVFNSWQHYG P+YW+ F+ + A +HP I ITW + +
Sbjct: 508 WNPDAIVFNSWQHYGCPNYWILHFFKDSSGAALHPSTIQLPNYDQLVTSAITWNNPHDGN 329
Query: 211 LRVKV 225
+K+
Sbjct: 328 TYLKI 314
Score = 68.4 bits (143), Expect(3) = 2e-028
Identities = 29/50 (58%), Positives = 35/50 (70%)
Frame = +1 / -3
Query: 220 KVVNFGSDTVNLTVSTSGLGASVNALGSTATVLTSGNVMDENSFSNPNKV 369
+VVNFGS VNL +S +GL A + GS TVLTSG + DENSF P+KV
Sbjct: 230 QVVNFGSKAVNLNISVTGLEADIQTFGSLKTVLTSGWLRDENSFQQPDKV 81
Score = 23.1 bits (44), Expect(3) = 2e-028
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +1 / -2
Query: 1 PLFVTDNDQ 27
PLFV DNDQ
Sbjct: 630 PLFVNDNDQ 604
>gb|CD232395.1|CD232395 SS1_45_A09.b1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_45_A09_A012 3', mRNA sequence
Length = 272
Score = 120 bits (257), Expect(2) = 6e-027
Identities = 52/62 (83%), Positives = 55/62 (88%)
Frame = +1 / +1
Query: 313 VLTSGNVMDENSFSNPNKVAPVKSQLSNAAEQMQVTLAPHSFTAFDLALAEPKLVAEI*C 492
VLT GNVMDENSFSNPNKVAPVKSQLSNA EQMQVTLAPHSFT DLALA+ LVAE+*
Sbjct: 1 VLTCGNVMDENSFSNPNKVAPVKSQLSNAGEQMQVTLAPHSFTTLDLALAQSNLVAEM*S 180
Query: 493 VC 498
+C
Sbjct: 181 MC 186
Score = 112 bits (240), Expect(3) = 9e-025
Identities = 50/61 (81%), Positives = 52/61 (85%)
Frame = -2 / -1
Query: 497 HTHHISATSLGSASARSKAVKE*GASVTCICSAALLSWLFTGATLFGLLKEFSSMTLPDV 318
H HISAT L ASA+S VKE*GASVTCICS ALLSWLFTGATLFGLLKEFSS+TLP V
Sbjct: 185 HIDHISATRLD*ASAKSNVVKE*GASVTCICSPALLSWLFTGATLFGLLKEFSSITLPHV 6
Query: 317 R 315
R
Sbjct: 5 R 3
Score = 106 bits (227), Expect = 3e-022
Identities = 45/62 (72%), Positives = 49/62 (79%)
Frame = +2 / +2
Query: 317 SRLATSWTRTPSVTRTRLRR*KAS*ATPRSRCRSRWLLTPSPPSIWRWLSPSLWRRYDVC 496
S +AT W RT SVT+TRL R*KAS*AT SRCRSRWLLTPSP IWRWLSP LW+R D C
Sbjct: 5 SHVATLWMRTLSVTQTRLHR*KAS*ATLGSRCRSRWLLTPSPRWIWRWLSPILWQRCDQC 184
Query: 497 AA 502
+
Sbjct: 185 VS 190
Score = 105 bits (225), Expect = 6e-022
Identities = 43/61 (70%), Positives = 50/61 (81%)
Frame = +3 / +3
Query: 318 HVWQRHGRELLQ*PEQGCAGEKPAEQRRGADAGHAGSSLLHRLRSGAG*AQACGGDMMCV 497
H+WQR+G EL Q*P+QGC GEKPAEQR GADAGHAGSSLLH + GAG Q+CG D++ V
Sbjct: 6 HMWQRYG*ELFQ*PKQGCTGEKPAEQRWGADAGHAGSSLLHHVGFGAGSVQSCGRDVINV 185
Query: 498 L 500
L
Sbjct: 186 L 188
Score = 21.2 bits (40), Expect(2) = 6e-027
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +3 / +3
Query: 648 NKNHIRF 668
NKNHIRF
Sbjct: 252 NKNHIRF 272
Score = 19.9 bits (37), Expect(3) = 9e-025
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = -3 / -3
Query: 613 IVVHQYKAFFI 581
I + +YKAFFI
Sbjct: 228 ICIVEYKAFFI 196
Score = 18.9 bits (35), Expect(3) = 9e-025
Identities = 6/7 (85%), Positives = 7/7 (100%)
Frame = -2 / -1
Query: 668 KPDVVFI 648
KPDV+FI
Sbjct: 272 KPDVIFI 252
>gb|BG556693.1|BG556693 EM1_40_D05.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 191
Score = 119 bits (255), Expect = 5e-026
Identities = 53/63 (84%), Positives = 58/63 (92%)
Frame = +1 / +2
Query: 205 SFLRVKVVNFGSDTVNLTVSTSGLGASVNALGSTATVLTSGNVMDENSFSNPNKVAPVKS 384
SFLRVKVV+ GSD V+LT+STSGL ASVN+LGSTATVLTSG VMDE SFSNPNKVAPVKS
Sbjct: 2 SFLRVKVVSSGSDPVSLTISTSGLQASVNSLGSTATVLTSGTVMDETSFSNPNKVAPVKS 181
Query: 385 QLS 393
Q+S
Sbjct: 182 QMS 190
Score = 117 bits (251), Expect = 2e-025
Identities = 53/63 (84%), Positives = 56/63 (88%)
Frame = -2 / -3
Query: 392 LSWLFTGATLFGLLKEFSSMTLPDVRTVAVDPSALTLAPSPLVETVRLTVSDPKFTTFTL 213
L WLFTGATLFGLLKE SS+T+PDVRTVAVDPS LTLA SPLVE VRLT SDP+ TTFTL
Sbjct: 189 LIWLFTGATLFGLLKEVSSITVPDVRTVAVDPSELTLA*SPLVEIVRLTGSDPEDTTFTL 10
Query: 212 RKL 204
RKL
Sbjct: 9 RKL 1
>gb|CW199474.1|CW199474 104_624_11183529_148_36850_037 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11183529, DNA
sequence
Length = 743
Score = 103 bits (220), Expect(2) = 8e-025
Identities = 40/65 (61%), Positives = 43/65 (66%)
Frame = +1 / -3
Query: 31 WNPDAIVFNSWQHYGTPSYWMQTXFRRVNRAIVHPVNIXXXXXXXXXXXXITWQDAENSF 210
W PDAIVFNSWQ YGTPSYWMQT FR + A HPV I ITW+D +NSF
Sbjct: 384 WIPDAIVFNSWQQYGTPSYWMQTFFRESSGAEFHPVKITSKYSDSLAASAITWRDTDNSF 205
Query: 211 LRVKV 225
LRVKV
Sbjct: 204 LRVKV 190
Score = 102 bits (218), Expect = 6e-021
Identities = 47/65 (72%), Positives = 50/65 (76%)
Frame = -2 / +2
Query: 224 TFTLRKLFSASCHVIADAASELEYRELILTG*TMARLTLRKXVCIQ*LGVP*CCQELKTI 45
TFTLRKL S S VIADAA+E EY ++ILTG* A L RK VCIQ*LGVP CC ELKTI
Sbjct: 191 TFTLRKLLSVSLQVIADAANESEYLDVILTG*NSAPLDSRKNVCIQ*LGVPYCCHELKTI 370
Query: 44 ASGFH 30
ASG H
Sbjct: 371 ASGIH 385
Score = 31.3 bits (62), Expect(2) = 8e-025
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = +1 / -3
Query: 211 LRVKVVNFGSDTVNLTVSTSGLGASV 288
L +++VNFG D VNLT+ L A+V
Sbjct: 78 LCLQIVNFGPDAVNLTIRAHQLRAAV 1
>gb|CW048319.1|CW048319 104_286_10513293_114_30214 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10513293, DNA
sequence
Length = 485
Score = 98.2 bits (208), Expect(2) = 2e-024
Identities = 41/51 (80%), Positives = 46/51 (90%)
Frame = +1 / +1
Query: 217 VKVVNFGSDTVNLTVSTSGLGASVNALGSTATVLTSGNVMDENSFSNPNKV 369
V+V+NFGSD V LT+ST+GL AS+NALGSTATVLTS NVMDENSFSNP KV
Sbjct: 157 VQVINFGSDAVTLTISTTGLQASINALGSTATVLTSANVMDENSFSNPTKV 309
Score = 83.5 bits (176), Expect(2) = 9e-023
Identities = 38/51 (74%), Positives = 41/51 (80%)
Frame = -2 / -1
Query: 368 TLFGLLKEFSSMTLPDVRTVAVDPSALTLAPSPLVETVRLTVSDPKFTTFT 216
TL GLLKEFSS+T DVRTVAVDP AL LA SP+VE VR+T SDPKF T T
Sbjct: 308 TLVGLLKEFSSITFADVRTVAVDPRALILAWSPVVEIVRVTASDPKFMTCT 156
Score = 44.6 bits (91), Expect(2) = 9e-023
Identities = 21/26 (80%), Positives = 21/26 (80%)
Frame = -2 / -2
Query: 221 FTLRKLFSASCHVIADAASELEYREL 144
FTLRKLFS SC VIADAASE E EL
Sbjct: 79 FTLRKLFSESCQVIADAASEPE*LEL 2
Score = 35.4 bits (71), Expect(2) = 2e-024
Identities = 13/14 (92%), Positives = 14/14 (100%)
Frame = +1 / +3
Query: 181 ITWQDAENSFLRVK 222
ITWQD+ENSFLRVK
Sbjct: 39 ITWQDSENSFLRVK 80
>gb|CW040084.1|CW040084 104_273_10505880_114_30266 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10505880, DNA
sequence
Length = 647
Score = 73.0 bits (153), Expect(2) = 4e-023
Identities = 27/56 (48%), Positives = 34/56 (60%)
Frame = +1 / +1
Query: 37 PDAIVFNSWQHYGTPSYWMQTXFRRVNRAIVHPVNIXXXXXXXXXXXXITWQDAEN 204
PDAIVFNSWQHYG P+YWM F+ + A +HP I ITWQ+A++
Sbjct: 1 PDAIVFNSWQHYGCPNYWMLHFFKESSGATLHPTAIQISNYDQLLASAITWQNAKD 168
Score = 56.5 bits (117), Expect(2) = 4e-023
Identities = 24/62 (38%), Positives = 37/62 (59%)
Frame = +1 / +3
Query: 211 LRVKVVNFGSDTVNLTVSTSGLGASVNALGSTATVLTSGNVMDENSFSNPNKVAPVKSQL 390
+ ++VVNFG+ V+L +S + L + GS VLTS + +DENSF P KV+ +
Sbjct: 282 IHLQVVNFGNQAVDLNISIAELPTGIKKSGSKQMVLTSSSPLDENSFQQPEKVSARTESV 461
Query: 391 SN 396
S+
Sbjct: 462 SD 467
>gb|CD234501.1|CD234501 SS1_27_C11.g1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_27_C11_A012 5', mRNA sequence
Length = 673
Score = 107 bits (228), Expect = 2e-022
Identities = 37/48 (77%), Positives = 43/48 (89%)
Frame = +1 / +3
Query: 1 PLFVTDNDQTWNPDAIVFNSWQHYGTPSYWMQTXFRRVNRAIVHPVNI 144
PLFV +NDQTWNPDAIVFNSWQHYGTPSYWMQT FR + A++HP+N+
Sbjct: 495 PLFVNNNDQTWNPDAIVFNSWQHYGTPSYWMQTLFRESSGAMIHPINM 638
>gb|CW275167.1|CW275167 104_748_11404818_148_35383_073 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11404818, DNA
sequence
Length = 650
Score = 68.4 bits (143), Expect(2) = 3e-022
Identities = 29/50 (58%), Positives = 35/50 (70%)
Frame = +1 / +1
Query: 220 KVVNFGSDTVNLTVSTSGLGASVNALGSTATVLTSGNVMDENSFSNPNKV 369
+VVNFGS VNL +S +GL A + GS TVLTSG + DENSF P+KV
Sbjct: 265 QVVNFGSKAVNLNISVTGLEADIQTFGSLKTVLTSGWLRDENSFQQPDKV 414
Score = 57.9 bits (120), Expect(2) = 3e-022
Identities = 22/60 (36%), Positives = 31/60 (51%)
Frame = +1 / +2
Query: 46 IVFNSWQHYGTPSYWMQTXFRRVNRAIVHPVNIXXXXXXXXXXXXITWQDAENSFLRVKV 225
IVFNSWQHYG P+YW+ F+ + A +HP I ITW + + +K+
Sbjct: 2 IVFNSWQHYGCPNYWILHFFKDSSGAALHPSTIQLPNYDQLVTSAITWNNPHDGNTYLKI 181
>gb|CW375130.1|CW375130 fsbb001f052f19f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f052f19, DNA
sequence
Length = 831
Score = 93.2 bits (197), Expect(2) = 8e-022
Identities = 38/46 (82%), Positives = 40/46 (86%)
Frame = +2 / -3
Query: 365 RLRR*KAS*ATPRSRCRSRWLLTPSPPSIWRWLSPSLWRRYDVCAA 502
RLRR*KAS*AT SRCRSRWLLTPSP SIWRWLSPSLW+R D C +
Sbjct: 724 RLRR*KAS*ATLGSRCRSRWLLTPSPRSIWRWLSPSLWQRCDQCVS 587
Score = 31.8 bits (63), Expect(2) = 8e-022
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = +1 / -2
Query: 604 VPRYRITYYVLLLHEIKTTSGFCLVLVGFLSPVRVCFA 717
+PRYR Y + +++ +CL+L+ FL +C A
Sbjct: 563 IPRYRYIYLLYYMNKNHIRFVWCLILICFLRTCLLCMA 450
>gb|CW342782.1|CW342782 104_844_11487063_148_36178_052 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11487063, DNA
sequence
Length = 706
Score = 93.2 bits (197), Expect(2) = 8e-022
Identities = 38/46 (82%), Positives = 40/46 (86%)
Frame = +2 / +1
Query: 365 RLRR*KAS*ATPRSRCRSRWLLTPSPPSIWRWLSPSLWRRYDVCAA 502
RLRR*KAS*AT SRCRSRWLLTPSP SIWRWLSPSLW+R D C +
Sbjct: 94 RLRR*KAS*ATLGSRCRSRWLLTPSPRSIWRWLSPSLWQRCDQCVS 231
Score = 31.8 bits (63), Expect(2) = 8e-022
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = +1 / +3
Query: 604 VPRYRITYYVLLLHEIKTTSGFCLVLVGFLSPVRVCFA 717
+PRYR Y + +++ +CL+L+ FL +C A
Sbjct: 255 IPRYRYIYLLYYMNKNHIRFVWCLILICFLRTCLLCMA 368
>gb|CW203726.1|CW203726 104_631_11186168_116_37062_024 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11186168, DNA
sequence
Length = 652
Score = 93.2 bits (197), Expect(2) = 8e-022
Identities = 38/46 (82%), Positives = 40/46 (86%)
Frame = +2 / -1
Query: 365 RLRR*KAS*ATPRSRCRSRWLLTPSPPSIWRWLSPSLWRRYDVCAA 502
RLRR*KAS*AT SRCRSRWLLTPSP SIWRWLSPSLW+R D C +
Sbjct: 649 RLRR*KAS*ATLGSRCRSRWLLTPSPRSIWRWLSPSLWQRCDQCVS 512
Score = 31.8 bits (63), Expect(2) = 8e-022
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = +1 / -3
Query: 604 VPRYRITYYVLLLHEIKTTSGFCLVLVGFLSPVRVCFA 717
+PRYR Y + +++ +CL+L+ FL +C A
Sbjct: 488 IPRYRYIYLLYYMNKNHIRFVWCLILICFLRTCLLCMA 375
>gb|CW391259.1|CW391259 fsbb001f077f01k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f077f01, DNA
sequence
Length = 564
Score = 93.2 bits (197), Expect(2) = 8e-022
Identities = 38/46 (82%), Positives = 40/46 (86%)
Frame = +2 / -3
Query: 365 RLRR*KAS*ATPRSRCRSRWLLTPSPPSIWRWLSPSLWRRYDVCAA 502
RLRR*KAS*AT SRCRSRWLLTPSP SIWRWLSPSLW+R D C +
Sbjct: 427 RLRR*KAS*ATLGSRCRSRWLLTPSPRSIWRWLSPSLWQRCDQCVS 290
Score = 31.8 bits (63), Expect(2) = 8e-022
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = +1 / -2
Query: 604 VPRYRITYYVLLLHEIKTTSGFCLVLVGFLSPVRVCFA 717
+PRYR Y + +++ +CL+L+ FL +C A
Sbjct: 266 IPRYRYIYLLYYMNKNHIRFVWCLILICFLRTCLLCMA 153
>gb|CF072232.1|CF072232 FE1_6_H10.b1_A002 Iron-deficient seedlings Sorghum bicolor cDNA
clone FE1_6_H10_A002 3', mRNA sequence
Length = 427
Score = 105 bits (224), Expect = 9e-022
Identities = 46/92 (50%), Positives = 60/92 (65%)
Frame = +1 / +3
Query: 211 LRVKVVNFGSDTVNLTVSTSGLGASVNALGSTATVLTSGNVMDENSFSNPNKVAPVKSQL 390
L++KVVNFGS VNL +S +GL A + GS TVLTSG + DENSF P+KV P S +
Sbjct: 3 LKIKVVNFGSKAVNLNISVTGLEADIQTFGSLKTVLTSGWLRDENSFQQPDKVVPAASPI 182
Query: 391 SNAAEQMQVTLAPHSFTAFDLALAEPKLVAEI 486
+NA +QM V L +S T+FDL L + V +
Sbjct: 183 TNAGKQMGVVLNSYSLTSFDLLLDSDQSVPPV 278
>gb|BG933148.1|BG933148 WS1_29_G10.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 576
Score = 104 bits (221), Expect = 2e-021
Identities = 36/46 (78%), Positives = 41/46 (89%)
Frame = +1 / +2
Query: 1 PLFVTDNDQTWNPDAIVFNSWQHYGTPSYWMQTXFRRVNRAIVHPV 138
PLFV +NDQTWNPDAIVFNSWQHYGTPSYWMQT FR + A++HP+
Sbjct: 437 PLFVNNNDQTWNPDAIVFNSWQHYGTPSYWMQTLFRESSGAMIHPI 574
>gb|BI075633.1|BI075633 IP1_23_B05.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 310
Score = 102 bits (218), Expect = 6e-021
Identities = 45/54 (83%), Positives = 46/54 (85%)
Frame = +1 / +3
Query: 310 TVLTSGNVMDENSFSNPNKVAPVKSQLSNAAEQMQVTLAPHSFTAFDLALAEPK 471
TVLTS NVMDENSFSNPNKV PVKSQL A QMQVTLAPHSFT+FDLALA K
Sbjct: 3 TVLTSTNVMDENSFSNPNKVVPVKSQLFEAGAQMQVTLAPHSFTSFDLALAPSK 164
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,073,570,244
Number of Sequences: 832831
Number of extensions: 17184397
Number of successful extensions: 198405
Number of sequences better than 1.0e-020: 47
length of database: 163,786,556
effective HSP length: 54
effective length of database: 118,813,682
effective search space used: 25069686902
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)