TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 1804918.2.4
(634 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BE356628.1|BE356628 DG1_126_E06.g1_A002 Dark Grown 1 (DG... 348 4e-096
gb|BG051739.1|BG051739 FM1_60_F10.g1_A003 Floral-Induced Me... 346 1e-095
gb|CW384483.1|CW384483 fsbb001f067i14f0 Sorghum methylation... 344 6e-094
gb|CF757933.1|CF757933 DSAF1_25_B11.g1_A011 Drought-stresse... 340 8e-094
gb|CW311468.1|CW311468 104_801_11470249_148_36282_015 Sorgh... 344 9e-094
gb|CW310303.1|CW310303 104_799_11469644_116_35746_074 Sorgh... 342 3e-093
gb|BG240279.1|BG240279 OV1_20_A11.b1_A002 Ovary 1 (OV1) Sor... 339 2e-092
gb|AW924764.1|AW924764 WS1_72_G07.b1_A002 Water-stressed 1 ... 338 4e-092
gb|CD227917.1|CD227917 CCC1_56_G05.g1_A007 Callus culture/c... 336 1e-091
gb|CN124945.1|CN124945 RHOH1_7_H09.g1_A002 Acid- and alkali... 332 3e-090
gb|AW672027.1|AW672027 LG1_354_A12.b1_A002 Light Grown 1 (L... 330 1e-089
gb|BG049446.1|BG049446 OV1_20_A11.g1_A002 Ovary 1 (OV1) Sor... 322 2e-088
gb|CW454044.1|CW454044 fsbb001f198e23k0 Sorghum methylation... 323 1e-087
gb|BG412792.1|BG412792 OV2_34_H04.b1_A002 Ovary 2 (OV2) Sor... 309 2e-083
gb|BG158445.1|BG158445 FM1_60_F10.b1_A003 Floral-Induced Me... 309 3e-083
gb|BE356582.1|BE356582 DG1_126_E06.b1_A002 Dark Grown 1 (DG... 307 9e-083
gb|CF490031.1|CF490031 POL1_62_C01.b1_A002 Pollen Sorghum b... 301 5e-082
gb|CD226182.1|CD226182 CCC1_44_A04.b1_A007 Callus culture/c... 297 5e-081
gb|AW565949.1|AW565949 LG1_354_A12.g1_A002 Light Grown 1 (L... 297 5e-081
gb|AW925050.1|AW925050 WS1_74_G10.b1_A002 Water-stressed 1 ... 297 5e-081
gb|AW746435.1|AW746435 WS1_53_G03.b1_A002 Water-stressed 1 ... 294 7e-079
gb|CN124864.1|CN124864 RHOH1_7_H09.b1_A002 Acid- and alkali... 293 1e-078
gb|CW129319.1|CW129319 104_511_11114493_148_34762_091 Sorgh... 292 5e-078
gb|CD227698.1|CD227698 CCC1_53_B08.b1_A007 Callus culture/c... 291 9e-078
gb|CF490113.1|CF490113 POL1_62_C01.g1_A002 Pollen Sorghum b... 201 2e-077
gb|CW454043.1|CW454043 fsbb001f198e23f0 Sorghum methylation... 287 1e-076
gb|AW747659.1|AW747659 WS1_74_G10.g1_A002 Water-stressed 1 ... 277 5e-075
gb|CW310304.1|CW310304 104_799_11469644_148_35750_074 Sorgh... 276 2e-073
gb|CL187762.1|CL187762 104_403_10901109_114_32459_085 Sorgh... 236 2e-061
gb|BE352873.1|BE352873 LG1_269_G01.g1_A002 Light Grown 1 (L... 186 2e-060
gb|BF704767.1|BF704767 FM1_51_C06.b1_A003 Floral-Induced Me... 233 2e-060
gb|AW671110.1|AW671110 LG1_329_E02.b1_A002 Light Grown 1 (L... 179 3e-060
gb|BG050143.1|BG050143 FM1_67_B12.b1_A003 Floral-Induced Me... 231 7e-060
gb|BQ656052.1|BQ656052 pRC0368 Sorghum halepense rhizome cD... 226 1e-059
gb|BF656536.1|BF656536 FM1_51_C06.g1_A003 Floral-Induced Me... 208 4e-054
gb|AW924861.1|AW924861 WS1_72_G07.g1_A002 Water-stressed 1 ... 206 2e-052
gb|CD427733.1|CD427733 ETH1_34_E12.b1_A002 Ethylene-treated... 157 1e-051
gb|CL187296.1|CL187296 104_402_10900781_116_32436_019 Sorgh... 199 5e-050
gb|CD431862.1|CD431862 ETH1_11_A05.g1_A002 Ethylene-treated... 152 5e-050
gb|BE356499.1|BE356499 DG1_125_G10.g1_A002 Dark Grown 1 (DG... 197 1e-049
gb|AW565819.1|AW565819 LG1_352_B02.g1_A002 Light Grown 1 (L... 176 3e-043
gb|CF772218.1|CF772218 DSBF1_30_H03.g1_A010 Drought-stresse... 155 6e-037
gb|CW311467.1|CW311467 104_801_11470249_116_36281_015 Sorgh... 152 4e-036
gb|CW375799.1|CW375799 fsbb001f053f11f0 Sorghum methylation... 150 1e-035
gb|CL165793.1|CL165793 104_361_10808905_114_31820_121 Sorgh... 149 5e-035
gb|AI724349.1|AI724349 RHIZ1_33_B10.y2_A001 Rhizome1 (RHIZ1... 104 2e-023
>gb|BE356628.1|BE356628 DG1_126_E06.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 633
Score = 348 bits (754), Expect(2) = 4e-096
Identities = 151/161 (93%), Positives = 156/161 (96%)
Frame = -1 / +3
Query: 628 TGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVSVVPS 449
TGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVSVVPS
Sbjct: 3 TGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVSVVPS 182
Query: 448 AAALVIKALKEPERDRKKVKNIKHSGNISLDDVIEIAKTMRNRSMAKELAGTVKEILGTC 269
AAALVIKALKEPERDRKKVKNIKHSGNISLDD++EIAKTMR RSMAKE+AGTVKEILGTC
Sbjct: 183 AAALVIKALKEPERDRKKVKNIKHSGNISLDDIVEIAKTMRPRSMAKEMAGTVKEILGTC 362
Query: 268 VSVGCTVDGKDPKDLQQEIDDGEVEIPSA*RLYN*KSSDTI 146
VSVGCTVDGKDPKDLQQEIDDGEVEIPSA*RL+N* T+
Sbjct: 363 VSVGCTVDGKDPKDLQQEIDDGEVEIPSA*RLFN*GDHQTL 485
Score = 232 bits (501), Expect = 4e-060
Identities = 109/155 (70%), Positives = 109/155 (70%)
Frame = +3 / -3
Query: 165 *LYSL*AEXXXXXXXXXXXXXXXXXFPSTVHPTLTQVPRISLTVPANSLAMDLFRMVLAI 344
*L SL*AE PSTVHPTLTQVPRISLTVPA SLAMDL RMVLAI
Sbjct: 466 *LNSL*AEGISTSPSSISCCRSLGSLPSTVHPTLTQVPRISLTVPAISLAMDLGRMVLAI 287
Query: 345 SMTSSRLMLPLCXXXXXXXXXXXXXXXXXXXXXXXEGTTETLACRFCTVSLTVTRRPFQS 524
S SSRLMLPLC EGTTETLACRFCTVSLTVTRRPFQS
Sbjct: 286 STMSSRLMLPLCLMFLTFFLSLSGSLSALMTSAAAEGTTETLACRFCTVSLTVTRRPFQS 107
Query: 525 LAVSLAMSSPIFFGERPSGPILGASDDAAPTSPPV 629
LAVSLAMSSPIFFGERPSGPILGASDDAAPTSPPV
Sbjct: 106 LAVSLAMSSPIFFGERPSGPILGASDDAAPTSPPV 2
Score = 105 bits (223), Expect(2) = 3e-046
Identities = 44/52 (84%), Positives = 45/52 (86%)
Frame = -3 / +2
Query: 320 VHGQGVGRDRQGDPGDLRQRRVHRRWEGPQGLAAGDR*W*GRDPLSLKAIQL 165
VHGQG GR RQGDP DLRQR VHR W+GPQG AAGDR*W*GRDPL LKAIQL
Sbjct: 311 VHGQGDGRHRQGDPRDLRQRWVHR*WQGPQGPAAGDR*W*GRDPLRLKAIQL 466
Score = 101 bits (215), Expect(2) = 3e-046
Identities = 45/58 (77%), Positives = 45/58 (77%)
Frame = -3 / +2
Query: 605 VVAGPQDRPARSLPEEXXXXXXXXXXXGLEGPPRHRQAHRAEPAGQGLRRPLRRGARH 432
VVAG QDRPARSLPEE GLEGPPRHRQAHRAEPAGQGLRR LRRGARH
Sbjct: 26 VVAGTQDRPARSLPEEDR*GHRQGDRQGLEGPPRHRQAHRAEPAGQGLRRALRRGARH 199
Score = 24.9 bits (48), Expect(2) = 4e-096
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = -2 / +2
Query: 135 FVPNAVPAPRSPIIVC 88
FVPNA+ P P +C
Sbjct: 494 FVPNAIFVPLDPAYIC 541
>gb|BG051739.1|BG051739 FM1_60_F10.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 576
Score = 346 bits (750), Expect(2) = 1e-095
Identities = 150/161 (93%), Positives = 156/161 (96%)
Frame = -1 / +2
Query: 628 TGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVSVVPS 449
TGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVSVVPS
Sbjct: 2 TGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVSVVPS 181
Query: 448 AAALVIKALKEPERDRKKVKNIKHSGNISLDDVIEIAKTMRNRSMAKELAGTVKEILGTC 269
AAALVIKALKEPERDRKKVKNIKHSGNISL+D++EIAKTMR RSMAKE+AGTVKEILGTC
Sbjct: 182 AAALVIKALKEPERDRKKVKNIKHSGNISLEDIVEIAKTMRPRSMAKEMAGTVKEILGTC 361
Query: 268 VSVGCTVDGKDPKDLQQEIDDGEVEIPSA*RLYN*KSSDTI 146
VSVGCTVDGKDPKDLQQEIDDGEVEIPSA*RL+N* T+
Sbjct: 362 VSVGCTVDGKDPKDLQQEIDDGEVEIPSA*RLFN*GDHQTL 484
Score = 232 bits (501), Expect = 4e-060
Identities = 109/155 (70%), Positives = 109/155 (70%)
Frame = +3 / -1
Query: 165 *LYSL*AEXXXXXXXXXXXXXXXXXFPSTVHPTLTQVPRISLTVPANSLAMDLFRMVLAI 344
*L SL*AE PSTVHPTLTQVPRISLTVPA SLAMDL RMVLAI
Sbjct: 465 *LNSL*AEGISTSPSSISCCRSLGSLPSTVHPTLTQVPRISLTVPAISLAMDLGRMVLAI 286
Query: 345 SMTSSRLMLPLCXXXXXXXXXXXXXXXXXXXXXXXEGTTETLACRFCTVSLTVTRRPFQS 524
S SSRLMLPLC EGTTETLACRFCTVSLTVTRRPFQS
Sbjct: 285 STMSSRLMLPLCLMFLTFFLSLSGSLSALMTSAAAEGTTETLACRFCTVSLTVTRRPFQS 106
Query: 525 LAVSLAMSSPIFFGERPSGPILGASDDAAPTSPPV 629
LAVSLAMSSPIFFGERPSGPILGASDDAAPTSPPV
Sbjct: 105 LAVSLAMSSPIFFGERPSGPILGASDDAAPTSPPV 1
Score = 105 bits (223), Expect(2) = 3e-046
Identities = 44/52 (84%), Positives = 45/52 (86%)
Frame = -3 / +1
Query: 320 VHGQGVGRDRQGDPGDLRQRRVHRRWEGPQGLAAGDR*W*GRDPLSLKAIQL 165
VHGQG GR RQGDP DLRQR VHR W+GPQG AAGDR*W*GRDPL LKAIQL
Sbjct: 310 VHGQGDGRHRQGDPRDLRQRWVHR*WQGPQGPAAGDR*W*GRDPLRLKAIQL 465
Score = 101 bits (215), Expect(2) = 3e-046
Identities = 45/58 (77%), Positives = 45/58 (77%)
Frame = -3 / +1
Query: 605 VVAGPQDRPARSLPEEXXXXXXXXXXXGLEGPPRHRQAHRAEPAGQGLRRPLRRGARH 432
VVAG QDRPARSLPEE GLEGPPRHRQAHRAEPAGQGLRR LRRGARH
Sbjct: 25 VVAGTQDRPARSLPEEDR*GHRQGDRQGLEGPPRHRQAHRAEPAGQGLRRALRRGARH 198
Score = 24.9 bits (48), Expect(2) = 1e-095
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = -2 / +3
Query: 135 FVPNAVPAPRSPIIVC 88
FVPNA+ P P +C
Sbjct: 492 FVPNAIFVPLDPAYIC 539
>gb|CW384483.1|CW384483 fsbb001f067i14f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f067i14, DNA
sequence
Length = 660
Score = 344 bits (746), Expect = 6e-094
Identities = 150/153 (98%), Positives = 152/153 (99%)
Frame = -1 / -3
Query: 634 RVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVSVV 455
RVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVSVV
Sbjct: 493 RVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVSVV 314
Query: 454 PSAAALVIKALKEPERDRKKVKNIKHSGNISLDDVIEIAKTMRNRSMAKELAGTVKEILG 275
PSAAALVIKALKEPERDRKKVKNIKHSGNISLDDV+EIAKTMR RSMAKE+AGTVKEILG
Sbjct: 313 PSAAALVIKALKEPERDRKKVKNIKHSGNISLDDVVEIAKTMRPRSMAKEMAGTVKEILG 134
Query: 274 TCVSVGCTVDGKDPKDLQQEIDDGEVEIPSA*R 176
TCVSVGCTVDGKDPKDLQQEIDDGEVEIPSA*R
Sbjct: 133 TCVSVGCTVDGKDPKDLQQEIDDGEVEIPSA*R 35
Score = 224 bits (484), Expect(2) = 2e-062
Identities = 101/130 (77%), Positives = 101/130 (77%)
Frame = +3 / +3
Query: 243 PSTVHPTLTQVPRISLTVPANSLAMDLFRMVLAISMTSSRLMLPLCXXXXXXXXXXXXXX 422
PSTVHPTLTQVPRISLTVPA SLAMDL MVLAIS TSSRLMLPLC
Sbjct: 102 PSTVHPTLTQVPRISLTVPAISLAMDLGLMVLAISTTSSRLMLPLCLMFLTFFLSLSGSL 281
Query: 423 XXXXXXXXXEGTTETLACRFCTVSLTVTRRPFQSLAVSLAMSSPIFFGERPSGPILGASD 602
EGTTETLAC FCTVSLTVTRRPFQSLAVSLAMSSPIFFGERPSGPILGA D
Sbjct: 282 SALMTSAAAEGTTETLACLFCTVSLTVTRRPFQSLAVSLAMSSPIFFGERPSGPILGARD 461
Query: 603 DAAPTSPPVT 632
DAAPTSPPVT
Sbjct: 462 DAAPTSPPVT 491
Score = 85.8 bits (181), Expect(2) = 1e-033
Identities = 39/58 (67%), Positives = 39/58 (67%)
Frame = -3 / -2
Query: 605 VVAGPQDRPARSLPEEXXXXXXXXXXXGLEGPPRHRQAHRAEPAGQGLRRPLRRGARH 432
VV G QDRPAR LPEE GLEGPPRHRQAH E AGQGLRR LRR ARH
Sbjct: 464 VVPGAQDRPARPLPEEDRRGHRQGDGQGLEGPPRHRQAHGTEQAGQGLRRALRRRARH 291
Score = 78.5 bits (165), Expect(2) = 1e-033
Identities = 34/48 (70%), Positives = 37/48 (77%)
Frame = -3 / -2
Query: 320 VHGQGVGRDRQGDPGDLRQRRVHRRWEGPQGLAAGDR*W*GRDPLSLK 177
VHGQG GR RQGDP LRQRR+HRR +GPQG A GD * GRDP+ LK
Sbjct: 179 VHGQGDGRHRQGDPRHLRQRRMHRRRQGPQGPATGD**RRGRDPIRLK 36
Score = 35.9 bits (72), Expect(2) = 2e-062
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = +1 / +1
Query: 178 FKLRGSRPHHHRSPAASPW 234
FK GSRP H+SP A PW
Sbjct: 37 FKRMGSRPRRHQSPVAGPW 93
>gb|CF757933.1|CF757933 DSAF1_25_B11.g1_A011 Drought-stressed after flowering Sorghum
bicolor cDNA clone DSAF1_25_B11_A011 3', mRNA sequence
Length = 580
Score = 340 bits (737), Expect(2) = 8e-094
Identities = 148/158 (93%), Positives = 153/158 (96%)
Frame = -1 / +2
Query: 619 EVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVSVVPSAAA 440
EVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVSVVPSAAA
Sbjct: 2 EVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVSVVPSAAA 181
Query: 439 LVIKALKEPERDRKKVKNIKHSGNISLDDVIEIAKTMRNRSMAKELAGTVKEILGTCVSV 260
LVIKALKEPERDRKKVKNIKHSGNISLDD++EIAKTMR RSMAKE+AGTVKEILGTCVSV
Sbjct: 182 LVIKALKEPERDRKKVKNIKHSGNISLDDIVEIAKTMRPRSMAKEMAGTVKEILGTCVSV 361
Query: 259 GCTVDGKDPKDLQQEIDDGEVEIPSA*RLYN*KSSDTI 146
GCTVDGKDPKDLQQEIDDGEVEIPSA*RL+N* T+
Sbjct: 362 GCTVDGKDPKDLQQEIDDGEVEIPSA*RLFN*GDHQTL 475
Score = 224 bits (483), Expect = 1e-057
Identities = 106/152 (69%), Positives = 106/152 (69%)
Frame = +3 / -2
Query: 165 *LYSL*AEXXXXXXXXXXXXXXXXXFPSTVHPTLTQVPRISLTVPANSLAMDLFRMVLAI 344
*L SL*AE PSTVHPTLTQVPRISLTVPA SLAMDL RMVLAI
Sbjct: 456 *LNSL*AEGISTSPSSISCCRSLGSLPSTVHPTLTQVPRISLTVPAISLAMDLGRMVLAI 277
Query: 345 SMTSSRLMLPLCXXXXXXXXXXXXXXXXXXXXXXXEGTTETLACRFCTVSLTVTRRPFQS 524
S SSRLMLPLC EGTTETLACRFCTVSLTVTRRPFQS
Sbjct: 276 STMSSRLMLPLCLMFLTFFLSLSGSLSALMTSAAAEGTTETLACRFCTVSLTVTRRPFQS 97
Query: 525 LAVSLAMSSPIFFGERPSGPILGASDDAAPTS 620
LAVSLAMSSPIFFGERPSGPILGASDDAAPTS
Sbjct: 96 LAVSLAMSSPIFFGERPSGPILGASDDAAPTS 1
Score = 105 bits (223), Expect(2) = 3e-046
Identities = 44/52 (84%), Positives = 45/52 (86%)
Frame = -3 / +1
Query: 320 VHGQGVGRDRQGDPGDLRQRRVHRRWEGPQGLAAGDR*W*GRDPLSLKAIQL 165
VHGQG GR RQGDP DLRQR VHR W+GPQG AAGDR*W*GRDPL LKAIQL
Sbjct: 301 VHGQGDGRHRQGDPRDLRQRWVHR*WQGPQGPAAGDR*W*GRDPLRLKAIQL 456
Score = 101 bits (215), Expect(2) = 3e-046
Identities = 45/58 (77%), Positives = 45/58 (77%)
Frame = -3 / +1
Query: 605 VVAGPQDRPARSLPEEXXXXXXXXXXXGLEGPPRHRQAHRAEPAGQGLRRPLRRGARH 432
VVAG QDRPARSLPEE GLEGPPRHRQAHRAEPAGQGLRR LRRGARH
Sbjct: 16 VVAGTQDRPARSLPEEDR*GHRQGDRQGLEGPPRHRQAHRAEPAGQGLRRALRRGARH 189
Score = 24.9 bits (48), Expect(2) = 8e-094
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = -2 / +1
Query: 135 FVPNAVPAPRSPIIVC 88
FVPNA+ P P +C
Sbjct: 484 FVPNAIFVPLDPAYIC 531
>gb|CW311468.1|CW311468 104_801_11470249_148_36282_015 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11470249, DNA
sequence
Length = 694
Score = 344 bits (745), Expect = 9e-094
Identities = 149/153 (97%), Positives = 152/153 (99%)
Frame = -1 / -3
Query: 634 RVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVSVV 455
RVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVSVV
Sbjct: 659 RVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVSVV 480
Query: 454 PSAAALVIKALKEPERDRKKVKNIKHSGNISLDDVIEIAKTMRNRSMAKELAGTVKEILG 275
PSAAALVIKALKEPERDRKKVKNIKHSGNISLDD++EIAKTMR RSMAKE+AGTVKEILG
Sbjct: 479 PSAAALVIKALKEPERDRKKVKNIKHSGNISLDDIVEIAKTMRPRSMAKEMAGTVKEILG 300
Query: 274 TCVSVGCTVDGKDPKDLQQEIDDGEVEIPSA*R 176
TCVSVGCTVDGKDPKDLQQEIDDGEVEIPSA*R
Sbjct: 299 TCVSVGCTVDGKDPKDLQQEIDDGEVEIPSA*R 201
Score = 231 bits (499), Expect = 7e-060
Identities = 107/152 (70%), Positives = 107/152 (70%)
Frame = +3 / +1
Query: 177 L*AEXXXXXXXXXXXXXXXXXFPSTVHPTLTQVPRISLTVPANSLAMDLFRMVLAISMTS 356
L*AE PSTVHPTLTQVPRISLTVPA SLAMDL RMVLAIS S
Sbjct: 202 L*AEGISTSPSSISCCRSLGSLPSTVHPTLTQVPRISLTVPAISLAMDLGRMVLAISTMS 381
Query: 357 SRLMLPLCXXXXXXXXXXXXXXXXXXXXXXXEGTTETLACRFCTVSLTVTRRPFQSLAVS 536
SRLMLPLC EGTTETLACRFCTVSLTVTRRPFQSLAVS
Sbjct: 382 SRLMLPLCLMFLTFFLSLSGSLSALMTSAAAEGTTETLACRFCTVSLTVTRRPFQSLAVS 561
Query: 537 LAMSSPIFFGERPSGPILGASDDAAPTSPPVT 632
LAMSSPIFFGERPSGPILGASDDAAPTSPPVT
Sbjct: 562 LAMSSPIFFGERPSGPILGASDDAAPTSPPVT 657
Score = 101 bits (215), Expect(2) = 7e-044
Identities = 45/58 (77%), Positives = 45/58 (77%)
Frame = -3 / -2
Query: 605 VVAGPQDRPARSLPEEXXXXXXXXXXXGLEGPPRHRQAHRAEPAGQGLRRPLRRGARH 432
VVAG QDRPARSLPEE GLEGPPRHRQAHRAEPAGQGLRR LRRGARH
Sbjct: 630 VVAGTQDRPARSLPEEDR*GHRQGDRQGLEGPPRHRQAHRAEPAGQGLRRALRRGARH 457
Score = 97.3 bits (206), Expect(2) = 7e-044
Identities = 40/48 (83%), Positives = 41/48 (85%)
Frame = -3 / -2
Query: 320 VHGQGVGRDRQGDPGDLRQRRVHRRWEGPQGLAAGDR*W*GRDPLSLK 177
VHGQG GR RQGDP DLRQR VHR W+GPQG AAGDR*W*GRDPL LK
Sbjct: 345 VHGQGDGRHRQGDPRDLRQRWVHR*WQGPQGPAAGDR*W*GRDPLRLK 202
>gb|CW310303.1|CW310303 104_799_11469644_116_35746_074 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11469644, DNA
sequence
Length = 645
Score = 342 bits (741), Expect = 3e-093
Identities = 149/152 (98%), Positives = 151/152 (99%)
Frame = -1 / -2
Query: 634 RVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVSVV 455
RVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVSVV
Sbjct: 566 RVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVSVV 387
Query: 454 PSAAALVIKALKEPERDRKKVKNIKHSGNISLDDVIEIAKTMRNRSMAKELAGTVKEILG 275
PSAAALVIKALKEPERDRKKVKNIKHSGNISLDDV+EIAKTMR RSMAKE+AGTVKEILG
Sbjct: 386 PSAAALVIKALKEPERDRKKVKNIKHSGNISLDDVVEIAKTMRPRSMAKEMAGTVKEILG 207
Query: 274 TCVSVGCTVDGKDPKDLQQEIDDGEVEIPSA* 179
TCVSVGCTVDGKDPKDLQQEIDDGEVEIPSA*
Sbjct: 206 TCVSVGCTVDGKDPKDLQQEIDDGEVEIPSA* 111
Score = 222 bits (479), Expect(2) = 8e-059
Identities = 101/130 (77%), Positives = 101/130 (77%)
Frame = +3 / +1
Query: 243 PSTVHPTLTQVPRISLTVPANSLAMDLFRMVLAISMTSSRLMLPLCXXXXXXXXXXXXXX 422
PSTVHPTLTQVPRISLTVPA SLAMDL MVLAIS TSSRLMLPLC
Sbjct: 175 PSTVHPTLTQVPRISLTVPAISLAMDLGLMVLAISTTSSRLMLPLCLMFLTFLRSLSGSL 354
Query: 423 XXXXXXXXXEGTTETLACRFCTVSLTVTRRPFQSLAVSLAMSSPIFFGERPSGPILGASD 602
EGTTETLACRF TVSLTVTRRPFQSLAVSLAMSSPIF GERPSGPILGASD
Sbjct: 355 SALMTSAAAEGTTETLACRFWTVSLTVTRRPFQSLAVSLAMSSPIFLGERPSGPILGASD 534
Query: 603 DAAPTSPPVT 632
DAAPTSPPVT
Sbjct: 535 DAAPTSPPVT 564
Score = 100 bits (214), Expect(2) = 2e-033
Identities = 43/58 (74%), Positives = 44/58 (75%)
Frame = -3 / -1
Query: 605 VVAGPQDRPARSLPEEXXXXXXXXXXXGLEGPPRHRQAHRAEPAGQGLRRPLRRGARH 432
VVAGPQDRPARSLP+E GLEGPPRHRQAHR EP GQGLRR LRRGARH
Sbjct: 537 VVAGPQDRPARSLPQEDRRGHRQGDGQGLEGPPRHRQAHRPEPTGQGLRRSLRRGARH 364
Score = 62.5 bits (130), Expect(2) = 2e-033
Identities = 30/54 (55%), Positives = 35/54 (64%)
Frame = -3 / -1
Query: 320 VHGQGVGRDRQGDPGDLRQRRVHRRWEGPQGLAAGDR*W*GRDPLSLKAIQLEI 159
VHGQG GR RQGD LRQ R+HRR +GPQG AAGD G D + L+ +I
Sbjct: 252 VHGQGNGRHRQGDSRHLRQCRMHRRRQGPQGPAAGD*RRRGGDTVRLRRYDEQI 91
Score = 26.3 bits (51), Expect(2) = 8e-059
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = +1 / +2
Query: 157 MISSCIAFKLRGSRPHHHRSPAASPW 234
+I S K S P +SPAA PW
Sbjct: 89 VICSSYLLKRTVSPPRRRQSPAAGPW 166
>gb|BG240279.1|BG240279 OV1_20_A11.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 548
Score = 339 bits (735), Expect = 2e-092
Identities = 146/150 (97%), Positives = 149/150 (99%)
Frame = -1 / +3
Query: 634 RVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVSVV 455
RVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVSVV
Sbjct: 99 RVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVSVV 278
Query: 454 PSAAALVIKALKEPERDRKKVKNIKHSGNISLDDVIEIAKTMRNRSMAKELAGTVKEILG 275
PSAAALVIKALKEPERDRKKVKNIKHSGNISLDD++EIAKTMR RSMAKE+AGTVKEILG
Sbjct: 279 PSAAALVIKALKEPERDRKKVKNIKHSGNISLDDIVEIAKTMRPRSMAKEMAGTVKEILG 458
Query: 274 TCVSVGCTVDGKDPKDLQQEIDDGEVEIPS 185
TCVSVGCTVDGKDPKDLQQEIDDGEVEIPS
Sbjct: 459 TCVSVGCTVDGKDPKDLQQEIDDGEVEIPS 548
Score = 230 bits (497), Expect(2) = 5e-067
Identities = 103/130 (79%), Positives = 103/130 (79%)
Frame = +3 / -2
Query: 243 PSTVHPTLTQVPRISLTVPANSLAMDLFRMVLAISMTSSRLMLPLCXXXXXXXXXXXXXX 422
PSTVHPTLTQVPRISLTVPA SLAMDL RMVLAIS SSRLMLPLC
Sbjct: 490 PSTVHPTLTQVPRISLTVPAISLAMDLGRMVLAISTMSSRLMLPLCLMFLTFFLSLSGSL 311
Query: 423 XXXXXXXXXEGTTETLACRFCTVSLTVTRRPFQSLAVSLAMSSPIFFGERPSGPILGASD 602
EGTTETLACRFCTVSLTVTRRPFQSLAVSLAMSSPIFFGERPSGPILGASD
Sbjct: 310 SALMTSAAAEGTTETLACRFCTVSLTVTRRPFQSLAVSLAMSSPIFFGERPSGPILGASD 131
Query: 603 DAAPTSPPVT 632
DAAPTSPPVT
Sbjct: 130 DAAPTSPPVT 101
Score = 101 bits (215), Expect(2) = 8e-043
Identities = 45/58 (77%), Positives = 45/58 (77%)
Frame = -3 / +2
Query: 605 VVAGPQDRPARSLPEEXXXXXXXXXXXGLEGPPRHRQAHRAEPAGQGLRRPLRRGARH 432
VVAG QDRPARSLPEE GLEGPPRHRQAHRAEPAGQGLRR LRRGARH
Sbjct: 128 VVAGTQDRPARSLPEEDR*GHRQGDRQGLEGPPRHRQAHRAEPAGQGLRRALRRGARH 301
Score = 93.6 bits (198), Expect(2) = 8e-043
Identities = 38/45 (84%), Positives = 39/45 (86%)
Frame = -3 / +2
Query: 320 VHGQGVGRDRQGDPGDLRQRRVHRRWEGPQGLAAGDR*W*GRDPL 186
VHGQG GR RQGDP DLRQR VHR W+GPQG AAGDR*W*GRDPL
Sbjct: 413 VHGQGDGRHRQGDPRDLRQRWVHR*WQGPQGPAAGDR*W*GRDPL 547
Score = 45.5 bits (93), Expect(2) = 5e-067
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = +1 / -3
Query: 187 RGSRPHHHRSPAASPW 234
RGSRPHHHRSPAA PW
Sbjct: 546 RGSRPHHHRSPAAGPW 499
>gb|AW924764.1|AW924764 WS1_72_G07.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 565
Score = 338 bits (733), Expect = 4e-092
Identities = 147/151 (97%), Positives = 149/151 (98%)
Frame = -1 / +1
Query: 634 RVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVSVV 455
RVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKG RVTVKLTVQNRQAKVSVV
Sbjct: 112 RVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGPRVTVKLTVQNRQAKVSVV 291
Query: 454 PSAAALVIKALKEPERDRKKVKNIKHSGNISLDDVIEIAKTMRNRSMAKELAGTVKEILG 275
PSAAALVIKALKEPERDRKKVKNIKHSGNISLDDV+EIAKTMR RSMAKE+AGTVKEILG
Sbjct: 292 PSAAALVIKALKEPERDRKKVKNIKHSGNISLDDVVEIAKTMRPRSMAKEMAGTVKEILG 471
Query: 274 TCVSVGCTVDGKDPKDLQQEIDDGEVEIPSA 182
TCVSVGCTVDGKDPKDLQQEIDDGEVEIPSA
Sbjct: 472 TCVSVGCTVDGKDPKDLQQEIDDGEVEIPSA 564
Score = 219 bits (472), Expect(2) = 3e-057
Identities = 100/130 (76%), Positives = 100/130 (76%)
Frame = +3 / -3
Query: 243 PSTVHPTLTQVPRISLTVPANSLAMDLFRMVLAISMTSSRLMLPLCXXXXXXXXXXXXXX 422
PSTVHPTLTQVPRISLTVPA SLAMDL MVLAIS TSSRLMLPLC
Sbjct: 503 PSTVHPTLTQVPRISLTVPAISLAMDLGLMVLAISTTSSRLMLPLCLMFLTFLRSLSGSL 324
Query: 423 XXXXXXXXXEGTTETLACRFCTVSLTVTRRPFQSLAVSLAMSSPIFFGERPSGPILGASD 602
EGTTETLACRF TVSLTVTR PFQSLAVSLAMSSPIF GERPSGPILGASD
Sbjct: 323 SALMTSAAAEGTTETLACRFWTVSLTVTRGPFQSLAVSLAMSSPIFLGERPSGPILGASD 144
Query: 603 DAAPTSPPVT 632
DAAPTSPPVT
Sbjct: 143 DAAPTSPPVT 114
Score = 100 bits (214), Expect(2) = 3e-033
Identities = 43/58 (74%), Positives = 44/58 (75%)
Frame = -3 / +3
Query: 605 VVAGPQDRPARSLPEEXXXXXXXXXXXGLEGPPRHRQAHRAEPAGQGLRRPLRRGARH 432
VVAGPQDRPARSLP+E GLEGPPRHRQAHR EP GQGLRR LRRGARH
Sbjct: 141 VVAGPQDRPARSLPQEDRRGHRQGDGQGLEGPPRHRQAHRPEPTGQGLRRSLRRGARH 314
Score = 62.0 bits (129), Expect(2) = 3e-033
Identities = 26/36 (72%), Positives = 28/36 (77%)
Frame = -3 / +3
Query: 320 VHGQGVGRDRQGDPGDLRQRRVHRRWEGPQGLAAGD 213
VHGQG GR RQGD LRQ R+HRR +GPQG AAGD
Sbjct: 426 VHGQGNGRHRQGDSRHLRQCRMHRRRQGPQGPAAGD 533
Score = 24.4 bits (47), Expect(2) = 3e-057
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +1 / -1
Query: 193 SRPHHHRSPAASPW 234
S P +SPAA PW
Sbjct: 553 SPPRRRQSPAAGPW 512
>gb|CD227917.1|CD227917 CCC1_56_G05.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_56_G05_A007 5', mRNA sequence
Length = 637
Score = 336 bits (729), Expect = 1e-091
Identities = 147/152 (96%), Positives = 149/152 (98%)
Frame = -1 / +1
Query: 634 RVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVSVV 455
RVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVSVV
Sbjct: 112 RVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVSVV 291
Query: 454 PSAAALVIKALKEPERDRKKVKNIKHSGNISLDDVIEIAKTMRNRSMAKELAGTVKEILG 275
PSAAALVIKALKEPERDRKKVKNIKHSGNISLDDV+EIAKTMR RSMAKE+AGTVKEILG
Sbjct: 292 PSAAALVIKALKEPERDRKKVKNIKHSGNISLDDVVEIAKTMRPRSMAKEMAGTVKEILG 471
Query: 274 TCVSVGCTVDGKDPKDLQQEIDDGEVEIPSA* 179
TCVSVGCTVDG DPKDLQQEIDDG VEIPSA*
Sbjct: 472 TCVSVGCTVDGXDPKDLQQEIDDGXVEIPSA* 567
Score = 222 bits (479), Expect(2) = 2e-058
Identities = 101/130 (77%), Positives = 101/130 (77%)
Frame = +3 / -3
Query: 243 PSTVHPTLTQVPRISLTVPANSLAMDLFRMVLAISMTSSRLMLPLCXXXXXXXXXXXXXX 422
PSTVHPTLTQVPRISLTVPA SLAMDL MVLAIS TSSRLMLPLC
Sbjct: 503 PSTVHPTLTQVPRISLTVPAISLAMDLGLMVLAISTTSSRLMLPLCLMFLTFLRSLSGSL 324
Query: 423 XXXXXXXXXEGTTETLACRFCTVSLTVTRRPFQSLAVSLAMSSPIFFGERPSGPILGASD 602
EGTTETLACRF TVSLTVTRRPFQSLAVSLAMSSPIF GERPSGPILGASD
Sbjct: 323 SALMTSAAAEGTTETLACRFWTVSLTVTRRPFQSLAVSLAMSSPIFLGERPSGPILGASD 144
Query: 603 DAAPTSPPVT 632
DAAPTSPPVT
Sbjct: 143 DAAPTSPPVT 114
Score = 100 bits (214), Expect(2) = 3e-033
Identities = 43/58 (74%), Positives = 44/58 (75%)
Frame = -3 / +3
Query: 605 VVAGPQDRPARSLPEEXXXXXXXXXXXGLEGPPRHRQAHRAEPAGQGLRRPLRRGARH 432
VVAGPQDRPARSLP+E GLEGPPRHRQAHR EP GQGLRR LRRGARH
Sbjct: 141 VVAGPQDRPARSLPQEDRRGHRQGDGQGLEGPPRHRQAHRPEPTGQGLRRSLRRGARH 314
Score = 62.0 bits (129), Expect(2) = 3e-033
Identities = 30/50 (60%), Positives = 33/50 (66%)
Frame = -3 / +3
Query: 320 VHGQGVGRDRQGDPGDLRQRRVHRRWEGPQGLAAGDR*W*GRDPLSLKAI 171
VHGQG GR RQGD LRQ R+HRR GPQG AAGD G D + L+ I
Sbjct: 426 VHGQGNGRHRQGDSRHLRQCRMHRRRXGPQGPAAGD*RRXGGDTVRLRRI 575
Score = 24.9 bits (48), Expect(2) = 2e-058
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = +1 / -1
Query: 172 IAFKLRGSRPHHHRSPAASPW 234
I K S P +SPAA PW
Sbjct: 574 ILLKRTVSPPXRRQSPAAGPW 512
>gb|CN124945.1|CN124945 RHOH1_7_H09.g1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_7_H09_A002 5', mRNA sequence
Length = 792
Score = 332 bits (719), Expect = 3e-090
Identities = 145/152 (95%), Positives = 148/152 (97%)
Frame = -1 / +2
Query: 634 RVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVSVV 455
RVTGGEVGAASSLAPKIGPLGLSPKKIGEDIA+ETAKDWKGLRVTVKLTVQNRQAKVSV
Sbjct: 269 RVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAEETAKDWKGLRVTVKLTVQNRQAKVSVG 448
Query: 454 PSAAALVIKALKEPERDRKKVKNIKHSGNISLDDVIEIAKTMRNRSMAKELAGTVKEILG 275
PSAAALVIKALKEPERDRKKVKNIKHSGNISLDDV+EIAKTMR RSMA E+AGTVKEILG
Sbjct: 449 PSAAALVIKALKEPERDRKKVKNIKHSGNISLDDVVEIAKTMRPRSMANEMAGTVKEILG 628
Query: 274 TCVSVGCTVDGKDPKDLQQEIDDGEVEIPSA* 179
TCVSVGCTVDGKDPKDLQQEIDD EVEIPSA*
Sbjct: 629 TCVSVGCTVDGKDPKDLQQEIDDSEVEIPSA* 724
Score = 216 bits (467), Expect(2) = 2e-056
Identities = 99/130 (76%), Positives = 99/130 (76%)
Frame = +3 / -1
Query: 243 PSTVHPTLTQVPRISLTVPANSLAMDLFRMVLAISMTSSRLMLPLCXXXXXXXXXXXXXX 422
PSTVHPTLTQVPRISLTVPA SLAMDL MVLAIS TSSRLMLPLC
Sbjct: 660 PSTVHPTLTQVPRISLTVPAISLAMDLGLMVLAISTTSSRLMLPLCLMFLTFLRSLSGSL 481
Query: 423 XXXXXXXXXEGTTETLACRFCTVSLTVTRRPFQSLAVSLAMSSPIFFGERPSGPILGASD 602
EG TETLACRF TVSLTVTRRPFQSLAVS AMSSPIF GERPSGPILGASD
Sbjct: 480 SALMTSAAAEGPTETLACRFWTVSLTVTRRPFQSLAVSSAMSSPIFLGERPSGPILGASD 301
Query: 603 DAAPTSPPVT 632
DAAPTSPPVT
Sbjct: 300 DAAPTSPPVT 271
Score = 100 bits (214), Expect(2) = 4e-032
Identities = 43/58 (74%), Positives = 44/58 (75%)
Frame = -3 / +1
Query: 605 VVAGPQDRPARSLPEEXXXXXXXXXXXGLEGPPRHRQAHRAEPAGQGLRRPLRRGARH 432
VVAGPQDRPARSLP+E GLEGPPRHRQAHR EP GQGLRR LRRGARH
Sbjct: 298 VVAGPQDRPARSLPQEDRRGHRRGDGQGLEGPPRHRQAHRPEPTGQGLRRSLRRGARH 471
Score = 58.3 bits (121), Expect(2) = 4e-032
Identities = 25/36 (69%), Positives = 27/36 (75%)
Frame = -3 / +1
Query: 320 VHGQGVGRDRQGDPGDLRQRRVHRRWEGPQGLAAGD 213
VHGQ GR RQGD LRQ R+HRR +GPQG AAGD
Sbjct: 583 VHGQRNGRHRQGDSRHLRQCRMHRRRQGPQGPAAGD 690
Score = 23.5 bits (45), Expect(2) = 2e-056
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = +1 / -2
Query: 172 IAFKLRGSRPHHHRSPAASPW 234
I K S P +SPAA PW
Sbjct: 731 ILXKRTVSPPRCRQSPAAGPW 669
>gb|AW672027.1|AW672027 LG1_354_A12.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 558
Score = 330 bits (715), Expect = 1e-089
Identities = 142/146 (97%), Positives = 145/146 (99%)
Frame = -1 / +3
Query: 634 RVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVSVV 455
RVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVSVV
Sbjct: 120 RVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVSVV 299
Query: 454 PSAAALVIKALKEPERDRKKVKNIKHSGNISLDDVIEIAKTMRNRSMAKELAGTVKEILG 275
PSAAALVIKALKEPERDRKKVKNIKHSGNISLDD++EIAKTMR RSMAKE+AGTVKEILG
Sbjct: 300 PSAAALVIKALKEPERDRKKVKNIKHSGNISLDDIVEIAKTMRPRSMAKEMAGTVKEILG 479
Query: 274 TCVSVGCTVDGKDPKDLQQEIDDGEV 197
TCVSVGCTVDGKDPKDLQQEIDDGEV
Sbjct: 480 TCVSVGCTVDGKDPKDLQQEIDDGEV 557
Score = 230 bits (497), Expect(2) = 6e-065
Identities = 103/130 (79%), Positives = 103/130 (79%)
Frame = +3 / -3
Query: 243 PSTVHPTLTQVPRISLTVPANSLAMDLFRMVLAISMTSSRLMLPLCXXXXXXXXXXXXXX 422
PSTVHPTLTQVPRISLTVPA SLAMDL RMVLAIS SSRLMLPLC
Sbjct: 511 PSTVHPTLTQVPRISLTVPAISLAMDLGRMVLAISTMSSRLMLPLCLMFLTFFLSLSGSL 332
Query: 423 XXXXXXXXXEGTTETLACRFCTVSLTVTRRPFQSLAVSLAMSSPIFFGERPSGPILGASD 602
EGTTETLACRFCTVSLTVTRRPFQSLAVSLAMSSPIFFGERPSGPILGASD
Sbjct: 331 SALMTSAAAEGTTETLACRFCTVSLTVTRRPFQSLAVSLAMSSPIFFGERPSGPILGASD 152
Query: 603 DAAPTSPPVT 632
DAAPTSPPVT
Sbjct: 151 DAAPTSPPVT 122
Score = 101 bits (215), Expect(2) = 9e-040
Identities = 45/58 (77%), Positives = 45/58 (77%)
Frame = -3 / +2
Query: 605 VVAGPQDRPARSLPEEXXXXXXXXXXXGLEGPPRHRQAHRAEPAGQGLRRPLRRGARH 432
VVAG QDRPARSLPEE GLEGPPRHRQAHRAEPAGQGLRR LRRGARH
Sbjct: 149 VVAGTQDRPARSLPEEDR*GHRQGDRQGLEGPPRHRQAHRAEPAGQGLRRALRRGARH 322
Score = 83.5 bits (176), Expect(2) = 9e-040
Identities = 34/41 (82%), Positives = 35/41 (85%)
Frame = -3 / +2
Query: 320 VHGQGVGRDRQGDPGDLRQRRVHRRWEGPQGLAAGDR*W*G 198
VHGQG GR RQGDP DLRQR VHR W+GPQG AAGDR*W*G
Sbjct: 434 VHGQGDGRHRQGDPRDLRQRWVHR*WQGPQGPAAGDR*W*G 556
Score = 38.6 bits (78), Expect(2) = 6e-065
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +1 / -1
Query: 196 RPHHHRSPAASPW 234
RPHHHRSPAA PW
Sbjct: 558 RPHHHRSPAAGPW 520
>gb|BG049446.1|BG049446 OV1_20_A11.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 608
Score = 322 bits (698), Expect(2) = 2e-088
Identities = 139/149 (93%), Positives = 144/149 (96%)
Frame = -1 / +3
Query: 592 PKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVSVVPSAAALVIKALKEP 413
PKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVSVVPSAAALVIKALKEP
Sbjct: 3 PKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVSVVPSAAALVIKALKEP 182
Query: 412 ERDRKKVKNIKHSGNISLDDVIEIAKTMRNRSMAKELAGTVKEILGTCVSVGCTVDGKDP 233
ERDRKKVKNIKHSGNISLDD++EIAKTMR RSMAKE+AGTVKEILGTCVSVGCTVDGKDP
Sbjct: 183 ERDRKKVKNIKHSGNISLDDIVEIAKTMRPRSMAKEMAGTVKEILGTCVSVGCTVDGKDP 362
Query: 232 KDLQQEIDDGEVEIPSA*RLYN*KSSDTI 146
KDLQQEIDDGEVEIPSA*RL+N* T+
Sbjct: 363 KDLQQEIDDGEVEIPSA*RLFN*GDHQTL 449
Score = 204 bits (439), Expect = 1e-051
Identities = 97/143 (67%), Positives = 97/143 (67%)
Frame = +3 / -2
Query: 165 *LYSL*AEXXXXXXXXXXXXXXXXXFPSTVHPTLTQVPRISLTVPANSLAMDLFRMVLAI 344
*L SL*AE PSTVHPTLTQVPRISLTVPA SLAMDL RMVLAI
Sbjct: 430 *LNSL*AEGISTSPSSISCCRSLGSLPSTVHPTLTQVPRISLTVPAISLAMDLGRMVLAI 251
Query: 345 SMTSSRLMLPLCXXXXXXXXXXXXXXXXXXXXXXXEGTTETLACRFCTVSLTVTRRPFQS 524
S SSRLMLPLC EGTTETLACRFCTVSLTVTRRPFQS
Sbjct: 250 STMSSRLMLPLCLMFLTFFLSLSGSLSALMTSAAAEGTTETLACRFCTVSLTVTRRPFQS 71
Query: 525 LAVSLAMSSPIFFGERPSGPILG 593
LAVSLAMSSPIFFGERPSGPILG
Sbjct: 70 LAVSLAMSSPIFFGERPSGPILG 2
Score = 105 bits (223), Expect(2) = 7e-044
Identities = 44/52 (84%), Positives = 45/52 (86%)
Frame = -3 / +2
Query: 320 VHGQGVGRDRQGDPGDLRQRRVHRRWEGPQGLAAGDR*W*GRDPLSLKAIQL 165
VHGQG GR RQGDP DLRQR VHR W+GPQG AAGDR*W*GRDPL LKAIQL
Sbjct: 275 VHGQGDGRHRQGDPRDLRQRWVHR*WQGPQGPAAGDR*W*GRDPLRLKAIQL 430
Score = 93.6 bits (198), Expect(2) = 7e-044
Identities = 41/53 (77%), Positives = 41/53 (77%)
Frame = -3 / +2
Query: 590 QDRPARSLPEEXXXXXXXXXXXGLEGPPRHRQAHRAEPAGQGLRRPLRRGARH 432
QDRPARSLPEE GLEGPPRHRQAHRAEPAGQGLRR LRRGARH
Sbjct: 5 QDRPARSLPEEDR*GHRQGDRQGLEGPPRHRQAHRAEPAGQGLRRALRRGARH 163
Score = 24.9 bits (48), Expect(2) = 2e-088
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = -2 / +2
Query: 135 FVPNAVPAPRSPIIVC 88
FVPNA+ P P +C
Sbjct: 458 FVPNAIFVPLDPAYIC 505
>gb|CW454044.1|CW454044 fsbb001f198e23k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f198e23, DNA
sequence
Length = 737
Score = 323 bits (700), Expect = 1e-087
Identities = 141/144 (97%), Positives = 143/144 (99%)
Frame = -1 / -3
Query: 610 AASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVSVVPSAAALVI 431
AASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVSVVPSAAALVI
Sbjct: 735 AASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVSVVPSAAALVI 556
Query: 430 KALKEPERDRKKVKNIKHSGNISLDDVIEIAKTMRNRSMAKELAGTVKEILGTCVSVGCT 251
KALKEPERDRKKVKNIKHSGNISLDDV+EIAKTMR RSMAKE+AGTVKEILGTCVSVGCT
Sbjct: 555 KALKEPERDRKKVKNIKHSGNISLDDVVEIAKTMRPRSMAKEMAGTVKEILGTCVSVGCT 376
Query: 250 VDGKDPKDLQQEIDDGEVEIPSA* 179
VDGKDPKDLQQEIDDGEVEIPSA*
Sbjct: 375 VDGKDPKDLQQEIDDGEVEIPSA* 304
Score = 204 bits (440), Expect(2) = 2e-053
Identities = 94/123 (76%), Positives = 94/123 (76%)
Frame = +3 / +2
Query: 243 PSTVHPTLTQVPRISLTVPANSLAMDLFRMVLAISMTSSRLMLPLCXXXXXXXXXXXXXX 422
PSTVHPTLTQVPRISLTVPA SLAMDL MVLAIS TSSRLMLPLC
Sbjct: 368 PSTVHPTLTQVPRISLTVPAISLAMDLGLMVLAISTTSSRLMLPLCLMFLTFLRSLSGSL 547
Query: 423 XXXXXXXXXEGTTETLACRFCTVSLTVTRRPFQSLAVSLAMSSPIFFGERPSGPILGASD 602
EGTTETLACRF TVSLTVTRRPFQSLAVSLAMSSPIF GERPSGPILGASD
Sbjct: 548 SALMTSAAAEGTTETLACRFWTVSLTVTRRPFQSLAVSLAMSSPIFLGERPSGPILGASD 727
Query: 603 DAA 611
DAA
Sbjct: 728 DAA 736
Score = 100 bits (214), Expect(2) = 2e-033
Identities = 43/58 (74%), Positives = 44/58 (75%)
Frame = -3 / -2
Query: 605 VVAGPQDRPARSLPEEXXXXXXXXXXXGLEGPPRHRQAHRAEPAGQGLRRPLRRGARH 432
VVAGPQDRPARSLP+E GLEGPPRHRQAHR EP GQGLRR LRRGARH
Sbjct: 730 VVAGPQDRPARSLPQEDRRGHRQGDGQGLEGPPRHRQAHRPEPTGQGLRRSLRRGARH 557
Score = 62.5 bits (130), Expect(2) = 2e-033
Identities = 30/54 (55%), Positives = 35/54 (64%)
Frame = -3 / -2
Query: 320 VHGQGVGRDRQGDPGDLRQRRVHRRWEGPQGLAAGDR*W*GRDPLSLKAIQLEI 159
VHGQG GR RQGD LRQ R+HRR +GPQG AAGD G D + L+ +I
Sbjct: 445 VHGQGNGRHRQGDSRHLRQCRMHRRRQGPQGPAAGD*RRRGGDTVRLRRYDEQI 284
Score = 26.3 bits (51), Expect(2) = 2e-053
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = +1 / +3
Query: 157 MISSCIAFKLRGSRPHHHRSPAASPW 234
+I S K S P +SPAA PW
Sbjct: 282 VICSSYLLKRTVSPPRRRQSPAAGPW 359
>gb|BG412792.1|BG412792 OV2_34_H04.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 510
Score = 309 bits (670), Expect = 2e-083
Identities = 134/137 (97%), Positives = 136/137 (99%)
Frame = -1 / +1
Query: 634 RVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVSVV 455
RVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVSVV
Sbjct: 100 RVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVSVV 279
Query: 454 PSAAALVIKALKEPERDRKKVKNIKHSGNISLDDVIEIAKTMRNRSMAKELAGTVKEILG 275
PSAAALVIKALKEPERDRKKVKNIKHSGNISLDDV+EIAKTMR RSMAKE+AGTVKEILG
Sbjct: 280 PSAAALVIKALKEPERDRKKVKNIKHSGNISLDDVVEIAKTMRPRSMAKEMAGTVKEILG 459
Query: 274 TCVSVGCTVDGKDPKDL 224
TCVSVGCTVDGKDPKDL
Sbjct: 460 TCVSVGCTVDGKDPKDL 510
Score = 222 bits (479), Expect = 4e-057
Identities = 101/130 (77%), Positives = 101/130 (77%)
Frame = +3 / -2
Query: 243 PSTVHPTLTQVPRISLTVPANSLAMDLFRMVLAISMTSSRLMLPLCXXXXXXXXXXXXXX 422
PSTVHPTLTQVPRISLTVPA SLAMDL MVLAIS TSSRLMLPLC
Sbjct: 491 PSTVHPTLTQVPRISLTVPAISLAMDLGLMVLAISTTSSRLMLPLCLMFLTFLRSLSGSL 312
Query: 423 XXXXXXXXXEGTTETLACRFCTVSLTVTRRPFQSLAVSLAMSSPIFFGERPSGPILGASD 602
EGTTETLACRF TVSLTVTRRPFQSLAVSLAMSSPIF GERPSGPILGASD
Sbjct: 311 SALMTSAAAEGTTETLACRFWTVSLTVTRRPFQSLAVSLAMSSPIFLGERPSGPILGASD 132
Query: 603 DAAPTSPPVT 632
DAAPTSPPVT
Sbjct: 131 DAAPTSPPVT 102
Score = 100 bits (214), Expect(2) = 6e-031
Identities = 43/58 (74%), Positives = 44/58 (75%)
Frame = -3 / +3
Query: 605 VVAGPQDRPARSLPEEXXXXXXXXXXXGLEGPPRHRQAHRAEPAGQGLRRPLRRGARH 432
VVAGPQDRPARSLP+E GLEGPPRHRQAHR EP GQGLRR LRRGARH
Sbjct: 129 VVAGPQDRPARSLPQEDRRGHRQGDGQGLEGPPRHRQAHRPEPTGQGLRRSLRRGARH 302
Score = 54.2 bits (112), Expect(2) = 6e-031
Identities = 22/31 (70%), Positives = 24/31 (77%)
Frame = -3 / +3
Query: 320 VHGQGVGRDRQGDPGDLRQRRVHRRWEGPQG 228
VHGQG GR RQGD LRQ R+HRR +GPQG
Sbjct: 414 VHGQGNGRHRQGDSRHLRQCRMHRRRQGPQG 506
>gb|BG158445.1|BG158445 FM1_60_F10.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 511
Score = 309 bits (669), Expect = 3e-083
Identities = 133/137 (97%), Positives = 136/137 (99%)
Frame = -1 / +1
Query: 634 RVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVSVV 455
RVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVSVV
Sbjct: 100 RVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVSVV 279
Query: 454 PSAAALVIKALKEPERDRKKVKNIKHSGNISLDDVIEIAKTMRNRSMAKELAGTVKEILG 275
PSAAALVIKALKEPERDRKKVKNIKHSGNISLDD++EIAKTMR RSMAKE+AGTVKEILG
Sbjct: 280 PSAAALVIKALKEPERDRKKVKNIKHSGNISLDDIVEIAKTMRPRSMAKEMAGTVKEILG 459
Query: 274 TCVSVGCTVDGKDPKDL 224
TCVSVGCTVDGKDPKDL
Sbjct: 460 TCVSVGCTVDGKDPKDL 510
Score = 230 bits (497), Expect = 1e-059
Identities = 103/130 (79%), Positives = 103/130 (79%)
Frame = +3 / -3
Query: 243 PSTVHPTLTQVPRISLTVPANSLAMDLFRMVLAISMTSSRLMLPLCXXXXXXXXXXXXXX 422
PSTVHPTLTQVPRISLTVPA SLAMDL RMVLAIS SSRLMLPLC
Sbjct: 491 PSTVHPTLTQVPRISLTVPAISLAMDLGRMVLAISTMSSRLMLPLCLMFLTFFLSLSGSL 312
Query: 423 XXXXXXXXXEGTTETLACRFCTVSLTVTRRPFQSLAVSLAMSSPIFFGERPSGPILGASD 602
EGTTETLACRFCTVSLTVTRRPFQSLAVSLAMSSPIFFGERPSGPILGASD
Sbjct: 311 SALMTSAAAEGTTETLACRFCTVSLTVTRRPFQSLAVSLAMSSPIFFGERPSGPILGASD 132
Query: 603 DAAPTSPPVT 632
DAAPTSPPVT
Sbjct: 131 DAAPTSPPVT 102
Score = 101 bits (215), Expect(2) = 3e-034
Identities = 45/58 (77%), Positives = 45/58 (77%)
Frame = -3 / +3
Query: 605 VVAGPQDRPARSLPEEXXXXXXXXXXXGLEGPPRHRQAHRAEPAGQGLRRPLRRGARH 432
VVAG QDRPARSLPEE GLEGPPRHRQAHRAEPAGQGLRR LRRGARH
Sbjct: 129 VVAGTQDRPARSLPEEDR*GHRQGDRQGLEGPPRHRQAHRAEPAGQGLRRALRRGARH 302
Score = 64.8 bits (135), Expect(2) = 3e-034
Identities = 25/31 (80%), Positives = 26/31 (83%)
Frame = -3 / +3
Query: 320 VHGQGVGRDRQGDPGDLRQRRVHRRWEGPQG 228
VHGQG GR RQGDP DLRQR VHR W+GPQG
Sbjct: 414 VHGQGDGRHRQGDPRDLRQRWVHR*WQGPQG 506
>gb|BE356582.1|BE356582 DG1_126_E06.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 526
Score = 307 bits (665), Expect = 9e-083
Identities = 132/136 (97%), Positives = 135/136 (99%)
Frame = -1 / +1
Query: 634 RVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVSVV 455
RVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVSVV
Sbjct: 118 RVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVSVV 297
Query: 454 PSAAALVIKALKEPERDRKKVKNIKHSGNISLDDVIEIAKTMRNRSMAKELAGTVKEILG 275
PSAAALVIKALKEPERDRKKVKNIKHSGNISLDD++EIAKTMR RSMAKE+AGTVKEILG
Sbjct: 298 PSAAALVIKALKEPERDRKKVKNIKHSGNISLDDIVEIAKTMRPRSMAKEMAGTVKEILG 477
Query: 274 TCVSVGCTVDGKDPKD 227
TCVSVGCTVDGKDPKD
Sbjct: 478 TCVSVGCTVDGKDPKD 525
Score = 230 bits (497), Expect = 1e-059
Identities = 103/130 (79%), Positives = 103/130 (79%)
Frame = +3 / -3
Query: 243 PSTVHPTLTQVPRISLTVPANSLAMDLFRMVLAISMTSSRLMLPLCXXXXXXXXXXXXXX 422
PSTVHPTLTQVPRISLTVPA SLAMDL RMVLAIS SSRLMLPLC
Sbjct: 509 PSTVHPTLTQVPRISLTVPAISLAMDLGRMVLAISTMSSRLMLPLCLMFLTFFLSLSGSL 330
Query: 423 XXXXXXXXXEGTTETLACRFCTVSLTVTRRPFQSLAVSLAMSSPIFFGERPSGPILGASD 602
EGTTETLACRFCTVSLTVTRRPFQSLAVSLAMSSPIFFGERPSGPILGASD
Sbjct: 329 SALMTSAAAEGTTETLACRFCTVSLTVTRRPFQSLAVSLAMSSPIFFGERPSGPILGASD 150
Query: 603 DAAPTSPPVT 632
DAAPTSPPVT
Sbjct: 149 DAAPTSPPVT 120
Score = 101 bits (215), Expect(2) = 3e-034
Identities = 45/58 (77%), Positives = 45/58 (77%)
Frame = -3 / +3
Query: 605 VVAGPQDRPARSLPEEXXXXXXXXXXXGLEGPPRHRQAHRAEPAGQGLRRPLRRGARH 432
VVAG QDRPARSLPEE GLEGPPRHRQAHRAEPAGQGLRR LRRGARH
Sbjct: 147 VVAGTQDRPARSLPEEDR*GHRQGDRQGLEGPPRHRQAHRAEPAGQGLRRALRRGARH 320
Score = 64.8 bits (135), Expect(2) = 3e-034
Identities = 25/31 (80%), Positives = 26/31 (83%)
Frame = -3 / +3
Query: 320 VHGQGVGRDRQGDPGDLRQRRVHRRWEGPQG 228
VHGQG GR RQGDP DLRQR VHR W+GPQG
Sbjct: 432 VHGQGDGRHRQGDPRDLRQRWVHR*WQGPQG 524
>gb|CF490031.1|CF490031 POL1_62_C01.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_62_C01_A002 3', mRNA sequence
Length = 585
Score = 301 bits (651), Expect(2) = 5e-082
Identities = 130/140 (92%), Positives = 135/140 (96%)
Frame = -1 / +3
Query: 565 PKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKVKN 386
PKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKVKN
Sbjct: 3 PKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKVKN 182
Query: 385 IKHSGNISLDDVIEIAKTMRNRSMAKELAGTVKEILGTCVSVGCTVDGKDPKDLQQEIDD 206
IKHSGNISLDD++EIAKTMR RSMAKE+AGTVKEILGTCVSVGCTVDGKDPKDLQQEIDD
Sbjct: 183 IKHSGNISLDDIVEIAKTMRPRSMAKEMAGTVKEILGTCVSVGCTVDGKDPKDLQQEIDD 362
Query: 205 GEVEIPSA*RLYN*KSSDTI 146
GEVEIPSA*RL+N* T+
Sbjct: 363 GEVEIPSA*RLFN*GDHQTL 422
Score = 182 bits (391), Expect = 6e-045
Identities = 88/134 (65%), Positives = 88/134 (65%)
Frame = +3 / -3
Query: 165 *LYSL*AEXXXXXXXXXXXXXXXXXFPSTVHPTLTQVPRISLTVPANSLAMDLFRMVLAI 344
*L SL*AE PSTVHPTLTQVPRISLTVPA SLAMDL RMVLAI
Sbjct: 403 *LNSL*AEGISTSPSSISCCRSLGSLPSTVHPTLTQVPRISLTVPAISLAMDLGRMVLAI 224
Query: 345 SMTSSRLMLPLCXXXXXXXXXXXXXXXXXXXXXXXEGTTETLACRFCTVSLTVTRRPFQS 524
S SSRLMLPLC EGTTETLACRFCTVSLTVTRRPFQS
Sbjct: 223 STMSSRLMLPLCLMFLTFFLSLSGSLSALMTSAAAEGTTETLACRFCTVSLTVTRRPFQS 44
Query: 525 LAVSLAMSSPIFFG 566
LAVSLAMSSPIFFG
Sbjct: 43 LAVSLAMSSPIFFG 2
Score = 105 bits (223), Expect(2) = 2e-038
Identities = 44/52 (84%), Positives = 45/52 (86%)
Frame = -3 / +2
Query: 320 VHGQGVGRDRQGDPGDLRQRRVHRRWEGPQGLAAGDR*W*GRDPLSLKAIQL 165
VHGQG GR RQGDP DLRQR VHR W+GPQG AAGDR*W*GRDPL LKAIQL
Sbjct: 248 VHGQGDGRHRQGDPRDLRQRWVHR*WQGPQGPAAGDR*W*GRDPLRLKAIQL 403
Score = 75.3 bits (158), Expect(2) = 2e-038
Identities = 33/45 (73%), Positives = 33/45 (73%)
Frame = -3 / +2
Query: 566 PEEXXXXXXXXXXXGLEGPPRHRQAHRAEPAGQGLRRPLRRGARH 432
PEE GLEGPPRHRQAHRAEPAGQGLRR LRRGARH
Sbjct: 2 PEEDR*GHRQGDRQGLEGPPRHRQAHRAEPAGQGLRRALRRGARH 136
Score = 24.9 bits (48), Expect(2) = 5e-082
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = -2 / +2
Query: 135 FVPNAVPAPRSPIIVC 88
FVPNA+ P P +C
Sbjct: 431 FVPNAIFVPLDPAYIC 478
>gb|CD226182.1|CD226182 CCC1_44_A04.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_44_A04_A007 3', mRNA sequence
Length = 623
Score = 297 bits (644), Expect(2) = 5e-081
Identities = 129/139 (92%), Positives = 134/139 (96%)
Frame = -1 / +1
Query: 562 KKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKVKNI 383
KKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKVKNI
Sbjct: 1 KKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKVKNI 180
Query: 382 KHSGNISLDDVIEIAKTMRNRSMAKELAGTVKEILGTCVSVGCTVDGKDPKDLQQEIDDG 203
KHSGNISLDD++EIAKTMR RSMAKE+AGTVKEILGTCVSVGCTVDGKDPKDLQQEIDDG
Sbjct: 181 KHSGNISLDDIVEIAKTMRPRSMAKEMAGTVKEILGTCVSVGCTVDGKDPKDLQQEIDDG 360
Query: 202 EVEIPSA*RLYN*KSSDTI 146
EVEIPSA*RL+N* T+
Sbjct: 361 EVEIPSA*RLFN*GDHQTL 417
Score = 176 bits (379), Expect = 3e-043
Identities = 86/132 (65%), Positives = 86/132 (65%)
Frame = +3 / -1
Query: 165 *LYSL*AEXXXXXXXXXXXXXXXXXFPSTVHPTLTQVPRISLTVPANSLAMDLFRMVLAI 344
*L SL*AE PSTVHPTLTQVPRISLTVPA SLAMDL RMVLAI
Sbjct: 398 *LNSL*AEGISTSPSSISCCRSLGSLPSTVHPTLTQVPRISLTVPAISLAMDLGRMVLAI 219
Query: 345 SMTSSRLMLPLCXXXXXXXXXXXXXXXXXXXXXXXEGTTETLACRFCTVSLTVTRRPFQS 524
S SSRLMLPLC EGTTETLACRFCTVSLTVTRRPFQS
Sbjct: 218 STMSSRLMLPLCLMFLTFFLSLSGSLSALMTSAAAEGTTETLACRFCTVSLTVTRRPFQS 39
Query: 525 LAVSLAMSSPIF 560
LAVSLAMSSPIF
Sbjct: 38 LAVSLAMSSPIF 3
Score = 105 bits (223), Expect(2) = 4e-038
Identities = 44/52 (84%), Positives = 45/52 (86%)
Frame = -3 / +3
Query: 320 VHGQGVGRDRQGDPGDLRQRRVHRRWEGPQGLAAGDR*W*GRDPLSLKAIQL 165
VHGQG GR RQGDP DLRQR VHR W+GPQG AAGDR*W*GRDPL LKAIQL
Sbjct: 243 VHGQGDGRHRQGDPRDLRQRWVHR*WQGPQGPAAGDR*W*GRDPLRLKAIQL 398
Score = 74.4 bits (156), Expect(2) = 4e-038
Identities = 29/30 (96%), Positives = 29/30 (96%)
Frame = -3 / +3
Query: 521 LEGPPRHRQAHRAEPAGQGLRRPLRRGARH 432
LEGPPRHRQAHRAEPAGQGLRR LRRGARH
Sbjct: 42 LEGPPRHRQAHRAEPAGQGLRRALRRGARH 131
Score = 24.9 bits (48), Expect(2) = 5e-081
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = -2 / +3
Query: 135 FVPNAVPAPRSPIIVC 88
FVPNA+ P P +C
Sbjct: 426 FVPNAIFVPLDPAYIC 473
>gb|AW565949.1|AW565949 LG1_354_A12.g1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 585
Score = 297 bits (644), Expect(2) = 5e-081
Identities = 129/139 (92%), Positives = 134/139 (96%)
Frame = -1 / +3
Query: 562 KKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKVKNI 383
KKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKVKNI
Sbjct: 3 KKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKVKNI 182
Query: 382 KHSGNISLDDVIEIAKTMRNRSMAKELAGTVKEILGTCVSVGCTVDGKDPKDLQQEIDDG 203
KHSGNISLDD++EIAKTMR RSMAKE+AGTVKEILGTCVSVGCTVDGKDPKDLQQEIDDG
Sbjct: 183 KHSGNISLDDIVEIAKTMRPRSMAKEMAGTVKEILGTCVSVGCTVDGKDPKDLQQEIDDG 362
Query: 202 EVEIPSA*RLYN*KSSDTI 146
EVEIPSA*RL+N* T+
Sbjct: 363 EVEIPSA*RLFN*GDHQTL 419
Score = 179 bits (385), Expect = 4e-044
Identities = 87/133 (65%), Positives = 87/133 (65%)
Frame = +3 / -3
Query: 165 *LYSL*AEXXXXXXXXXXXXXXXXXFPSTVHPTLTQVPRISLTVPANSLAMDLFRMVLAI 344
*L SL*AE PSTVHPTLTQVPRISLTVPA SLAMDL RMVLAI
Sbjct: 400 *LNSL*AEGISTSPSSISCCRSLGSLPSTVHPTLTQVPRISLTVPAISLAMDLGRMVLAI 221
Query: 345 SMTSSRLMLPLCXXXXXXXXXXXXXXXXXXXXXXXEGTTETLACRFCTVSLTVTRRPFQS 524
S SSRLMLPLC EGTTETLACRFCTVSLTVTRRPFQS
Sbjct: 220 STMSSRLMLPLCLMFLTFFLSLSGSLSALMTSAAAEGTTETLACRFCTVSLTVTRRPFQS 41
Query: 525 LAVSLAMSSPIFF 563
LAVSLAMSSPIFF
Sbjct: 40 LAVSLAMSSPIFF 2
Score = 105 bits (223), Expect(2) = 4e-038
Identities = 44/52 (84%), Positives = 45/52 (86%)
Frame = -3 / +2
Query: 320 VHGQGVGRDRQGDPGDLRQRRVHRRWEGPQGLAAGDR*W*GRDPLSLKAIQL 165
VHGQG GR RQGDP DLRQR VHR W+GPQG AAGDR*W*GRDPL LKAIQL
Sbjct: 245 VHGQGDGRHRQGDPRDLRQRWVHR*WQGPQGPAAGDR*W*GRDPLRLKAIQL 400
Score = 74.4 bits (156), Expect(2) = 4e-038
Identities = 29/30 (96%), Positives = 29/30 (96%)
Frame = -3 / +2
Query: 521 LEGPPRHRQAHRAEPAGQGLRRPLRRGARH 432
LEGPPRHRQAHRAEPAGQGLRR LRRGARH
Sbjct: 44 LEGPPRHRQAHRAEPAGQGLRRALRRGARH 133
Score = 24.9 bits (48), Expect(2) = 5e-081
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = -2 / +2
Query: 135 FVPNAVPAPRSPIIVC 88
FVPNA+ P P +C
Sbjct: 428 FVPNAIFVPLDPAYIC 475
>gb|AW925050.1|AW925050 WS1_74_G10.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 511
Score = 297 bits (644), Expect(2) = 5e-081
Identities = 129/139 (92%), Positives = 134/139 (96%)
Frame = -1 / +2
Query: 562 KKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKVKNI 383
KKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKVKNI
Sbjct: 11 KKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKVKNI 190
Query: 382 KHSGNISLDDVIEIAKTMRNRSMAKELAGTVKEILGTCVSVGCTVDGKDPKDLQQEIDDG 203
KHSGNISLDD++EIAKTMR RSMAKE+AGTVKEILGTCVSVGCTVDGKDPKDLQQEIDDG
Sbjct: 191 KHSGNISLDDIVEIAKTMRPRSMAKEMAGTVKEILGTCVSVGCTVDGKDPKDLQQEIDDG 370
Query: 202 EVEIPSA*RLYN*KSSDTI 146
EVEIPSA*RL+N* T+
Sbjct: 371 EVEIPSA*RLFN*GDHQTL 427
Score = 179 bits (385), Expect = 4e-044
Identities = 87/133 (65%), Positives = 87/133 (65%)
Frame = +3 / -2
Query: 165 *LYSL*AEXXXXXXXXXXXXXXXXXFPSTVHPTLTQVPRISLTVPANSLAMDLFRMVLAI 344
*L SL*AE PSTVHPTLTQVPRISLTVPA SLAMDL RMVLAI
Sbjct: 408 *LNSL*AEGISTSPSSISCCRSLGSLPSTVHPTLTQVPRISLTVPAISLAMDLGRMVLAI 229
Query: 345 SMTSSRLMLPLCXXXXXXXXXXXXXXXXXXXXXXXEGTTETLACRFCTVSLTVTRRPFQS 524
S SSRLMLPLC EGTTETLACRFCTVSLTVTRRPFQS
Sbjct: 228 STMSSRLMLPLCLMFLTFFLSLSGSLSALMTSAAAEGTTETLACRFCTVSLTVTRRPFQS 49
Query: 525 LAVSLAMSSPIFF 563
LAVSLAMSSPIFF
Sbjct: 48 LAVSLAMSSPIFF 10
Score = 105 bits (223), Expect(2) = 4e-038
Identities = 44/52 (84%), Positives = 45/52 (86%)
Frame = -3 / +1
Query: 320 VHGQGVGRDRQGDPGDLRQRRVHRRWEGPQGLAAGDR*W*GRDPLSLKAIQL 165
VHGQG GR RQGDP DLRQR VHR W+GPQG AAGDR*W*GRDPL LKAIQL
Sbjct: 253 VHGQGDGRHRQGDPRDLRQRWVHR*WQGPQGPAAGDR*W*GRDPLRLKAIQL 408
Score = 74.4 bits (156), Expect(2) = 4e-038
Identities = 29/30 (96%), Positives = 29/30 (96%)
Frame = -3 / +1
Query: 521 LEGPPRHRQAHRAEPAGQGLRRPLRRGARH 432
LEGPPRHRQAHRAEPAGQGLRR LRRGARH
Sbjct: 52 LEGPPRHRQAHRAEPAGQGLRRALRRGARH 141
Score = 24.9 bits (48), Expect(2) = 5e-081
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = -2 / +1
Query: 135 FVPNAVPAPRSPIIVC 88
FVPNA+ P P +C
Sbjct: 436 FVPNAIFVPLDPAYIC 483
>gb|AW746435.1|AW746435 WS1_53_G03.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 498
Score = 294 bits (637), Expect = 7e-079
Identities = 128/131 (97%), Positives = 130/131 (99%)
Frame = -1 / +1
Query: 634 RVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVSVV 455
RVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVSVV
Sbjct: 106 RVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVSVV 285
Query: 454 PSAAALVIKALKEPERDRKKVKNIKHSGNISLDDVIEIAKTMRNRSMAKELAGTVKEILG 275
PSAAALVIKALKEPERDRKKVKNIKHSGNISLDDV+EIAKTMR RSMAKE+AGTVKEILG
Sbjct: 286 PSAAALVIKALKEPERDRKKVKNIKHSGNISLDDVVEIAKTMRPRSMAKEMAGTVKEILG 465
Query: 274 TCVSVGCTVDG 242
TCVSVGCTVDG
Sbjct: 466 TCVSVGCTVDG 498
Score = 222 bits (479), Expect = 4e-057
Identities = 101/130 (77%), Positives = 101/130 (77%)
Frame = +3 / -2
Query: 243 PSTVHPTLTQVPRISLTVPANSLAMDLFRMVLAISMTSSRLMLPLCXXXXXXXXXXXXXX 422
PSTVHPTLTQVPRISLTVPA SLAMDL MVLAIS TSSRLMLPLC
Sbjct: 497 PSTVHPTLTQVPRISLTVPAISLAMDLGLMVLAISTTSSRLMLPLCLMFLTFLRSLSGSL 318
Query: 423 XXXXXXXXXEGTTETLACRFCTVSLTVTRRPFQSLAVSLAMSSPIFFGERPSGPILGASD 602
EGTTETLACRF TVSLTVTRRPFQSLAVSLAMSSPIF GERPSGPILGASD
Sbjct: 317 SALMTSAAAEGTTETLACRFWTVSLTVTRRPFQSLAVSLAMSSPIFLGERPSGPILGASD 138
Query: 603 DAAPTSPPVT 632
DAAPTSPPVT
Sbjct: 137 DAAPTSPPVT 108
Score = 100 bits (214), Expect(2) = 9e-028
Identities = 43/58 (74%), Positives = 44/58 (75%)
Frame = -3 / +3
Query: 605 VVAGPQDRPARSLPEEXXXXXXXXXXXGLEGPPRHRQAHRAEPAGQGLRRPLRRGARH 432
VVAGPQDRPARSLP+E GLEGPPRHRQAHR EP GQGLRR LRRGARH
Sbjct: 135 VVAGPQDRPARSLPQEDRRGHRQGDGQGLEGPPRHRQAHRPEPTGQGLRRSLRRGARH 308
Score = 43.7 bits (89), Expect(2) = 9e-028
Identities = 18/25 (72%), Positives = 19/25 (76%)
Frame = -3 / +3
Query: 320 VHGQGVGRDRQGDPGDLRQRRVHRR 246
VHGQG GR RQGD LRQ R+HRR
Sbjct: 420 VHGQGNGRHRQGDSRHLRQCRMHRR 494
>gb|CN124864.1|CN124864 RHOH1_7_H09.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_7_H09_A002 3', mRNA sequence
Length = 598
Score = 293 bits (635), Expect = 1e-078
Identities = 127/132 (96%), Positives = 130/132 (98%)
Frame = -1 / +2
Query: 574 GLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKK 395
GLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVSVVPSA ALVIKALKEPERDRKK
Sbjct: 2 GLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVSVVPSAGALVIKALKEPERDRKK 181
Query: 394 VKNIKHSGNISLDDVIEIAKTMRNRSMAKELAGTVKEILGTCVSVGCTVDGKDPKDLQQE 215
VKNIKHSGNISLD+V+EIAKTMR RSMAKE+AGTVKEILGTCVSVGCTVDGKDPKDLQQE
Sbjct: 182 VKNIKHSGNISLDEVVEIAKTMRPRSMAKEMAGTVKEILGTCVSVGCTVDGKDPKDLQQE 361
Query: 214 IDDGEVEIPSA* 179
IDDGEVEIPSA*
Sbjct: 362 IDDGEVEIPSA* 397
Score = 176 bits (379), Expect(2) = 8e-045
Identities = 82/111 (73%), Positives = 82/111 (73%)
Frame = +3 / -2
Query: 243 PSTVHPTLTQVPRISLTVPANSLAMDLFRMVLAISMTSSRLMLPLCXXXXXXXXXXXXXX 422
PSTVHPTLTQVPRISLTVPA SLAMDL MVLAIS TSSRLMLPLC
Sbjct: 333 PSTVHPTLTQVPRISLTVPAISLAMDLGLMVLAISTTSSRLMLPLCLMFLTFLRSLSGSL 154
Query: 423 XXXXXXXXXEGTTETLACRFCTVSLTVTRRPFQSLAVSLAMSSPIFFGERP 575
EGTTETLACRF TVSLTVTRRPFQSLAVSLAMSSPIF GERP
Sbjct: 153 SALMTSAPAEGTTETLACRFWTVSLTVTRRPFQSLAVSLAMSSPIFLGERP 1
Score = 68.0 bits (142), Expect(2) = 8e-024
Identities = 30/48 (62%), Positives = 31/48 (64%)
Frame = -3 / +1
Query: 575 RSLPEEXXXXXXXXXXXGLEGPPRHRQAHRAEPAGQGLRRPLRRGARH 432
RSLP+E GLEGPP HRQAHR EP GQG RR LRRGA H
Sbjct: 1 RSLPQEDWRGHRQGDGQGLEGPPGHRQAHRPEPTGQGFRRSLRRGACH 144
Score = 63.4 bits (132), Expect(2) = 8e-024
Identities = 30/50 (60%), Positives = 34/50 (68%)
Frame = -3 / +1
Query: 320 VHGQGVGRDRQGDPGDLRQRRVHRRWEGPQGLAAGDR*W*GRDPLSLKAI 171
VHGQG GR RQGD LRQ R+HRR +GPQG AAGD G D + L+ I
Sbjct: 256 VHGQGNGRHRQGDSRHLRQCRMHRRRQGPQGPAAGD*RRRGGDTVRLRRI 405
Score = 25.4 bits (49), Expect(2) = 8e-045
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = +1 / -3
Query: 172 IAFKLRGSRPHHHRSPAASPW 234
I K S P +SPAA PW
Sbjct: 404 ILLKRTVSPPRRRQSPAAGPW 342
>gb|CW129319.1|CW129319 104_511_11114493_148_34762_091 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11114493, DNA
sequence
Length = 665
Score = 292 bits (631), Expect = 5e-078
Identities = 127/130 (97%), Positives = 129/130 (99%)
Frame = -1 / -2
Query: 634 RVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVSVV 455
RVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVSVV
Sbjct: 391 RVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVSVV 212
Query: 454 PSAAALVIKALKEPERDRKKVKNIKHSGNISLDDVIEIAKTMRNRSMAKELAGTVKEILG 275
PSAAALVIKALKEPERDRKKVKNIKHSGNISLDDV+EIAKTMR RSMAKE+AGTVKEILG
Sbjct: 211 PSAAALVIKALKEPERDRKKVKNIKHSGNISLDDVVEIAKTMRPRSMAKEMAGTVKEILG 32
Query: 274 TCVSVGCTVD 245
TCVSVGCTVD
Sbjct: 31 TCVSVGCTVD 2
Score = 219 bits (472), Expect = 4e-056
Identities = 100/129 (77%), Positives = 100/129 (77%)
Frame = +3 / +3
Query: 246 STVHPTLTQVPRISLTVPANSLAMDLFRMVLAISMTSSRLMLPLCXXXXXXXXXXXXXXX 425
STVHPTLTQVPRISLTVPA SLAMDL MVLAIS TSSRLMLPLC
Sbjct: 3 STVHPTLTQVPRISLTVPAISLAMDLGLMVLAISTTSSRLMLPLCLMFLTFLRSLSGSLS 182
Query: 426 XXXXXXXXEGTTETLACRFCTVSLTVTRRPFQSLAVSLAMSSPIFFGERPSGPILGASDD 605
EGTTETLACRF TVSLTVTRRPFQSLAVSLAMSSPIF GERPSGPILGASDD
Sbjct: 183 ALMTSAAAEGTTETLACRFWTVSLTVTRRPFQSLAVSLAMSSPIFLGERPSGPILGASDD 362
Query: 606 AAPTSPPVT 632
AAPTSPPVT
Sbjct: 363 AAPTSPPVT 389
Score = 100 bits (214), Expect(2) = 9e-028
Identities = 43/58 (74%), Positives = 44/58 (75%)
Frame = -3 / -1
Query: 605 VVAGPQDRPARSLPEEXXXXXXXXXXXGLEGPPRHRQAHRAEPAGQGLRRPLRRGARH 432
VVAGPQDRPARSLP+E GLEGPPRHRQAHR EP GQGLRR LRRGARH
Sbjct: 362 VVAGPQDRPARSLPQEDRRGHRQGDGQGLEGPPRHRQAHRPEPTGQGLRRSLRRGARH 189
Score = 43.7 bits (89), Expect(2) = 9e-028
Identities = 18/25 (72%), Positives = 19/25 (76%)
Frame = -3 / -1
Query: 320 VHGQGVGRDRQGDPGDLRQRRVHRR 246
VHGQG GR RQGD LRQ R+HRR
Sbjct: 77 VHGQGNGRHRQGDSRHLRQCRMHRR 3
>gb|CD227698.1|CD227698 CCC1_53_B08.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_53_B08_A007 3', mRNA sequence
Length = 592
Score = 291 bits (629), Expect = 9e-078
Identities = 126/129 (97%), Positives = 128/129 (99%)
Frame = -1 / +3
Query: 565 PKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKVKN 386
PKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKVKN
Sbjct: 3 PKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKVKN 182
Query: 385 IKHSGNISLDDVIEIAKTMRNRSMAKELAGTVKEILGTCVSVGCTVDGKDPKDLQQEIDD 206
IKHSGNISLDDV+EIAKTMR RSMAKE+AGTVKEILGTCVSVGCTVDGKDPKDLQQEIDD
Sbjct: 183 IKHSGNISLDDVVEIAKTMRPRSMAKEMAGTVKEILGTCVSVGCTVDGKDPKDLQQEIDD 362
Query: 205 GEVEIPSA* 179
GEVEIPSA*
Sbjct: 363 GEVEIPSA* 389
Score = 169 bits (364), Expect(2) = 8e-043
Identities = 79/108 (73%), Positives = 79/108 (73%)
Frame = +3 / -1
Query: 243 PSTVHPTLTQVPRISLTVPANSLAMDLFRMVLAISMTSSRLMLPLCXXXXXXXXXXXXXX 422
PSTVHPTLTQVPRISLTVPA SLAMDL MVLAIS TSSRLMLPLC
Sbjct: 325 PSTVHPTLTQVPRISLTVPAISLAMDLGLMVLAISTTSSRLMLPLCLMFLTFLRSLSGSL 146
Query: 423 XXXXXXXXXEGTTETLACRFCTVSLTVTRRPFQSLAVSLAMSSPIFFG 566
EGTTETLACRF TVSLTVTRRPFQSLAVSLAMSSPIF G
Sbjct: 145 SALMTSAAAEGTTETLACRFWTVSLTVTRRPFQSLAVSLAMSSPIFLG 2
Score = 71.2 bits (149), Expect(2) = 9e-025
Identities = 30/45 (66%), Positives = 31/45 (68%)
Frame = -3 / +2
Query: 566 PEEXXXXXXXXXXXGLEGPPRHRQAHRAEPAGQGLRRPLRRGARH 432
P+E GLEGPPRHRQAHR EP GQGLRR LRRGARH
Sbjct: 2 PQEDRRGHRQGDGQGLEGPPRHRQAHRPEPTGQGLRRSLRRGARH 136
Score = 63.4 bits (132), Expect(2) = 9e-025
Identities = 30/50 (60%), Positives = 34/50 (68%)
Frame = -3 / +2
Query: 320 VHGQGVGRDRQGDPGDLRQRRVHRRWEGPQGLAAGDR*W*GRDPLSLKAI 171
VHGQG GR RQGD LRQ R+HRR +GPQG AAGD G D + L+ I
Sbjct: 248 VHGQGNGRHRQGDSRHLRQCRMHRRRQGPQGPAAGD*RRRGGDTVRLRRI 397
Score = 25.4 bits (49), Expect(2) = 8e-043
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = +1 / -2
Query: 172 IAFKLRGSRPHHHRSPAASPW 234
I K S P +SPAA PW
Sbjct: 396 ILLKRTVSPPRRRQSPAAGPW 334
>gb|CF490113.1|CF490113 POL1_62_C01.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_62_C01_A002 5', mRNA sequence
Length = 715
Score = 201 bits (434), Expect(4) = 2e-077
Identities = 88/88 (100%), Positives = 88/88 (100%)
Frame = -1 / +3
Query: 634 RVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVSVV 455
RVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVSVV
Sbjct: 114 RVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVSVV 293
Query: 454 PSAAALVIKALKEPERDRKKVKNIKHSG 371
PSAAALVIKALKEPERDRKKVKNIKHSG
Sbjct: 294 PSAAALVIKALKEPERDRKKVKNIKHSG 377
Score = 149 bits (320), Expect(4) = 1e-051
Identities = 64/87 (73%), Positives = 64/87 (73%)
Frame = +3 / -1
Query: 372 PLCXXXXXXXXXXXXXXXXXXXXXXXEGTTETLACRFCTVSLTVTRRPFQSLAVSLAMSS 551
PLC EGTTETLACRFCTVSLTVTRRPFQSLAVSLAMSS
Sbjct: 376 PLCLMFLTFFLSLSGSLSALMTSAAAEGTTETLACRFCTVSLTVTRRPFQSLAVSLAMSS 197
Query: 552 PIFFGERPSGPILGASDDAAPTSPPVT 632
PIFFGERPSGPILGASDDAAPTSPPVT
Sbjct: 196 PIFFGERPSGPILGASDDAAPTSPPVT 116
Score = 101 bits (215), Expect(2) = 8e-039
Identities = 45/58 (77%), Positives = 45/58 (77%)
Frame = -3 / +2
Query: 605 VVAGPQDRPARSLPEEXXXXXXXXXXXGLEGPPRHRQAHRAEPAGQGLRRPLRRGARH 432
VVAG QDRPARSLPEE GLEGPPRHRQAHRAEPAGQGLRR LRRGARH
Sbjct: 143 VVAGTQDRPARSLPEEDR*GHRQGDRQGLEGPPRHRQAHRAEPAGQGLRRALRRGARH 316
Score = 94.5 bits (200), Expect(4) = 2e-077
Identities = 38/39 (97%), Positives = 39/39 (100%)
Frame = -1 / +2
Query: 319 SMAKELAGTVKEILGTCVSVGCTVDGKDPKDLQQEIDDG 203
SMAKE+AGTVKEILGTCVSVGCTVDGKDPKDLQQEIDDG
Sbjct: 437 SMAKEMAGTVKEILGTCVSVGCTVDGKDPKDLQQEIDDG 553
Score = 80.3 bits (169), Expect(2) = 8e-039
Identities = 32/39 (82%), Positives = 33/39 (84%)
Frame = -3 / +1
Query: 320 VHGQGVGRDRQGDPGDLRQRRVHRRWEGPQGLAAGDR*W 204
VHGQG GR RQGDP DLRQR VHR W+GPQG AAGDR*W
Sbjct: 436 VHGQGDGRHRQGDPRDLRQRWVHR*WQGPQGPAAGDR*W 552
Score = 58.8 bits (122), Expect(4) = 1e-051
Identities = 25/26 (96%), Positives = 25/26 (96%)
Frame = +3 / -2
Query: 243 PSTVHPTLTQVPRISLTVPANSLAMD 320
PSTVHPTLTQVPRISLTVPA SLAMD
Sbjct: 513 PSTVHPTLTQVPRISLTVPAISLAMD 436
Score = 29.5 bits (58), Expect(4) = 1e-051
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +1 / -3
Query: 205 HHRSPAASPW 234
HHRSPAA PW
Sbjct: 551 HHRSPAAGPW 522
Score = 27.2 bits (53), Expect(4) = 2e-077
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = -3 / +2
Query: 200 GRDPLSLKAIQL 165
GRDPL LKAIQL
Sbjct: 557 GRDPLRLKAIQL 592
Score = 24.9 bits (48), Expect(4) = 2e-077
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = -2 / +2
Query: 135 FVPNAVPAPRSPIIVC 88
FVPNA+ P P +C
Sbjct: 620 FVPNAIFVPLDPAYIC 667
Score = 23.1 bits (44), Expect(4) = 1e-051
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +1 / -2
Query: 172 IAFKLRGSRP 201
IAFK RGSRP
Sbjct: 585 IAFKRRGSRP 556
>gb|CW454043.1|CW454043 fsbb001f198e23f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f198e23, DNA
sequence
Length = 718
Score = 287 bits (621), Expect = 1e-076
Identities = 125/128 (97%), Positives = 127/128 (99%)
Frame = -1 / +3
Query: 634 RVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVSVV 455
RVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVSVV
Sbjct: 333 RVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVSVV 512
Query: 454 PSAAALVIKALKEPERDRKKVKNIKHSGNISLDDVIEIAKTMRNRSMAKELAGTVKEILG 275
PSAAALVIKALKEPERDRKKVKNIKHSGNISLDDV+EIAKTMR RSMAKE+AGTVKEILG
Sbjct: 513 PSAAALVIKALKEPERDRKKVKNIKHSGNISLDDVVEIAKTMRPRSMAKEMAGTVKEILG 692
Query: 274 TCVSVGCT 251
TCVSVGCT
Sbjct: 693 TCVSVGCT 716
Score = 217 bits (468), Expect = 1e-055
Identities = 99/128 (77%), Positives = 99/128 (77%)
Frame = +3 / -1
Query: 249 TVHPTLTQVPRISLTVPANSLAMDLFRMVLAISMTSSRLMLPLCXXXXXXXXXXXXXXXX 428
TVHPTLTQVPRISLTVPA SLAMDL MVLAIS TSSRLMLPLC
Sbjct: 718 TVHPTLTQVPRISLTVPAISLAMDLGLMVLAISTTSSRLMLPLCLMFLTFLRSLSGSLSA 539
Query: 429 XXXXXXXEGTTETLACRFCTVSLTVTRRPFQSLAVSLAMSSPIFFGERPSGPILGASDDA 608
EGTTETLACRF TVSLTVTRRPFQSLAVSLAMSSPIF GERPSGPILGASDDA
Sbjct: 538 LMTSAAAEGTTETLACRFWTVSLTVTRRPFQSLAVSLAMSSPIFLGERPSGPILGASDDA 359
Query: 609 APTSPPVT 632
APTSPPVT
Sbjct: 358 APTSPPVT 335
Score = 100 bits (214), Expect(2) = 4e-027
Identities = 43/58 (74%), Positives = 44/58 (75%)
Frame = -3 / +2
Query: 605 VVAGPQDRPARSLPEEXXXXXXXXXXXGLEGPPRHRQAHRAEPAGQGLRRPLRRGARH 432
VVAGPQDRPARSLP+E GLEGPPRHRQAHR EP GQGLRR LRRGARH
Sbjct: 362 VVAGPQDRPARSLPQEDRRGHRQGDGQGLEGPPRHRQAHRPEPTGQGLRRSLRRGARH 535
Score = 41.4 bits (84), Expect(2) = 4e-027
Identities = 17/24 (70%), Positives = 18/24 (75%)
Frame = -3 / +2
Query: 320 VHGQGVGRDRQGDPGDLRQRRVHR 249
VHGQG GR RQGD LRQ R+HR
Sbjct: 647 VHGQGNGRHRQGDSRHLRQCRMHR 718
>gb|AW747659.1|AW747659 WS1_74_G10.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 555
Score = 277 bits (600), Expect(2) = 5e-075
Identities = 120/130 (92%), Positives = 125/130 (96%)
Frame = -1 / +3
Query: 535 ETAKDWKGLRVTVKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKVKNIKHSGNISLD 356
ETAKDWKGLRVTVKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKVKNIKHSGNISLD
Sbjct: 3 ETAKDWKGLRVTVKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKVKNIKHSGNISLD 182
Query: 355 DVIEIAKTMRNRSMAKELAGTVKEILGTCVSVGCTVDGKDPKDLQQEIDDGEVEIPSA*R 176
D++EIAKTMR RSMAKE+AGTVKEILGTCVSVGCTVDGKDPKDLQQEIDDGEVEIPSA*R
Sbjct: 183 DIVEIAKTMRPRSMAKEMAGTVKEILGTCVSVGCTVDGKDPKDLQQEIDDGEVEIPSA*R 362
Query: 175 LYN*KSSDTI 146
L+N* T+
Sbjct: 363 LFN*GDHQTL 392
Score = 159 bits (341), Expect = 5e-038
Identities = 78/124 (62%), Positives = 78/124 (62%)
Frame = +3 / -3
Query: 165 *LYSL*AEXXXXXXXXXXXXXXXXXFPSTVHPTLTQVPRISLTVPANSLAMDLFRMVLAI 344
*L SL*AE PSTVHPTLTQVPRISLTVPA SLAMDL RMVLAI
Sbjct: 373 *LNSL*AEGISTSPSSISCCRSLGSLPSTVHPTLTQVPRISLTVPAISLAMDLGRMVLAI 194
Query: 345 SMTSSRLMLPLCXXXXXXXXXXXXXXXXXXXXXXXEGTTETLACRFCTVSLTVTRRPFQS 524
S SSRLMLPLC EGTTETLACRFCTVSLTVTRRPFQS
Sbjct: 193 STMSSRLMLPLCLMFLTFFLSLSGSLSALMTSAAAEGTTETLACRFCTVSLTVTRRPFQS 14
Query: 525 LAVS 536
LAVS
Sbjct: 13 LAVS 2
Score = 105 bits (223), Expect(2) = 4e-038
Identities = 44/52 (84%), Positives = 45/52 (86%)
Frame = -3 / +2
Query: 320 VHGQGVGRDRQGDPGDLRQRRVHRRWEGPQGLAAGDR*W*GRDPLSLKAIQL 165
VHGQG GR RQGDP DLRQR VHR W+GPQG AAGDR*W*GRDPL LKAIQL
Sbjct: 218 VHGQGDGRHRQGDPRDLRQRWVHR*WQGPQGPAAGDR*W*GRDPLRLKAIQL 373
Score = 74.4 bits (156), Expect(2) = 4e-038
Identities = 29/30 (96%), Positives = 29/30 (96%)
Frame = -3 / +2
Query: 521 LEGPPRHRQAHRAEPAGQGLRRPLRRGARH 432
LEGPPRHRQAHRAEPAGQGLRR LRRGARH
Sbjct: 17 LEGPPRHRQAHRAEPAGQGLRRALRRGARH 106
Score = 24.9 bits (48), Expect(2) = 5e-075
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = -2 / +2
Query: 135 FVPNAVPAPRSPIIVC 88
FVPNA+ P P +C
Sbjct: 401 FVPNAIFVPLDPAYIC 448
>gb|CW310304.1|CW310304 104_799_11469644_148_35750_074 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11469644, DNA
sequence
Length = 608
Score = 276 bits (597), Expect = 2e-073
Identities = 121/124 (97%), Positives = 123/124 (99%)
Frame = -1 / +2
Query: 634 RVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVSVV 455
RVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVSVV
Sbjct: 236 RVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVSVV 415
Query: 454 PSAAALVIKALKEPERDRKKVKNIKHSGNISLDDVIEIAKTMRNRSMAKELAGTVKEILG 275
PSAAALVIKALKEPERDRKKVKNIKHSGNISLDDV+EIAKTMR RSMAKE+AGTVKEILG
Sbjct: 416 PSAAALVIKALKEPERDRKKVKNIKHSGNISLDDVVEIAKTMRPRSMAKEMAGTVKEILG 595
Query: 274 TCVS 263
TCVS
Sbjct: 596 TCVS 607
Score = 204 bits (439), Expect = 1e-051
Identities = 94/123 (76%), Positives = 94/123 (76%)
Frame = +3 / -3
Query: 264 LTQVPRISLTVPANSLAMDLFRMVLAISMTSSRLMLPLCXXXXXXXXXXXXXXXXXXXXX 443
LTQVPRISLTVPA SLAMDL MVLAIS TSSRLMLPLC
Sbjct: 606 LTQVPRISLTVPAISLAMDLGLMVLAISTTSSRLMLPLCLMFLTFLRSLSGSLSALMTSA 427
Query: 444 XXEGTTETLACRFCTVSLTVTRRPFQSLAVSLAMSSPIFFGERPSGPILGASDDAAPTSP 623
EGTTETLACRF TVSLTVTRRPFQSLAVSLAMSSPIF GERPSGPILGASDDAAPTSP
Sbjct: 426 AAEGTTETLACRFWTVSLTVTRRPFQSLAVSLAMSSPIFLGERPSGPILGASDDAAPTSP 247
Query: 624 PVT 632
PVT
Sbjct: 246 PVT 238
Score = 100 bits (214), Expect(2) = 6e-025
Identities = 43/58 (74%), Positives = 44/58 (75%)
Frame = -3 / +1
Query: 605 VVAGPQDRPARSLPEEXXXXXXXXXXXGLEGPPRHRQAHRAEPAGQGLRRPLRRGARH 432
VVAGPQDRPARSLP+E GLEGPPRHRQAHR EP GQGLRR LRRGARH
Sbjct: 265 VVAGPQDRPARSLPQEDRRGHRQGDGQGLEGPPRHRQAHRPEPTGQGLRRSLRRGARH 438
Score = 34.1 bits (68), Expect(2) = 6e-025
Identities = 14/19 (73%), Positives = 14/19 (73%)
Frame = -3 / +1
Query: 320 VHGQGVGRDRQGDPGDLRQ 264
VHGQG GR RQGD LRQ
Sbjct: 550 VHGQGNGRHRQGDSRHLRQ 606
>gb|CL187762.1|CL187762 104_403_10901109_114_32459_085 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10901109, DNA
sequence
Length = 582
Score = 236 bits (510), Expect = 2e-061
Identities = 103/106 (97%), Positives = 105/106 (99%)
Frame = -1 / -2
Query: 634 RVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVSVV 455
RVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVSVV
Sbjct: 320 RVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVSVV 141
Query: 454 PSAAALVIKALKEPERDRKKVKNIKHSGNISLDDVIEIAKTMRNRS 317
PSAAALVIKALKEPERDRKKVKNIKHSGNISLDD++EIAKTMR RS
Sbjct: 140 PSAAALVIKALKEPERDRKKVKNIKHSGNISLDDIVEIAKTMRPRS 3
Score = 179 bits (386), Expect = 3e-044
Identities = 80/106 (75%), Positives = 80/106 (75%)
Frame = +3 / +1
Query: 315 MDLFRMVLAISMTSSRLMLPLCXXXXXXXXXXXXXXXXXXXXXXXEGTTETLACRFCTVS 494
MDL RMVLAIS SSRLMLPLC EGTTETLACRFCTVS
Sbjct: 1 MDLGRMVLAISTMSSRLMLPLCLMFLTFFLSLSGSLSALMTSAAAEGTTETLACRFCTVS 180
Query: 495 LTVTRRPFQSLAVSLAMSSPIFFGERPSGPILGASDDAAPTSPPVT 632
LTVTRRPFQSLAVSLAMSSPIFFGERPSGPILGASDDAAPTSPPVT
Sbjct: 181 LTVTRRPFQSLAVSLAMSSPIFFGERPSGPILGASDDAAPTSPPVT 318
>gb|BE352873.1|BE352873 LG1_269_G01.g1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 477
Score = 186 bits (401), Expect(2) = 2e-060
Identities = 76/112 (67%), Positives = 96/112 (85%)
Frame = -1 / +2
Query: 520 WKGLRVTVKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKVKNIKHSGNISLDDVIEI 341
WKG++VTVKL++QNR V VVPSA+ALVIKAL EP R RKK KNIK GN+S DDV++I
Sbjct: 119 WKGMKVTVKLSIQNRAYTVEVVPSASALVIKALAEPPRARKKEKNIKPHGNLSFDDVVKI 298
Query: 340 AKTMRNRSMAKELAGTVKEILGTCVSVGCTVDGKDPKDLQQEIDDGEVEIPS 185
A+ MR RS+A++LAGTVKEILGTCVSVGC+V+G PK++QQ+I DGE+E+P+
Sbjct: 299 ARQMRARSLARDLAGTVKEILGTCVSVGCSVNGASPKEIQQKITDGELEVPA 454
Score = 67.5 bits (141), Expect(2) = 2e-060
Identities = 27/33 (81%), Positives = 30/33 (90%)
Frame = -1 / +2
Query: 634 RVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAK 536
RV GGE GA SSLAPK+GPLGLSPKK+G+DIAK
Sbjct: 8 RVVGGESGAMSSLAPKLGPLGLSPKKVGDDIAK 106
Score = 57.9 bits (120), Expect(3) = 2e-021
Identities = 27/44 (61%), Positives = 31/44 (70%)
Frame = +3 / -1
Query: 243 PSTVHPTLTQVPRISLTVPANSLAMDLFRMVLAISMTSSRLMLP 374
P T HPT TQVP+ISLTVPA SLA + R+ AI TSS+L P
Sbjct: 396 PLTEHPTETQVPKISLTVPAKSLARERARIWRAILTTSSKLRFP 265
Score = 52.8 bits (109), Expect(3) = 2e-021
Identities = 20/32 (62%), Positives = 24/32 (75%)
Frame = +3 / -1
Query: 537 LAMSSPIFFGERPSGPILGASDDAAPTSPPVT 632
LA+SSP F G++P GP LGA +D AP SPP T
Sbjct: 105 LAISSPTFLGDKPRGPSLGAREDMAPDSPPTT 10
Score = 29.9 bits (59), Expect(3) = 2e-021
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = +3 / -1
Query: 450 EGTTETLACRFCTVSLTVTRRPFQS 524
EGTT T+ F SLTVT PFQ+
Sbjct: 189 EGTTSTV*ALFWMESLTVTFMPFQA 115
>gb|BF704767.1|BF704767 FM1_51_C06.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 409
Score = 233 bits (503), Expect = 2e-060
Identities = 101/103 (98%), Positives = 103/103 (100%)
Frame = -1 / +1
Query: 634 RVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVSVV 455
RVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVSVV
Sbjct: 100 RVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVSVV 279
Query: 454 PSAAALVIKALKEPERDRKKVKNIKHSGNISLDDVIEIAKTMR 326
PSAAALVIKALKEPERDRKKVKNIKHSGNISLDD++EIAKTMR
Sbjct: 280 PSAAALVIKALKEPERDRKKVKNIKHSGNISLDDIVEIAKTMR 408
Score = 174 bits (374), Expect = 1e-042
Identities = 77/102 (75%), Positives = 77/102 (75%)
Frame = +3 / -3
Query: 327 RMVLAISMTSSRLMLPLCXXXXXXXXXXXXXXXXXXXXXXXEGTTETLACRFCTVSLTVT 506
RMVLAIS SSRLMLPLC EGTTETLACRFCTVSLTVT
Sbjct: 407 RMVLAISTMSSRLMLPLCLMFLTFFLSLSGSLSALMTSAAAEGTTETLACRFCTVSLTVT 228
Query: 507 RRPFQSLAVSLAMSSPIFFGERPSGPILGASDDAAPTSPPVT 632
RRPFQSLAVSLAMSSPIFFGERPSGPILGASDDAAPTSPPVT
Sbjct: 227 RRPFQSLAVSLAMSSPIFFGERPSGPILGASDDAAPTSPPVT 102
>gb|AW671110.1|AW671110 LG1_329_E02.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 503
Score = 179 bits (385), Expect(2) = 3e-060
Identities = 74/98 (75%), Positives = 88/98 (89%)
Frame = -1 / +1
Query: 523 DWKGLRVTVKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKVKNIKHSGNISLDDVIE 344
DWKGLRVTVKLT+QNRQA VSVVP+A++L+IKALKEP RDRKK KNIKH+ ++SLD++IE
Sbjct: 193 DWKGLRVTVKLTIQNRQAAVSVVPTASSLIIKALKEPPRDRKKEKNIKHNKSVSLDEIIE 372
Query: 343 IAKTMRNRSMAKELAGTVKEILGTCVSVGCTVDGKDPK 230
IA+TMR +S AKEL+GTVKEILGT SVGC VDGK P+
Sbjct: 373 IARTMRYKSFAKELSGTVKEILGTAYSVGCQVDGKPPQ 486
Score = 74.4 bits (156), Expect(2) = 3e-060
Identities = 30/35 (85%), Positives = 33/35 (94%)
Frame = -1 / +1
Query: 634 RVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKET 530
R TGGEVGA+S+LAPKIGPLGLSPKK+GEDIAK T
Sbjct: 85 RATGGEVGASSALAPKIGPLGLSPKKVGEDIAKAT 189
Score = 68.0 bits (142), Expect(3) = 7e-030
Identities = 33/46 (71%), Positives = 35/46 (76%)
Frame = +3 / -1
Query: 243 PSTVHPTLTQVPRISLTVPANSLAMDLFRMVLAISMTSSRLMLPLC 380
PST PTL VPRISLTVP +SLA DL+RMV AISM SSRL LC
Sbjct: 473 PSTWQPTL*AVPRISLTVPESSLAKDLYRMVRAISMISSRLTDLLC 336
Score = 59.7 bits (124), Expect(3) = 7e-030
Identities = 24/33 (72%), Positives = 27/33 (81%)
Frame = +3 / -1
Query: 531 VSLAMSSPIFFGERPSGPILGASDDAAPTSPPV 629
V+LAMSSP F G+RP GPILGA + APTSPPV
Sbjct: 188 VALAMSSPTFLGDRPRGPILGARAEEAPTSPPV 90
Score = 41.8 bits (85), Expect(3) = 7e-030
Identities = 18/24 (75%), Positives = 20/24 (83%)
Frame = +3 / -1
Query: 453 GTTETLACRFCTVSLTVTRRPFQS 524
GTT+T A RF VSLTVTR+PFQS
Sbjct: 263 GTTDTAA*RFWMVSLTVTRKPFQS 192
>gb|BG050143.1|BG050143 FM1_67_B12.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 394
Score = 231 bits (499), Expect = 7e-060
Identities = 101/102 (99%), Positives = 102/102 (100%)
Frame = -1 / +1
Query: 634 RVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVSVV 455
RVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVSVV
Sbjct: 88 RVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVSVV 267
Query: 454 PSAAALVIKALKEPERDRKKVKNIKHSGNISLDDVIEIAKTM 329
PSAAALVIKALKEPERDRKKVKNIKHSGNISLDDV+EIAKTM
Sbjct: 268 PSAAALVIKALKEPERDRKKVKNIKHSGNISLDDVVEIAKTM 393
Score = 164 bits (352), Expect = 1e-039
Identities = 73/101 (72%), Positives = 73/101 (72%)
Frame = +3 / -3
Query: 330 MVLAISMTSSRLMLPLCXXXXXXXXXXXXXXXXXXXXXXXEGTTETLACRFCTVSLTVTR 509
MVLAIS TSSRLMLPLC EGTTETLAC FCTVSLTVTR
Sbjct: 392 MVLAISTTSSRLMLPLCLMFLTFFLSLSGSLSALMTSAAAEGTTETLACLFCTVSLTVTR 213
Query: 510 RPFQSLAVSLAMSSPIFFGERPSGPILGASDDAAPTSPPVT 632
RPFQS AVSLAMSSPIFFGERPSGPILGA DAAPTSPPVT
Sbjct: 212 RPFQSFAVSLAMSSPIFFGERPSGPILGARXDAAPTSPPVT 90
>gb|BQ656052.1|BQ656052 pRC0368 Sorghum halepense rhizome cDNA library Sorghum halepense
cDNA clone pRC0368, mRNA sequence
Length = 461
Score = 226 bits (488), Expect(2) = 1e-059
Identities = 98/108 (90%), Positives = 103/108 (95%)
Frame = -1 / +3
Query: 469 KVSVVPSAAALVIKALKEPERDRKKVKNIKHSGNISLDDVIEIAKTMRNRSMAKELAGTV 290
KVSVVPSAAALVIKALKEPERDRKKVKNIKHSGNISLDD++EIAKTMR RSMAKE+AGTV
Sbjct: 3 KVSVVPSAAALVIKALKEPERDRKKVKNIKHSGNISLDDIVEIAKTMRPRSMAKEMAGTV 182
Query: 289 KEILGTCVSVGCTVDGKDPKDLQQEIDDGEVEIPSA*RLYN*KSSDTI 146
KEILGTCVSVGCTVDGKDPKDLQQEIDDGEVEIPSA*RL+N* T+
Sbjct: 183 KEILGTCVSVGCTVDGKDPKDLQQEIDDGEVEIPSA*RLFN*GDHQTL 326
Score = 105 bits (225), Expect = 5e-022
Identities = 55/102 (53%), Positives = 56/102 (54%)
Frame = +3 / -2
Query: 165 *LYSL*AEXXXXXXXXXXXXXXXXXFPSTVHPTLTQVPRISLTVPANSLAMDLFRMVLAI 344
*L SL*AE PSTVHPTLTQVPRISLTVPA SLAMDL RMVLAI
Sbjct: 307 *LNSL*AEGISTSPSSISCCRSLGSLPSTVHPTLTQVPRISLTVPAISLAMDLGRMVLAI 128
Query: 345 SMTSSRLMLPLCXXXXXXXXXXXXXXXXXXXXXXXEGTTETL 470
S SSRL+LPLC EGTTETL
Sbjct: 127 STMSSRLILPLCLMFLTFFLSLSGSLSALMTSAAAEGTTETL 2
Score = 105 bits (223), Expect(2) = 3e-025
Identities = 44/52 (84%), Positives = 45/52 (86%)
Frame = -3 / +2
Query: 320 VHGQGVGRDRQGDPGDLRQRRVHRRWEGPQGLAAGDR*W*GRDPLSLKAIQL 165
VHGQG GR RQGDP DLRQR VHR W+GPQG AAGDR*W*GRDPL LKAIQL
Sbjct: 152 VHGQGDGRHRQGDPRDLRQRWVHR*WQGPQGPAAGDR*W*GRDPLRLKAIQL 307
Score = 30.9 bits (61), Expect(2) = 3e-025
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = -3 / +2
Query: 470 QGLRRPLRRGARH 432
QGLRR LRRGARH
Sbjct: 2 QGLRRALRRGARH 40
Score = 24.9 bits (48), Expect(2) = 1e-059
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = -2 / +2
Query: 135 FVPNAVPAPRSPIIVC 88
FVPNA+ P P +C
Sbjct: 335 FVPNAIFVPLDPAYIC 382
>gb|BF656536.1|BF656536 FM1_51_C06.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 460
Score = 208 bits (448), Expect(2) = 4e-054
Identities = 89/99 (89%), Positives = 94/99 (94%)
Frame = -1 / +1
Query: 442 ALVIKALKEPERDRKKVKNIKHSGNISLDDVIEIAKTMRNRSMAKELAGTVKEILGTCVS 263
ALVIKALKEPERDRKKVKNIKHSGNISLDD++EIAKTMR RSMAKE+AGTVKEILGTCVS
Sbjct: 1 ALVIKALKEPERDRKKVKNIKHSGNISLDDIVEIAKTMRPRSMAKEMAGTVKEILGTCVS 180
Query: 262 VGCTVDGKDPKDLQQEIDDGEVEIPSA*RLYN*KSSDTI 146
VGCTVDGKDPKDLQQEIDDGEVEIPSA*RL+N* T+
Sbjct: 181 VGCTVDGKDPKDLQQEIDDGEVEIPSA*RLFN*GDHQTL 297
Score = 105 bits (223), Expect = 9e-022
Identities = 44/52 (84%), Positives = 45/52 (86%)
Frame = -3 / +3
Query: 320 VHGQGVGRDRQGDPGDLRQRRVHRRWEGPQGLAAGDR*W*GRDPLSLKAIQL 165
VHGQG GR RQGDP DLRQR VHR W+GPQG AAGDR*W*GRDPL LKAIQL
Sbjct: 123 VHGQGDGRHRQGDPRDLRQRWVHR*WQGPQGPAAGDR*W*GRDPLRLKAIQL 278
Score = 24.9 bits (48), Expect(2) = 4e-054
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = -2 / +3
Query: 135 FVPNAVPAPRSPIIVC 88
FVPNA+ P P +C
Sbjct: 306 FVPNAIFVPLDPAYIC 353
>gb|AW924861.1|AW924861 WS1_72_G07.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 490
Score = 206 bits (445), Expect = 2e-052
Identities = 89/92 (96%), Positives = 91/92 (98%)
Frame = -1 / +3
Query: 454 PSAAALVIKALKEPERDRKKVKNIKHSGNISLDDVIEIAKTMRNRSMAKELAGTVKEILG 275
PSAAALVIKALKEPERDRKKVKNIKHSGNISLDDV+EIAKTMR RSMAKE+AGTVKEILG
Sbjct: 3 PSAAALVIKALKEPERDRKKVKNIKHSGNISLDDVVEIAKTMRPRSMAKEMAGTVKEILG 182
Query: 274 TCVSVGCTVDGKDPKDLQQEIDDGEVEIPSA* 179
TCVSVGCTVDGKDPKDLQQEIDDGEVEIPSA*
Sbjct: 183 TCVSVGCTVDGKDPKDLQQEIDDGEVEIPSA* 278
>gb|CD427733.1|CD427733 ETH1_34_E12.b1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_34_E12_A002 3', mRNA sequence
Length = 591
Score = 157 bits (338), Expect(2) = 1e-051
Identities = 62/125 (49%), Positives = 94/125 (75%)
Frame = -1 / +3
Query: 547 DIAKETAKDWKGLRVTVKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKVKNIKHSGN 368
D + + WKG++V +++ VQNR A +SV+PSA+AL++K L E RDRKKVKNIKH GN
Sbjct: 105 DDIAKETEKWKGIKVMIEMRVQNRNATISVLPSASALLLKELNEKPRDRKKVKNIKHDGN 284
Query: 367 ISLDDVIEIAKTMRNRSMAKELAGTVKEILGTCVSVGCTVDGKDPKDLQQEIDDGEVEIP 188
++LD V++ AK M +RS++K L GTVK++LGTC S+GCTV+ + P + ++I+ G++++
Sbjct: 285 LTLDQVVKCAKIMESRSLSKTLKGTVKQLLGTCNSLGCTVNNEKPTSIIEKINSGQIDV* 464
Query: 187 SA*RL 173
S * L
Sbjct: 465 SC*DL 479
Score = 67.0 bits (140), Expect(2) = 1e-051
Identities = 27/37 (72%), Positives = 32/37 (86%)
Frame = -1 / +3
Query: 634 RVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAK 524
+ GGE GAASSLAPK+GPLGL+ KK+G+DIAKET K
Sbjct: 21 KTRGGEPGAASSLAPKMGPLGLNAKKVGDDIAKETEK 131
>gb|CL187296.1|CL187296 104_402_10900781_116_32436_019 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10900781, DNA
sequence
Length = 648
Score = 199 bits (428), Expect = 5e-050
Identities = 87/87 (100%), Positives = 87/87 (100%)
Frame = -1 / -2
Query: 634 RVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVSVV 455
RVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVSVV
Sbjct: 263 RVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVSVV 84
Query: 454 PSAAALVIKALKEPERDRKKVKNIKHS 374
PSAAALVIKALKEPERDRKKVKNIKHS
Sbjct: 83 PSAAALVIKALKEPERDRKKVKNIKHS 3
Score = 141 bits (303), Expect = 8e-033
Identities = 62/87 (71%), Positives = 62/87 (71%)
Frame = +3 / +1
Query: 372 PLCXXXXXXXXXXXXXXXXXXXXXXXEGTTETLACRFCTVSLTVTRRPFQSLAVSLAMSS 551
PLC EGTTETLACRF TVSLTVTRRPFQSLAVSLAMSS
Sbjct: 1 PLCLMFLTFLRSLSGSLSALMTSAAAEGTTETLACRFWTVSLTVTRRPFQSLAVSLAMSS 180
Query: 552 PIFFGERPSGPILGASDDAAPTSPPVT 632
PIF GERPSGPILGASDDAAPTSPPVT
Sbjct: 181 PIFLGERPSGPILGASDDAAPTSPPVT 261
>gb|CD431862.1|CD431862 ETH1_11_A05.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_11_A05_A002 5', mRNA sequence
Length = 609
Score = 152 bits (327), Expect(2) = 5e-050
Identities = 59/110 (53%), Positives = 86/110 (78%)
Frame = -1 / +1
Query: 520 WKGLRVTVKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKVKNIKHSGNISLDDVIEI 341
WKG++V +++ VQNR A +SV+PSA+AL+IK L E RDRKKVKNIKH GN++ V++
Sbjct: 208 WKGIKVMIEMRVQNRNAVISVLPSASALLIKELNEKPRDRKKVKNIKHDGNLTFAQVVKC 387
Query: 340 AKTMRNRSMAKELAGTVKEILGTCVSVGCTVDGKDPKDLQQEIDDGEVEI 191
AK M +S++K L GTVK++LGTC S+GCTVDG+ P+ + +I+ GE+++
Sbjct: 388 AKVMEPKSLSKTLKGTVKQLLGTCHSLGCTVDGQAPRAIIXKINSGELDV 537
Score = 66.6 bits (139), Expect(2) = 5e-050
Identities = 27/37 (72%), Positives = 32/37 (86%)
Frame = -1 / +1
Query: 634 RVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAK 524
+ GGE GAASSLAPK+GPLGL+ KK+G+DIAKET K
Sbjct: 97 KTRGGEPGAASSLAPKMGPLGLNAKKVGDDIAKETDK 207
>gb|BE356499.1|BE356499 DG1_125_G10.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 330
Score = 197 bits (425), Expect = 1e-049
Identities = 85/89 (95%), Positives = 87/89 (97%)
Frame = -1 / +2
Query: 439 LVIKALKEPERDRKKVKNIKHSGNISLDDVIEIAKTMRNRSMAKELAGTVKEILGTCVSV 260
LVIKALKEPERD KKVKNIKHSGNISLDDV+EIAKTMR RSMAKE+AGTVKEILGTCVSV
Sbjct: 2 LVIKALKEPERDSKKVKNIKHSGNISLDDVVEIAKTMRPRSMAKEMAGTVKEILGTCVSV 181
Query: 259 GCTVDGKDPKDLQQEIDDGEVEIPSA*RL 173
GCTVDGKDPKDLQQEIDDGEVEIPSA*RL
Sbjct: 182 GCTVDGKDPKDLQQEIDDGEVEIPSA*RL 268
Score = 92.7 bits (196), Expect(2) = 1e-024
Identities = 42/46 (91%), Positives = 42/46 (91%)
Frame = +3 / -1
Query: 243 PSTVHPTLTQVPRISLTVPANSLAMDLFRMVLAISMTSSRLMLPLC 380
PSTVHPTLTQVPRISLTVPA SLAMDL MVLAIS TSSRLMLPLC
Sbjct: 198 PSTVHPTLTQVPRISLTVPAISLAMDLGLMVLAISTTSSRLMLPLC 61
Score = 40.9 bits (83), Expect(2) = 1e-024
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = +1 / -2
Query: 169 CIAFKLRGSRPHHHRSPAASPW 234
C+ FK GSRP H+SP A PW
Sbjct: 272 CLVFKRMGSRPRRHQSPVAGPW 207
>gb|AW565819.1|AW565819 LG1_352_B02.g1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 540
Score = 176 bits (379), Expect = 3e-043
Identities = 75/107 (70%), Positives = 89/107 (83%)
Frame = -1 / +3
Query: 508 RVTVKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKVKNIKHSGNISLDDVIEIAKTM 329
RVTVKLT+QNRQA VSVVPSA++LVIKALKEP RDRKK KNIKH+ +I LD++I IA+TM
Sbjct: 3 RVTVKLTIQNRQAAVSVVPSASSLVIKALKEPPRDRKKEKNIKHTKSIPLDEIINIARTM 182
Query: 328 RNRSMAKELAGTVKEILGTCVSVGCTVDGKDPKDLQQEIDDGEVEIP 188
R +SMAK+L GTV EILGT S GC VDG+ PKD+ +I GE+EIP
Sbjct: 183 RFKSMAKDLKGTVLEILGTAFSTGCKVDGRSPKDISDDIKAGEIEIP 323
>gb|CF772218.1|CF772218 DSBF1_30_H03.g1_A010 Drought-stressed before flowering Sorghum
bicolor cDNA clone DSBF1_30_H03_A010 3', mRNA sequence
Length = 421
Score = 155 bits (333), Expect = 6e-037
Identities = 66/72 (91%), Positives = 68/72 (94%)
Frame = -1 / +1
Query: 394 VKNIKHSGNISLDDVIEIAKTMRNRSMAKELAGTVKEILGTCVSVGCTVDGKDPKDLQQE 215
VKNIKHSGNISLDDV+EIAKTMR RSMAKE+AG VKEI GTCVSVGC VDGKDPKDLQQE
Sbjct: 1 VKNIKHSGNISLDDVVEIAKTMRPRSMAKEMAGPVKEIFGTCVSVGCPVDGKDPKDLQQE 180
Query: 214 IDDGEVEIPSA* 179
IDDGEVEIPSA*
Sbjct: 181 IDDGEVEIPSA* 216
>gb|CW311467.1|CW311467 104_801_11470249_116_36281_015 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11470249, DNA
sequence
Length = 702
Score = 152 bits (327), Expect = 4e-036
Identities = 67/69 (97%), Positives = 68/69 (98%)
Frame = -1 / +3
Query: 634 RVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVSVV 455
RVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKV VV
Sbjct: 492 RVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVYVV 671
Query: 454 PSAAALVIK 428
PSAAALVI+
Sbjct: 672 PSAAALVIR 698
Score = 141 bits (303), Expect = 8e-033
Identities = 60/61 (98%), Positives = 60/61 (98%)
Frame = +3 / -3
Query: 450 EGTTETLACRFCTVSLTVTRRPFQSLAVSLAMSSPIFFGERPSGPILGASDDAAPTSPPV 629
EGTT TLACRFCTVSLTVTRRPFQSLAVSLAMSSPIFFGERPSGPILGASDDAAPTSPPV
Sbjct: 676 EGTT*TLACRFCTVSLTVTRRPFQSLAVSLAMSSPIFFGERPSGPILGASDDAAPTSPPV 497
Query: 630 T 632
T
Sbjct: 496 T 494
>gb|CW375799.1|CW375799 fsbb001f053f11f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f053f11, DNA
sequence
Length = 459
Score = 150 bits (323), Expect = 1e-035
Identities = 66/66 (100%), Positives = 66/66 (100%)
Frame = -1 / -1
Query: 634 RVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVSVV 455
RVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVSVV
Sbjct: 198 RVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVSVV 19
Query: 454 PSAAAL 437
PSAAAL
Sbjct: 18 PSAAAL 1
Score = 140 bits (300), Expect = 2e-032
Identities = 59/61 (96%), Positives = 59/61 (96%)
Frame = +3 / +2
Query: 450 EGTTETLACRFCTVSLTVTRRPFQSLAVSLAMSSPIFFGERPSGPILGASDDAAPTSPPV 629
EGTTETLAC FCTVSLTVTRRPFQSLAVSLAMSSPIFFGERPSGPILGA DDAAPTSPPV
Sbjct: 14 EGTTETLACLFCTVSLTVTRRPFQSLAVSLAMSSPIFFGERPSGPILGARDDAAPTSPPV 193
Query: 630 T 632
T
Sbjct: 194 T 196
>gb|CL165793.1|CL165793 104_361_10808905_114_31820_121 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10808905, DNA
sequence
Length = 720
Score = 149 bits (319), Expect = 5e-035
Identities = 65/65 (100%), Positives = 65/65 (100%)
Frame = -1 / -1
Query: 634 RVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVSVV 455
RVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVSVV
Sbjct: 195 RVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVSVV 16
Query: 454 PSAAA 440
PSAAA
Sbjct: 15 PSAAA 1
Score = 138 bits (295), Expect = 1e-031
Identities = 59/61 (96%), Positives = 59/61 (96%)
Frame = +3 / +2
Query: 450 EGTTETLACRFCTVSLTVTRRPFQSLAVSLAMSSPIFFGERPSGPILGASDDAAPTSPPV 629
EGTTETLACRF TVSLTVTRRPFQSLAVSLAMSSPIF GERPSGPILGASDDAAPTSPPV
Sbjct: 11 EGTTETLACRFWTVSLTVTRRPFQSLAVSLAMSSPIFLGERPSGPILGASDDAAPTSPPV 190
Query: 630 T 632
T
Sbjct: 191 T 193
>gb|AI724349.1|AI724349 RHIZ1_33_B10.y2_A001 Rhizome1 (RHIZ1) Sorghum halepense cDNA, mRNA
sequence
Length = 335
Score = 104 bits (222), Expect(2) = 2e-023
Identities = 44/50 (88%), Positives = 46/50 (92%)
Frame = -1 / +3
Query: 295 TVKEILGTCVSVGCTVDGKDPKDLQQEIDDGEVEIPSA*RLYN*KSSDTI 146
TVKEILGTCVSVGCTVDGKDPKDLQQEIDDGEVEIPSA*RL+N* T+
Sbjct: 3 TVKEILGTCVSVGCTVDGKDPKDLQQEIDDGEVEIPSA*RLFN*GDHQTL 152
Score = 24.9 bits (48), Expect(2) = 2e-023
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = -2 / +2
Query: 135 FVPNAVPAPRSPIIVC 88
FVPNA+ P P +C
Sbjct: 161 FVPNAIFVPLDPAYIC 208
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 484,066,095
Number of Sequences: 832831
Number of extensions: 5791935
Number of successful extensions: 85622
Number of sequences better than 1.0e-020: 53
length of database: 163,786,556
effective HSP length: 53
effective length of database: 119,646,513
effective search space used: 18784502541
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)