TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 1804898.2.1
(739 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CN151211.1|CN151211 WOUND1_74_C10.b1_A002 Wounded leaves... 68 4e-029
gb|CN135321.1|CN135321 OX1_32_B07.b1_A002 Oxidatively-stres... 71 4e-029
gb|CF433158.1|CF433158 NIT1_25_E08.b1_A002 Nitrogen-deficie... 67 1e-028
gb|CW063049.1|CW063049 104_308_10521687_1_30092 Sorghum met... 80 1e-028
gb|CF490081.1|CF490081 POL1_62_H01.b1_A002 Pollen Sorghum b... 80 1e-028
gb|CN151544.1|CN151544 WOUND1_76_C11.b1_A002 Wounded leaves... 70 1e-028
gb|CD235375.1|CD235375 SS1_29_H10.b1_A012 Salt-stressed see... 67 2e-028
gb|CN129718.1|CN129718 RHOH1_37_B03.b1_A002 Acid- and alkal... 64 4e-027
gb|CD232077.1|CD232077 SS1_38_E04.b1_A012 Salt-stressed see... 65 4e-027
gb|CN146677.1|CN146677 WOUND1_43_B07.b1_A002 Wounded leaves... 65 1e-026
gb|CX622109.1|CX622109 GABR1_62_C09.b2_A002 GA- or brassino... 65 1e-026
gb|AW923055.1|AW923055 DG1_48_G01.g1_A002 Dark Grown 1 (DG1... 65 1e-026
gb|CN149045.1|CN149045 WOUND1_60_H10.b1_A002 Wounded leaves... 65 1e-026
gb|CX618728.1|CX618728 GABR1_41_G07.b1_A002 GA- or brassino... 65 1e-026
gb|CX607042.1|CX607042 ANR1_6_H06.b1_A002 Anaerobic roots S... 67 7e-026
gb|CX620993.1|CX620993 GABR1_55_G09.b1_A002 GA- or brassino... 62 7e-026
gb|CN144107.1|CN144107 WOUND1_20_E12.b1_A002 Wounded leaves... 71 1e-025
gb|CN150018.1|CN150018 WOUND1_66_H09.b1_A002 Wounded leaves... 63 2e-025
gb|CX606124.1|CX606124 ANR1_1_F10.b1_A002 Anaerobic roots S... 70 4e-025
gb|BG102714.1|BG102714 RHIZ2_36_D11.g1_A003 Rhizome2 (RHIZ2... 72 6e-025
gb|BG558734.1|BG558734 RHIZ2_59_G10.g1_A003 Rhizome2 (RHIZ2... 73 6e-025
gb|CN148282.1|CN148282 WOUND1_55_G06.b1_A002 Wounded leaves... 70 8e-025
gb|BE596903.1|BE596903 PI1_60_A01.g1_A002 Pathogen induced ... 68 1e-024
gb|CN150569.1|CN150569 WOUND1_70_C05.b1_A002 Wounded leaves... 68 3e-024
gb|BG052711.1|BG052711 RHIZ2_28_G08.g1_A003 Rhizome2 (RHIZ2... 69 5e-024
gb|CN129547.1|CN129547 RHOH1_36_B08.b3_A002 Acid- and alkal... 62 1e-023
gb|CF431162.1|CF431162 NIT1_6_C08.b1_A002 Nitrogen-deficien... 67 1e-023
gb|CF431021.1|CF431021 NIT1_4_H02.b1_A002 Nitrogen-deficien... 71 2e-023
gb|BM328717.1|BM328717 PIC1_25_G03.g1_A002 Pathogen-infecte... 82 2e-023
gb|CN150014.1|CN150014 WOUND1_66_H05.b1_A002 Wounded leaves... 65 6e-023
gb|CD234204.1|CD234204 SS1_26_B02.b1_A012 Salt-stressed see... 65 6e-023
gb|CN141678.1|CN141678 WOUND1_1_E01.b1_A002 Wounded leaves ... 65 6e-023
gb|BE360969.1|BE360969 DG1_68_C08.g1_A002 Dark Grown 1 (DG1... 82 8e-023
gb|CW255681.1|CW255681 104_720_11226371_148_35403_042 Sorgh... 65 1e-022
gb|CL152122.1|CL152122 104_335_10779735_116_31364_135 Sorgh... 65 1e-022
gb|CN150866.1|CN150866 WOUND1_72_A06.b1_A002 Wounded leaves... 66 1e-022
gb|CN145288.1|CN145288 WOUND1_28_A10.b2_A002 Wounded leaves... 64 4e-022
gb|CX608050.1|CX608050 ANR1_32_G10.b1_A002 Anaerobic roots ... 63 1e-021
gb|CF429902.1|CF429902 PH1_25_D10.b1_A002 Phosphorous-defic... 63 1e-021
gb|CN138524.1|CN138524 OX1_64_G03.b1_A002 Oxidatively-stres... 55 5e-021
gb|BG463547.1|BG463547 EM1_49_H04.g1_A002 Embryo 1 (EM1) So... 64 5e-021
gb|CF771144.1|CF771144 DSBF1_14_E10.g1_A010 Drought-stresse... 62 7e-021
>gb|CN151211.1|CN151211 WOUND1_74_C10.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_74_C10_A002 3', mRNA sequence
Length = 780
Score = 68.4 bits (143), Expect(3) = 4e-023
Identities = 33/56 (58%), Positives = 38/56 (67%)
Frame = -2 / -3
Query: 297 DPSTVSIIITFPPASLPPIASLQRSIILMHLSSSQSCRIHLSMSASADGMCSNMSP 130
+P+T+SIII FPPAS IA LQ IL H SS QSCRIHL +A A G+ MSP
Sbjct: 346 NPTTISIIIIFPPASRGGIACLQFFSILTHSSSCQSCRIHLRNTAFAGGIL*KMSP 179
Score = 65.7 bits (137), Expect(3) = 4e-029
Identities = 28/52 (53%), Positives = 37/52 (71%)
Frame = +2 / +3
Query: 335 ETYVLDLHILSFVNGAEREEHEWRRIFLAAGFRDYKITHTRGIPSIIEVFP* 490
ET VL ++ VNG ER+E+EW+ IF AGF+DYKI G+ SIIE++P*
Sbjct: 372 ETQVLFDLMMMNVNGVERDENEWKNIFFEAGFKDYKIIPLLGVRSIIELYP* 527
Score = 64.3 bits (134), Expect(3) = 4e-029
Identities = 20/34 (58%), Positives = 29/34 (85%)
Frame = +2 / +3
Query: 131 GDMFEHIPSADALMLKWILHDWDEDKCIKIMERC 232
GD+F+ IP A+A+ LKWILHDW +D+C+KI++ C
Sbjct: 180 GDIFQSIPPANAVFLKWILHDWHDDECVKILKNC 281
Score = 50.6 bits (104), Expect(3) = 4e-023
Identities = 24/52 (46%), Positives = 35/52 (67%)
Frame = -2 / -3
Query: 486 GKTSMMDGMPRVCVIL*SRNPAARKILLHSCSSRSAPFTKLSMWRSNTYVSL 331
G +S+++ PR +IL*S NPA++K+ HS SSRS P T + M + T VS+
Sbjct: 523 G*SSIIERTPRSGMIL*SLNPASKKMFFHSFSSRSTPLTFIIMRSNKTCVSM 368
Score = 37.3 bits (75), Expect(3) = 4e-029
Identities = 13/18 (72%), Positives = 16/18 (88%)
Frame = +2 / +3
Query: 56 RCTVMDLPHVVAEAPAGT 109
+CTV+DLPHVVA+AP T
Sbjct: 108 KCTVLDLPHVVAKAPTDT 161
Score = 27.6 bits (54), Expect(3) = 4e-023
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = -2 / -3
Query: 108 VPAGASATTWGRSMTVH 58
V GA ATT GRS TVH
Sbjct: 160 VSVGALATTCGRSSTVH 110
>gb|CN135321.1|CN135321 OX1_32_B07.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_32_B07_A002 3', mRNA sequence
Length = 714
Score = 70.7 bits (148), Expect(3) = 1e-023
Identities = 34/56 (60%), Positives = 38/56 (67%)
Frame = -2 / -1
Query: 297 DPSTVSIIITFPPASLPPIASLQRSIILMHLSSSQSCRIHLSMSASADGMCSNMSP 130
DP+T+SIII FPPAS IA LQ IL H SS QSCRIHL +A A G+ MSP
Sbjct: 270 DPTTISIIIIFPPASRGGIACLQFFSILTHSSSCQSCRIHLRNTAFAGGIL*KMSP 103
Score = 65.7 bits (137), Expect(3) = 4e-029
Identities = 28/52 (53%), Positives = 37/52 (71%)
Frame = +2 / +2
Query: 335 ETYVLDLHILSFVNGAEREEHEWRRIFLAAGFRDYKITHTRGIPSIIEVFP* 490
ET VL ++ VNG ER+E+EW+ IF AGF+DYKI G+ SIIE++P*
Sbjct: 296 ETQVLFDLMMMNVNGVERDENEWKNIFFEAGFKDYKIIPLLGVRSIIELYP* 451
Score = 64.3 bits (134), Expect(3) = 4e-029
Identities = 20/34 (58%), Positives = 29/34 (85%)
Frame = +2 / +2
Query: 131 GDMFEHIPSADALMLKWILHDWDEDKCIKIMERC 232
GD+F+ IP A+A+ LKWILHDW +D+C+KI++ C
Sbjct: 104 GDIFQSIPPANAVFLKWILHDWHDDECVKILKNC 205
Score = 50.6 bits (104), Expect(3) = 1e-023
Identities = 24/52 (46%), Positives = 35/52 (67%)
Frame = -2 / -1
Query: 486 GKTSMMDGMPRVCVIL*SRNPAARKILLHSCSSRSAPFTKLSMWRSNTYVSL 331
G +S+++ PR +IL*S NPA++K+ HS SSRS P T + M + T VS+
Sbjct: 447 G*SSIIERTPRSGMIL*SLNPASKKMFFHSFSSRSTPLTFIIMRSNKTCVSM 292
Score = 37.3 bits (75), Expect(3) = 4e-029
Identities = 13/18 (72%), Positives = 16/18 (88%)
Frame = +2 / +2
Query: 56 RCTVMDLPHVVAEAPAGT 109
+CTV+DLPHVVA+AP T
Sbjct: 32 KCTVLDLPHVVAKAPTDT 85
Score = 27.6 bits (54), Expect(3) = 1e-023
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = -2 / -1
Query: 108 VPAGASATTWGRSMTVH 58
V GA ATT GRS TVH
Sbjct: 84 VSVGALATTCGRSSTVH 34
>gb|CF433158.1|CF433158 NIT1_25_E08.b1_A002 Nitrogen-deficient seedlings Sorghum bicolor
cDNA clone NIT1_25_E08_A002 3', mRNA sequence
Length = 626
Score = 66.6 bits (139), Expect(3) = 1e-028
Identities = 22/39 (56%), Positives = 31/39 (79%)
Frame = +2 / +2
Query: 116 LSFHGGDMFEHIPSADALMLKWILHDWDEDKCIKIMERC 232
+ + GDMFE IPSA+A+ LKWILHDW + +C+KI++ C
Sbjct: 98 VKYIAGDMFESIPSANAVFLKWILHDWGDAECVKILKNC 214
Score = 65.2 bits (136), Expect(3) = 1e-028
Identities = 27/52 (51%), Positives = 36/52 (69%)
Frame = +2 / +2
Query: 335 ETYVLDLHILSFVNGAEREEHEWRRIFLAAGFRDYKITHTRGIPSIIEVFP* 490
ET +L ++F+NGAER+E EW++I AGF YKI G+ SIIEV+P*
Sbjct: 299 ETQILFDLFMTFINGAERDELEWKKIIFEAGFSSYKIIPVLGVRSIIEVYP* 454
Score = 34.1 bits (68), Expect(3) = 1e-028
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = +2 / +2
Query: 59 CTVMDLPHVVAEAPAGT 109
C+V+DLPHVVA AP T
Sbjct: 44 CSVLDLPHVVANAPTDT 94
>gb|CW063049.1|CW063049 104_308_10521687_1_30092 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10521687, DNA
sequence
Length = 635
Score = 79.9 bits (168), Expect(3) = 1e-028
Identities = 36/57 (63%), Positives = 42/57 (73%)
Frame = -2 / -1
Query: 297 DPSTVSIIITFPPASLPPIASLQRSIILMHLSSSQSCRIHLSMSASADGMCSNMSPP 127
DP+T+S+IITFPPA+ IA L I H SS QSCRIHLS +ASA G+ SNMSPP
Sbjct: 317 DPTTMSMIITFPPAARGGIACLHFFSIFTHSSSLQSCRIHLSNTASAGGILSNMSPP 147
Score = 78.5 bits (165), Expect(2) = 2e-026
Identities = 30/72 (41%), Positives = 41/72 (56%)
Frame = +2 / +1
Query: 83 VVAEAPAGTAGLSFHGGDMFEHIPSADALMLKWILHDWDEDKCIKIMERCXXXXXXXXXX 262
V A + + GGDMFE IP ADA++LKWILHDW +D+C+KI+++C
Sbjct: 103 VAKAAAGSNEKVQYVGGDMFESIPPADAVLLKWILHDWSDDECVKILKKCKQAIPPRAAG 282
Query: 263 XXXXXXDTVLGS 298
D V+GS
Sbjct: 283 GKVIIIDMVVGS 318
Score = 62.0 bits (129), Expect(2) = 2e-026
Identities = 25/51 (49%), Positives = 35/51 (68%)
Frame = +2 / +1
Query: 335 ETYVLDLHILSFVNGAEREEHEWRRIFLAAGFRDYKITHTRGIPSIIEVFP 487
ET VL ++ +NG ER+E EW++IF AGF DY+I G+ SIIE++P
Sbjct: 358 ETQVLFDLLIMCINGVERDELEWKKIFSEAGFHDYRIIPVLGVRSIIELYP 510
Score = 54.7 bits (113), Expect(3) = 1e-028
Identities = 27/51 (52%), Positives = 32/51 (62%)
Frame = -2 / -1
Query: 486 GKTSMMDGMPRVCVIL*SRNPAARKILLHSCSSRSAPFTKLSMWRSNTYVS 334
G +SMMD PR +IL*S NPA+ KI HS SSRS P + +NT VS
Sbjct: 509 G*SSMMDRTPRTGIIL*S*NPASEKIFFHSSSSRSTPLMHMINRSNNTCVS 357
Score = 30.9 bits (61), Expect(3) = 1e-028
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = -2 / -1
Query: 108 VPAGASATTWGRSMTVHL 55
+PA A ATT GRS TVHL
Sbjct: 125 LPAAALATTCGRSSTVHL 72
>gb|CF490081.1|CF490081 POL1_62_H01.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_62_H01_A002 3', mRNA sequence
Length = 623
Score = 79.9 bits (168), Expect(3) = 1e-028
Identities = 36/57 (63%), Positives = 42/57 (73%)
Frame = -2 / -3
Query: 297 DPSTVSIIITFPPASLPPIASLQRSIILMHLSSSQSCRIHLSMSASADGMCSNMSPP 127
DP+T+S+IITFPPA+ IA L I H SS QSCRIHLS +ASA G+ SNMSPP
Sbjct: 246 DPTTMSMIITFPPAARGGIACLHFFSIFTHSSSLQSCRIHLSNTASAGGILSNMSPP 76
Score = 78.5 bits (165), Expect(2) = 2e-026
Identities = 30/72 (41%), Positives = 41/72 (56%)
Frame = +2 / +2
Query: 83 VVAEAPAGTAGLSFHGGDMFEHIPSADALMLKWILHDWDEDKCIKIMERCXXXXXXXXXX 262
V A + + GGDMFE IP ADA++LKWILHDW +D+C+KI+++C
Sbjct: 32 VAKAAAGSNEKVQYVGGDMFESIPPADAVLLKWILHDWSDDECVKILKKCKQAIPPRAAG 211
Query: 263 XXXXXXDTVLGS 298
D V+GS
Sbjct: 212 GKVIIIDMVVGS 247
Score = 62.0 bits (129), Expect(2) = 2e-026
Identities = 25/51 (49%), Positives = 35/51 (68%)
Frame = +2 / +2
Query: 335 ETYVLDLHILSFVNGAEREEHEWRRIFLAAGFRDYKITHTRGIPSIIEVFP 487
ET VL ++ +NG ER+E EW++IF AGF DY+I G+ SIIE++P
Sbjct: 287 ETQVLFDLLIMCINGVERDELEWKKIFSEAGFHDYRIIPVLGVRSIIELYP 439
Score = 54.7 bits (113), Expect(3) = 1e-028
Identities = 27/51 (52%), Positives = 32/51 (62%)
Frame = -2 / -3
Query: 486 GKTSMMDGMPRVCVIL*SRNPAARKILLHSCSSRSAPFTKLSMWRSNTYVS 334
G +SMMD PR +IL*S NPA+ KI HS SSRS P + +NT VS
Sbjct: 438 G*SSMMDRTPRTGIIL*S*NPASEKIFFHSSSSRSTPLMHMINRSNNTCVS 286
Score = 30.9 bits (61), Expect(3) = 1e-028
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = -2 / -3
Query: 108 VPAGASATTWGRSMTVHL 55
+PA A ATT GRS TVHL
Sbjct: 54 LPAAALATTCGRSSTVHL 1
>gb|CN151544.1|CN151544 WOUND1_76_C11.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_76_C11_A002 3', mRNA sequence
Length = 620
Score = 69.8 bits (146), Expect(2) = 3e-024
Identities = 33/55 (60%), Positives = 38/55 (69%)
Frame = -2 / -1
Query: 294 PSTVSIIITFPPASLPPIASLQRSIILMHLSSSQSCRIHLSMSASADGMCSNMSP 130
P T+S IITFPPASL IA LQ IL+ +S QSC+ HL +A A GM SNMSP
Sbjct: 287 PITISRIITFPPASLEGIAFLQFFSILIQSASPQSCKTHLRKTAFAGGMLSNMSP 123
Score = 68.4 bits (143), Expect(3) = 1e-028
Identities = 29/53 (54%), Positives = 36/53 (67%)
Frame = +2 / +1
Query: 332 RETYVLDLHILSFVNGAEREEHEWRRIFLAAGFRDYKITHTRGIPSIIEVFP* 490
+ET VL + FVNG ER+E EW++I AGF DYKI G+ SIIEV+P*
Sbjct: 313 KETQVLFDLFIMFVNGVERDEQEWKKIIFEAGFSDYKIIPVLGVRSIIEVYP* 471
Score = 66.1 bits (138), Expect(3) = 1e-028
Identities = 25/71 (35%), Positives = 37/71 (52%)
Frame = +2 / +1
Query: 116 LSFHGGDMFEHIPSADALMLKWILHDWDEDKCIKIMERCXXXXXXXXXXXXXXXXDTVLG 295
+ + GDMFE IP A+A+ LKW+LHDW + CIKI++ C D V+G
Sbjct: 109 VKYVAGDMFESIPPANAVFLKWVLHDWGDADCIKILKNCKNAIPSRDAGGKVIILDMVMG 288
Query: 296 SRAXXXXXXKT 328
++ +T
Sbjct: 289 GQSSNIKHKET 321
Score = 63.4 bits (132), Expect(2) = 3e-024
Identities = 29/55 (52%), Positives = 37/55 (67%)
Frame = -2 / -1
Query: 495 HHHGKTSMMDGMPRVCVIL*SRNPAARKILLHSCSSRSAPFTKLSMWRSNTYVSL 331
+++G TSMMD PR +IL*S NPA++ I HSCSSRS P T + + T VSL
Sbjct: 476 NNYG*TSMMDRTPRTGMIL*SLNPASKMIFFHSCSSRSTPLTNMMKRSNKT*VSL 312
Score = 30.9 bits (61), Expect(3) = 1e-028
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = +2 / +1
Query: 56 RCTVMDLPHVVAEAPAGT 109
+C+V++LPHV A AP T
Sbjct: 52 QCSVLELPHVAANAPIST 105
>gb|CD235375.1|CD235375 SS1_29_H10.b1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_29_H10_A012 3', mRNA sequence
Length = 652
Score = 66.6 bits (139), Expect(3) = 2e-028
Identities = 22/39 (56%), Positives = 31/39 (79%)
Frame = +2 / +2
Query: 116 LSFHGGDMFEHIPSADALMLKWILHDWDEDKCIKIMERC 232
+ + GDMFE IPSA+A+ LKWILHDW + +C+KI++ C
Sbjct: 185 VKYIAGDMFESIPSANAVFLKWILHDWGDAECVKILKNC 301
Score = 64.3 bits (134), Expect(3) = 2e-028
Identities = 27/52 (51%), Positives = 35/52 (67%)
Frame = +2 / +2
Query: 335 ETYVLDLHILSFVNGAEREEHEWRRIFLAAGFRDYKITHTRGIPSIIEVFP* 490
ET +L + F+NGAER+E EW++I AGF YKI G+ SIIEV+P*
Sbjct: 386 ETQILFDLFMMFINGAERDELEWKKIIFEAGFSSYKIIPVLGVRSIIEVYP* 541
Score = 34.1 bits (68), Expect(3) = 2e-028
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = +2 / +2
Query: 59 CTVMDLPHVVAEAPAGT 109
C+V+DLPHVVA AP T
Sbjct: 131 CSVLDLPHVVANAPTDT 181
>gb|CN129718.1|CN129718 RHOH1_37_B03.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_37_B03_A002 3', mRNA sequence
Length = 774
Score = 64.3 bits (134), Expect(3) = 4e-027
Identities = 23/63 (36%), Positives = 37/63 (58%)
Frame = +2 / +3
Query: 116 LSFHGGDMFEHIPSADALMLKWILHDWDEDKCIKIMERCXXXXXXXXXXXXXXXXDTVLG 295
+ + GDMF+ IP A+A+ LK +LHDW++D+C+KI++ C D V+G
Sbjct: 150 VQYIAGDMFQSIPPANAVFLKLVLHDWNDDECVKILKNCKKAIPSRDAGGKIIIIDMVVG 329
Query: 296 SRA 304
S +
Sbjct: 330 SES 338
Score = 62.5 bits (130), Expect(3) = 4e-027
Identities = 25/52 (48%), Positives = 36/52 (69%)
Frame = +2 / +3
Query: 335 ETYVLDLHILSFVNGAEREEHEWRRIFLAAGFRDYKITHTRGIPSIIEVFP* 490
ET +L ++ +NG ER+E EW++I AGF+DYKI G+ SIIE++P*
Sbjct: 366 ETQILKGLMMMNINGVERDEQEWKKISFEAGFKDYKIIPLLGVRSIIELYP* 521
Score = 33.6 bits (67), Expect(3) = 4e-027
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = +2 / +3
Query: 56 RCTVMDLPHVVAEAPAGT 109
+CTV+DLP VVA+AP T
Sbjct: 93 KCTVLDLPQVVAKAPTDT 146
>gb|CD232077.1|CD232077 SS1_38_E04.b1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_38_E04_A012 3', mRNA sequence
Length = 631
Score = 64.8 bits (135), Expect(3) = 2e-024
Identities = 32/55 (58%), Positives = 35/55 (63%)
Frame = -2 / -1
Query: 294 PSTVSIIITFPPASLPPIASLQRSIILMHLSSSQSCRIHLSMSASADGMCSNMSP 130
P T+SIIITFPP+S IA LQ IL H S QSC+ HL A A G SNMSP
Sbjct: 247 PITISIIITFPPSSFGGIAFLQFFNILTHSS*LQSCKTHLKNIAFAGGTLSNMSP 83
Score = 63.4 bits (132), Expect(3) = 4e-027
Identities = 18/39 (46%), Positives = 29/39 (74%)
Frame = +2 / +3
Query: 116 LSFHGGDMFEHIPSADALMLKWILHDWDEDKCIKIMERC 232
+ + GDMFE +P A+A+ KW+LHDW ++C+KI++ C
Sbjct: 69 VQYIAGDMFESVPPANAMFFKWVLHDWSHEECVKILKNC 185
Score = 61.6 bits (128), Expect(3) = 4e-027
Identities = 27/53 (50%), Positives = 33/53 (62%)
Frame = +2 / +3
Query: 332 RETYVLDLHILSFVNGAEREEHEWRRIFLAAGFRDYKITHTRGIPSIIEVFP* 490
+ET L + VNG ER+E EW++IF AGF DYKI G SII V+P*
Sbjct: 273 KETQALFDLYIMLVNGIERDEQEWKKIFFEAGFSDYKILPVLGARSIISVYP* 431
Score = 54.7 bits (113), Expect(3) = 2e-024
Identities = 26/53 (49%), Positives = 32/53 (60%)
Frame = -2 / -1
Query: 489 HGKTSMMDGMPRVCVIL*SRNPAARKILLHSCSSRSAPFTKLSMWRSNTYVSL 331
+G T M+D P IL*S NPA++KI HSCSS S PFT + + VSL
Sbjct: 430 YG*TEMIDRAPNTGNIL*SLNPASKKIFFHSCSSLSMPFTSMIYKSNKACVSL 272
Score = 35.4 bits (71), Expect(3) = 4e-027
Identities = 12/18 (66%), Positives = 17/18 (94%)
Frame = +2 / +3
Query: 56 RCTVMDLPHVVAEAPAGT 109
+C+V+DL HVVA+AP+GT
Sbjct: 12 KCSVLDLDHVVAKAPSGT 65
Score = 31.8 bits (63), Expect(3) = 2e-024
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = -2 / -1
Query: 111 AVPAGASATTWGRSMTVH 58
+VP GA ATTW +S T+H
Sbjct: 67 SVPLGALATTWSKSKTLH 14
>gb|CN146677.1|CN146677 WOUND1_43_B07.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_43_B07_A002 3', mRNA sequence
Length = 754
Score = 64.8 bits (135), Expect(3) = 1e-026
Identities = 28/52 (53%), Positives = 35/52 (67%)
Frame = +2 / +2
Query: 335 ETYVLDLHILSFVNGAEREEHEWRRIFLAAGFRDYKITHTRGIPSIIEVFP* 490
ET VL + +NGAER+E EW++I AGFR YKI G+ SIIEV+P*
Sbjct: 386 ETQVLFDLFIMTINGAERDEKEWKKIIFEAGFRSYKIMPVLGVRSIIEVYP* 541
Score = 63.8 bits (133), Expect(3) = 1e-026
Identities = 19/39 (48%), Positives = 30/39 (76%)
Frame = +2 / +2
Query: 116 LSFHGGDMFEHIPSADALMLKWILHDWDEDKCIKIMERC 232
+ + GDMFE +PSA+ + LKW+LHDW + +C+KI++ C
Sbjct: 185 VKYIAGDMFESVPSANVVFLKWVLHDWGDAECVKILKNC 301
Score = 29.9 bits (59), Expect(3) = 1e-026
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +2 / +2
Query: 59 CTVMDLPHVVAEAPAGT 109
C+V+DLP+VVA AP T
Sbjct: 131 CSVLDLPNVVAVAPTDT 181
>gb|CX622109.1|CX622109 GABR1_62_C09.b2_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_62_C09_A002 3', mRNA sequence
Length = 740
Score = 64.8 bits (135), Expect(3) = 1e-026
Identities = 28/52 (53%), Positives = 35/52 (67%)
Frame = +2 / +3
Query: 335 ETYVLDLHILSFVNGAEREEHEWRRIFLAAGFRDYKITHTRGIPSIIEVFP* 490
ET VL + +NGAER+E EW++I AGFR YKI G+ SIIEV+P*
Sbjct: 372 ETQVLFDLFIMTINGAERDEKEWKKIIFEAGFRSYKIMPVLGVRSIIEVYP* 527
Score = 63.8 bits (133), Expect(3) = 1e-026
Identities = 19/39 (48%), Positives = 30/39 (76%)
Frame = +2 / +3
Query: 116 LSFHGGDMFEHIPSADALMLKWILHDWDEDKCIKIMERC 232
+ + GDMFE +PSA+ + LKW+LHDW + +C+KI++ C
Sbjct: 171 VKYIAGDMFESVPSANVVFLKWVLHDWGDAECVKILKNC 287
Score = 29.9 bits (59), Expect(3) = 1e-026
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +2 / +3
Query: 59 CTVMDLPHVVAEAPAGT 109
C+V+DLP+VVA AP T
Sbjct: 117 CSVLDLPNVVAVAPTDT 167
>gb|AW923055.1|AW923055 DG1_48_G01.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 690
Score = 64.8 bits (135), Expect(3) = 1e-026
Identities = 28/52 (53%), Positives = 35/52 (67%)
Frame = +2 / +2
Query: 335 ETYVLDLHILSFVNGAEREEHEWRRIFLAAGFRDYKITHTRGIPSIIEVFP* 490
ET VL + +NGAER+E EW++I AGFR YKI G+ SIIEV+P*
Sbjct: 293 ETQVLFDLFIMTINGAERDEKEWKKIIFEAGFRSYKIMPVLGVRSIIEVYP* 448
Score = 63.8 bits (133), Expect(3) = 1e-026
Identities = 19/39 (48%), Positives = 30/39 (76%)
Frame = +2 / +2
Query: 116 LSFHGGDMFEHIPSADALMLKWILHDWDEDKCIKIMERC 232
+ + GDMFE +PSA+ + LKW+LHDW + +C+KI++ C
Sbjct: 92 VKYIAGDMFESVPSANVVFLKWVLHDWGDAECVKILKNC 208
Score = 29.9 bits (59), Expect(3) = 1e-026
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +2 / +2
Query: 59 CTVMDLPHVVAEAPAGT 109
C+V+DLP+VVA AP T
Sbjct: 38 CSVLDLPNVVAVAPTDT 88
>gb|CN149045.1|CN149045 WOUND1_60_H10.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_60_H10_A002 3', mRNA sequence
Length = 681
Score = 64.8 bits (135), Expect(3) = 1e-026
Identities = 28/52 (53%), Positives = 35/52 (67%)
Frame = +2 / +3
Query: 335 ETYVLDLHILSFVNGAEREEHEWRRIFLAAGFRDYKITHTRGIPSIIEVFP* 490
ET VL + +NGAER+E EW++I AGFR YKI G+ SIIEV+P*
Sbjct: 306 ETQVLFDLFIMTINGAERDEKEWKKIIFEAGFRSYKIMPVLGVRSIIEVYP* 461
Score = 63.8 bits (133), Expect(3) = 1e-026
Identities = 19/39 (48%), Positives = 30/39 (76%)
Frame = +2 / +3
Query: 116 LSFHGGDMFEHIPSADALMLKWILHDWDEDKCIKIMERC 232
+ + GDMFE +PSA+ + LKW+LHDW + +C+KI++ C
Sbjct: 105 VKYIAGDMFESVPSANVVFLKWVLHDWGDAECVKILKNC 221
Score = 29.9 bits (59), Expect(3) = 1e-026
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +2 / +3
Query: 59 CTVMDLPHVVAEAPAGT 109
C+V+DLP+VVA AP T
Sbjct: 51 CSVLDLPNVVAVAPTDT 101
>gb|CX618728.1|CX618728 GABR1_41_G07.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_41_G07_A002 3', mRNA sequence
Length = 669
Score = 64.8 bits (135), Expect(3) = 1e-026
Identities = 28/52 (53%), Positives = 35/52 (67%)
Frame = +2 / +1
Query: 335 ETYVLDLHILSFVNGAEREEHEWRRIFLAAGFRDYKITHTRGIPSIIEVFP* 490
ET VL + +NGAER+E EW++I AGFR YKI G+ SIIEV+P*
Sbjct: 292 ETQVLFDLFIMTINGAERDEKEWKKIIFEAGFRSYKIMPVLGVRSIIEVYP* 447
Score = 63.8 bits (133), Expect(3) = 1e-026
Identities = 19/39 (48%), Positives = 30/39 (76%)
Frame = +2 / +1
Query: 116 LSFHGGDMFEHIPSADALMLKWILHDWDEDKCIKIMERC 232
+ + GDMFE +PSA+ + LKW+LHDW + +C+KI++ C
Sbjct: 91 VKYIAGDMFESVPSANVVFLKWVLHDWGDAECVKILKNC 207
Score = 29.9 bits (59), Expect(3) = 1e-026
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +2 / +1
Query: 59 CTVMDLPHVVAEAPAGT 109
C+V+DLP+VVA AP T
Sbjct: 37 CSVLDLPNVVAVAPTDT 87
>gb|CX607042.1|CX607042 ANR1_6_H06.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_6_H06_A002 3', mRNA sequence
Length = 733
Score = 67.0 bits (140), Expect(3) = 7e-022
Identities = 33/56 (58%), Positives = 38/56 (67%)
Frame = -2 / -2
Query: 297 DPSTVSIIITFPPASLPPIASLQRSIILMHLSSSQSCRIHLSMSASADGMCSNMSP 130
DP+T+SIII FPPAS IA LQ IL H SS QSCR +L +A A G+ NMSP
Sbjct: 342 DPTTISIIIIFPPASRGGIAFLQFFSILTHSSSFQSCRTNLRNTAFAGGIL*NMSP 175
Score = 62.0 bits (129), Expect(3) = 7e-026
Identities = 25/52 (48%), Positives = 36/52 (69%)
Frame = +2 / +2
Query: 335 ETYVLDLHILSFVNGAEREEHEWRRIFLAAGFRDYKITHTRGIPSIIEVFP* 490
ET +L ++ +NG ER+E EW++I AGF+DYKI G+ SIIE++P*
Sbjct: 377 ETQILKDLMMMNINGLERDEQEWKKISFKAGFKDYKIIPLLGVRSIIELYP* 532
Score = 60.6 bits (126), Expect(3) = 7e-026
Identities = 19/34 (55%), Positives = 29/34 (85%)
Frame = +2 / +2
Query: 131 GDMFEHIPSADALMLKWILHDWDEDKCIKIMERC 232
GDMF+ IP A+A+ LK +LHDW++D+C+KI++ C
Sbjct: 176 GDMFQSIPPANAVFLKLVLHDWNDDECVKILKNC 277
Score = 47.8 bits (98), Expect(3) = 7e-022
Identities = 23/52 (44%), Positives = 33/52 (63%)
Frame = -2 / -2
Query: 486 GKTSMMDGMPRVCVIL*SRNPAARKILLHSCSSRSAPFTKLSMWRSNTYVSL 331
G +S+++ PR +IL*S NPA ++I HSCSSRS+P + M VS+
Sbjct: 528 G*SSIIERTPRSGMIL*SLNPALKEIFFHSCSSRSSPLIFIIMRSFKICVSI 373
Score = 33.6 bits (67), Expect(3) = 7e-026
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = +2 / +2
Query: 56 RCTVMDLPHVVAEAPAGT 109
+CTV+DLP VVA+AP T
Sbjct: 104 KCTVLDLPQVVAKAPTDT 157
Score = 27.6 bits (54), Expect(3) = 7e-022
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = -2 / -2
Query: 108 VPAGASATTWGRSMTVH 58
V GA ATT GRS TVH
Sbjct: 156 VSVGALATTCGRSSTVH 106
>gb|CX620993.1|CX620993 GABR1_55_G09.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_55_G09_A002 3', mRNA sequence
Length = 667
Score = 62.0 bits (129), Expect(3) = 7e-026
Identities = 25/52 (48%), Positives = 36/52 (69%)
Frame = +2 / +1
Query: 335 ETYVLDLHILSFVNGAEREEHEWRRIFLAAGFRDYKITHTRGIPSIIEVFP* 490
ET +L ++ +NG ER+E EW++I AGF+DYKI G+ SIIE++P*
Sbjct: 289 ETQILKDLMMMNINGLERDEQEWKKISFKAGFKDYKIIPLLGVRSIIELYP* 444
Score = 60.6 bits (126), Expect(3) = 7e-026
Identities = 19/34 (55%), Positives = 29/34 (85%)
Frame = +2 / +1
Query: 131 GDMFEHIPSADALMLKWILHDWDEDKCIKIMERC 232
GDMF+ IP A+A+ LK +LHDW++D+C+KI++ C
Sbjct: 88 GDMFQSIPPANAVFLKLVLHDWNDDECVKILKNC 189
Score = 33.6 bits (67), Expect(3) = 7e-026
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = +2 / +1
Query: 56 RCTVMDLPHVVAEAPAGT 109
+CTV+DLP VVA+AP T
Sbjct: 16 KCTVLDLPQVVAKAPTDT 69
>gb|CN144107.1|CN144107 WOUND1_20_E12.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_20_E12_A002 3', mRNA sequence
Length = 473
Score = 71.2 bits (149), Expect(2) = 1e-025
Identities = 30/53 (56%), Positives = 37/53 (69%)
Frame = +2 / +1
Query: 332 RETYVLDLHILSFVNGAEREEHEWRRIFLAAGFRDYKITHTRGIPSIIEVFP* 490
+ET VL + FVNG ER+E EW++I AGFRDYKI G+ SIIEV+P*
Sbjct: 268 KETQVLFDLFIMFVNGVERDEQEWKKIIFEAGFRDYKIIPVLGVRSIIEVYP* 426
Score = 69.8 bits (146), Expect(2) = 3e-024
Identities = 33/55 (60%), Positives = 38/55 (69%)
Frame = -2 / -1
Query: 294 PSTVSIIITFPPASLPPIASLQRSIILMHLSSSQSCRIHLSMSASADGMCSNMSP 130
P T+S IITFPPASL IA LQ IL+ +S QSC+ HL +A A GM SNMSP
Sbjct: 242 PITISRIITFPPASLEGIAFLQFFSILIQSASPQSCKTHLRKTAFAGGMLSNMSP 78
Score = 66.6 bits (139), Expect(2) = 1e-025
Identities = 27/81 (33%), Positives = 40/81 (49%)
Frame = +2 / +1
Query: 86 VAEAPAGTAGLSFHGGDMFEHIPSADALMLKWILHDWDEDKCIKIMERCXXXXXXXXXXX 265
VA + + + GDMFE IP A+A+ LKW+LHDW + CIKI++ C
Sbjct: 34 VAANAPTSTDVKYVAGDMFESIPPANAVFLKWVLHDWGDADCIKILKNCKNAIPSRDAGG 213
Query: 266 XXXXXDTVLGSRAXXXXXXKT 328
D V+G ++ +T
Sbjct: 214 KVIILDMVMGGQSSNIKHKET 276
Score = 63.4 bits (132), Expect(2) = 3e-024
Identities = 29/55 (52%), Positives = 37/55 (67%)
Frame = -2 / -1
Query: 495 HHHGKTSMMDGMPRVCVIL*SRNPAARKILLHSCSSRSAPFTKLSMWRSNTYVSL 331
+++G TSMMD PR +IL*S NPA++ I HSCSSRS P T + + T VSL
Sbjct: 431 NNYG*TSMMDRTPRTGMIL*SLNPASKMIFFHSCSSRSTPLTNMMKRSNKT*VSL 267
>gb|CN150018.1|CN150018 WOUND1_66_H09.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_66_H09_A002 3', mRNA sequence
Length = 688
Score = 63.4 bits (132), Expect(3) = 2e-025
Identities = 19/39 (48%), Positives = 29/39 (74%)
Frame = +2 / +3
Query: 116 LSFHGGDMFEHIPSADALMLKWILHDWDEDKCIKIMERC 232
+ + GDMFE +PSA + LKW+LHDW + +C+KI++ C
Sbjct: 96 VKYIAGDMFESVPSASVVFLKWVLHDWGDAECVKILKNC 212
Score = 61.6 bits (128), Expect(3) = 2e-025
Identities = 26/52 (50%), Positives = 35/52 (67%)
Frame = +2 / +3
Query: 335 ETYVLDLHILSFVNGAEREEHEWRRIFLAAGFRDYKITHTRGIPSIIEVFP* 490
E+ VL + +NGAER+E EW++I AGFR YKI G+ SI+EV+P*
Sbjct: 297 ESQVLFDLFIMTINGAERDEKEWKKIIFEAGFRSYKIMPVLGVRSIMEVYP* 452
Score = 29.9 bits (59), Expect(3) = 2e-025
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +2 / +3
Query: 59 CTVMDLPHVVAEAPAGT 109
C+V+DLP+VVA AP T
Sbjct: 42 CSVLDLPNVVAVAPTDT 92
>gb|CX606124.1|CX606124 ANR1_1_F10.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_1_F10_A002 3', mRNA sequence
Length = 675
Score = 69.8 bits (146), Expect(2) = 3e-023
Identities = 33/56 (58%), Positives = 39/56 (69%)
Frame = -2 / -1
Query: 297 DPSTVSIIITFPPASLPPIASLQRSIILMHLSSSQSCRIHLSMSASADGMCSNMSP 130
DP+T+S+IITFPP S IA LQ IL SS QSCRIHL +ASA G+ N+SP
Sbjct: 195 DPTTISMIITFPPTSRGGIACLQFFSILTQSSSFQSCRIHLRNTASAGGIL*NISP 28
Score = 68.9 bits (144), Expect(2) = 4e-025
Identities = 22/39 (56%), Positives = 31/39 (79%)
Frame = +2 / +2
Query: 116 LSFHGGDMFEHIPSADALMLKWILHDWDEDKCIKIMERC 232
+ + GDMF+ IP ADA+ LKWILHDW++D C+KI++ C
Sbjct: 14 VQYVAGDMFQSIPPADAVFLKWILHDWNDDDCVKILKNC 130
Score = 67.0 bits (140), Expect(2) = 4e-025
Identities = 28/52 (53%), Positives = 38/52 (73%)
Frame = +2 / +2
Query: 335 ETYVLDLHILSFVNGAEREEHEWRRIFLAAGFRDYKITHTRGIPSIIEVFP* 490
ET VL ++ ++GAER+E EW++IFL AGF DYKI G+ SIIE++P*
Sbjct: 221 ETQVLFDLLVMTIDGAERDEQEWKKIFLEAGFEDYKIIPVLGVRSIIELYP* 376
Score = 59.7 bits (124), Expect(2) = 3e-023
Identities = 28/55 (50%), Positives = 37/55 (67%)
Frame = -2 / -1
Query: 486 GKTSMMDGMPRVCVIL*SRNPAARKILLHSCSSRSAPFTKLSMWRSNTYVSLHVL 322
G +SM+D PR +IL*S NPA++KI HSCSSRSAP ++ + T VS +L
Sbjct: 372 G*SSMIDRTPRTGIIL*SSNPASKKIFFHSCSSRSAPSIVMTKRSNKTCVSTCLL 208
>gb|BG102714.1|BG102714 RHIZ2_36_D11.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 632
Score = 72.1 bits (151), Expect(2) = 6e-025
Identities = 34/55 (61%), Positives = 39/55 (70%)
Frame = -2 / -2
Query: 294 PSTVSIIITFPPASLPPIASLQRSIILMHLSSSQSCRIHLSMSASADGMCSNMSP 130
P T+S IITFPPASL IA LQ IL+ +S QSC+ HL +ASA GM SNMSP
Sbjct: 373 PITISRIITFPPASLGGIAFLQFFSILIQSASPQSCKTHLRKTASAGGMLSNMSP 209
Score = 68.4 bits (143), Expect(2) = 1e-024
Identities = 29/53 (54%), Positives = 36/53 (67%)
Frame = +2 / +3
Query: 332 RETYVLDLHILSFVNGAEREEHEWRRIFLAAGFRDYKITHTRGIPSIIEVFP* 490
+ET VL + FVNG ER+E EW++I AGF DYKI G+ SIIEV+P*
Sbjct: 399 KETQVLFDLFIMFVNGVERDEQEWKKIIFEAGFSDYKIIPVLGVRSIIEVYP* 557
Score = 66.1 bits (138), Expect(2) = 1e-024
Identities = 24/49 (48%), Positives = 32/49 (65%)
Frame = +2 / +3
Query: 86 VAEAPAGTAGLSFHGGDMFEHIPSADALMLKWILHDWDEDKCIKIMERC 232
VA + + + GDMFE IP ADA+ LKW+LHDW + CIKI++ C
Sbjct: 165 VAANAPTSTDVKYVAGDMFESIPPADAVFLKWVLHDWGDADCIKILKNC 311
Score = 63.4 bits (132), Expect(2) = 6e-025
Identities = 29/55 (52%), Positives = 37/55 (67%)
Frame = -2 / -2
Query: 495 HHHGKTSMMDGMPRVCVIL*SRNPAARKILLHSCSSRSAPFTKLSMWRSNTYVSL 331
+++G TSMMD PR +IL*S NPA++ I HSCSSRS P T + + T VSL
Sbjct: 562 NNYG*TSMMDRTPRTGMIL*SLNPASKMIFFHSCSSRSTPLTNMMKRSNKT*VSL 398
>gb|BG558734.1|BG558734 RHIZ2_59_G10.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 532
Score = 73.5 bits (154), Expect(2) = 7e-024
Identities = 34/56 (60%), Positives = 39/56 (69%)
Frame = -2 / -1
Query: 297 DPSTVSIIITFPPASLPPIASLQRSIILMHLSSSQSCRIHLSMSASADGMCSNMSP 130
DP+T+S II PPASL IA LQ IL+H SS QSC+IHL +A A GM NMSP
Sbjct: 187 DPTTISTIIALPPASLEGIACLQFFNILIHSSSPQSCKIHLRKTAFAGGML*NMSP 20
Score = 73.0 bits (153), Expect(2) = 6e-025
Identities = 28/71 (39%), Positives = 39/71 (54%)
Frame = +2 / +3
Query: 116 LSFHGGDMFEHIPSADALMLKWILHDWDEDKCIKIMERCXXXXXXXXXXXXXXXXDTVLG 295
+ F GDMF+ IP A+A+ LKWILHDW +D+CIKI++ C D V+G
Sbjct: 6 VQFVAGDMFQSIPPANAVFLKWILHDWGDDECIKILKNCKQAIPSRDAGGKAIIVDIVVG 185
Query: 296 SRAXXXXXXKT 328
S+ +T
Sbjct: 186 SKPSDTKLLET 218
Score = 62.5 bits (130), Expect(2) = 6e-025
Identities = 28/52 (53%), Positives = 36/52 (69%)
Frame = +2 / +3
Query: 335 ETYVLDLHILSFVNGAEREEHEWRRIFLAAGFRDYKITHTRGIPSIIEVFP* 490
ET VL + V GAER+E EW+++FL AGF+DY I G+ SIIEV+P*
Sbjct: 213 ETQVLCDLNMMKVGGAERDEQEWKKLFLEAGFKDYNIMPVLGLWSIIEVYP* 368
Score = 58.3 bits (121), Expect(2) = 7e-024
Identities = 28/52 (53%), Positives = 33/52 (63%)
Frame = -2 / -1
Query: 489 HGKTSMMDGMPRVCVIL*SRNPAARKILLHSCSSRSAPFTKLSMWRSNTYVS 334
HG TSM+D PR +IL*S NPA+R HSCSS SAP T + +T VS
Sbjct: 367 HGYTSMIDQRPRTGIIL*SLNPASRNSFFHSCSSLSAPPTFIIFRSHSTCVS 212
>gb|CN148282.1|CN148282 WOUND1_55_G06.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_55_G06_A002 3', mRNA sequence
Length = 741
Score = 69.8 bits (146), Expect(2) = 3e-024
Identities = 33/55 (60%), Positives = 38/55 (69%)
Frame = -2 / -2
Query: 294 PSTVSIIITFPPASLPPIASLQRSIILMHLSSSQSCRIHLSMSASADGMCSNMSP 130
P T+S IITFPPASL IA LQ IL+ +S QSC+ HL +A A GM SNMSP
Sbjct: 512 PITISRIITFPPASLEGIAFLQFFSILIQSASPQSCKTHLRKTAFAGGMLSNMSP 348
Score = 68.4 bits (143), Expect(2) = 8e-025
Identities = 29/53 (54%), Positives = 36/53 (67%)
Frame = +2 / +1
Query: 332 RETYVLDLHILSFVNGAEREEHEWRRIFLAAGFRDYKITHTRGIPSIIEVFP* 490
+ET VL + FVNG ER+E EW++I AGF DYKI G+ SIIEV+P*
Sbjct: 538 KETQVLFDLFIMFVNGVERDEQEWKKIIFEAGFSDYKIIPVLGVRSIIEVYP* 696
Score = 66.6 bits (139), Expect(2) = 8e-025
Identities = 27/81 (33%), Positives = 40/81 (49%)
Frame = +2 / +1
Query: 86 VAEAPAGTAGLSFHGGDMFEHIPSADALMLKWILHDWDEDKCIKIMERCXXXXXXXXXXX 265
VA + + + GDMFE IP A+A+ LKW+LHDW + CIKI++ C
Sbjct: 304 VAANAPTSTDVKYVAGDMFESIPPANAVFLKWVLHDWGDADCIKILKNCKNAIPSRDAGG 483
Query: 266 XXXXXDTVLGSRAXXXXXXKT 328
D V+G ++ +T
Sbjct: 484 KVIILDMVMGGQSSNIKHKET 546
Score = 63.4 bits (132), Expect(2) = 3e-024
Identities = 29/55 (52%), Positives = 37/55 (67%)
Frame = -2 / -2
Query: 495 HHHGKTSMMDGMPRVCVIL*SRNPAARKILLHSCSSRSAPFTKLSMWRSNTYVSL 331
+++G TSMMD PR +IL*S NPA++ I HSCSSRS P T + + T VSL
Sbjct: 701 NNYG*TSMMDRTPRTGMIL*SLNPASKMIFFHSCSSRSTPLTNMMKRSNKT*VSL 537
>gb|BE596903.1|BE596903 PI1_60_A01.g1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 676
Score = 67.5 bits (141), Expect(2) = 1e-024
Identities = 28/52 (53%), Positives = 37/52 (71%)
Frame = +2 / +1
Query: 335 ETYVLDLHILSFVNGAEREEHEWRRIFLAAGFRDYKITHTRGIPSIIEVFP* 490
ET VL I+ +NG ER+E EW++IF AGF+DYKI G+ SIIE++P*
Sbjct: 256 ETQVLHDIIMMNLNGIERDEQEWKKIFFEAGFKDYKIIQLLGVRSIIELYP* 411
Score = 67.0 bits (140), Expect(2) = 1e-024
Identities = 21/40 (52%), Positives = 33/40 (82%)
Frame = +2 / +1
Query: 113 GLSFHGGDMFEHIPSADALMLKWILHDWDEDKCIKIMERC 232
G+ + GD+F+ IP A+A+ LKWILHDW++D+C+KI++ C
Sbjct: 46 GVQYVVGDIFQSIPPANAVFLKWILHDWNDDECVKILKNC 165
Score = 64.8 bits (135), Expect(2) = 3e-022
Identities = 29/67 (43%), Positives = 41/67 (61%)
Frame = -2 / -3
Query: 534 HVQTCIYDRLSIHHHHGKTSMMDGMPRVCVIL*SRNPAARKILLHSCSSRSAPFTKLSMW 355
HV + +++ G +S+++ PR C+IL*S NPA++KI HSCSSRS PF + M
Sbjct: 455 HVPMLLLFWMALPSFQG*SSIIERTPRSCIIL*SLNPASKKIFFHSCSSRSIPFKFIMMM 276
Query: 354 RSNTYVS 334
T VS
Sbjct: 275 SCKTCVS 255
Score = 61.6 bits (128), Expect(2) = 3e-022
Identities = 32/56 (57%), Positives = 37/56 (66%)
Frame = -2 / -3
Query: 297 DPSTVSIIITFPPASLPPIASLQRSIILMHLSSSQSCRIHLSMSASADGMCSNMSP 130
DP+T+SIII FPPAS IA LQ IL H SS QS RIHL +A A G+ +SP
Sbjct: 230 DPTTISIIIIFPPASRGGIAFLQFFNILTHSSSFQS*RIHLRNTAFAGGIL*KISP 63
>gb|CN150569.1|CN150569 WOUND1_70_C05.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_70_C05_A002 3', mRNA sequence
Length = 749
Score = 68.4 bits (143), Expect(2) = 3e-024
Identities = 29/53 (54%), Positives = 36/53 (67%)
Frame = +2 / +3
Query: 332 RETYVLDLHILSFVNGAEREEHEWRRIFLAAGFRDYKITHTRGIPSIIEVFP* 490
+ET VL + FVNG ER+E EW++I AGF DYKI G+ SIIEV+P*
Sbjct: 444 KETQVLFDLFIMFVNGVERDEQEWKKIIFEAGFSDYKIIPVLGVRSIIEVYP* 602
Score = 67.5 bits (141), Expect(2) = 1e-023
Identities = 32/55 (58%), Positives = 37/55 (67%)
Frame = -2 / -2
Query: 294 PSTVSIIITFPPASLPPIASLQRSIILMHLSSSQSCRIHLSMSASADGMCSNMSP 130
P T+S IITFPPASL IA LQ IL+ + QSC+ HL +A A GM SNMSP
Sbjct: 418 PITISRIITFPPASLEGIAFLQFFSILIQSAPPQSCKTHLRKTAFAGGMLSNMSP 254
Score = 64.8 bits (135), Expect(2) = 3e-024
Identities = 27/81 (33%), Positives = 39/81 (48%)
Frame = +2 / +3
Query: 86 VAEAPAGTAGLSFHGGDMFEHIPSADALMLKWILHDWDEDKCIKIMERCXXXXXXXXXXX 265
VA + + + GDMFE IP A+A+ LKW+LHDW CIKI++ C
Sbjct: 210 VAANAPTSTDVKYVAGDMFESIPPANAVFLKWVLHDWGGADCIKILKNCKNAIPSRDAGG 389
Query: 266 XXXXXDTVLGSRAXXXXXXKT 328
D V+G ++ +T
Sbjct: 390 KVIILDMVMGGQSSNIKHKET 452
Score = 63.4 bits (132), Expect(2) = 1e-023
Identities = 29/55 (52%), Positives = 37/55 (67%)
Frame = -2 / -2
Query: 495 HHHGKTSMMDGMPRVCVIL*SRNPAARKILLHSCSSRSAPFTKLSMWRSNTYVSL 331
+++G TSMMD PR +IL*S NPA++ I HSCSSRS P T + + T VSL
Sbjct: 607 NNYG*TSMMDRTPRTGMIL*SLNPASKMIFFHSCSSRSTPLTNMMKRSNKT*VSL 443
>gb|BG052711.1|BG052711 RHIZ2_28_G08.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 469
Score = 68.9 bits (144), Expect(2) = 5e-024
Identities = 33/55 (60%), Positives = 38/55 (69%)
Frame = -2 / -1
Query: 294 PSTVSIIITFPPASLPPIASLQRSIILMHLSSSQSCRIHLSMSASADGMCSNMSP 130
P T+S IITF PASL IA LQ IL+ +S QSC+ HL +ASA GM SNMSP
Sbjct: 184 PITISRIITFSPASLGGIAFLQLFSILIQSASPQSCKTHLRKTASAGGMLSNMSP 20
Score = 66.6 bits (139), Expect(2) = 7e-024
Identities = 29/53 (54%), Positives = 35/53 (66%)
Frame = +2 / +3
Query: 332 RETYVLDLHILSFVNGAEREEHEWRRIFLAAGFRDYKITHTRGIPSIIEVFP* 490
+ET VL + FVNG ER E EW++I AGF DYKI G+ SIIEV+P*
Sbjct: 210 KETQVLFDLFIMFVNGVERYEQEWKKIIFEAGFSDYKIIPVLGVRSIIEVYP* 368
Score = 65.2 bits (136), Expect(2) = 7e-024
Identities = 22/39 (56%), Positives = 28/39 (71%)
Frame = +2 / +3
Query: 116 LSFHGGDMFEHIPSADALMLKWILHDWDEDKCIKIMERC 232
+ + GDMFE IP ADA+ LKW+LHDW + CIKI+ C
Sbjct: 6 VKYVAGDMFESIPPADAVFLKWVLHDWGDADCIKILNNC 122
Score = 63.4 bits (132), Expect(2) = 5e-024
Identities = 28/55 (50%), Positives = 37/55 (67%)
Frame = -2 / -1
Query: 495 HHHGKTSMMDGMPRVCVIL*SRNPAARKILLHSCSSRSAPFTKLSMWRSNTYVSL 331
+++G TSMMD PR +IL*S NPA++ I HSCS RS P T + + T+VSL
Sbjct: 373 NNYG*TSMMDRTPRTGMIL*SLNPASKMIFFHSCSYRSTPLTNMMKRSNKTWVSL 209
>gb|CN129547.1|CN129547 RHOH1_36_B08.b3_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_36_B08_A002 3', mRNA sequence
Length = 793
Score = 62.0 bits (129), Expect(3) = 1e-023
Identities = 25/52 (48%), Positives = 36/52 (69%)
Frame = +2 / +1
Query: 335 ETYVLDLHILSFVNGAEREEHEWRRIFLAAGFRDYKITHTRGIPSIIEVFP* 490
ET +L ++ +NG ER+E EW++I AGF+DYKI G+ SIIE++P*
Sbjct: 490 ETQILKDLMMMNINGLERDEQEWKKISFKAGFKDYKIIPLLGVRSIIELYP* 645
Score = 53.3 bits (110), Expect(3) = 1e-023
Identities = 15/31 (48%), Positives = 26/31 (83%)
Frame = +2 / +1
Query: 140 FEHIPSADALMLKWILHDWDEDKCIKIMERC 232
+ H+P A+A+ LK +LHDW++D+C+KI++ C
Sbjct: 298 WRHVPPANAVFLKLVLHDWNDDECVKILKNC 390
Score = 33.6 bits (67), Expect(3) = 1e-023
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = +2 / +2
Query: 56 RCTVMDLPHVVAEAPAGT 109
+CTV+DLP VVA+AP T
Sbjct: 227 KCTVLDLPQVVAKAPTDT 280
>gb|CF431162.1|CF431162 NIT1_6_C08.b1_A002 Nitrogen-deficient seedlings Sorghum bicolor
cDNA clone NIT1_6_C08_A002 3', mRNA sequence
Length = 487
Score = 66.6 bits (139), Expect(2) = 1e-023
Identities = 22/39 (56%), Positives = 31/39 (79%)
Frame = +2 / +1
Query: 116 LSFHGGDMFEHIPSADALMLKWILHDWDEDKCIKIMERC 232
+ + GDMFE IPSA+A+ LKWILHDW + +C+KI++ C
Sbjct: 28 VKYIAGDMFESIPSANAVFLKWILHDWGDAECVKILKNC 144
Score = 64.3 bits (134), Expect(2) = 1e-023
Identities = 27/52 (51%), Positives = 35/52 (67%)
Frame = +2 / +1
Query: 335 ETYVLDLHILSFVNGAEREEHEWRRIFLAAGFRDYKITHTRGIPSIIEVFP* 490
ET +L + F+NGAER+E EW++I AGF YKI G+ SIIEV+P*
Sbjct: 229 ETQILFDLFMMFINGAERDELEWKKIIFEAGFSSYKIIPVLGVRSIIEVYP* 384
>gb|CF431021.1|CF431021 NIT1_4_H02.b1_A002 Nitrogen-deficient seedlings Sorghum bicolor
cDNA clone NIT1_4_H02_A002 3', mRNA sequence
Length = 651
Score = 70.7 bits (148), Expect(2) = 9e-021
Identities = 34/56 (60%), Positives = 38/56 (67%)
Frame = -2 / -1
Query: 297 DPSTVSIIITFPPASLPPIASLQRSIILMHLSSSQSCRIHLSMSASADGMCSNMSP 130
DP+T+SIII FPPAS IA LQ IL H SS QSCRIHL +A A G+ MSP
Sbjct: 207 DPTTISIIIIFPPASRGGIACLQFFSILTHSSSCQSCRIHLRNTAFAGGIL*KMSP 40
Score = 65.7 bits (137), Expect(2) = 2e-023
Identities = 28/52 (53%), Positives = 37/52 (71%)
Frame = +2 / +2
Query: 335 ETYVLDLHILSFVNGAEREEHEWRRIFLAAGFRDYKITHTRGIPSIIEVFP* 490
ET VL ++ VNG ER+E+EW+ IF AGF+DYKI G+ SIIE++P*
Sbjct: 233 ETQVLFDLMMMNVNGVERDENEWKNIFFEAGFKDYKIIPLLGVRSIIELYP* 388
Score = 64.3 bits (134), Expect(2) = 2e-023
Identities = 20/34 (58%), Positives = 29/34 (85%)
Frame = +2 / +2
Query: 131 GDMFEHIPSADALMLKWILHDWDEDKCIKIMERC 232
GD+F+ IP A+A+ LKWILHDW +D+C+KI++ C
Sbjct: 41 GDIFQSIPPANAVFLKWILHDWHDDECVKILKNC 142
Score = 50.6 bits (104), Expect(2) = 9e-021
Identities = 24/52 (46%), Positives = 35/52 (67%)
Frame = -2 / -1
Query: 486 GKTSMMDGMPRVCVIL*SRNPAARKILLHSCSSRSAPFTKLSMWRSNTYVSL 331
G +S+++ PR +IL*S NPA++K+ HS SSRS P T + M + T VS+
Sbjct: 384 G*SSIIERTPRSGMIL*SLNPASKKMFFHSFSSRSTPLTFIIMRSNKTCVSM 229
>gb|BM328717.1|BM328717 PIC1_25_G03.g1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 556
Score = 81.7 bits (172), Expect(2) = 2e-023
Identities = 39/69 (56%), Positives = 46/69 (66%)
Frame = -2 / -3
Query: 297 DPSTVSIIITFPPASLPPIASLQRSIILMHLSSSQSCRIHLSMSASADGMCSNMSPPWKD 118
DPST+S+I FPPASL IASLQ IL LSSSQ C+ +LS +ASA GM SNMSP
Sbjct: 209 DPSTISVITNFPPASLAGIASLQFLRILTQLSSSQQCKTYLSKTASAGGMDSNMSPATNC 30
Query: 117 RPAVPAGAS 91
+ P A+
Sbjct: 29 TSSPPPAAT 3
Score = 48.3 bits (99), Expect(2) = 2e-023
Identities = 21/39 (53%), Positives = 26/39 (66%)
Frame = -2 / -3
Query: 492 HHGKTSMMDGMPRVCVIL*SRNPAARKILLHSCSSRSAP 376
+ G TS+ + P + VIL*S NPA+ KI HSCSSR P
Sbjct: 395 YQG*TSITESGPMIGVIL*SLNPASTKIFFHSCSSRPTP 279
>gb|CN150014.1|CN150014 WOUND1_66_H05.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_66_H05_A002 3', mRNA sequence
Length = 627
Score = 64.8 bits (135), Expect(2) = 6e-023
Identities = 28/52 (53%), Positives = 35/52 (67%)
Frame = +2 / +3
Query: 335 ETYVLDLHILSFVNGAEREEHEWRRIFLAAGFRDYKITHTRGIPSIIEVFP* 490
ET VL + +NGAER+E EW++I AGFR YKI G+ SIIEV+P*
Sbjct: 243 ETQVLFDLFIMTINGAERDEKEWKKIIFEAGFRSYKIMPVLGVRSIIEVYP* 398
Score = 63.8 bits (133), Expect(2) = 6e-023
Identities = 19/39 (48%), Positives = 30/39 (76%)
Frame = +2 / +3
Query: 116 LSFHGGDMFEHIPSADALMLKWILHDWDEDKCIKIMERC 232
+ + GDMFE +PSA+ + LKW+LHDW + +C+KI++ C
Sbjct: 42 VKYIAGDMFESVPSANVVFLKWVLHDWGDAECVKILKNC 158
>gb|CD234204.1|CD234204 SS1_26_B02.b1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_26_B02_A012 3', mRNA sequence
Length = 618
Score = 64.8 bits (135), Expect(2) = 6e-023
Identities = 28/52 (53%), Positives = 35/52 (67%)
Frame = +2 / +2
Query: 335 ETYVLDLHILSFVNGAEREEHEWRRIFLAAGFRDYKITHTRGIPSIIEVFP* 490
ET VL + +NGAER+E EW++I AGFR YKI G+ SIIEV+P*
Sbjct: 239 ETQVLFDLFIMTINGAERDEKEWKKIIFEAGFRSYKIMPVLGVRSIIEVYP* 394
Score = 63.8 bits (133), Expect(2) = 6e-023
Identities = 19/39 (48%), Positives = 30/39 (76%)
Frame = +2 / +2
Query: 116 LSFHGGDMFEHIPSADALMLKWILHDWDEDKCIKIMERC 232
+ + GDMFE +PSA+ + LKW+LHDW + +C+KI++ C
Sbjct: 38 VKYIAGDMFESVPSANVVFLKWVLHDWGDAECVKILKNC 154
>gb|CN141678.1|CN141678 WOUND1_1_E01.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_1_E01_A002 3', mRNA sequence
Length = 584
Score = 64.8 bits (135), Expect(2) = 6e-023
Identities = 28/52 (53%), Positives = 35/52 (67%)
Frame = +2 / +3
Query: 335 ETYVLDLHILSFVNGAEREEHEWRRIFLAAGFRDYKITHTRGIPSIIEVFP* 490
ET VL + +NGAER+E EW++I AGFR YKI G+ SIIEV+P*
Sbjct: 204 ETQVLFDLFIMTINGAERDEKEWKKIIFEAGFRSYKIMPVPGVRSIIEVYP* 359
Score = 63.8 bits (133), Expect(2) = 6e-023
Identities = 19/39 (48%), Positives = 30/39 (76%)
Frame = +2 / +3
Query: 116 LSFHGGDMFEHIPSADALMLKWILHDWDEDKCIKIMERC 232
+ + GDMFE +PSA+ + LKW+LHDW + +C+KI++ C
Sbjct: 3 VKYIAGDMFESVPSANVVFLKWVLHDWGDAECVKILKNC 119
>gb|BE360969.1|BE360969 DG1_68_C08.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 635
Score = 82.2 bits (173), Expect(2) = 8e-023
Identities = 39/72 (54%), Positives = 47/72 (65%)
Frame = -2 / -2
Query: 297 DPSTVSIIITFPPASLPPIASLQRSIILMHLSSSQSCRIHLSMSASADGMCSNMSPPWKD 118
DPST+S+I FPPASL IASLQ IL LSSSQ C+ +LS +ASA GM SNMSP
Sbjct: 343 DPSTISVITNFPPASLAGIASLQFLRILTQLSSSQQCKTYLSKTASAGGMDSNMSPATNC 164
Query: 117 RPAVPAGASATT 82
+ P A+ +
Sbjct: 163 TSSPPPAATGAS 128
Score = 73.5 bits (154), Expect(3) = 9e-021
Identities = 34/99 (34%), Positives = 47/99 (47%)
Frame = +2 / +3
Query: 95 APAGTAGLSFHGGDMFEHIPSADALMLKWILHDWDEDKCIKIMERCXXXXXXXXXXXXXX 274
A G + F GDMFE IP ADA++LK++LH WD+D C+KI++ C
Sbjct: 141 AAGGGDDVQFVAGDMFESIPPADAVLLKYVLHCWDDDNCVKILKNCKEAIPARDAGGKLV 320
Query: 275 XXDTVLGSRAXXXXXXKTCRETYVLDLHILSFVNGAERE 391
+ VLGS E + L L ++ V E E
Sbjct: 321 ITEMVLGSGPRRDRNVAETEEMHSLFLTCITGVGREEHE 437
Score = 46.0 bits (94), Expect(2) = 8e-023
Identities = 21/39 (53%), Positives = 25/39 (64%)
Frame = -2 / -2
Query: 492 HHGKTSMMDGMPRVCVIL*SRNPAARKILLHSCSSRSAP 376
+ G TS+ + P VIL*S NPA+ KI HSCSSR P
Sbjct: 529 YQG*TSITESGPITGVIL*SLNPASTKIFFHSCSSRPTP 413
Score = 37.7 bits (76), Expect(3) = 9e-021
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = +2 / +3
Query: 56 RCTVMDLPHVVAEAPAGTAG 115
+C VMDLPHVVA+AP G
Sbjct: 93 KCAVMDLPHVVADAPVAAGG 152
Score = 27.6 bits (54), Expect(3) = 9e-021
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +1 / +2
Query: 424 WVP*LQDHAHPRHPVHHRGLPVMMMDRESIIYA 522
W+ *LQ+H+ +RGLP+++ E +A
Sbjct: 461 WIQ*LQNHSSDGPAFGYRGLPLILALEEETNFA 559
>gb|CW255681.1|CW255681 104_720_11226371_148_35403_042 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11226371, DNA
sequence
Length = 706
Score = 64.8 bits (135), Expect(4) = 1e-022
Identities = 28/52 (53%), Positives = 35/52 (67%)
Frame = +2 / -1
Query: 335 ETYVLDLHILSFVNGAEREEHEWRRIFLAAGFRDYKITHTRGIPSIIEVFP* 490
ET VL + +NGAER+E EW++I AGFR YKI G+ SIIEV+P*
Sbjct: 217 ETQVLFDLFIMTINGAERDEKEWKKIIFEAGFRSYKIMPVLGVRSIIEVYP* 62
Score = 38.6 bits (78), Expect(4) = 1e-022
Identities = 9/22 (40%), Positives = 17/22 (77%)
Frame = +2 / -1
Query: 167 LMLKWILHDWDEDKCIKIMERC 232
+ +W+LHDW + +C+KI++ C
Sbjct: 367 IWFQWVLHDWGDAECVKILKNC 302
Score = 29.9 bits (59), Expect(4) = 1e-022
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +2 / -2
Query: 59 CTVMDLPHVVAEAPAGT 109
C+V+DLP+VVA AP T
Sbjct: 552 CSVLDLPNVVAVAPTDT 502
Score = 29.0 bits (57), Expect(4) = 1e-022
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +2 / -2
Query: 116 LSFHGGDMFEHIPSADALMLK 178
+ + GDMFE +PSA+ + LK
Sbjct: 498 VKYIAGDMFESVPSANVVFLK 436
>gb|CL152122.1|CL152122 104_335_10779735_116_31364_135 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10779735, DNA
sequence
Length = 699
Score = 64.8 bits (135), Expect(4) = 1e-022
Identities = 28/52 (53%), Positives = 35/52 (67%)
Frame = +2 / -2
Query: 335 ETYVLDLHILSFVNGAEREEHEWRRIFLAAGFRDYKITHTRGIPSIIEVFP* 490
ET VL + +NGAER+E EW++I AGFR YKI G+ SIIEV+P*
Sbjct: 332 ETQVLFDLFIMTINGAERDEKEWKKIIFEAGFRSYKIMPVLGVRSIIEVYP* 177
Score = 38.6 bits (78), Expect(4) = 1e-022
Identities = 9/22 (40%), Positives = 17/22 (77%)
Frame = +2 / -2
Query: 167 LMLKWILHDWDEDKCIKIMERC 232
+ +W+LHDW + +C+KI++ C
Sbjct: 482 IWFQWVLHDWGDAECVKILKNC 417
Score = 29.9 bits (59), Expect(4) = 1e-022
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +2 / -3
Query: 59 CTVMDLPHVVAEAPAGT 109
C+V+DLP+VVA AP T
Sbjct: 667 CSVLDLPNVVAVAPTDT 617
Score = 29.0 bits (57), Expect(4) = 1e-022
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +2 / -3
Query: 116 LSFHGGDMFEHIPSADALMLK 178
+ + GDMFE +PSA+ + LK
Sbjct: 613 VKYIAGDMFESVPSANVVFLK 551
>gb|CN150866.1|CN150866 WOUND1_72_A06.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_72_A06_A002 3', mRNA sequence
Length = 725
Score = 65.7 bits (137), Expect(3) = 1e-022
Identities = 21/39 (53%), Positives = 31/39 (79%)
Frame = +2 / +2
Query: 116 LSFHGGDMFEHIPSADALMLKWILHDWDEDKCIKIMERC 232
+ + GDMFE IPSA+A+ LKWI+HDW + +C+KI++ C
Sbjct: 203 VKYIAGDMFESIPSANAVFLKWIMHDWGDAECVKILKNC 319
Score = 51.9 bits (107), Expect(3) = 1e-022
Identities = 21/41 (51%), Positives = 27/41 (65%)
Frame = +2 / +2
Query: 368 FVNGAEREEHEWRRIFLAAGFRDYKITHTRGIPSIIEVFP* 490
+ GAER+E EW++I AGF YKI G SI+EV+P*
Sbjct: 449 YTKGAERDELEWKKIIFEAGFSHYKIIPVLGTRSIMEVYP* 571
Score = 30.4 bits (60), Expect(3) = 1e-022
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +2 / +2
Query: 59 CTVMDLPHVVAEAPAGT 109
C+V+DL HV+A AP T
Sbjct: 149 CSVLDLSHVIASAPTNT 199
>gb|CN145288.1|CN145288 WOUND1_28_A10.b2_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_28_A10_A002 3', mRNA sequence
Length = 623
Score = 63.8 bits (133), Expect(2) = 4e-022
Identities = 19/39 (48%), Positives = 30/39 (76%)
Frame = +2 / +3
Query: 116 LSFHGGDMFEHIPSADALMLKWILHDWDEDKCIKIMERC 232
+ + GDMFE +PSA+ + LKW+LHDW + +C+KI++ C
Sbjct: 18 VKYIAGDMFESVPSANVVFLKWVLHDWGDAECVKILKNC 134
Score = 62.0 bits (129), Expect(2) = 4e-022
Identities = 27/52 (51%), Positives = 34/52 (65%)
Frame = +2 / +3
Query: 335 ETYVLDLHILSFVNGAEREEHEWRRIFLAAGFRDYKITHTRGIPSIIEVFP* 490
ET VL + + GAER+E EW++I AGFR YKI G+ SIIEV+P*
Sbjct: 219 ETQVLFDLFIMTIKGAERDEKEWKKIIFEAGFRSYKIMPVLGVRSIIEVYP* 374
>gb|CX608050.1|CX608050 ANR1_32_G10.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_32_G10_A002 3', mRNA sequence
Length = 617
Score = 63.4 bits (132), Expect(2) = 1e-021
Identities = 25/52 (48%), Positives = 36/52 (69%)
Frame = +2 / +3
Query: 335 ETYVLDLHILSFVNGAEREEHEWRRIFLAAGFRDYKITHTRGIPSIIEVFP* 490
ET +L ++ +NG ER+E EW++I AGF+DYKI G+ SIIE++P*
Sbjct: 240 ETQILKALMMMNINGLERDEQEWKKISFKAGFKDYKIIPLLGVRSIIELYP* 395
Score = 60.6 bits (126), Expect(2) = 1e-021
Identities = 19/34 (55%), Positives = 29/34 (85%)
Frame = +2 / +3
Query: 131 GDMFEHIPSADALMLKWILHDWDEDKCIKIMERC 232
GDMF+ IP A+A+ LK +LHDW++D+C+KI++ C
Sbjct: 39 GDMFQSIPPANAVFLKLVLHDWNDDECVKILKNC 140
>gb|CF429902.1|CF429902 PH1_25_D10.b1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_25_D10_A002 3', mRNA sequence
Length = 545
Score = 63.4 bits (132), Expect(2) = 1e-021
Identities = 25/52 (48%), Positives = 36/52 (69%)
Frame = +2 / +2
Query: 335 ETYVLDLHILSFVNGAEREEHEWRRIFLAAGFRDYKITHTRGIPSIIEVFP* 490
ET +L ++ +NG ER+E EW++I AGF+DYKI G+ SIIE++P*
Sbjct: 242 ETQILKALMMMNINGLERDEQEWKKISFKAGFKDYKIIPLLGVRSIIELYP* 397
Score = 60.6 bits (126), Expect(2) = 1e-021
Identities = 19/34 (55%), Positives = 29/34 (85%)
Frame = +2 / +2
Query: 131 GDMFEHIPSADALMLKWILHDWDEDKCIKIMERC 232
GDMF+ IP A+A+ LK +LHDW++D+C+KI++ C
Sbjct: 41 GDMFQSIPPANAVFLKLVLHDWNDDECVKILKNC 142
>gb|CN138524.1|CN138524 OX1_64_G03.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_64_G03_A002 3', mRNA sequence
Length = 759
Score = 54.7 bits (113), Expect(3) = 5e-021
Identities = 18/34 (52%), Positives = 26/34 (76%)
Frame = +2 / +2
Query: 131 GDMFEHIPSADALMLKWILHDWDEDKCIKIMERC 232
GD+F IP A A+MLK +LH W ++ C+KI+E+C
Sbjct: 95 GDLFHTIPPAQAVMLKLVLHFWSDEDCVKILEQC 196
Score = 54.2 bits (112), Expect(3) = 5e-021
Identities = 21/49 (42%), Positives = 32/49 (65%)
Frame = +2 / +2
Query: 344 VLDLHILSFVNGAEREEHEWRRIFLAAGFRDYKITHTRGIPSIIEVFP* 490
++D+ ++ G +R E++WR+IF AGF DYKI G +IEV+P*
Sbjct: 296 LMDMLMMVNTRGRQRTENDWRQIFTKAGFSDYKIVKKIGARGVIEVYP* 442
Score = 30.9 bits (61), Expect(3) = 5e-021
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +2 / +2
Query: 56 RCTVMDLPHVVAEAPAGTAGLSFHG 130
+CTV++LP V+ APA A S G
Sbjct: 23 KCTVLNLPRVIETAPADDAASSVTG 97
>gb|BG463547.1|BG463547 EM1_49_H04.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 540
Score = 63.8 bits (133), Expect(2) = 5e-021
Identities = 30/52 (57%), Positives = 35/52 (67%)
Frame = -2 / -1
Query: 297 DPSTVSIIITFPPASLPPIASLQRSIILMHLSSSQSCRIHLSMSASADGMCS 142
DP+T S+II FPPASL IA LQ IL+H S QSC+IHL + A GM S
Sbjct: 156 DPTTTSMIIIFPPASLEGIACLQFFNILIHSSLLQSCKIHLRRTTFAGGMLS 1
Score = 62.5 bits (130), Expect(2) = 5e-021
Identities = 27/52 (51%), Positives = 36/52 (69%)
Frame = +2 / +2
Query: 335 ETYVLDLHILSFVNGAEREEHEWRRIFLAAGFRDYKITHTRGIPSIIEVFP* 490
ET V+ L + G ER+E EW++IFL AGF+DYKI G+ SIIE++P*
Sbjct: 182 ETQVIYDLHLMKIGGVERDEQEWKKIFLEAGFKDYKIMPILGLRSIIELYP* 337
Score = 59.7 bits (124), Expect(2) = 5e-021
Identities = 23/62 (37%), Positives = 32/62 (51%)
Frame = +2 / +2
Query: 143 EHIPSADALMLKWILHDWDEDKCIKIMERCXXXXXXXXXXXXXXXXDTVLGSRAXXXXXX 322
E IP A+ ++LKWILHDW D+CIKI++ C D V+GS +
Sbjct: 2 ESIPPANVVLLKWILHDWSNDECIKILKNCKQAIPSRDAGGKIIIIDVVVGSDSSDTKLL 181
Query: 323 KT 328
+T
Sbjct: 182 ET 187
Score = 58.3 bits (121), Expect(2) = 5e-021
Identities = 23/38 (60%), Positives = 29/38 (76%)
Frame = -2 / -1
Query: 489 HGKTSMMDGMPRVCVIL*SRNPAARKILLHSCSSRSAP 376
HG +SM+D P++ +IL*S NPA+R I HSCSSRS P
Sbjct: 336 HGYSSMIDRRPKIGIIL*SLNPASRNIFFHSCSSRSTP 223
>gb|CF771144.1|CF771144 DSBF1_14_E10.g1_A010 Drought-stressed before flowering Sorghum
bicolor cDNA clone DSBF1_14_E10_A010 3', mRNA sequence
Length = 570
Score = 61.6 bits (128), Expect(2) = 7e-021
Identities = 27/53 (50%), Positives = 33/53 (62%)
Frame = +2 / +1
Query: 332 RETYVLDLHILSFVNGAEREEHEWRRIFLAAGFRDYKITHTRGIPSIIEVFP* 490
+ET L + VNG ER+E EW++IF AGF DYKI G SII V+P*
Sbjct: 187 KETQALFDLYIMLVNGIERDEQEWKKIFFEAGFSDYKILPVLGARSIISVYP* 345
Score = 60.2 bits (125), Expect(2) = 7e-021
Identities = 17/33 (51%), Positives = 26/33 (78%)
Frame = +2 / +1
Query: 134 DMFEHIPSADALMLKWILHDWDEDKCIKIMERC 232
DMFE +P A+A+ KW+LHDW ++C+KI++ C
Sbjct: 1 DMFESVPPANAMFFKWVLHDWSHEECVKILKNC 99
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 771,307,499
Number of Sequences: 832831
Number of extensions: 11125491
Number of successful extensions: 99919
Number of sequences better than 1.0e-020: 45
length of database: 163,786,556
effective HSP length: 54
effective length of database: 118,813,682
effective search space used: 22693413262
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)