TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 1738931.2.11
(609 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CX607512.1|CX607512 ANR1_29_D08.b1_A002 Anaerobic roots ... 293 3e-080
gb|CX609140.1|CX609140 ANR1_10_H07.g1_A002 Anaerobic roots ... 283 8e-079
gb|CF757145.1|CF757145 DSAF1_14_C10.g1_A011 Drought-stresse... 290 1e-077
gb|AW681059.1|AW681059 WS1_8_F11.b1_A002 Water-stressed 1 (... 277 1e-075
gb|CF758711.1|CF758711 DSAF1_35_G03.g1_A011 Drought-stresse... 281 9e-075
gb|CF486710.1|CF486710 POL1_39_G01.b1_A002 Pollen Sorghum b... 274 1e-072
gb|AW677661.1|AW677661 WS1_10_H03.b1_A002 Water-stressed 1 ... 222 4e-057
gb|CX609218.1|CX609218 ANR1_11_H04.b1_A002 Anaerobic roots ... 222 4e-057
gb|CX612032.1|CX612032 ANR1_28_D05.b1_A002 Anaerobic roots ... 222 4e-057
gb|AW563235.1|AW563235 LG1_204_D05.g1_A002 Light Grown 1 (L... 221 8e-057
gb|CX609304.1|CX609304 ANR1_11_H04.g1_A002 Anaerobic roots ... 219 3e-056
gb|AW677706.1|AW677706 WS1_10_H03.g1_A002 Water-stressed 1 ... 216 3e-055
gb|CX612122.1|CX612122 ANR1_28_D05.g1_A002 Anaerobic roots ... 214 9e-055
gb|AW286714.2|AW286714 LG1_204_D05.b1_A002 Light Grown 1 (L... 193 3e-048
gb|CL187157.1|CL187157 104_402_10900693_114_32432_055 Sorgh... 167 1e-040
gb|CW363851.1|CW363851 fsbb001f035k08f0 Sorghum methylation... 167 1e-040
gb|CW363852.1|CW363852 fsbb001f035k08k0 Sorghum methylation... 167 1e-040
gb|BE918174.1|BE918174 OV1_2_G12.b1_A002 Ovary 1 (OV1) Sorg... 137 2e-036
gb|BE918375.1|BE918375 OV1_2_G12.g1_A002 Ovary 1 (OV1) Sorg... 106 4e-027
gb|CF760723.1|CF760723 DSAF1_65_D03.b1_A011 Drought-stresse... 122 7e-027
>gb|CX607512.1|CX607512 ANR1_29_D08.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_29_D08_A002 3', mRNA sequence
Length = 581
Score = 293 bits (635), Expect(2) = 3e-080
Identities = 128/166 (77%), Positives = 136/166 (81%)
Frame = +2 / +3
Query: 5 PHHTTQRNPPTRTRSRGDMSQGKGGASRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKE 184
P +TTQ NPPTRTRSRG+M+ KGGA+RKEEVVTREYTINLHKRLHGCTFKKKAPNA+KE
Sbjct: 12 PRNTTQSNPPTRTRSRGEMADRKGGAARKEEVVTREYTINLHKRLHGCTFKKKAPNAVKE 191
Query: 185 IRKFAQKAMGTTDVRIDVKLNKHIWSSGIXXXXXXXXXXXXXXXNDEEDAKEELYSLVTV 364
IRKFAQKAMGTTDVRIDVKLNKHIWSSGI NDEEDAKEELYSLVTV
Sbjct: 192 IRKFAQKAMGTTDVRIDVKLNKHIWSSGIRSVPRRVRVRIARKRNDEEDAKEELYSLVTV 371
Query: 365 AEIPAEGLKGLGTKVVDETD*AVAFSTSLESS*FVFATAKPFVSKE 502
AEIPAEGLKGLGTKV+DE D*A+ SLES *FVFATA K+
Sbjct: 372 AEIPAEGLKGLGTKVIDEAD*AITS*ASLESF*FVFATANLLYPKK 509
Score = 233 bits (504), Expect = 1e-060
Identities = 104/165 (63%), Positives = 113/165 (68%)
Frame = -3 / -1
Query: 499 LGYKRFCCCKYKLGTL*RCGERDSLIGFVNDLGPQPFQALGRDLRDGDKGVEFLLGILLI 320
L ++ CCCKYKL TL*RC DSLI F+NDLG QPFQAL RDL DKGVEFLLGILL+
Sbjct: 506 LWIQKVCCCKYKLKTL*RCLRCDSLISFINDLGSQPFQALSRDLSHRDKGVEFLLGILLV 327
Query: 319 VPLAGDPHTNPPRHXXXXXXXDVLVELHIDPDVRGAHGLLCKLPDLLDGVGXXXXXXXXX 140
VPLAG+PHTNPP H DVLVELH++PDV GAH LLCKLPDLLDG+G
Sbjct: 326 VPLAGNPHTNPPWHAPDSTAPDVLVELHVNPDVGGAHSLLCKLPDLLDGIGCLLLECAAV 147
Query: 139 XXXXXVDGVLPGDHXXXXXXXXXXXRHISSAPGAGGRIPLGSVVR 5
VDGVLPGDH RH+SSAPGAGG I LG V R
Sbjct: 146 EALVEVDGVLPGDHLLLPCRSSLPVRHLSSAPGAGGGIRLGGVPR 12
Score = 220 bits (474), Expect(2) = 7e-062
Identities = 94/129 (72%), Positives = 101/129 (78%)
Frame = +1 / +2
Query: 139 PRLHIQEEGTQRHQGDQEVCTEGHGHHGRQDRCEAQQAHLEQRDQERAAEGSCEDRPQEE 318
PRLHIQEEGTQ QGDQEVCTEG+GHH RQD EAQQAHLEQ +QERA EGSCED PQEE
Sbjct: 146 PRLHIQEEGTQCRQGDQEVCTEGYGHHRRQD*REAQQAHLEQWNQERATEGSCEDCPQEE 325
Query: 319 R*GGCQGGTLLPCHRRGDPCRGLERAGDQGR*RNRLSCRVLHIFREFLVCICNSKTFCIQ 498
R GGCQGGTLLPCH DPC GLERAG+QG * + LS +L IFREFLVCICNSK F +
Sbjct: 326 RRGGCQGGTLLPCHGG*DPC*GLERAGNQGH**S*LSYHILSIFREFLVCICNSKPFVSK 505
Query: 499 GSFCIHKVV 525
C V+
Sbjct: 506 EVLCSGTVI 532
Score = 151 bits (325), Expect(7) = 1e-068
Identities = 65/71 (91%), Positives = 66/71 (92%)
Frame = -1 / -2
Query: 258 QMCLLSFTSILTSVVPMAFCANFLISLMALGAFFLNVQPWRRLWRLMVYSLVTTSSFLDA 79
QMCLLSFTSILTSVVP+AFCANFLISL ALGAFFLNVQPWRRLWRLMVYSLVTTSSFL A
Sbjct: 265 QMCLLSFTSILTSVVPIAFCANFLISLTALGAFFLNVQPWRRLWRLMVYSLVTTSSFLAA 86
Query: 78 PPFPCDISPLL 46
PPF ISPLL
Sbjct: 85 PPFLSAISPLL 53
Score = 45.5 bits (93), Expect(7) = 1e-068
Identities = 21/33 (63%), Positives = 24/33 (72%)
Frame = -2 / -3
Query: 488 KVLLLQIQTRNSLKMWRTRQLNRFRQRPWSPAL 390
K LLLQIQT+NSLKM + LN+ Q PW PAL
Sbjct: 495 KGLLLQIQTKNSLKMLKM**LNQLHQ*PWFPAL 397
Score = 44.1 bits (90), Expect(7) = 1e-068
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = -2 / -3
Query: 335 WHPPHRSSCGRSSHEP 288
WHPP RSSCG+SSHEP
Sbjct: 342 WHPPRRSSCGQSSHEP 295
Score = 38.6 bits (78), Expect(7) = 1e-068
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -2 / -3
Query: 56 LLCSGCGWADSAG*CGA 6
LLCSGCGW DS G C A
Sbjct: 63 LLCSGCGWGDSTGWCSA 13
Score = 38.6 bits (78), Expect(2) = 7e-062
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = +1 / +2
Query: 7 APHYPAESAHPHPEQRR 57
A H+P ES HPHPEQRR
Sbjct: 14 AEHHPVESPHPHPEQRR 64
Score = 34.1 bits (68), Expect(7) = 1e-068
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = -1 / -2
Query: 390 FKPSAGISATVTRE 349
FKPSAGISATVTRE
Sbjct: 397 FKPSAGISATVTRE 356
Score = 31.3 bits (62), Expect(7) = 1e-068
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = -1 / -3
Query: 555 N*PCNSVAEIDNFVNTKT 502
+*PCNS+ EIDNFV + T
Sbjct: 579 D*PCNSIEEIDNFVMSIT 526
Score = 26.3 bits (51), Expect(2) = 3e-080
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = +3 / +3
Query: 513 SQSCLFLQQNCMAS 554
SQSCLF Q N MAS
Sbjct: 537 SQSCLFPQSNYMAS 578
Score = 22.1 bits (42), Expect(7) = 1e-068
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = -3 / -2
Query: 508 KNFLGYKRF 482
+NF GYKRF
Sbjct: 514 QNFFGYKRF 488
>gb|CX609140.1|CX609140 ANR1_10_H07.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_10_H07_A002 5', mRNA sequence
Length = 710
Score = 283 bits (613), Expect(3) = 8e-079
Identities = 124/159 (77%), Positives = 131/159 (82%)
Frame = +2 / +3
Query: 26 NPPTRTRSRGDMSQGKGGASRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQK 205
NPPTRTRSRG+M+ KGGA+RKEEVVTREYTINLHKRLHGCTFKKKAPNA+KEIRKFAQK
Sbjct: 3 NPPTRTRSRGEMADRKGGAARKEEVVTREYTINLHKRLHGCTFKKKAPNAVKEIRKFAQK 182
Query: 206 AMGTTDVRIDVKLNKHIWSSGIXXXXXXXXXXXXXXXNDEEDAKEELYSLVTVAEIPAEG 385
AMGTTDVRIDVKLNKHIWSSGI NDEEDAKEELYSLVTVAEIPAEG
Sbjct: 183 AMGTTDVRIDVKLNKHIWSSGIRSVPRRVRVRIARKRNDEEDAKEELYSLVTVAEIPAEG 362
Query: 386 LKGLGTKVVDETD*AVAFSTSLESS*FVFATAKPFVSKE 502
LKGLGTKV+DE D*A+ SLES *FVFATA K+
Sbjct: 363 LKGLGTKVIDEAD*AITS*ASLESF*FVFATANLLYPKK 479
Score = 226 bits (489), Expect(2) = 6e-059
Identities = 100/158 (63%), Positives = 109/158 (68%)
Frame = -3 / -1
Query: 499 LGYKRFCCCKYKLGTL*RCGERDSLIGFVNDLGPQPFQALGRDLRDGDKGVEFLLGILLI 320
L ++ CCCKYKL TL*RC DSLI F+NDLG QPFQAL RDL DKGVEFLLGILL+
Sbjct: 476 LWIQKVCCCKYKLKTL*RCLRCDSLISFINDLGSQPFQALSRDLSHRDKGVEFLLGILLV 297
Query: 319 VPLAGDPHTNPPRHXXXXXXXDVLVELHIDPDVRGAHGLLCKLPDLLDGVGXXXXXXXXX 140
VPLAG+PHTNPP H DVLVELH++PDV GAH LLCKLPDLLDG+G
Sbjct: 296 VPLAGNPHTNPPWHAPDSTAPDVLVELHVNPDVGGAHSLLCKLPDLLDGIGCLLLECAAV 117
Query: 139 XXXXXVDGVLPGDHXXXXXXXXXXXRHISSAPGAGGRI 26
VDGVLPGDH RH+SSAPGAGG I
Sbjct: 116 EALVEVDGVLPGDHLLLPCRSSLPVRHLSSAPGAGGGI 3
Score = 220 bits (474), Expect(2) = 4e-059
Identities = 94/129 (72%), Positives = 101/129 (78%)
Frame = +1 / +2
Query: 139 PRLHIQEEGTQRHQGDQEVCTEGHGHHGRQDRCEAQQAHLEQRDQERAAEGSCEDRPQEE 318
PRLHIQEEGTQ QGDQEVCTEG+GHH RQD EAQQAHLEQ +QERA EGSCED PQEE
Sbjct: 116 PRLHIQEEGTQCRQGDQEVCTEGYGHHRRQD*REAQQAHLEQWNQERATEGSCEDCPQEE 295
Query: 319 R*GGCQGGTLLPCHRRGDPCRGLERAGDQGR*RNRLSCRVLHIFREFLVCICNSKTFCIQ 498
R GGCQGGTLLPCH DPC GLERAG+QG * + LS +L IFREFLVCICNSK F +
Sbjct: 296 RRGGCQGGTLLPCHGG*DPC*GLERAGNQGH**S*LSYHILSIFREFLVCICNSKPFVSK 475
Query: 499 GSFCIHKVV 525
C V+
Sbjct: 476 EVLCSGTVI 502
Score = 151 bits (325), Expect(7) = 3e-067
Identities = 65/71 (91%), Positives = 66/71 (92%)
Frame = -1 / -2
Query: 258 QMCLLSFTSILTSVVPMAFCANFLISLMALGAFFLNVQPWRRLWRLMVYSLVTTSSFLDA 79
QMCLLSFTSILTSVVP+AFCANFLISL ALGAFFLNVQPWRRLWRLMVYSLVTTSSFL A
Sbjct: 235 QMCLLSFTSILTSVVPIAFCANFLISLTALGAFFLNVQPWRRLWRLMVYSLVTTSSFLAA 56
Query: 78 PPFPCDISPLL 46
PPF ISPLL
Sbjct: 55 PPFLSAISPLL 23
Score = 45.5 bits (93), Expect(7) = 3e-067
Identities = 21/33 (63%), Positives = 24/33 (72%)
Frame = -2 / -3
Query: 488 KVLLLQIQTRNSLKMWRTRQLNRFRQRPWSPAL 390
K LLLQIQT+NSLKM + LN+ Q PW PAL
Sbjct: 465 KGLLLQIQTKNSLKMLKM**LNQLHQ*PWFPAL 367
Score = 44.1 bits (90), Expect(7) = 3e-067
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = -2 / -3
Query: 335 WHPPHRSSCGRSSHEP 288
WHPP RSSCG+SSHEP
Sbjct: 312 WHPPRRSSCGQSSHEP 265
Score = 35.0 bits (70), Expect(7) = 3e-067
Identities = 14/23 (60%), Positives = 18/23 (78%)
Frame = -1 / -3
Query: 570 QR*KEN*PCNSVAEIDNFVNTKT 502
Q ++N*PCNS+ EIDNFV + T
Sbjct: 564 QHKQKN*PCNSIEEIDNFVMSIT 496
Score = 34.1 bits (68), Expect(7) = 3e-067
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = -1 / -2
Query: 390 FKPSAGISATVTRE 349
FKPSAGISATVTRE
Sbjct: 367 FKPSAGISATVTRE 326
Score = 31.8 bits (63), Expect(7) = 3e-067
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = -2 / -3
Query: 56 LLCSGCGWADS 24
LLCSGCGW DS
Sbjct: 33 LLCSGCGWGDS 1
Score = 29.5 bits (58), Expect(2) = 4e-059
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = +1 / +2
Query: 25 ESAHPHPEQRR 57
ES HPHPEQRR
Sbjct: 2 ESPHPHPEQRR 34
Score = 27.2 bits (53), Expect(3) = 8e-079
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +3 / +3
Query: 513 SQSCLFLQQNCMASFLFISAT 575
SQSCLF Q N MAS +A+
Sbjct: 507 SQSCLFPQSNYMASSFVCAAS 569
Score = 23.5 bits (45), Expect(3) = 8e-079
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +1 / +1
Query: 574 HPFLLYRPL 600
HPFL YRPL
Sbjct: 565 HPFLHYRPL 591
Score = 22.1 bits (42), Expect(7) = 3e-067
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = -3 / -2
Query: 508 KNFLGYKRF 482
+NF GYKRF
Sbjct: 484 QNFFGYKRF 458
Score = 22.1 bits (42), Expect(2) = 6e-059
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -3 / -2
Query: 571 AEMKRKLAMQFCCRNRQLCE 512
A ++LAM F NRQLC+
Sbjct: 565 AAQTKELAM*FD*GNRQLCD 506
>gb|CF757145.1|CF757145 DSAF1_14_C10.g1_A011 Drought-stressed after flowering Sorghum
bicolor cDNA clone DSAF1_14_C10_A011 3', mRNA sequence
Length = 544
Score = 290 bits (628), Expect = 1e-077
Identities = 127/164 (77%), Positives = 135/164 (82%)
Frame = +2 / +2
Query: 11 HTTQRNPPTRTRSRGDMSQGKGGASRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIR 190
+TTQ NPPTRTRSRG+M+ KGGA+RKEEVVTREYTINLHKRLHGCTFKKKAPNA+KEIR
Sbjct: 5 NTTQSNPPTRTRSRGEMADRKGGAARKEEVVTREYTINLHKRLHGCTFKKKAPNAVKEIR 184
Query: 191 KFAQKAMGTTDVRIDVKLNKHIWSSGIXXXXXXXXXXXXXXXNDEEDAKEELYSLVTVAE 370
KFAQKAMGTTDVRIDVKLNKHIWSSGI NDEEDAKEELYSLVTVAE
Sbjct: 185 KFAQKAMGTTDVRIDVKLNKHIWSSGIRSVPRRVRVRIARKRNDEEDAKEELYSLVTVAE 364
Query: 371 IPAEGLKGLGTKVVDETD*AVAFSTSLESS*FVFATAKPFVSKE 502
IPAEGLKGLGTKV+DE D*A+ SLES *FVFATA K+
Sbjct: 365 IPAEGLKGLGTKVIDEAD*AITS*ASLESF*FVFATANLLYPKK 496
Score = 232 bits (501), Expect = 4e-060
Identities = 103/163 (63%), Positives = 112/163 (68%)
Frame = -3 / -1
Query: 499 LGYKRFCCCKYKLGTL*RCGERDSLIGFVNDLGPQPFQALGRDLRDGDKGVEFLLGILLI 320
L ++ CCCKYKL TL*RC DSLI F+NDLG QPFQAL RDL DKGVEFLLGILL+
Sbjct: 493 LWIQKVCCCKYKLKTL*RCLRCDSLISFINDLGSQPFQALSRDLSHRDKGVEFLLGILLV 314
Query: 319 VPLAGDPHTNPPRHXXXXXXXDVLVELHIDPDVRGAHGLLCKLPDLLDGVGXXXXXXXXX 140
VPLAG+PHTNPP H DVLVELH++PDV GAH LLCKLPDLLDG+G
Sbjct: 313 VPLAGNPHTNPPWHAPDSTAPDVLVELHVNPDVGGAHSLLCKLPDLLDGIGCLLLECAAV 134
Query: 139 XXXXXVDGVLPGDHXXXXXXXXXXXRHISSAPGAGGRIPLGSV 11
VDGVLPGDH RH+SSAPGAGG I LG V
Sbjct: 133 EALVEVDGVLPGDHLLLPCRSSLPVRHLSSAPGAGGGIRLGGV 5
Score = 220 bits (474), Expect(2) = 7e-062
Identities = 94/129 (72%), Positives = 101/129 (78%)
Frame = +1 / +1
Query: 139 PRLHIQEEGTQRHQGDQEVCTEGHGHHGRQDRCEAQQAHLEQRDQERAAEGSCEDRPQEE 318
PRLHIQEEGTQ QGDQEVCTEG+GHH RQD EAQQAHLEQ +QERA EGSCED PQEE
Sbjct: 133 PRLHIQEEGTQCRQGDQEVCTEGYGHHRRQD*REAQQAHLEQWNQERATEGSCEDCPQEE 312
Query: 319 R*GGCQGGTLLPCHRRGDPCRGLERAGDQGR*RNRLSCRVLHIFREFLVCICNSKTFCIQ 498
R GGCQGGTLLPCH DPC GLERAG+QG * + LS +L IFREFLVCICNSK F +
Sbjct: 313 RRGGCQGGTLLPCHGG*DPC*GLERAGNQGH**S*LSYHILSIFREFLVCICNSKPFVSK 492
Query: 499 GSFCIHKVV 525
C V+
Sbjct: 493 EVLCSGTVI 519
Score = 151 bits (325), Expect(6) = 1e-063
Identities = 65/71 (91%), Positives = 66/71 (92%)
Frame = -1 / -2
Query: 258 QMCLLSFTSILTSVVPMAFCANFLISLMALGAFFLNVQPWRRLWRLMVYSLVTTSSFLDA 79
QMCLLSFTSILTSVVP+AFCANFLISL ALGAFFLNVQPWRRLWRLMVYSLVTTSSFL A
Sbjct: 252 QMCLLSFTSILTSVVPIAFCANFLISLTALGAFFLNVQPWRRLWRLMVYSLVTTSSFLAA 73
Query: 78 PPFPCDISPLL 46
PPF ISPLL
Sbjct: 72 PPFLSAISPLL 40
Score = 45.5 bits (93), Expect(6) = 1e-063
Identities = 21/33 (63%), Positives = 24/33 (72%)
Frame = -2 / -3
Query: 488 KVLLLQIQTRNSLKMWRTRQLNRFRQRPWSPAL 390
K LLLQIQT+NSLKM + LN+ Q PW PAL
Sbjct: 482 KGLLLQIQTKNSLKMLKM**LNQLHQ*PWFPAL 384
Score = 44.1 bits (90), Expect(6) = 1e-063
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = -2 / -3
Query: 335 WHPPHRSSCGRSSHEP 288
WHPP RSSCG+SSHEP
Sbjct: 329 WHPPRRSSCGQSSHEP 282
Score = 38.6 bits (78), Expect(2) = 7e-062
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = +1 / +1
Query: 7 APHYPAESAHPHPEQRR 57
A H+P ES HPHPEQRR
Sbjct: 1 AEHHPVESPHPHPEQRR 51
Score = 36.8 bits (74), Expect(6) = 1e-063
Identities = 12/15 (80%), Positives = 12/15 (80%)
Frame = -2 / -3
Query: 56 LLCSGCGWADSAG*C 12
LLCSGCGW DS G C
Sbjct: 50 LLCSGCGWGDSTGWC 6
Score = 34.1 bits (68), Expect(6) = 1e-063
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = -1 / -2
Query: 390 FKPSAGISATVTRE 349
FKPSAGISATVTRE
Sbjct: 384 FKPSAGISATVTRE 343
Score = 22.1 bits (42), Expect(6) = 1e-063
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = -3 / -2
Query: 508 KNFLGYKRF 482
+NF GYKRF
Sbjct: 501 QNFFGYKRF 475
>gb|AW681059.1|AW681059 WS1_8_F11.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA, mRNA
sequence
Length = 586
Score = 277 bits (600), Expect(2) = 1e-075
Identities = 122/157 (77%), Positives = 129/157 (82%)
Frame = +2 / +3
Query: 32 PTRTRSRGDMSQGKGGASRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAM 211
PTRTRSRG+M+ KGGA+RKEEVVTREYTINLHKRLHGCTFKKKAPNA+KEIRKFAQKAM
Sbjct: 9 PTRTRSRGEMADRKGGAARKEEVVTREYTINLHKRLHGCTFKKKAPNAVKEIRKFAQKAM 188
Query: 212 GTTDVRIDVKLNKHIWSSGIXXXXXXXXXXXXXXXNDEEDAKEELYSLVTVAEIPAEGLK 391
GTTDVRIDVKLNKHIWSSGI NDEEDAKEELYSLVTVAEIPAEGLK
Sbjct: 189 GTTDVRIDVKLNKHIWSSGIRSVPRRVRVRIARKRNDEEDAKEELYSLVTVAEIPAEGLK 368
Query: 392 GLGTKVVDETD*AVAFSTSLESS*FVFATAKPFVSKE 502
GLGTKV+DE D*A+ SLES *FVFATA K+
Sbjct: 369 GLGTKVIDEAD*AITS*ASLESF*FVFATANLLYPKK 479
Score = 226 bits (487), Expect(2) = 1e-058
Identities = 99/156 (63%), Positives = 108/156 (69%)
Frame = -3 / -3
Query: 499 LGYKRFCCCKYKLGTL*RCGERDSLIGFVNDLGPQPFQALGRDLRDGDKGVEFLLGILLI 320
L ++ CCCKYKL TL*RC DSLI F+NDLG QPFQAL RDL DKGVEFLLGILL+
Sbjct: 476 LWIQKVCCCKYKLKTL*RCLRCDSLISFINDLGSQPFQALSRDLSHRDKGVEFLLGILLV 297
Query: 319 VPLAGDPHTNPPRHXXXXXXXDVLVELHIDPDVRGAHGLLCKLPDLLDGVGXXXXXXXXX 140
VPLAG+PHTNPP H DVLVELH++PDV GAH LLCKLPDLLDG+G
Sbjct: 296 VPLAGNPHTNPPWHAPDSTAPDVLVELHVNPDVGGAHSLLCKLPDLLDGIGCLLLECAAV 117
Query: 139 XXXXXVDGVLPGDHXXXXXXXXXXXRHISSAPGAGG 32
VDGVLPGDH RH+SSAPGAGG
Sbjct: 116 EALVEVDGVLPGDHLLLPCRSSLPVRHLSSAPGAGG 9
Score = 220 bits (474), Expect(2) = 1e-058
Identities = 94/129 (72%), Positives = 101/129 (78%)
Frame = +1 / +2
Query: 139 PRLHIQEEGTQRHQGDQEVCTEGHGHHGRQDRCEAQQAHLEQRDQERAAEGSCEDRPQEE 318
PRLHIQEEGTQ QGDQEVCTEG+GHH RQD EAQQAHLEQ +QERA EGSCED PQEE
Sbjct: 116 PRLHIQEEGTQCRQGDQEVCTEGYGHHRRQD*REAQQAHLEQWNQERATEGSCEDCPQEE 295
Query: 319 R*GGCQGGTLLPCHRRGDPCRGLERAGDQGR*RNRLSCRVLHIFREFLVCICNSKTFCIQ 498
R GGCQGGTLLPCH DPC GLERAG+QG * + LS +L IFREFLVCICNSK F +
Sbjct: 296 RRGGCQGGTLLPCHGG*DPC*GLERAGNQGH**S*LSYHILSIFREFLVCICNSKPFVSK 475
Query: 499 GSFCIHKVV 525
C V+
Sbjct: 476 EVLCSGTVI 502
Score = 151 bits (325), Expect(7) = 5e-067
Identities = 65/71 (91%), Positives = 66/71 (92%)
Frame = -1 / -1
Query: 258 QMCLLSFTSILTSVVPMAFCANFLISLMALGAFFLNVQPWRRLWRLMVYSLVTTSSFLDA 79
QMCLLSFTSILTSVVP+AFCANFLISL ALGAFFLNVQPWRRLWRLMVYSLVTTSSFL A
Sbjct: 235 QMCLLSFTSILTSVVPIAFCANFLISLTALGAFFLNVQPWRRLWRLMVYSLVTTSSFLAA 56
Query: 78 PPFPCDISPLL 46
PPF ISPLL
Sbjct: 55 PPFLSAISPLL 23
Score = 45.5 bits (93), Expect(7) = 5e-067
Identities = 21/33 (63%), Positives = 24/33 (72%)
Frame = -2 / -2
Query: 488 KVLLLQIQTRNSLKMWRTRQLNRFRQRPWSPAL 390
K LLLQIQT+NSLKM + LN+ Q PW PAL
Sbjct: 465 KGLLLQIQTKNSLKMLKM**LNQLHQ*PWFPAL 367
Score = 44.1 bits (90), Expect(7) = 5e-067
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = -2 / -2
Query: 335 WHPPHRSSCGRSSHEP 288
WHPP RSSCG+SSHEP
Sbjct: 312 WHPPRRSSCGQSSHEP 265
Score = 35.0 bits (70), Expect(7) = 5e-067
Identities = 14/23 (60%), Positives = 18/23 (78%)
Frame = -1 / -2
Query: 570 QR*KEN*PCNSVAEIDNFVNTKT 502
Q ++N*PCNS+ EIDNFV + T
Sbjct: 564 QHKQKN*PCNSIEEIDNFVMSIT 496
Score = 34.1 bits (68), Expect(7) = 5e-067
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = -1 / -1
Query: 390 FKPSAGISATVTRE 349
FKPSAGISATVTRE
Sbjct: 367 FKPSAGISATVTRE 326
Score = 29.0 bits (57), Expect(7) = 5e-067
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = -2 / -2
Query: 56 LLCSGCGWA 30
LLCSGCGWA
Sbjct: 33 LLCSGCGWA 7
Score = 27.6 bits (54), Expect(2) = 1e-058
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +1 / +2
Query: 31 AHPHPEQRR 57
AHPHPEQRR
Sbjct: 8 AHPHPEQRR 34
Score = 26.7 bits (52), Expect(2) = 1e-075
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = +3 / +3
Query: 513 SQSCLFLQQNCMASFLFISA 572
SQSCLF Q N MAS +A
Sbjct: 507 SQSCLFPQSNYMASSFVCAA 566
Score = 22.1 bits (42), Expect(7) = 5e-067
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = -3 / -1
Query: 508 KNFLGYKRF 482
+NF GYKRF
Sbjct: 484 QNFFGYKRF 458
Score = 22.1 bits (42), Expect(2) = 1e-058
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -3 / -1
Query: 571 AEMKRKLAMQFCCRNRQLCE 512
A ++LAM F NRQLC+
Sbjct: 565 AAQTKELAM*FD*GNRQLCD 506
>gb|CF758711.1|CF758711 DSAF1_35_G03.g1_A011 Drought-stressed after flowering Sorghum
bicolor cDNA clone DSAF1_35_G03_A011 3', mRNA sequence
Length = 523
Score = 281 bits (607), Expect = 9e-075
Identities = 123/158 (77%), Positives = 130/158 (82%)
Frame = +2 / +1
Query: 29 PPTRTRSRGDMSQGKGGASRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKA 208
PPTRTRSRG+M+ KGGA+RKEEVVTREYTINLHKRLHGCTFKKKAPNA+KEIRKFAQKA
Sbjct: 1 PPTRTRSRGEMADRKGGAARKEEVVTREYTINLHKRLHGCTFKKKAPNAVKEIRKFAQKA 180
Query: 209 MGTTDVRIDVKLNKHIWSSGIXXXXXXXXXXXXXXXNDEEDAKEELYSLVTVAEIPAEGL 388
MGTTDVRIDVKLNKHIWSSGI NDEEDAKEELYSLVTVAEIPAEGL
Sbjct: 181 MGTTDVRIDVKLNKHIWSSGIRSVPRRVRVRIARKRNDEEDAKEELYSLVTVAEIPAEGL 360
Query: 389 KGLGTKVVDETD*AVAFSTSLESS*FVFATAKPFVSKE 502
KGLGTKV+DE D*A+ SLES *FVFATA K+
Sbjct: 361 KGLGTKVIDEAD*AITS*ASLESF*FVFATANLLYPKK 474
Score = 226 bits (487), Expect = 3e-058
Identities = 99/156 (63%), Positives = 108/156 (69%)
Frame = -3 / -2
Query: 499 LGYKRFCCCKYKLGTL*RCGERDSLIGFVNDLGPQPFQALGRDLRDGDKGVEFLLGILLI 320
L ++ CCCKYKL TL*RC DSLI F+NDLG QPFQAL RDL DKGVEFLLGILL+
Sbjct: 471 LWIQKVCCCKYKLKTL*RCLRCDSLISFINDLGSQPFQALSRDLSHRDKGVEFLLGILLV 292
Query: 319 VPLAGDPHTNPPRHXXXXXXXDVLVELHIDPDVRGAHGLLCKLPDLLDGVGXXXXXXXXX 140
VPLAG+PHTNPP H DVLVELH++PDV GAH LLCKLPDLLDG+G
Sbjct: 291 VPLAGNPHTNPPWHAPDSTAPDVLVELHVNPDVGGAHSLLCKLPDLLDGIGCLLLECAAV 112
Query: 139 XXXXXVDGVLPGDHXXXXXXXXXXXRHISSAPGAGG 32
VDGVLPGDH RH+SSAPGAGG
Sbjct: 111 EALVEVDGVLPGDHLLLPCRSSLPVRHLSSAPGAGG 4
Score = 220 bits (474), Expect(2) = 5e-058
Identities = 94/129 (72%), Positives = 101/129 (78%)
Frame = +1 / +3
Query: 139 PRLHIQEEGTQRHQGDQEVCTEGHGHHGRQDRCEAQQAHLEQRDQERAAEGSCEDRPQEE 318
PRLHIQEEGTQ QGDQEVCTEG+GHH RQD EAQQAHLEQ +QERA EGSCED PQEE
Sbjct: 111 PRLHIQEEGTQCRQGDQEVCTEGYGHHRRQD*REAQQAHLEQWNQERATEGSCEDCPQEE 290
Query: 319 R*GGCQGGTLLPCHRRGDPCRGLERAGDQGR*RNRLSCRVLHIFREFLVCICNSKTFCIQ 498
R GGCQGGTLLPCH DPC GLERAG+QG * + LS +L IFREFLVCICNSK F +
Sbjct: 291 RRGGCQGGTLLPCHGG*DPC*GLERAGNQGH**S*LSYHILSIFREFLVCICNSKPFVSK 470
Query: 499 GSFCIHKVV 525
C V+
Sbjct: 471 EVLCSGTVI 497
Score = 151 bits (325), Expect(6) = 6e-061
Identities = 65/71 (91%), Positives = 66/71 (92%)
Frame = -1 / -3
Query: 258 QMCLLSFTSILTSVVPMAFCANFLISLMALGAFFLNVQPWRRLWRLMVYSLVTTSSFLDA 79
QMCLLSFTSILTSVVP+AFCANFLISL ALGAFFLNVQPWRRLWRLMVYSLVTTSSFL A
Sbjct: 230 QMCLLSFTSILTSVVPIAFCANFLISLTALGAFFLNVQPWRRLWRLMVYSLVTTSSFLAA 51
Query: 78 PPFPCDISPLL 46
PPF ISPLL
Sbjct: 50 PPFLSAISPLL 18
Score = 45.5 bits (93), Expect(6) = 6e-061
Identities = 21/33 (63%), Positives = 24/33 (72%)
Frame = -2 / -1
Query: 488 KVLLLQIQTRNSLKMWRTRQLNRFRQRPWSPAL 390
K LLLQIQT+NSLKM + LN+ Q PW PAL
Sbjct: 460 KGLLLQIQTKNSLKMLKM**LNQLHQ*PWFPAL 362
Score = 44.1 bits (90), Expect(6) = 6e-061
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = -2 / -1
Query: 335 WHPPHRSSCGRSSHEP 288
WHPP RSSCG+SSHEP
Sbjct: 307 WHPPRRSSCGQSSHEP 260
Score = 34.1 bits (68), Expect(6) = 6e-061
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = -1 / -3
Query: 390 FKPSAGISATVTRE 349
FKPSAGISATVTRE
Sbjct: 362 FKPSAGISATVTRE 321
Score = 27.2 bits (53), Expect(6) = 6e-061
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -2 / -1
Query: 56 LLCSGCGW 33
LLCSGCGW
Sbjct: 28 LLCSGCGW 5
Score = 25.8 bits (50), Expect(2) = 5e-058
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +1 / +3
Query: 34 HPHPEQRR 57
HPHPEQRR
Sbjct: 6 HPHPEQRR 29
Score = 22.1 bits (42), Expect(6) = 6e-061
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = -3 / -3
Query: 508 KNFLGYKRF 482
+NF GYKRF
Sbjct: 479 QNFFGYKRF 453
>gb|CF486710.1|CF486710 POL1_39_G01.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_39_G01_A002 3', mRNA sequence
Length = 544
Score = 274 bits (592), Expect = 1e-072
Identities = 120/158 (75%), Positives = 127/158 (80%)
Frame = +2 / +1
Query: 29 PPTRTRSRGDMSQGKGGASRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKA 208
PP R RSRG+M+ KGGA+RKEEVVTREYTINLHKR HGCTFKKKAPNA+KEIRKFAQKA
Sbjct: 10 PPIRARSRGEMADRKGGAARKEEVVTREYTINLHKRFHGCTFKKKAPNAVKEIRKFAQKA 189
Query: 209 MGTTDVRIDVKLNKHIWSSGIXXXXXXXXXXXXXXXNDEEDAKEELYSLVTVAEIPAEGL 388
MGTTDVRIDVKLNKHIWSSGI NDEEDAKEELYSLVTVAEIPAEGL
Sbjct: 190 MGTTDVRIDVKLNKHIWSSGIRSVPRRVRVRIARKRNDEEDAKEELYSLVTVAEIPAEGL 369
Query: 389 KGLGTKVVDETD*AVAFSTSLESS*FVFATAKPFVSKE 502
KGLGTKV+DE D*A+ SLES *FVFATA K+
Sbjct: 370 KGLGTKVIDEAD*AITS*ASLESF*FVFATANLLYPKK 483
Score = 220 bits (474), Expect = 2e-056
Identities = 94/129 (72%), Positives = 101/129 (78%)
Frame = +1 / +3
Query: 139 PRLHIQEEGTQRHQGDQEVCTEGHGHHGRQDRCEAQQAHLEQRDQERAAEGSCEDRPQEE 318
PRLHIQEEGTQ QGDQEVCTEG+GHH RQD EAQQAHLEQ +QERA EGSCED PQEE
Sbjct: 120 PRLHIQEEGTQCRQGDQEVCTEGYGHHRRQD*REAQQAHLEQWNQERATEGSCEDCPQEE 299
Query: 319 R*GGCQGGTLLPCHRRGDPCRGLERAGDQGR*RNRLSCRVLHIFREFLVCICNSKTFCIQ 498
R GGCQGGTLLPCH DPC GLERAG+QG * + LS +L IFREFLVCICNSK F +
Sbjct: 300 RRGGCQGGTLLPCHGG*DPC*GLERAGNQGH**S*LSYHILSIFREFLVCICNSKPFVSK 479
Query: 499 GSFCIHKVV 525
C V+
Sbjct: 480 EVLCSGTVI 506
Score = 220 bits (474), Expect(3) = 2e-059
Identities = 97/158 (61%), Positives = 107/158 (67%)
Frame = -3 / -2
Query: 499 LGYKRFCCCKYKLGTL*RCGERDSLIGFVNDLGPQPFQALGRDLRDGDKGVEFLLGILLI 320
L ++ CCCKYKL TL*RC DSLI F+NDLG QPFQAL RDL DKGVEFLLGILL+
Sbjct: 480 LWIQKVCCCKYKLKTL*RCLRCDSLISFINDLGSQPFQALSRDLSHRDKGVEFLLGILLV 301
Query: 319 VPLAGDPHTNPPRHXXXXXXXDVLVELHIDPDVRGAHGLLCKLPDLLDGVGXXXXXXXXX 140
VPLAG+PHTNPP H DVLVELH++PDV GAH LLCKLPDLLDG+G
Sbjct: 300 VPLAGNPHTNPPWHAPDSTAPDVLVELHVNPDVGGAHSLLCKLPDLLDGIGCLLLECAAV 121
Query: 139 XXXXXVDGVLPGDHXXXXXXXXXXXRHISSAPGAGGRI 26
VDGVLPGDH RH+SSAP A R+
Sbjct: 120 EALVEVDGVLPGDHLLLPCRSSLPVRHLSSAPSANRRL 7
Score = 150 bits (322), Expect(4) = 2e-055
Identities = 64/71 (90%), Positives = 66/71 (92%)
Frame = -1 / -3
Query: 258 QMCLLSFTSILTSVVPMAFCANFLISLMALGAFFLNVQPWRRLWRLMVYSLVTTSSFLDA 79
QMCLLSFTSILTSVVP+AFCANFLISL ALGAFFLNVQPW+RLWRLMVYSLVTTSSFL A
Sbjct: 239 QMCLLSFTSILTSVVPIAFCANFLISLTALGAFFLNVQPWKRLWRLMVYSLVTTSSFLAA 60
Query: 78 PPFPCDISPLL 46
PPF ISPLL
Sbjct: 59 PPFLSAISPLL 27
Score = 45.5 bits (93), Expect(4) = 2e-055
Identities = 21/33 (63%), Positives = 24/33 (72%)
Frame = -2 / -1
Query: 488 KVLLLQIQTRNSLKMWRTRQLNRFRQRPWSPAL 390
K LLLQIQT+NSLKM + LN+ Q PW PAL
Sbjct: 469 KGLLLQIQTKNSLKMLKM**LNQLHQ*PWFPAL 371
Score = 44.1 bits (90), Expect(4) = 2e-055
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = -2 / -1
Query: 335 WHPPHRSSCGRSSHEP 288
WHPP RSSCG+SSHEP
Sbjct: 316 WHPPRRSSCGQSSHEP 269
Score = 34.1 bits (68), Expect(4) = 2e-055
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = -1 / -3
Query: 390 FKPSAGISATVTRE 349
FKPSAGISATVTRE
Sbjct: 371 FKPSAGISATVTRE 330
Score = 27.2 bits (53), Expect(3) = 2e-059
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = -1 / -1
Query: 546 CNSVAEIDNFVNTKT 502
CNS+ EIDNFV + T
Sbjct: 544 CNSIEEIDNFVMSIT 500
Score = 22.1 bits (42), Expect(3) = 2e-059
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = -3 / -3
Query: 508 KNFLGYKRF 482
+NF GYKRF
Sbjct: 488 QNFFGYKRF 462
>gb|AW677661.1|AW677661 WS1_10_H03.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 572
Score = 222 bits (479), Expect = 4e-057
Identities = 95/121 (78%), Positives = 101/121 (83%)
Frame = +2 / +1
Query: 71 KGGASRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTTDVRIDVKLNK 250
+G +RK+EVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTTDVRIDVKLNK
Sbjct: 79 RGAGTRKDEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTTDVRIDVKLNK 258
Query: 251 HIWSSGIXXXXXXXXXXXXXXXNDEEDAKEELYSLVTVAEIPAEGLKGLGTKVVDETD*A 430
HIWSSGI NDEEDAKEELYSLVTVAEIP EGLKGLGTKVV++ D*
Sbjct: 259 HIWSSGIRSVPRRVRVRIARKRNDEEDAKEELYSLVTVAEIPPEGLKGLGTKVVEDED*V 438
Query: 431 V 433
+
Sbjct: 439 L 441
Score = 123 bits (264), Expect = 2e-027
Identities = 57/112 (50%), Positives = 69/112 (61%)
Frame = -3 / -3
Query: 433 DSLIGFVNDLGPQPFQALGRDLRDGDKGVEFLLGILLIVPLAGDPHTNPPRHXXXXXXXD 254
+ LI +N+L Q F+ L RDL + D+GVEFLL I L+VPLAG+ T+ PRH D
Sbjct: 441 EDLILILNNLSSQTFETLRRDLSNCDQGVEFLLSIFLVVPLAGNSDTDSPRHTTDTTAPD 262
Query: 253 VLVELHIDPDVRGAHGLLCKLPDLLDGVGXXXXXXXXXXXXXXVDGVLPGDH 98
VLVELHI+PD+ HGLL KLPDLLDG+ VDGVL G H
Sbjct: 261 VLVELHINPDICSTHGLLSKLPDLLDGIWGLLLEGASVEALVEVDGVLAGYH 106
Score = 122 bits (261), Expect = 5e-027
Identities = 53/90 (58%), Positives = 63/90 (70%)
Frame = +1 / +3
Query: 139 PRLHIQEEGTQRHQGDQEVCTEGHGHHGRQDRCEAQQAHLEQRDQERAAEGSCEDRPQEE 318
PR+H+QEEG + HQGDQEVC+EGHG++ QD CEAQQAHLEQ A C++ PQEE
Sbjct: 147 PRMHLQEEGPKCHQGDQEVCSEGHGYYRCQD*CEAQQAHLEQWYP*CAEASPCQNCPQEE 326
Query: 319 R*GGCQGGTLLPCHRRGDPCRGLERAGDQG 408
R G C GGTLLP H DP G +R G+ G
Sbjct: 327 RRGRC*GGTLLPGHSC*DPSGGSQRFGN*G 416
Score = 118 bits (252), Expect(3) = 9e-030
Identities = 51/56 (91%), Positives = 51/56 (91%)
Frame = -1 / -1
Query: 258 QMCLLSFTSILTSVVPMAFCANFLISLMALGAFFLNVQPWRRLWRLMVYSLVTTSS 91
QMCLLSFTSILTSVVPMAF ANFLISLMA GAFFL V PWRRLWRLMVYS VTTSS
Sbjct: 266 QMCLLSFTSILTSVVPMAF*ANFLISLMAFGAFFLKVHPWRRLWRLMVYSRVTTSS 99
Score = 28.1 bits (55), Expect(3) = 9e-030
Identities = 11/13 (84%), Positives = 12/13 (92%)
Frame = -1 / -1
Query: 387 KPSAGISATVTRE 349
+PS GISATVTRE
Sbjct: 395 RPSGGISATVTRE 357
Score = 22.6 bits (43), Expect(3) = 9e-030
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = -2 / -2
Query: 332 HPPHRSSCGRSSH 294
H P RSSCG+ H
Sbjct: 340 HLPRRSSCGQF*H 302
>gb|CX609218.1|CX609218 ANR1_11_H04.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_11_H04_A002 3', mRNA sequence
Length = 593
Score = 222 bits (479), Expect = 4e-057
Identities = 95/121 (78%), Positives = 101/121 (83%)
Frame = +2 / +2
Query: 71 KGGASRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTTDVRIDVKLNK 250
+G +RK+EVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTTDVRIDVKLNK
Sbjct: 95 RGAGTRKDEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTTDVRIDVKLNK 274
Query: 251 HIWSSGIXXXXXXXXXXXXXXXNDEEDAKEELYSLVTVAEIPAEGLKGLGTKVVDETD*A 430
HIWSSGI NDEEDAKEELYSLVTVAEIP EGLKGLGTKVV++ D*
Sbjct: 275 HIWSSGIRSVPRRVRVRIARKRNDEEDAKEELYSLVTVAEIPPEGLKGLGTKVVEDED*V 454
Query: 431 V 433
+
Sbjct: 455 L 457
Score = 123 bits (264), Expect = 2e-027
Identities = 57/112 (50%), Positives = 69/112 (61%)
Frame = -3 / -2
Query: 433 DSLIGFVNDLGPQPFQALGRDLRDGDKGVEFLLGILLIVPLAGDPHTNPPRHXXXXXXXD 254
+ LI +N+L Q F+ L RDL + D+GVEFLL I L+VPLAG+ T+ PRH D
Sbjct: 457 EDLILILNNLSSQTFETLRRDLSNCDQGVEFLLSIFLVVPLAGNSDTDSPRHTTDTTAPD 278
Query: 253 VLVELHIDPDVRGAHGLLCKLPDLLDGVGXXXXXXXXXXXXXXVDGVLPGDH 98
VLVELHI+PD+ HGLL KLPDLLDG+ VDGVL G H
Sbjct: 277 VLVELHINPDICSTHGLLSKLPDLLDGIWGLLLEGASVEALVEVDGVLAGYH 122
Score = 122 bits (261), Expect = 5e-027
Identities = 53/90 (58%), Positives = 63/90 (70%)
Frame = +1 / +1
Query: 139 PRLHIQEEGTQRHQGDQEVCTEGHGHHGRQDRCEAQQAHLEQRDQERAAEGSCEDRPQEE 318
PR+H+QEEG + HQGDQEVC+EGHG++ QD CEAQQAHLEQ A C++ PQEE
Sbjct: 163 PRMHLQEEGPKCHQGDQEVCSEGHGYYRCQD*CEAQQAHLEQWYP*CAEASPCQNCPQEE 342
Query: 319 R*GGCQGGTLLPCHRRGDPCRGLERAGDQG 408
R G C GGTLLP H DP G +R G+ G
Sbjct: 343 RRGRC*GGTLLPGHSC*DPSGGSQRFGN*G 432
Score = 118 bits (252), Expect(3) = 9e-030
Identities = 51/56 (91%), Positives = 51/56 (91%)
Frame = -1 / -3
Query: 258 QMCLLSFTSILTSVVPMAFCANFLISLMALGAFFLNVQPWRRLWRLMVYSLVTTSS 91
QMCLLSFTSILTSVVPMAF ANFLISLMA GAFFL V PWRRLWRLMVYS VTTSS
Sbjct: 282 QMCLLSFTSILTSVVPMAF*ANFLISLMAFGAFFLKVHPWRRLWRLMVYSRVTTSS 115
Score = 28.1 bits (55), Expect(3) = 9e-030
Identities = 11/13 (84%), Positives = 12/13 (92%)
Frame = -1 / -3
Query: 387 KPSAGISATVTRE 349
+PS GISATVTRE
Sbjct: 411 RPSGGISATVTRE 373
Score = 22.6 bits (43), Expect(3) = 9e-030
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = -2 / -1
Query: 332 HPPHRSSCGRSSH 294
H P RSSCG+ H
Sbjct: 356 HLPRRSSCGQF*H 318
>gb|CX612032.1|CX612032 ANR1_28_D05.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_28_D05_A002 3', mRNA sequence
Length = 637
Score = 222 bits (479), Expect = 4e-057
Identities = 95/121 (78%), Positives = 101/121 (83%)
Frame = +2 / +2
Query: 71 KGGASRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTTDVRIDVKLNK 250
+G +RK+EVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTTDVRIDVKLNK
Sbjct: 95 RGAGTRKDEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTTDVRIDVKLNK 274
Query: 251 HIWSSGIXXXXXXXXXXXXXXXNDEEDAKEELYSLVTVAEIPAEGLKGLGTKVVDETD*A 430
HIWSSGI NDEEDAKEELYSLVTVAEIP EGLKGLGTKVV++ D*
Sbjct: 275 HIWSSGIRSVPRRVRVRIARKRNDEEDAKEELYSLVTVAEIPPEGLKGLGTKVVEDED*V 454
Query: 431 V 433
+
Sbjct: 455 L 457
Score = 123 bits (264), Expect = 2e-027
Identities = 57/112 (50%), Positives = 69/112 (61%)
Frame = -3 / -1
Query: 433 DSLIGFVNDLGPQPFQALGRDLRDGDKGVEFLLGILLIVPLAGDPHTNPPRHXXXXXXXD 254
+ LI +N+L Q F+ L RDL + D+GVEFLL I L+VPLAG+ T+ PRH D
Sbjct: 457 EDLILILNNLSSQTFETLRRDLSNCDQGVEFLLSIFLVVPLAGNSDTDSPRHTTDTTAPD 278
Query: 253 VLVELHIDPDVRGAHGLLCKLPDLLDGVGXXXXXXXXXXXXXXVDGVLPGDH 98
VLVELHI+PD+ HGLL KLPDLLDG+ VDGVL G H
Sbjct: 277 VLVELHINPDICSTHGLLSKLPDLLDGIWGLLLEGASVEALVEVDGVLAGYH 122
Score = 122 bits (261), Expect = 5e-027
Identities = 53/90 (58%), Positives = 63/90 (70%)
Frame = +1 / +1
Query: 139 PRLHIQEEGTQRHQGDQEVCTEGHGHHGRQDRCEAQQAHLEQRDQERAAEGSCEDRPQEE 318
PR+H+QEEG + HQGDQEVC+EGHG++ QD CEAQQAHLEQ A C++ PQEE
Sbjct: 163 PRMHLQEEGPKCHQGDQEVCSEGHGYYRCQD*CEAQQAHLEQWYP*CAEASPCQNCPQEE 342
Query: 319 R*GGCQGGTLLPCHRRGDPCRGLERAGDQG 408
R G C GGTLLP H DP G +R G+ G
Sbjct: 343 RRGRC*GGTLLPGHSC*DPSGGSQRFGN*G 432
Score = 118 bits (252), Expect(3) = 9e-030
Identities = 51/56 (91%), Positives = 51/56 (91%)
Frame = -1 / -2
Query: 258 QMCLLSFTSILTSVVPMAFCANFLISLMALGAFFLNVQPWRRLWRLMVYSLVTTSS 91
QMCLLSFTSILTSVVPMAF ANFLISLMA GAFFL V PWRRLWRLMVYS VTTSS
Sbjct: 282 QMCLLSFTSILTSVVPMAF*ANFLISLMAFGAFFLKVHPWRRLWRLMVYSRVTTSS 115
Score = 28.1 bits (55), Expect(3) = 9e-030
Identities = 11/13 (84%), Positives = 12/13 (92%)
Frame = -1 / -2
Query: 387 KPSAGISATVTRE 349
+PS GISATVTRE
Sbjct: 411 RPSGGISATVTRE 373
Score = 22.6 bits (43), Expect(3) = 9e-030
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = -2 / -3
Query: 332 HPPHRSSCGRSSH 294
H P RSSCG+ H
Sbjct: 356 HLPRRSSCGQF*H 318
>gb|AW563235.1|AW563235 LG1_204_D05.g1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 570
Score = 221 bits (477), Expect = 8e-057
Identities = 95/120 (79%), Positives = 100/120 (83%)
Frame = +2 / +2
Query: 74 GGASRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTTDVRIDVKLNKH 253
G +RK+EVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTTDVRIDVKLNKH
Sbjct: 2 GAGTRKDEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTTDVRIDVKLNKH 181
Query: 254 IWSSGIXXXXXXXXXXXXXXXNDEEDAKEELYSLVTVAEIPAEGLKGLGTKVVDETD*AV 433
IWSSGI NDEEDAKEELYSLVTVAEIP EGLKGLGTKVV++ D* +
Sbjct: 182 IWSSGIRSVPRRVRVRIARKRNDEEDAKEELYSLVTVAEIPPEGLKGLGTKVVEDED*VL 361
Score = 123 bits (264), Expect = 2e-027
Identities = 57/112 (50%), Positives = 69/112 (61%)
Frame = -3 / -3
Query: 433 DSLIGFVNDLGPQPFQALGRDLRDGDKGVEFLLGILLIVPLAGDPHTNPPRHXXXXXXXD 254
+ LI +N+L Q F+ L RDL + D+GVEFLL I L+VPLAG+ T+ PRH D
Sbjct: 361 EDLILILNNLSSQTFETLRRDLSNCDQGVEFLLSIFLVVPLAGNSDTDSPRHTTDTTAPD 182
Query: 253 VLVELHIDPDVRGAHGLLCKLPDLLDGVGXXXXXXXXXXXXXXVDGVLPGDH 98
VLVELHI+PD+ HGLL KLPDLLDG+ VDGVL G H
Sbjct: 181 VLVELHINPDICSTHGLLSKLPDLLDGIWGLLLEGASVEALVEVDGVLAGYH 26
Score = 122 bits (261), Expect = 5e-027
Identities = 53/90 (58%), Positives = 63/90 (70%)
Frame = +1 / +1
Query: 139 PRLHIQEEGTQRHQGDQEVCTEGHGHHGRQDRCEAQQAHLEQRDQERAAEGSCEDRPQEE 318
PR+H+QEEG + HQGDQEVC+EGHG++ QD CEAQQAHLEQ A C++ PQEE
Sbjct: 67 PRMHLQEEGPKCHQGDQEVCSEGHGYYRCQD*CEAQQAHLEQWYP*CAEASPCQNCPQEE 246
Query: 319 R*GGCQGGTLLPCHRRGDPCRGLERAGDQG 408
R G C GGTLLP H DP G +R G+ G
Sbjct: 247 RRGRC*GGTLLPGHSC*DPSGGSQRFGN*G 336
Score = 118 bits (252), Expect(3) = 9e-030
Identities = 51/56 (91%), Positives = 51/56 (91%)
Frame = -1 / -1
Query: 258 QMCLLSFTSILTSVVPMAFCANFLISLMALGAFFLNVQPWRRLWRLMVYSLVTTSS 91
QMCLLSFTSILTSVVPMAF ANFLISLMA GAFFL V PWRRLWRLMVYS VTTSS
Sbjct: 186 QMCLLSFTSILTSVVPMAF*ANFLISLMAFGAFFLKVHPWRRLWRLMVYSRVTTSS 19
Score = 28.1 bits (55), Expect(3) = 9e-030
Identities = 11/13 (84%), Positives = 12/13 (92%)
Frame = -1 / -1
Query: 387 KPSAGISATVTRE 349
+PS GISATVTRE
Sbjct: 315 RPSGGISATVTRE 277
Score = 22.6 bits (43), Expect(3) = 9e-030
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = -2 / -2
Query: 332 HPPHRSSCGRSSH 294
H P RSSCG+ H
Sbjct: 260 HLPRRSSCGQF*H 222
>gb|CX609304.1|CX609304 ANR1_11_H04.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_11_H04_A002 5', mRNA sequence
Length = 614
Score = 219 bits (473), Expect = 3e-056
Identities = 94/121 (77%), Positives = 100/121 (82%)
Frame = +2 / +2
Query: 71 KGGASRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTTDVRIDVKLNK 250
+G +RK+EVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTTDV IDVKLNK
Sbjct: 86 RGAGTRKDEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTTDVMIDVKLNK 265
Query: 251 HIWSSGIXXXXXXXXXXXXXXXNDEEDAKEELYSLVTVAEIPAEGLKGLGTKVVDETD*A 430
HIWSSGI NDEEDAKEELYSLVTVAEIP EGLKGLGTKVV++ D*
Sbjct: 266 HIWSSGIRSVPRRVRVRIARKRNDEEDAKEELYSLVTVAEIPPEGLKGLGTKVVEDED*V 445
Query: 431 V 433
+
Sbjct: 446 L 448
Score = 120 bits (256), Expect = 2e-026
Identities = 52/90 (57%), Positives = 62/90 (68%)
Frame = +1 / +1
Query: 139 PRLHIQEEGTQRHQGDQEVCTEGHGHHGRQDRCEAQQAHLEQRDQERAAEGSCEDRPQEE 318
PR+H+QEEG + HQGDQEVC+EGHG++ D CEAQQAHLEQ A C++ PQEE
Sbjct: 154 PRMHLQEEGPKCHQGDQEVCSEGHGYYRCHD*CEAQQAHLEQWYP*CAEASPCQNCPQEE 333
Query: 319 R*GGCQGGTLLPCHRRGDPCRGLERAGDQG 408
R G C GGTLLP H DP G +R G+ G
Sbjct: 334 RRGRC*GGTLLPGHSC*DPSGGSQRFGN*G 423
Score = 119 bits (255), Expect = 3e-026
Identities = 56/112 (50%), Positives = 68/112 (60%)
Frame = -3 / -2
Query: 433 DSLIGFVNDLGPQPFQALGRDLRDGDKGVEFLLGILLIVPLAGDPHTNPPRHXXXXXXXD 254
+ LI +N+L Q F+ L RDL + D+GVEFLL I L+VPLAG+ T+ PRH D
Sbjct: 448 EDLILILNNLSSQTFETLRRDLSNCDQGVEFLLSIFLVVPLAGNSDTDSPRHTTDTTAPD 269
Query: 253 VLVELHIDPDVRGAHGLLCKLPDLLDGVGXXXXXXXXXXXXXXVDGVLPGDH 98
VLVELHI+ D+ HGLL KLPDLLDG+ VDGVL G H
Sbjct: 268 VLVELHINHDICSTHGLLSKLPDLLDGIWGLLLEGASVEALVEVDGVLAGYH 113
Score = 117 bits (250), Expect(3) = 2e-029
Identities = 50/56 (89%), Positives = 51/56 (91%)
Frame = -1 / -3
Query: 258 QMCLLSFTSILTSVVPMAFCANFLISLMALGAFFLNVQPWRRLWRLMVYSLVTTSS 91
QMCLLSFTSI+TSVVPMAF ANFLISLMA GAFFL V PWRRLWRLMVYS VTTSS
Sbjct: 273 QMCLLSFTSIMTSVVPMAF*ANFLISLMAFGAFFLKVHPWRRLWRLMVYSRVTTSS 106
Score = 28.1 bits (55), Expect(3) = 2e-029
Identities = 11/13 (84%), Positives = 12/13 (92%)
Frame = -1 / -3
Query: 387 KPSAGISATVTRE 349
+PS GISATVTRE
Sbjct: 402 RPSGGISATVTRE 364
Score = 22.6 bits (43), Expect(3) = 2e-029
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = -2 / -1
Query: 332 HPPHRSSCGRSSH 294
H P RSSCG+ H
Sbjct: 347 HLPRRSSCGQF*H 309
>gb|AW677706.1|AW677706 WS1_10_H03.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 458
Score = 216 bits (466), Expect = 3e-055
Identities = 93/120 (77%), Positives = 98/120 (81%)
Frame = +2 / +1
Query: 74 GGASRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTTDVRIDVKLNKH 253
G +RK+EVVTREYTINLHK LHGCTFKKKAPNAIKEIRKFAQKAMGTTDVRIDVKLNKH
Sbjct: 1 GAGTRKDEVVTREYTINLHKGLHGCTFKKKAPNAIKEIRKFAQKAMGTTDVRIDVKLNKH 180
Query: 254 IWSSGIXXXXXXXXXXXXXXXNDEEDAKEELYSLVTVAEIPAEGLKGLGTKVVDETD*AV 433
IWSSGI NDEEDAKEELYSLVTVAEIP EG KGLGTKVV++ D* +
Sbjct: 181 IWSSGIRSVPRRVRVRIARKRNDEEDAKEELYSLVTVAEIPPEGFKGLGTKVVEDED*VL 360
Score = 123 bits (263), Expect = 3e-027
Identities = 53/90 (58%), Positives = 63/90 (70%)
Frame = +1 / +3
Query: 139 PRLHIQEEGTQRHQGDQEVCTEGHGHHGRQDRCEAQQAHLEQRDQERAAEGSCEDRPQEE 318
PR+H+QEEG + HQGDQEVC+EGHG++ QD CEAQQAHLEQ A C++ PQEE
Sbjct: 66 PRMHLQEEGPKCHQGDQEVCSEGHGYYRCQD*CEAQQAHLEQWYP*CAEASPCQNCPQEE 245
Query: 319 R*GGCQGGTLLPCHRRGDPCRGLERAGDQG 408
R G C GGTLLP H DP G +R G+ G
Sbjct: 246 RRGRC*GGTLLPGHSC*DPSGGFQRFGN*G 335
Score = 122 bits (260), Expect = 7e-027
Identities = 55/112 (49%), Positives = 69/112 (61%)
Frame = -3 / -3
Query: 433 DSLIGFVNDLGPQPFQALGRDLRDGDKGVEFLLGILLIVPLAGDPHTNPPRHXXXXXXXD 254
+ LI +N+L Q F+ L RDL + D+GV+FLL I L+VPLAG+ T+ PRH +
Sbjct: 360 EDLILILNNLSSQTFETLRRDLSNCDQGVKFLLSIFLVVPLAGNSDTDSPRHTTDTTAPN 181
Query: 253 VLVELHIDPDVRGAHGLLCKLPDLLDGVGXXXXXXXXXXXXXXVDGVLPGDH 98
VLVELHI+PD+ HGLL KLPDLLDG+ VDGVL G H
Sbjct: 180 VLVELHINPDICSTHGLLSKLPDLLDGIWGLLLEGASVEALVEVDGVLAGYH 25
Score = 115 bits (245), Expect(3) = 3e-029
Identities = 50/56 (89%), Positives = 50/56 (89%)
Frame = -1 / -1
Query: 258 QMCLLSFTSILTSVVPMAFCANFLISLMALGAFFLNVQPWRRLWRLMVYSLVTTSS 91
QMCLLSFTSILTSVVPMAF ANFLISLMA GAFFL V PWR LWRLMVYS VTTSS
Sbjct: 185 QMCLLSFTSILTSVVPMAF*ANFLISLMAFGAFFLKVHPWRPLWRLMVYSRVTTSS 18
Score = 29.5 bits (58), Expect(3) = 3e-029
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = -1 / -1
Query: 387 KPSAGISATVTRE 349
KPS GISATVTRE
Sbjct: 314 KPSGGISATVTRE 276
Score = 22.6 bits (43), Expect(3) = 3e-029
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = -2 / -2
Query: 332 HPPHRSSCGRSSH 294
H P RSSCG+ H
Sbjct: 259 HLPRRSSCGQF*H 221
>gb|CX612122.1|CX612122 ANR1_28_D05.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_28_D05_A002 5', mRNA sequence
Length = 653
Score = 214 bits (462), Expect = 9e-055
Identities = 92/121 (76%), Positives = 99/121 (81%)
Frame = +2 / +2
Query: 71 KGGASRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTTDVRIDVKLNK 250
+G +RK+EVVTREYTINLHKRL GCTF+KKAPNAIKEIRKFA KAMGTTDVRIDVKLNK
Sbjct: 86 RGAGTRKDEVVTREYTINLHKRLRGCTFEKKAPNAIKEIRKFAHKAMGTTDVRIDVKLNK 265
Query: 251 HIWSSGIXXXXXXXXXXXXXXXNDEEDAKEELYSLVTVAEIPAEGLKGLGTKVVDETD*A 430
HIWSSGI NDEEDAKEELYSLVTVAEIP EGLKGLGTKVV++ D*
Sbjct: 266 HIWSSGIRSVPRRVRVRIARKRNDEEDAKEELYSLVTVAEIPPEGLKGLGTKVVEDED*V 445
Query: 431 V 433
+
Sbjct: 446 L 448
Score = 122 bits (262), Expect = 3e-027
Identities = 56/112 (50%), Positives = 69/112 (61%)
Frame = -3 / -2
Query: 433 DSLIGFVNDLGPQPFQALGRDLRDGDKGVEFLLGILLIVPLAGDPHTNPPRHXXXXXXXD 254
+ LI +N+L Q F+ L RDL + D+GVEFLL I L+VPLAG+ T+ PRH D
Sbjct: 448 EDLILILNNLSSQTFETLRRDLSNCDQGVEFLLSIFLVVPLAGNSDTDSPRHTTDTTAPD 269
Query: 253 VLVELHIDPDVRGAHGLLCKLPDLLDGVGXXXXXXXXXXXXXXVDGVLPGDH 98
VLVELHI+PD+ HGL+ KLPDLLDG+ VDGVL G H
Sbjct: 268 VLVELHINPDICSTHGLVSKLPDLLDGIWGLLLEGASAEALVEVDGVLAGYH 113
Score = 119 bits (254), Expect = 4e-026
Identities = 51/90 (56%), Positives = 63/90 (70%)
Frame = +1 / +1
Query: 139 PRLHIQEEGTQRHQGDQEVCTEGHGHHGRQDRCEAQQAHLEQRDQERAAEGSCEDRPQEE 318
PR+H++EEG + HQGDQEVC++GHG++ QD CEAQQAHLEQ A C++ PQEE
Sbjct: 154 PRMHLREEGPKCHQGDQEVCSQGHGYYRCQD*CEAQQAHLEQWYP*CAEASPCQNCPQEE 333
Query: 319 R*GGCQGGTLLPCHRRGDPCRGLERAGDQG 408
R G C GGTLLP H DP G +R G+ G
Sbjct: 334 RRGRC*GGTLLPGHSC*DPSGGSQRFGN*G 423
Score = 106 bits (226), Expect(3) = 3e-026
Identities = 48/56 (85%), Positives = 48/56 (85%)
Frame = -1 / -3
Query: 258 QMCLLSFTSILTSVVPMAFCANFLISLMALGAFFLNVQPWRRLWRLMVYSLVTTSS 91
QMCLLSFTSILTSVVPMA ANFLISLMA GAFF V P RRLWRLMVYS VTTSS
Sbjct: 273 QMCLLSFTSILTSVVPMAL*ANFLISLMAFGAFFSKVHPRRRLWRLMVYSRVTTSS 106
Score = 28.1 bits (55), Expect(3) = 3e-026
Identities = 11/13 (84%), Positives = 12/13 (92%)
Frame = -1 / -3
Query: 387 KPSAGISATVTRE 349
+PS GISATVTRE
Sbjct: 402 RPSGGISATVTRE 364
Score = 22.6 bits (43), Expect(3) = 3e-026
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = -2 / -1
Query: 332 HPPHRSSCGRSSH 294
H P RSSCG+ H
Sbjct: 347 HLPRRSSCGQF*H 309
>gb|AW286714.2|AW286714 LG1_204_D05.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 393
Score = 193 bits (415), Expect = 3e-048
Identities = 82/102 (80%), Positives = 85/102 (83%)
Frame = +2 / +1
Query: 71 KGGASRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTTDVRIDVKLNK 250
+G +RK+EVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTTDVRIDVKLNK
Sbjct: 85 RGAGTRKDEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTTDVRIDVKLNK 264
Query: 251 HIWSSGIXXXXXXXXXXXXXXXNDEEDAKEELYSLVTVAEIP 376
HIWSSGI NDEEDAKEELYSLVTVAEIP
Sbjct: 265 HIWSSGIRSVPRRVRVRIARKRNDEEDAKEELYSLVTVAEIP 390
Score = 118 bits (252), Expect(3) = 5e-028
Identities = 51/56 (91%), Positives = 51/56 (91%)
Frame = -1 / -2
Query: 258 QMCLLSFTSILTSVVPMAFCANFLISLMALGAFFLNVQPWRRLWRLMVYSLVTTSS 91
QMCLLSFTSILTSVVPMAF ANFLISLMA GAFFL V PWRRLWRLMVYS VTTSS
Sbjct: 272 QMCLLSFTSILTSVVPMAF*ANFLISLMAFGAFFLKVHPWRRLWRLMVYSRVTTSS 105
Score = 115 bits (246), Expect = 6e-025
Identities = 49/79 (62%), Positives = 57/79 (72%)
Frame = +1 / +3
Query: 139 PRLHIQEEGTQRHQGDQEVCTEGHGHHGRQDRCEAQQAHLEQRDQERAAEGSCEDRPQEE 318
PR+H+QEEG + HQGDQEVC+EGHG++ QD CEAQQAHLEQ A C++ PQEE
Sbjct: 153 PRMHLQEEGPKCHQGDQEVCSEGHGYYRCQD*CEAQQAHLEQWYP*CAEASPCQNCPQEE 332
Query: 319 R*GGCQGGTLLPCHRRGDP 375
R G C GGTLLP H DP
Sbjct: 333 RRGRC*GGTLLPGHSC*DP 389
Score = 109 bits (233), Expect = 3e-023
Identities = 50/93 (53%), Positives = 58/93 (62%)
Frame = -3 / -1
Query: 376 RDLRDGDKGVEFLLGILLIVPLAGDPHTNPPRHXXXXXXXDVLVELHIDPDVRGAHGLLC 197
RDL + D+GVEFLL I L+VPLAG+ T+ PRH DVLVELHI+PD+ HGLL
Sbjct: 390 RDLSNCDQGVEFLLSIFLVVPLAGNSDTDSPRHTTDTTAPDVLVELHINPDICSTHGLLS 211
Query: 196 KLPDLLDGVGXXXXXXXXXXXXXXVDGVLPGDH 98
KLPDLLDG+ VDGVL G H
Sbjct: 210 KLPDLLDGIWGLLLEGASVEALVEVDGVLAGYH 112
Score = 22.6 bits (43), Expect(3) = 5e-028
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = -2 / -3
Query: 332 HPPHRSSCGRSSH 294
H P RSSCG+ H
Sbjct: 346 HLPRRSSCGQF*H 308
Score = 22.1 bits (42), Expect(3) = 5e-028
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = -1 / -2
Query: 375 GISATVTRE 349
GISATVTRE
Sbjct: 389 GISATVTRE 363
>gb|CL187157.1|CL187157 104_402_10900693_114_32432_055 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10900693, DNA
sequence
Length = 782
Score = 167 bits (359), Expect = 1e-040
Identities = 74/95 (77%), Positives = 77/95 (81%)
Frame = +2 / +2
Query: 149 TFKKKAPNAIKEIRKFAQKAMGTTDVRIDVKLNKHIWSSGIXXXXXXXXXXXXXXXNDEE 328
TFKKKAPNAIKEIRKFAQKAMGTTDVRIDVKLNKHIWSSGI NDEE
Sbjct: 80 TFKKKAPNAIKEIRKFAQKAMGTTDVRIDVKLNKHIWSSGIRSVPRRVRVRIARKRNDEE 259
Query: 329 DAKEELYSLVTVAEIPAEGLKGLGTKVVDETD*AV 433
DAKEELYSLVTVAEIP EGLKGLGTKVV++ D* +
Sbjct: 260 DAKEELYSLVTVAEIPPEGLKGLGTKVVEDED*VL 364
Score = 116 bits (248), Expect = 3e-025
Identities = 50/88 (56%), Positives = 62/88 (70%)
Frame = -3 / -2
Query: 433 DSLIGFVNDLGPQPFQALGRDLRDGDKGVEFLLGILLIVPLAGDPHTNPPRHXXXXXXXD 254
+ LI +N+L Q F+ L RDL + D+GVEFLL I L+VPLAG+ T+ PRH D
Sbjct: 364 EDLILILNNLSSQTFETLRRDLSNCDQGVEFLLSIFLVVPLAGNSDTDSPRHTTDTTAPD 185
Query: 253 VLVELHIDPDVRGAHGLLCKLPDLLDGV 170
VLVELHI+PD+ HGLL KLPDLLDG+
Sbjct: 184 VLVELHINPDICSTHGLLSKLPDLLDGI 101
Score = 116 bits (247), Expect = 4e-025
Identities = 51/87 (58%), Positives = 60/87 (68%)
Frame = +1 / +1
Query: 148 HIQEEGTQRHQGDQEVCTEGHGHHGRQDRCEAQQAHLEQRDQERAAEGSCEDRPQEER*G 327
H+QEEG + HQGDQEVC+EGHG++ QD CEAQQAHLEQ A C++ PQEER G
Sbjct: 79 HLQEEGPKCHQGDQEVCSEGHGYYRCQD*CEAQQAHLEQWYP*CAEASPCQNCPQEERRG 258
Query: 328 GCQGGTLLPCHRRGDPCRGLERAGDQG 408
C GGTLLP H DP G +R G+ G
Sbjct: 259 RC*GGTLLPGHSC*DPSGGSQRFGN*G 339
>gb|CW363851.1|CW363851 fsbb001f035k08f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f035k08, DNA
sequence
Length = 706
Score = 167 bits (359), Expect = 1e-040
Identities = 74/95 (77%), Positives = 77/95 (81%)
Frame = +2 / -3
Query: 149 TFKKKAPNAIKEIRKFAQKAMGTTDVRIDVKLNKHIWSSGIXXXXXXXXXXXXXXXNDEE 328
TFKKKAPNAIKEIRKFAQKAMGTTDVRIDVKLNKHIWSSGI NDEE
Sbjct: 626 TFKKKAPNAIKEIRKFAQKAMGTTDVRIDVKLNKHIWSSGIRSVPRRVRVRIARKRNDEE 447
Query: 329 DAKEELYSLVTVAEIPAEGLKGLGTKVVDETD*AV 433
DAKEELYSLVTVAEIP EGLKGLGTKVV++ D* +
Sbjct: 446 DAKEELYSLVTVAEIPPEGLKGLGTKVVEDED*VL 342
Score = 116 bits (248), Expect = 3e-025
Identities = 50/88 (56%), Positives = 62/88 (70%)
Frame = -3 / +3
Query: 433 DSLIGFVNDLGPQPFQALGRDLRDGDKGVEFLLGILLIVPLAGDPHTNPPRHXXXXXXXD 254
+ LI +N+L Q F+ L RDL + D+GVEFLL I L+VPLAG+ T+ PRH D
Sbjct: 342 EDLILILNNLSSQTFETLRRDLSNCDQGVEFLLSIFLVVPLAGNSDTDSPRHTTDTTAPD 521
Query: 253 VLVELHIDPDVRGAHGLLCKLPDLLDGV 170
VLVELHI+PD+ HGLL KLPDLLDG+
Sbjct: 522 VLVELHINPDICSTHGLLSKLPDLLDGI 605
Score = 116 bits (247), Expect = 4e-025
Identities = 51/87 (58%), Positives = 60/87 (68%)
Frame = +1 / -2
Query: 148 HIQEEGTQRHQGDQEVCTEGHGHHGRQDRCEAQQAHLEQRDQERAAEGSCEDRPQEER*G 327
H+QEEG + HQGDQEVC+EGHG++ QD CEAQQAHLEQ A C++ PQEER G
Sbjct: 627 HLQEEGPKCHQGDQEVCSEGHGYYRCQD*CEAQQAHLEQWYP*CAEASPCQNCPQEERRG 448
Query: 328 GCQGGTLLPCHRRGDPCRGLERAGDQG 408
C GGTLLP H DP G +R G+ G
Sbjct: 447 RC*GGTLLPGHSC*DPSGGSQRFGN*G 367
>gb|CW363852.1|CW363852 fsbb001f035k08k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f035k08, DNA
sequence
Length = 758
Score = 167 bits (359), Expect = 1e-040
Identities = 74/95 (77%), Positives = 77/95 (81%)
Frame = +2 / +3
Query: 149 TFKKKAPNAIKEIRKFAQKAMGTTDVRIDVKLNKHIWSSGIXXXXXXXXXXXXXXXNDEE 328
TFKKKAPNAIKEIRKFAQKAMGTTDVRIDVKLNKHIWSSGI NDEE
Sbjct: 156 TFKKKAPNAIKEIRKFAQKAMGTTDVRIDVKLNKHIWSSGIRSVPRRVRVRIARKRNDEE 335
Query: 329 DAKEELYSLVTVAEIPAEGLKGLGTKVVDETD*AV 433
DAKEELYSLVTVAEIP EGLKGLGTKVV++ D* +
Sbjct: 336 DAKEELYSLVTVAEIPPEGLKGLGTKVVEDED*VL 440
Score = 116 bits (248), Expect = 3e-025
Identities = 50/88 (56%), Positives = 62/88 (70%)
Frame = -3 / -1
Query: 433 DSLIGFVNDLGPQPFQALGRDLRDGDKGVEFLLGILLIVPLAGDPHTNPPRHXXXXXXXD 254
+ LI +N+L Q F+ L RDL + D+GVEFLL I L+VPLAG+ T+ PRH D
Sbjct: 440 EDLILILNNLSSQTFETLRRDLSNCDQGVEFLLSIFLVVPLAGNSDTDSPRHTTDTTAPD 261
Query: 253 VLVELHIDPDVRGAHGLLCKLPDLLDGV 170
VLVELHI+PD+ HGLL KLPDLLDG+
Sbjct: 260 VLVELHINPDICSTHGLLSKLPDLLDGI 177
Score = 116 bits (247), Expect = 4e-025
Identities = 51/87 (58%), Positives = 60/87 (68%)
Frame = +1 / +2
Query: 148 HIQEEGTQRHQGDQEVCTEGHGHHGRQDRCEAQQAHLEQRDQERAAEGSCEDRPQEER*G 327
H+QEEG + HQGDQEVC+EGHG++ QD CEAQQAHLEQ A C++ PQEER G
Sbjct: 155 HLQEEGPKCHQGDQEVCSEGHGYYRCQD*CEAQQAHLEQWYP*CAEASPCQNCPQEERRG 334
Query: 328 GCQGGTLLPCHRRGDPCRGLERAGDQG 408
C GGTLLP H DP G +R G+ G
Sbjct: 335 RC*GGTLLPGHSC*DPSGGSQRFGN*G 415
>gb|BE918174.1|BE918174 OV1_2_G12.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 337
Score = 137 bits (294), Expect(2) = 1e-033
Identities = 59/86 (68%), Positives = 64/86 (74%)
Frame = +1 / +2
Query: 268 DQERAAEGSCEDRPQEER*GGCQGGTLLPCHRRGDPCRGLERAGDQGR*RNRLSCRVLHI 447
DQERA EGSCED PQEER GGCQGGTLLPCH DPC GLERAG+QG * + LS +L I
Sbjct: 8 DQERATEGSCEDCPQEERRGGCQGGTLLPCHGG*DPC*GLERAGNQGH**S*LSYHILSI 187
Query: 448 FREFLVCICNSKTFCIQGSFCIHKVV 525
FREFLVCICNSK F + C V+
Sbjct: 188 FREFLVCICNSKPFVSKEVLCSGTVI 265
Score = 134 bits (288), Expect(3) = 2e-036
Identities = 55/74 (74%), Positives = 60/74 (81%)
Frame = -3 / -3
Query: 499 LGYKRFCCCKYKLGTL*RCGERDSLIGFVNDLGPQPFQALGRDLRDGDKGVEFLLGILLI 320
L ++ CCCKYKL TL*RC DSLI F+NDLG QPFQAL RDL DKGVEFLLGILL+
Sbjct: 239 LWIQKVCCCKYKLKTL*RCLRCDSLISFINDLGSQPFQALSRDLSHRDKGVEFLLGILLV 60
Query: 319 VPLAGDPHTNPPRH 278
VPLAG+PHTNPP H
Sbjct: 59 VPLAGNPHTNPPWH 18
Score = 104 bits (221), Expect(2) = 3e-027
Identities = 48/62 (77%), Positives = 51/62 (82%)
Frame = +2 / +3
Query: 317 NDEEDAKEELYSLVTVAEIPAEGLKGLGTKVVDETD*AVAFSTSLESS*FVFATAKPFVS 496
NDEEDAKEELYSLVTVAEIPAEGLKGLGTKV+DE D*A+ SLES *FVFATA
Sbjct: 57 NDEEDAKEELYSLVTVAEIPAEGLKGLGTKVIDEAD*AITS*ASLESF*FVFATANLLYP 236
Query: 497 KE 502
K+
Sbjct: 237 KK 242
Score = 45.5 bits (93), Expect(4) = 9e-021
Identities = 21/33 (63%), Positives = 24/33 (72%)
Frame = -2 / -2
Query: 488 KVLLLQIQTRNSLKMWRTRQLNRFRQRPWSPAL 390
K LLLQIQT+NSLKM + LN+ Q PW PAL
Sbjct: 228 KGLLLQIQTKNSLKMLKM**LNQLHQ*PWFPAL 130
Score = 44.1 bits (90), Expect(4) = 9e-021
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = -2 / -2
Query: 335 WHPPHRSSCGRSSHEP 288
WHPP RSSCG+SSHEP
Sbjct: 75 WHPPRRSSCGQSSHEP 28
Score = 38.2 bits (77), Expect(2) = 3e-027
Identities = 15/18 (83%), Positives = 15/18 (83%)
Frame = +3 / +1
Query: 279 CRGGFV*GSPARGTMRRM 332
C GGFV*G PARGT RRM
Sbjct: 19 CHGGFV*GLPARGTTRRM 72
Score = 34.1 bits (68), Expect(4) = 9e-021
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = -1 / -1
Query: 390 FKPSAGISATVTRE 349
FKPSAGISATVTRE
Sbjct: 130 FKPSAGISATVTRE 89
Score = 34.1 bits (68), Expect(3) = 2e-036
Identities = 13/19 (68%), Positives = 16/19 (84%)
Frame = -1 / -2
Query: 558 EN*PCNSVAEIDNFVNTKT 502
+N*PCNS+ EIDNFV + T
Sbjct: 315 KN*PCNSIEEIDNFVMSIT 259
Score = 29.0 bits (57), Expect(4) = 9e-021
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = -2 / -3
Query: 560 KKTSHAILLQK*TTL*IQKLPWIQKVLLLQ 471
K+TSH I L+K*TTL* + K+L +Q
Sbjct: 317 KRTSHVIRLRK*TTL*CRSQYQSTKLLWIQ 228
Score = 26.3 bits (51), Expect(2) = 1e-033
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = +3 / +3
Query: 513 SQSCLFLQQNCMAS 554
SQSCLF Q N MAS
Sbjct: 270 SQSCLFPQSNYMAS 311
Score = 21.2 bits (40), Expect(3) = 2e-036
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -1 / -2
Query: 507 KTSLDTKG 484
KTSLDTKG
Sbjct: 246 KTSLDTKG 223
>gb|BE918375.1|BE918375 OV1_2_G12.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 246
Score = 106 bits (226), Expect(2) = 2e-025
Identities = 43/57 (75%), Positives = 47/57 (82%)
Frame = -3 / -2
Query: 448 RCGERDSLIGFVNDLGPQPFQALGRDLRDGDKGVEFLLGILLIVPLAGDPHTNPPRH 278
+C DSLI F+NDLG QPFQAL RDL DKGVEFLLGILL+VPLAG+PHTNPP H
Sbjct: 188 KCLRCDSLISFINDLGSQPFQALSRDLSHRDKGVEFLLGILLVVPLAGNPHTNPPWH 18
Score = 105 bits (223), Expect(2) = 8e-023
Identities = 45/64 (70%), Positives = 48/64 (75%)
Frame = +1 / +2
Query: 268 DQERAAEGSCEDRPQEER*GGCQGGTLLPCHRRGDPCRGLERAGDQGR*RNRLSCRVLHI 447
DQERA EGSCED PQEER GGCQGGTLLPCH DPC GLERAG+QG * + LS +L I
Sbjct: 8 DQERATEGSCEDCPQEERRGGCQGGTLLPCHGG*DPC*GLERAGNQGH**S*LSYHILSI 187
Query: 448 FREF 459
F
Sbjct: 188 LESF 199
Score = 85.8 bits (181), Expect(3) = 4e-027
Identities = 36/39 (92%), Positives = 38/39 (97%)
Frame = +2 / +3
Query: 317 NDEEDAKEELYSLVTVAEIPAEGLKGLGTKVVDETD*AV 433
NDEEDAKEELYSLVTVAEIPAEGLKGLGTKV+DE D*A+
Sbjct: 57 NDEEDAKEELYSLVTVAEIPAEGLKGLGTKVIDEAD*AI 173
Score = 38.2 bits (77), Expect(3) = 4e-027
Identities = 15/18 (83%), Positives = 15/18 (83%)
Frame = +3 / +1
Query: 279 CRGGFV*GSPARGTMRRM 332
C GGFV*G PARGT RRM
Sbjct: 19 CHGGFV*GLPARGTTRRM 72
Score = 33.6 bits (67), Expect(3) = 4e-027
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +1 / +1
Query: 448 FREFLVCICNSK 483
FREFLVCICNSK
Sbjct: 187 FREFLVCICNSK 222
Score = 29.0 bits (57), Expect(2) = 2e-025
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = -3 / -3
Query: 487 RFCCCKYKLGTL* 449
+ CCCKYKL TL*
Sbjct: 226 KVCCCKYKLKTL* 188
Score = 21.7 bits (41), Expect(2) = 8e-023
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = +2 / +2
Query: 449 LESS*FVFATA 481
LES *FVFATA
Sbjct: 188 LESF*FVFATA 220
>gb|CF760723.1|CF760723 DSAF1_65_D03.b1_A011 Drought-stressed after flowering Sorghum
bicolor cDNA clone DSAF1_65_D03_A011 5', mRNA sequence
Length = 472
Score = 122 bits (260), Expect = 7e-027
Identities = 54/113 (47%), Positives = 68/113 (60%)
Frame = +2 / +2
Query: 38 RTRSRGDMSQGKGGASRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGT 217
R +++ + S EVVTR YTIN+HKRL FKK+AP AIKEIRKFA + MGT
Sbjct: 35 RIHKMAKLTRERKRKSAINEVVTRVYTINMHKRLLNIGFKKRAPRAIKEIRKFATQQMGT 214
Query: 218 TDVRIDVKLNKHIWSSGIXXXXXXXXXXXXXXXNDEEDAKEELYSLVTVAEIP 376
DVRID +LNK +WS GI ND+ED+ +LY+LVT +P
Sbjct: 215 QDVRIDTRLNKFVWSKGIRSVPFRIRVQLARRRNDDEDSPHKLYTLVTWVNVP 373
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 692,051,023
Number of Sequences: 832831
Number of extensions: 9387077
Number of successful extensions: 114153
Number of sequences better than 1.0e-020: 22
length of database: 163,786,556
effective HSP length: 53
effective length of database: 119,646,513
effective search space used: 17827330437
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)