TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 1716365.2.1
(936 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CN134750.1|CN134750 OX1_28_E12.b1_A002 Oxidatively-stres... 341 e-109
gb|CW353450.1|CW353450 fsbb001f016d09f0 Sorghum methylation... 331 e-106
gb|CW365891.1|CW365891 fsbb001f038k04k0 Sorghum methylation... 323 4e-091
gb|CW365890.1|CW365890 fsbb001f038k04f0 Sorghum methylation... 323 4e-091
gb|CF489387.1|CF489387 POL1_57_F11.b1_A002 Pollen Sorghum b... 311 1e-083
gb|BG103243.1|BG103243 RHIZ2_19_H12.g1_A003 Rhizome2 (RHIZ2... 304 1e-081
gb|CD209113.1|CD209113 HS1_46_A12.b1_A012 Heat-shocked seed... 291 1e-077
gb|CX606300.1|CX606300 ANR1_2_F08.b1_A002 Anaerobic roots S... 290 2e-077
gb|CF489555.1|CF489555 POL1_58_F10.b1_A002 Pollen Sorghum b... 283 3e-075
gb|CW363768.1|CW363768 fsbb001f035i09k0 Sorghum methylation... 271 9e-072
gb|BE597334.1|BE597334 PI1_72_B09.g1_A002 Pathogen induced ... 270 3e-071
gb|AW565318.1|AW565318 LG1_342_A06.g1_A002 Light Grown 1 (L... 268 1e-070
gb|CW403691.1|CW403691 fsbb001f095i13k0 Sorghum methylation... 253 7e-070
gb|CW176244.1|CW176244 104_589_11158384_148_36680_062 Sorgh... 261 1e-068
gb|CW105163.1|CW105163 104_474_11012772_116_34453_042 Sorgh... 253 4e-067
gb|CN149831.1|CN149831 WOUND1_65_D05.b1_A002 Wounded leaves... 253 4e-066
gb|BF705043.1|BF705043 RHIZ2_1_F10.g1_A003 Rhizome2 (RHIZ2)... 248 1e-064
gb|CN147521.1|CN147521 WOUND1_50_F12.b1_A002 Wounded leaves... 243 4e-063
gb|CW223651.1|CW223651 104_659_11203029_148_37186_085 Sorgh... 144 5e-063
gb|CW073807.1|CW073807 104_340_10781623_116_31470_103 Sorgh... 227 2e-058
gb|CW308233.1|CW308233 104_796_11468560_116_35731_054 Sorgh... 222 7e-057
gb|BG357481.1|BG357481 OV2_30_D12.g1_A002 Ovary 2 (OV2) Sor... 222 7e-057
gb|BE594970.1|BE594970 PI1_48_B08.g1_A002 Pathogen induced ... 221 9e-057
gb|BF422042.1|BF422042 FM1_12_C02.g1_A003 Floral-Induced Me... 221 1e-056
gb|AW923900.1|AW923900 WS1_30_E12.b1_A002 Water-stressed 1 ... 196 1e-055
gb|CF074385.1|CF074385 FE1_24_H07.b1_A002 Iron-deficient se... 214 2e-054
gb|CN126293.1|CN126293 RHOH1_16_G04.b1_A002 Acid- and alkal... 213 3e-054
gb|CN126382.1|CN126382 RHOH1_16_G04.g1_A002 Acid- and alkal... 211 1e-053
gb|CW311717.1|CW311717 104_801_11470377_116_36277_041 Sorgh... 148 1e-051
gb|CN147606.1|CN147606 WOUND1_50_F12.g1_A002 Wounded leaves... 190 4e-051
gb|CF485574.1|CF485574 POL1_32_G12.b1_A002 Pollen Sorghum b... 198 1e-049
gb|CX613644.1|CX613644 GABR1_9_H06.b1_A002 GA- or brassinol... 195 7e-049
gb|BF480784.1|BF480784 FM1_14_H09.g1_A003 Floral-Induced Me... 194 1e-048
gb|CD427064.1|CD427064 SA1_17_G05.b1_A002 Salicylic acid-tr... 191 2e-047
gb|CD423436.1|CD423436 SA1_23_C04.b1_A002 Salicylic acid-tr... 190 3e-047
gb|BG052508.1|BG052508 RHIZ2_26_A04.g1_A003 Rhizome2 (RHIZ2... 189 6e-047
gb|CW403690.1|CW403690 fsbb001f095i13f0 Sorghum methylation... 158 7e-046
gb|BE596005.1|BE596005 PI1_51_B03.g1_A002 Pathogen induced ... 182 9e-045
gb|BM329541.1|BM329541 PIC1_39_D08.g1_A002 Pathogen-infecte... 182 9e-045
gb|CD462204.1|CD462204 SA1_40_B09.b1_A002 Salicylic acid-tr... 182 9e-045
gb|CW088288.1|CW088288 104_433_10948097_114_32572_075 Sorgh... 122 8e-044
gb|CW088290.1|CW088290 104_433_10948097_250_32620_075 Sorgh... 122 8e-044
gb|AW679681.1|AW679681 WS1_30_E12.g1_A002 Water-stressed 1 ... 176 6e-043
gb|BG053517.1|BG053517 RHIZ2_10_B08.g1_A003 Rhizome2 (RHIZ2... 173 4e-042
gb|CW280288.1|CW280288 104_755_11407540_148_35446_008 Sorgh... 167 2e-040
gb|CW363767.1|CW363767 fsbb001f035i09f0 Sorghum methylation... 163 4e-039
gb|CW368244.1|CW368244 fsbb001f042b22k0 Sorghum methylation... 163 4e-039
gb|BM330114.1|BM330114 PIC1_47_C12.g1_A002 Pathogen-infecte... 157 3e-037
gb|CW430454.1|CW430454 fsbb001f144c20f0 Sorghum methylation... 154 2e-036
gb|BM329226.1|BM329226 PIC1_35_A07.g1_A002 Pathogen-infecte... 150 3e-035
gb|BM331672.1|BM331672 PIC1_59_C05.g1_A002 Pathogen-infecte... 150 3e-035
gb|CW034726.1|CW034726 104_265_10502729_114_30378 Sorghum m... 148 1e-034
gb|AW671681.1|AW671681 LG1_349_E04.b1_A002 Light Grown 1 (L... 147 2e-034
gb|CW038426.1|CW038426 104_270_10504920_115_30386 Sorghum m... 89 1e-033
gb|BE362057.1|BE362057 DG1_84_G12.b1_A002 Dark Grown 1 (DG1... 142 7e-033
gb|CD236116.1|CD236116 SS1_32_H04.b1_A012 Salt-stressed see... 141 1e-032
gb|CW111205.1|CW111205 104_484_11104174_148_34528_089 Sorgh... 135 8e-031
gb|CW492772.1|CW492772 fsbb001f283d16k0 Sorghum methylation... 131 2e-029
gb|CW311718.1|CW311718 104_801_11470377_148_36278_041 Sorgh... 129 7e-029
gb|CW308234.1|CW308234 104_796_11468560_148_35739_054 Sorgh... 128 1e-028
gb|CW270918.1|CW270918 104_742_11402708_148_35335_066 Sorgh... 118 2e-028
gb|CW310536.1|CW310536 104_799_11469765_116_37434_083 Sorgh... 127 2e-028
gb|CW105164.1|CW105164 104_474_11012772_148_34449_042 Sorgh... 123 4e-027
gb|CW183962.1|CW183962 104_600_11164896_148_36687_096 Sorgh... 122 1e-026
gb|AZ922789.1|AZ922789 SLCot4E02 Sorghum bicolor SLCot Sorg... 108 2e-026
gb|BM329963.1|BM329963 PIC1_45_E03.g1_A002 Pathogen-infecte... 120 4e-026
gb|CW441737.1|CW441737 fsbb001f161a13f0 Sorghum methylation... 119 7e-026
gb|BM328737.1|BM328737 PIC1_26_A01.g1_A002 Pathogen-infecte... 119 7e-026
gb|CW151320.1|CW151320 104_552_11143873_148_36316_013 Sorgh... 96 7e-024
gb|CW143027.1|CW143027 104_534_11137188_148_34947_038 Sorgh... 109 6e-023
gb|CF486256.1|CF486256 POL1_36_E02.g1_A002 Pollen Sorghum b... 106 4e-022
gb|CW501464.1|CW501464 fsbb001f297e18f0 Sorghum methylation... 96 7e-022
gb|CW328501.1|CW328501 104_824_11479337_116_35987_069 Sorgh... 96 7e-022
gb|BM325667.1|BM325667 PIC1_47_C12.b1_A002 Pathogen-infecte... 95 5e-021
gb|CW378681.1|CW378681 fsbb001f057i24f0 Sorghum methylation... 102 7e-021
gb|CW491307.1|CW491307 fsbb001f281b24f0 Sorghum methylation... 96 9e-021
>gb|CN134750.1|CN134750 OX1_28_E12.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_28_E12_A002 3', mRNA sequence
Length = 842
Score = 341 bits (740), Expect(2) = e-109
Identities = 133/147 (90%), Positives = 142/147 (96%)
Frame = -3 / +1
Query: 772 LANQVRPLPELVAEPTDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGK 593
+ NQV PLPEL+AEPTDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGK
Sbjct: 181 IVNQVSPLPELIAEPTDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGK 360
Query: 592 TPFKGSGNRATLFNVVGQPLRFPESPVVSFAARDLIRGLLIKEPQHRLAYKRGATEIKQH 413
TPFKGSGNRATLFNVVGQPLRFPESP+VSF+ARDLIRGLL+K+PQHRL YKRG TEIKQH
Sbjct: 361 TPFKGSGNRATLFNVVGQPLRFPESPIVSFSARDLIRGLLVKDPQHRLGYKRGTTEIKQH 540
Query: 412 PFFEGVNWALIRCATPPDIPKPVEIPR 332
PFFEGVNWALIRCA+PPD+PKPVE+ R
Sbjct: 541 PFFEGVNWALIRCASPPDVPKPVELDR 621
Score = 223 bits (481), Expect(2) = 6e-065
Identities = 94/128 (73%), Positives = 102/128 (79%)
Frame = +3 / -1
Query: 333 RGISTGLGISGGVAHLINAQLTPSKNGCCFISVAPRLYANRC*GSLMSNPLIRSLAAKLT 512
R STG G SGG+AH INAQ TPSKNGCC ISV PRL RC GSL SNPLI+SLA KLT
Sbjct: 620 RSSSTGFGTSGGLAHRINAQFTPSKNGCCLISVVPRL*PRRCCGSLTSNPLIKSLAEKLT 441
Query: 513 TGDSGNLKGCPTTLNNVALFPEPLNGVLPKRSSYKNMPNVHQSTALPCPSPFIISGAKYS 692
GDSGN +G PTTL +VA FP+PL GVLP RSS +N+P VHQSTALP PSP IISGAKYS
Sbjct: 440 IGDSGNRRG*PTTLKSVARFPDPLKGVLPNRSS*RNIPKVHQSTALPWPSPLIISGAKYS 261
Query: 693 WVPTKDID 716
WVPT DI+
Sbjct: 260 WVPTNDIE 237
Score = 123 bits (263), Expect(2) = 2e-033
Identities = 62/142 (43%), Positives = 88/142 (61%)
Frame = +2 / -3
Query: 341 LNWLGDIRWSGTPD*CPINTFKERVLFYFCGSTLIR*SMLRFLDEQSPNKIPCSKTHYR* 520
L+ L IR + TP+ PI+T KERVL + + +MLR D+QS ++P +TH
Sbjct: 612 LDRLWYIRRACTPNQRPIHTLKERVLLDLSSPSFVAKTMLRVFDQQSSYQVPS*ETHNWG 433
Query: 521 FWEP*GLSNYVEQCRPIPRTFEWCLAEEKLIQEYAKCPPVYSTSMPLALYNFRCQVLMGA 700
WEP GL+N +E+C P+ E L + +LI+EY K PP++ST+M +L F QVLMGA
Sbjct: 432 LWEPKGLTNNIEECSPVS*PLERGLTK*ELIKEYTKGPPIHSTAMAFSLDYFWRQVLMGA 253
Query: 701 NKRHRPCICRLCNKLRKWSDLI 766
NK HR I L N+LR+ + L+
Sbjct: 252 NK*HRASIGWLRNELRQRAHLV 187
Score = 114 bits (243), Expect(3) = 3e-029
Identities = 55/129 (42%), Positives = 76/129 (58%)
Frame = -2 / +3
Query: 758 QTTS*ACCRADRCKVYVFCWHP*VLGT*NYKGRGAWKCCRLVDIWHILV*ASLRQDTIQR 579
+ +*A C A+RC +YV CWHP*VLG N +GR W+CC LVD+W+I +*A + D Q
Sbjct: 195 EPAA*AHCGANRCSLYVICWHP*VLGARNNQGRRPWQCCGLVDLWYIPL*APIW*DPFQG 374
Query: 578 FWE*GDIVQRSWTTLKVPRITCSEFCCKGSY*GIAHQGTSASISV*AWSHRNKTAPVL*R 399
+ G +Q W+ VPR+ EF G IA Q +AS + + ++ APVL*
Sbjct: 375 VRKPGYTLQCCWSAPSVPRVPNCEFLS*GLDKRIAGQRPAASSWLQTRDY*DQAAPVL*G 554
Query: 398 C*LGINQVC 372
C LG++ VC
Sbjct: 555 CELGVDSVC 581
Score = 75.3 bits (158), Expect(2) = e-109
Identities = 25/35 (71%), Positives = 29/35 (82%)
Frame = -3 / +1
Query: 922 QKGNPAYCVQPVCIEPACMQPSCVTTTTCFSPRFF 818
Q+ N AYCVQP CIEP+C+QP+CV TTCF PRFF
Sbjct: 25 QRSNQAYCVQPTCIEPSCIQPACVAPTTCFGPRFF 129
Score = 46.4 bits (95), Expect(2) = 6e-065
Identities = 22/36 (61%), Positives = 24/36 (66%)
Frame = +3 / -1
Query: 807 DLEEKKRGEKHVVVVTQEGCIQAGSMHTGCTQ*AGL 914
DLEEKKRG KHVV T G +Q GS+ G TQ A L
Sbjct: 140 DLEEKKRGPKHVVGATHAGWMQDGSIQVG*TQYAWL 33
Score = 40.9 bits (83), Expect(2) = 2e-033
Identities = 17/37 (45%), Positives = 22/37 (59%)
Frame = +1 / -2
Query: 805 WIWKRKSEERSMWLS*HKKAAYRQAQCTQAAHSKLGC 915
WIW+RK+ ++S L H A R A+ A HS LGC
Sbjct: 142 WIWRRKNGDQST*LEQHMPAGCRMARYK*AEHSMLGC 32
Score = 29.9 bits (59), Expect(3) = 3e-029
Identities = 7/15 (46%), Positives = 12/15 (80%)
Frame = -3 / +1
Query: 895 QPVCIEPACMQPSCV 851
Q C++P C++PSC+
Sbjct: 37 QAYCVQPTCIEPSCI 81
Score = 24.0 bits (46), Expect(3) = 3e-029
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -2 / +3
Query: 857 LCHDNHMLLSSLFLFQIQ 804
+C N++L S FL QIQ
Sbjct: 90 MCCSNYVLWSPFFLLQIQ 143
>gb|CW353450.1|CW353450 fsbb001f016d09f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f016d09, DNA
sequence
Length = 730
Score = 331 bits (718), Expect(2) = e-106
Identities = 130/143 (90%), Positives = 138/143 (96%)
Frame = -3 / +3
Query: 766 NQVRPLPELVAEPTDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTP 587
NQ PEL+AEPTDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTP
Sbjct: 237 NQENLFPELIAEPTDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTP 416
Query: 586 FKGSGNRATLFNVVGQPLRFPESPVVSFAARDLIRGLLIKEPQHRLAYKRGATEIKQHPF 407
FKGSGNRATLFNVVGQPLRFPESP+VSF+ARD+IRGLL+K+PQHRL YKRGATEIKQHPF
Sbjct: 417 FKGSGNRATLFNVVGQPLRFPESPIVSFSARDMIRGLLVKDPQHRLGYKRGATEIKQHPF 596
Query: 406 FEGVNWALIRCATPPDIPKPVEI 338
FEGVNWALIRCA+PPDIPKPVE+
Sbjct: 597 FEGVNWALIRCASPPDIPKPVEL 665
Score = 243 bits (525), Expect(2) = 2e-069
Identities = 100/125 (80%), Positives = 107/125 (85%)
Frame = +3 / -1
Query: 342 STGLGISGGVAHLINAQLTPSKNGCCFISVAPRLYANRC*GSLMSNPLIRSLAAKLTTGD 521
STG G+SGG+AHL+ AQ TPSK GCCFISVAPRLY +RC GSL SNPLI SLA KLT GD
Sbjct: 661 STGFGMSGGLAHLMRAQFTPSKKGCCFISVAPRLYPSRCCGSLTSNPLIMSLAEKLTIGD 482
Query: 522 SGNLKGCPTTLNNVALFPEPLNGVLPKRSSYKNMPNVHQSTALPCPSPFIISGAKYSWVP 701
SGNLKG PTTL +VA PEPLNGVLP +SYKNMP VHQSTALP PSPFIISGAKYSWVP
Sbjct: 481 SGNLKGWPTTLKSVARLPEPLNGVLPNNNSYKNMPKVHQSTALPWPSPFIISGAKYSWVP 302
Query: 702 TKDID 716
TKDI+
Sbjct: 301 TKDIE 287
Score = 135 bits (289), Expect(2) = 6e-035
Identities = 65/136 (47%), Positives = 87/136 (63%)
Frame = +2 / -3
Query: 338 DLNWLGDIRWSGTPD*CPINTFKERVLFYFCGSTLIR*SMLRFLDEQSPNKIPCSKTHYR 517
+LN L + + P P++T KER+L Y +TL+ S+LR LD QSP +P + H
Sbjct: 665 ELNRLWYVWRACAPYESPVHTLKERMLLYLGSTTLVPKSVLRVLD*QSPYHVPRREAHNW 486
Query: 518 *FWEP*GLSNYVEQCRPIPRTFEWCLAEEKLIQEYAKCPPVYSTSMPLALYNFRCQVLMG 697
WEP GL++ VE+C P+ TFE LA+++L+QEYAK PP++STSM L Y F QVLMG
Sbjct: 485 GLWEPQGLAHNVEECSPVA*TFERGLAKQQLVQEYAKGPPIHSTSMALPFYYFWGQVLMG 306
Query: 698 ANKRHRPCICRLCNKL 745
ANK H I L N+L
Sbjct: 305 ANKGH*ASISWLSNEL 258
Score = 130 bits (279), Expect(2) = 2e-032
Identities = 60/123 (48%), Positives = 75/123 (60%)
Frame = -2 / +2
Query: 743 ACCRADRCKVYVFCWHP*VLGT*NYKGRGAWKCCRLVDIWHILV*ASLRQDTIQRFWE*G 564
A C A+ C + V CWHP*VLG N K G WKCC LVD+WHILV + QD +QRF + G
Sbjct: 260 AHC*AN*CSLNVLCWHP*VLGPRNNKRGGPWKCCGLVDLWHILVRVVVWQDPVQRFRQPG 439
Query: 563 DIVQRSWTTLKVPRITCSEFCCKGSY*GIAHQGTSASISV*AWSHRNKTAPVL*RC*LGI 384
+QR L+VPR+ E C+G GIA QG +A V AW +R+K L* C LG
Sbjct: 440 YTLQRCGPALEVPRVPNCELLCEGHDKGIASQGPAAPTWVQAWCYRDKATSFL*GCELGS 619
Query: 383 NQV 375
++V
Sbjct: 620 HKV 628
Score = 74.8 bits (157), Expect(2) = e-106
Identities = 25/35 (71%), Positives = 28/35 (80%)
Frame = -3 / +3
Query: 922 QKGNPAYCVQPVCIEPACMQPSCVTTTTCFSPRFF 818
Q+ N AYC QP CIEP+C+QPSCV TTCF PRFF
Sbjct: 72 QRNNAAYCAQPACIEPSCIQPSCVAPTTCFGPRFF 176
Score = 41.4 bits (84), Expect(2) = 2e-069
Identities = 21/42 (50%), Positives = 25/42 (59%)
Frame = +3 / -1
Query: 807 DLEEKKRGEKHVVVVTQEGCIQAGSMHTGCTQ*AGLPFWLSS 932
DL+ K RG K VV TQEG +Q GSM G Q A L ++S
Sbjct: 187 DLDLKNRGPKQVVGATQEG*MQDGSMQAGWAQYAALFLCIAS 62
Score = 34.1 bits (68), Expect(2) = 6e-035
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = +1 / -2
Query: 805 WIWKRKSEERSMWLS*HKKAAYRQAQCTQAAHSKLGC 915
WI ++ +S L HK+A R QC QA HS L C
Sbjct: 189 WI*I*RTGGQSK*LELHKRAECRMVQCKQAGHSMLHC 79
Score = 29.9 bits (59), Expect(2) = 2e-032
Identities = 7/15 (46%), Positives = 13/15 (86%)
Frame = -3 / +3
Query: 901 CVQPVCIEPACMQPS 857
C++P CI+P+C+ P+
Sbjct: 108 CIEPSCIQPSCVAPT 152
>gb|CW365891.1|CW365891 fsbb001f038k04k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f038k04, DNA
sequence
Length = 693
Score = 323 bits (700), Expect(2) = 4e-091
Identities = 128/165 (77%), Positives = 143/165 (86%)
Frame = -3 / -2
Query: 772 LANQVRPLPELVAEPTDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGK 593
+ NQV P PEL+AEP+DARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGK
Sbjct: 578 VVNQVSPWPELIAEPSDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGK 399
Query: 592 TPFKGSGNRATLFNVVGQPLRFPESPVVSFAARDLIRGLLIKEPQHRLAYKRGATEIKQH 413
TPFKG+GNRATLFNV+GQPLRFPE PVVSF ARDLIR LL+KEPQ RL +KRGATEIKQH
Sbjct: 398 TPFKGTGNRATLFNVIGQPLRFPEYPVVSFPARDLIRSLLVKEPQQRLGFKRGATEIKQH 219
Query: 412 PFFEGVNWALIRCATPPDIPKPVEIPRSVASSSQKATSAAEKGSD 278
PFFEGVNWALIRCA+PP++P+ +I + + SAA+ G D
Sbjct: 218 PFFEGVNWALIRCASPPEVPRHFDIEKPPKQPVSTSESAAQNGGD 84
Score = 209 bits (450), Expect(2) = 2e-054
Identities = 92/126 (73%), Positives = 98/126 (77%)
Frame = +3 / +1
Query: 339 ISTGLGISGGVAHLINAQLTPSKNGCCFISVAPRLYANRC*GSLMSNPLIRSLAAKLTTG 518
+S LG SGG+A INAQ TPSKNGCCFISVAPRL NRC GSL LI+SLA KLTTG
Sbjct: 145 MSKCLGTSGGLAQRINAQFTPSKNGCCFISVAPRLKPNRCWGSLTRRLLIKSLAGKLTTG 324
Query: 519 DSGNLKGCPTTLNNVALFPEPLNGVLPKRSSYKNMPNVHQSTALPCPSPFIISGAKYSWV 698
SG KG P TLN+VA FP PLNGV P RSSY+N+P VHQSTALP PSP IISGAKYS V
Sbjct: 325 YSGKRKG*PMTLNSVARFPVPLNGVFPNRSSYRNIPKVHQSTALP*PSPLIISGAKYSCV 504
Query: 699 PTKDID 716
PT DID
Sbjct: 505 PTNDID 522
Score = 151 bits (324), Expect = 2e-035
Identities = 64/127 (50%), Positives = 82/127 (64%)
Frame = +2 / +3
Query: 386 CPINTFKERVLFYFCGSTLIR*SMLRFLDEQSPNKIPCSKTHYR*FWEP*GLSNYVEQCR 565
CP++T K+ VLFY G+TL S+L D+++ IP + H F E GL+N +EQCR
Sbjct: 192 CPVHTLKKWVLFYLGGTTLKTQSLLGLFDQETSY*IPSWEAHNWIFRETQGLTNDIEQCR 371
Query: 566 PIPRTFEWCLAEEKLIQEYAKCPPVYSTSMPLALYNFRCQVLMGANKRHRPCICRLCNKL 745
P+PR FEWC +++LI EY K PPV ST+M L N CQVLM NK HR CI R C KL
Sbjct: 372 PVPRAFEWCFPKQELI*EYTKGPPVNSTTMTLTFDNLGCQVLMCTNK*HRSCITRFCYKL 551
Query: 746 RKWSDLI 766
R W+ L+
Sbjct: 552 RPWAHLV 572
Score = 86.3 bits (182), Expect(4) = 2e-028
Identities = 39/85 (45%), Positives = 54/85 (63%)
Frame = -2 / -1
Query: 761 GQTTS*ACCRADRCKVYVFCWHP*VLGT*NYKGRGAWKCCRLVDIWHILV*ASLRQDTIQ 582
G+ +*A R C + V CW+ *VLGT +Y+ G+W CC LVD+W+I +*A + ++TIQ
Sbjct: 567 GEPMA*AYSRT**CTIDVICWYT*VLGTRDYQR*GSW*CC*LVDLWYIPI*APVWENTIQ 388
Query: 581 RFWE*GDIVQRSWTTLKVPRITCSE 507
R E GD VQ W+ L P I+ E
Sbjct: 387 RHGEPGDTVQCHWSALAFP*ISSCE 313
Score = 45.1 bits (92), Expect(4) = 2e-028
Identities = 18/36 (50%), Positives = 24/36 (66%)
Frame = -2 / -1
Query: 470 QGTSASISV*AWSHRNKTAPVL*RC*LGINQVCHST 363
Q +I *AW HR+KTAP+ * C LGI+ +C S+
Sbjct: 276 QRAPTTIGF*AWCHRDKTAPIF*GCELGIDTLCESS 169
Score = 33.6 bits (67), Expect(2) = 4e-091
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = -3 / -2
Query: 868 MQPSCVTTTTCFSPRFF 818
MQPSC T CF PR F
Sbjct: 665 MQPSCTAPTACFGPRLF 615
Score = 28.6 bits (56), Expect(4) = 2e-028
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = -3 / -2
Query: 874 ACMQPSCVTTTTCFSP 827
AC+QPSCV +C +P
Sbjct: 689 ACVQPSCVMQPSCTAP 642
Score = 25.8 bits (50), Expect(2) = 2e-054
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = +3 / +1
Query: 816 EKKRGEKHVVVVTQEGCI 869
E RG KH V +GCI
Sbjct: 613 ENSRGPKHAVGAVHDGCI 666
Score = 22.6 bits (43), Expect(4) = 2e-028
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -3 / -2
Query: 316 SQKATSAAEKGSDYLELEFF*WSR 245
S ++A G +YLE FF* +R
Sbjct: 119 STSESAAQNGGDNYLEFGFF*GNR 48
>gb|CW365890.1|CW365890 fsbb001f038k04f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f038k04, DNA
sequence
Length = 678
Score = 323 bits (700), Expect(2) = 4e-091
Identities = 128/165 (77%), Positives = 143/165 (86%)
Frame = -3 / +2
Query: 772 LANQVRPLPELVAEPTDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGK 593
+ NQV P PEL+AEP+DARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGK
Sbjct: 113 VVNQVSPWPELIAEPSDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGK 292
Query: 592 TPFKGSGNRATLFNVVGQPLRFPESPVVSFAARDLIRGLLIKEPQHRLAYKRGATEIKQH 413
TPFKG+GNRATLFNV+GQPLRFPE PVVSF ARDLIR LL+KEPQ RL +KRGATEIKQH
Sbjct: 293 TPFKGTGNRATLFNVIGQPLRFPEYPVVSFPARDLIRSLLVKEPQQRLGFKRGATEIKQH 472
Query: 412 PFFEGVNWALIRCATPPDIPKPVEIPRSVASSSQKATSAAEKGSD 278
PFFEGVNWALIRCA+PP++P+ +I + + SAA+ G D
Sbjct: 473 PFFEGVNWALIRCASPPEVPRHFDIEKPPKQPVSTSESAAQNGGD 607
Score = 209 bits (450), Expect(2) = 2e-054
Identities = 92/126 (73%), Positives = 98/126 (77%)
Frame = +3 / -1
Query: 339 ISTGLGISGGVAHLINAQLTPSKNGCCFISVAPRLYANRC*GSLMSNPLIRSLAAKLTTG 518
+S LG SGG+A INAQ TPSKNGCCFISVAPRL NRC GSL LI+SLA KLTTG
Sbjct: 546 MSKCLGTSGGLAQRINAQFTPSKNGCCFISVAPRLKPNRCWGSLTRRLLIKSLAGKLTTG 367
Query: 519 DSGNLKGCPTTLNNVALFPEPLNGVLPKRSSYKNMPNVHQSTALPCPSPFIISGAKYSWV 698
SG KG P TLN+VA FP PLNGV P RSSY+N+P VHQSTALP PSP IISGAKYS V
Sbjct: 366 YSGKRKG*PMTLNSVARFPVPLNGVFPNRSSYRNIPKVHQSTALP*PSPLIISGAKYSCV 187
Query: 699 PTKDID 716
PT DID
Sbjct: 186 PTNDID 169
Score = 151 bits (324), Expect = 2e-035
Identities = 64/127 (50%), Positives = 82/127 (64%)
Frame = +2 / -3
Query: 386 CPINTFKERVLFYFCGSTLIR*SMLRFLDEQSPNKIPCSKTHYR*FWEP*GLSNYVEQCR 565
CP++T K+ VLFY G+TL S+L D+++ IP + H F E GL+N +EQCR
Sbjct: 499 CPVHTLKKWVLFYLGGTTLKTQSLLGLFDQETSY*IPSWEAHNWIFRETQGLTNDIEQCR 320
Query: 566 PIPRTFEWCLAEEKLIQEYAKCPPVYSTSMPLALYNFRCQVLMGANKRHRPCICRLCNKL 745
P+PR FEWC +++LI EY K PPV ST+M L N CQVLM NK HR CI R C KL
Sbjct: 319 PVPRAFEWCFPKQELI*EYTKGPPVNSTTMTLTFDNLGCQVLMCTNK*HRSCITRFCYKL 140
Query: 746 RKWSDLI 766
R W+ L+
Sbjct: 139 RPWAHLV 119
Score = 86.3 bits (182), Expect(4) = 2e-028
Identities = 39/85 (45%), Positives = 54/85 (63%)
Frame = -2 / +1
Query: 761 GQTTS*ACCRADRCKVYVFCWHP*VLGT*NYKGRGAWKCCRLVDIWHILV*ASLRQDTIQ 582
G+ +*A R C + V CW+ *VLGT +Y+ G+W CC LVD+W+I +*A + ++TIQ
Sbjct: 124 GEPMA*AYSRT**CTIDVICWYT*VLGTRDYQR*GSW*CC*LVDLWYIPI*APVWENTIQ 303
Query: 581 RFWE*GDIVQRSWTTLKVPRITCSE 507
R E GD VQ W+ L P I+ E
Sbjct: 304 RHGEPGDTVQCHWSALAFP*ISSCE 378
Score = 45.1 bits (92), Expect(4) = 2e-028
Identities = 18/36 (50%), Positives = 24/36 (66%)
Frame = -2 / +1
Query: 470 QGTSASISV*AWSHRNKTAPVL*RC*LGINQVCHST 363
Q +I *AW HR+KTAP+ * C LGI+ +C S+
Sbjct: 415 QRAPTTIGF*AWCHRDKTAPIF*GCELGIDTLCESS 522
Score = 33.6 bits (67), Expect(2) = 4e-091
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = -3 / +2
Query: 868 MQPSCVTTTTCFSPRFF 818
MQPSC T CF PR F
Sbjct: 26 MQPSCTAPTACFGPRLF 76
Score = 28.6 bits (56), Expect(4) = 2e-028
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = -3 / +2
Query: 874 ACMQPSCVTTTTCFSP 827
AC+QPSCV +C +P
Sbjct: 2 ACVQPSCVMQPSCTAP 49
Score = 25.8 bits (50), Expect(2) = 2e-054
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = +3 / -1
Query: 816 EKKRGEKHVVVVTQEGCI 869
E RG KH V +GCI
Sbjct: 78 ENSRGPKHAVGAVHDGCI 25
Score = 22.6 bits (43), Expect(4) = 2e-028
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -3 / +2
Query: 316 SQKATSAAEKGSDYLELEFF*WSR 245
S ++A G +YLE FF* +R
Sbjct: 572 STSESAAQNGGDNYLEFGFF*GNR 643
>gb|CF489387.1|CF489387 POL1_57_F11.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_57_F11_A002 3', mRNA sequence
Length = 712
Score = 311 bits (673), Expect = 1e-083
Identities = 123/156 (78%), Positives = 137/156 (87%)
Frame = -3 / +2
Query: 745 ELVAEPTDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNR 566
EL+AEP+DARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKG+GNR
Sbjct: 2 ELIAEPSDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGTGNR 181
Query: 565 ATLFNVVGQPLRFPESPVVSFAARDLIRGLLIKEPQHRLAYKRGATEIKQHPFFEGVNWA 386
ATLFNV+GQPLRFPE PVVSF ARDLIR LL+KEPQ RL +KRGATEIKQHPFFEGVNWA
Sbjct: 182 ATLFNVIGQPLRFPEYPVVSFPARDLIRSLLVKEPQQRLGFKRGATEIKQHPFFEGVNWA 361
Query: 385 LIRCATPPDIPKPVEIPRSVASSSQKATSAAEKGSD 278
LIRCA+PP++P+ +I + + SAA+ G D
Sbjct: 362 LIRCASPPEVPRHFDIEKPPKQPVSTSESAAQNGGD 469
Score = 209 bits (450), Expect = 7e-053
Identities = 92/126 (73%), Positives = 98/126 (77%)
Frame = +3 / -2
Query: 339 ISTGLGISGGVAHLINAQLTPSKNGCCFISVAPRLYANRC*GSLMSNPLIRSLAAKLTTG 518
+S LG SGG+A INAQ TPSKNGCCFISVAPRL NRC GSL LI+SLA KLTTG
Sbjct: 408 MSKCLGTSGGLAQRINAQFTPSKNGCCFISVAPRLKPNRCWGSLTRRLLIKSLAGKLTTG 229
Query: 519 DSGNLKGCPTTLNNVALFPEPLNGVLPKRSSYKNMPNVHQSTALPCPSPFIISGAKYSWV 698
SG KG P TLN+VA FP PLNGV P RSSY+N+P VHQSTALP PSP IISGAKYS V
Sbjct: 228 YSGKRKG*PMTLNSVARFPVPLNGVFPNRSSYRNIPKVHQSTALP*PSPLIISGAKYSCV 49
Query: 699 PTKDID 716
PT DID
Sbjct: 48 PTNDID 31
Score = 141 bits (302), Expect = 2e-032
Identities = 61/120 (50%), Positives = 77/120 (64%)
Frame = +2 / -1
Query: 386 CPINTFKERVLFYFCGSTLIR*SMLRFLDEQSPNKIPCSKTHYR*FWEP*GLSNYVEQCR 565
CP++T K+ VLFY G+TL S+L D+++ IP + H F E GL+N +EQCR
Sbjct: 361 CPVHTLKKWVLFYLGGTTLKTQSLLGLFDQETSY*IPSWEAHNWIFRETQGLTNDIEQCR 182
Query: 566 PIPRTFEWCLAEEKLIQEYAKCPPVYSTSMPLALYNFRCQVLMGANKRHRPCICRLCNKL 745
P+PR FEWC +++LI EY K PPV ST+M L N CQVLM NK HR CI R C KL
Sbjct: 181 PVPRAFEWCFPKQELI*EYTKGPPVNSTTMTLTFDNLGCQVLMCTNK*HRSCITRFCYKL 2
Score = 83.5 bits (176), Expect(3) = 3e-024
Identities = 35/72 (48%), Positives = 48/72 (66%)
Frame = -2 / +1
Query: 722 CKVYVFCWHP*VLGT*NYKGRGAWKCCRLVDIWHILV*ASLRQDTIQRFWE*GDIVQRSW 543
C + V CW+ *VLGT +Y+ G+W CC LVD+W+I +*A + ++TIQR E GD VQ W
Sbjct: 25 CTIDVICWYT*VLGTRDYQR*GSW*CC*LVDLWYIPI*APVWENTIQRHGEPGDTVQCHW 204
Query: 542 TTLKVPRITCSE 507
+ L P I+ E
Sbjct: 205 SALAFP*ISSCE 240
Score = 45.1 bits (92), Expect(3) = 3e-024
Identities = 18/36 (50%), Positives = 24/36 (66%)
Frame = -2 / +1
Query: 470 QGTSASISV*AWSHRNKTAPVL*RC*LGINQVCHST 363
Q +I *AW HR+KTAP+ * C LGI+ +C S+
Sbjct: 277 QRAPTTIGF*AWCHRDKTAPIF*GCELGIDTLCESS 384
Score = 22.6 bits (43), Expect(3) = 3e-024
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -3 / +2
Query: 316 SQKATSAAEKGSDYLELEFF*WSR 245
S ++A G +YLE FF* +R
Sbjct: 434 STSESAAQNGGDNYLEFGFF*GNR 505
>gb|BG103243.1|BG103243 RHIZ2_19_H12.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 691
Score = 304 bits (658), Expect = 1e-081
Identities = 123/162 (75%), Positives = 136/162 (83%)
Frame = -3 / +1
Query: 772 LANQVRPLPELVAEPTDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGK 593
L LPELVAEPT ARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFL+ELL+GK
Sbjct: 13 LGQNAGTLPELVAEPTSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGK 192
Query: 592 TPFKGSGNRATLFNVVGQPLRFPESPVVSFAARDLIRGLLIKEPQHRLAYKRGATEIKQH 413
TPFKGSGNRATLFNVVGQ L+FPESP S+++RDLIRGLL+KEPQ RL KRGATEIKQH
Sbjct: 193 TPFKGSGNRATLFNVVGQQLKFPESPSTSYSSRDLIRGLLVKEPQSRLGVKRGATEIKQH 372
Query: 412 PFFEGVNWALIRCATPPDIPKPVEIPRSVASSSQKATSAAEK 287
PFFEGVNWALIRC+TPP++P+PVE V +A + K
Sbjct: 373 PFFEGVNWALIRCSTPPEVPRPVEAELPVKYGVAEAIGSNSK 498
Score = 197 bits (424), Expect = 3e-049
Identities = 86/130 (66%), Positives = 93/130 (71%)
Frame = +3 / -3
Query: 327 TERGISTGLGISGGVAHLINAQLTPSKNGCCFISVAPRLYANRC*GSLMSNPLIRSLAAK 506
T STGLG SGGV H + AQ TPSK GCC ISVAPR R GSL +PL+RSL
Sbjct: 458 TGSSASTGLGTSGGVLHRMRAQFTPSKKGCCLISVAPRFTPRRLCGSLTRSPLMRSLLE* 279
Query: 507 LTTGDSGNLKGCPTTLNNVALFPEPLNGVLPKRSSYKNMPNVHQSTALPCPSPFIISGAK 686
L GDSGN PTTLN VA FP+PLNGVLP SS++ MP VHQSTALPCPSP +ISGAK
Sbjct: 278 LVDGDSGNFSC*PTTLNRVARFPDPLNGVLPYSSSWRKMPKVHQSTALPCPSPLMISGAK 99
Query: 687 YSWVPTKDID 716
YS VPT DID
Sbjct: 98 YS*VPTNDID 69
>gb|CD209113.1|CD209113 HS1_46_A12.b1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_46_A12_A012 3', mRNA sequence
Length = 651
Score = 291 bits (629), Expect = 1e-077
Identities = 116/149 (77%), Positives = 129/149 (86%)
Frame = -3 / +1
Query: 733 EPTDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLF 554
EPT ARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFL+ELL+GKTPFKGSGNRATLF
Sbjct: 1 EPTSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLF 180
Query: 553 NVVGQPLRFPESPVVSFAARDLIRGLLIKEPQHRLAYKRGATEIKQHPFFEGVNWALIRC 374
NVVGQ L+FPESP S+++RDLIRGLL+KEPQ RL KRGATEIKQHPFFEGVNWALIRC
Sbjct: 181 NVVGQQLKFPESPSTSYSSRDLIRGLLVKEPQSRLGVKRGATEIKQHPFFEGVNWALIRC 360
Query: 373 ATPPDIPKPVEIPRSVASSSQKATSAAEK 287
+TPP++P+PVE V +A + K
Sbjct: 361 STPPEVPRPVEAELPVKYGVAEAIGSNSK 447
Score = 197 bits (424), Expect = 3e-049
Identities = 86/130 (66%), Positives = 93/130 (71%)
Frame = +3 / -2
Query: 327 TERGISTGLGISGGVAHLINAQLTPSKNGCCFISVAPRLYANRC*GSLMSNPLIRSLAAK 506
T STGLG SGGV H + AQ TPSK GCC ISVAPR R GSL +PL+RSL
Sbjct: 407 TGSSASTGLGTSGGVLHRMRAQFTPSKKGCCLISVAPRFTPRRLCGSLTRSPLMRSLLE* 228
Query: 507 LTTGDSGNLKGCPTTLNNVALFPEPLNGVLPKRSSYKNMPNVHQSTALPCPSPFIISGAK 686
L GDSGN PTTLN VA FP+PLNGVLP SS++ MP VHQSTALPCPSP +ISGAK
Sbjct: 227 LVDGDSGNFSC*PTTLNRVARFPDPLNGVLPYSSSWRKMPKVHQSTALPCPSPLMISGAK 48
Query: 687 YSWVPTKDID 716
YS VPT DID
Sbjct: 47 YS*VPTNDID 18
>gb|CX606300.1|CX606300 ANR1_2_F08.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_2_F08_A002 3', mRNA sequence
Length = 593
Score = 290 bits (628), Expect = 2e-077
Identities = 117/156 (75%), Positives = 130/156 (83%)
Frame = -3 / +2
Query: 745 ELVAEPTDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNR 566
EL+AEP+DARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFL ELLFGKTPFKG+GNR
Sbjct: 2 ELIAEPSDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFL*ELLFGKTPFKGTGNR 181
Query: 565 ATLFNVVGQPLRFPESPVVSFAARDLIRGLLIKEPQHRLAYKRGATEIKQHPFFEGVNWA 386
ATLFNV+G PLRFPE PVVSF ARDLIR LL+KEPQ RL +KRG EIKQ PFFEGVNWA
Sbjct: 182 ATLFNVIGHPLRFPEYPVVSFPARDLIRSLLVKEPQQRLGFKRGPPEIKQPPFFEGVNWA 361
Query: 385 LIRCATPPDIPKPVEIPRSVASSSQKATSAAEKGSD 278
LIRCA+PP++P+ +I + SA + G D
Sbjct: 362 LIRCASPPEVPRHFDIENPPKHPVSTSESAPQNGGD 469
Score = 198 bits (427), Expect = 1e-049
Identities = 89/126 (70%), Positives = 95/126 (75%)
Frame = +3 / -3
Query: 339 ISTGLGISGGVAHLINAQLTPSKNGCCFISVAPRLYANRC*GSLMSNPLIRSLAAKLTTG 518
+S LG SGG+A INAQ TPSKNG CFIS PRL NRC GSL LI+SLA KLTTG
Sbjct: 408 MSKCLGTSGGLAQRINAQFTPSKNGGCFISGGPRLKPNRCWGSLTRRLLIKSLAGKLTTG 229
Query: 519 DSGNLKGCPTTLNNVALFPEPLNGVLPKRSSYKNMPNVHQSTALPCPSPFIISGAKYSWV 698
SG KG P TLN+VA FP PLNGV P RSSY+N+P VHQSTALP PSP IISGAKYS V
Sbjct: 228 YSGKRKG*PMTLNSVARFPVPLNGVFPNRSSYRNIPKVHQSTALP*PSPLIISGAKYSCV 49
Query: 699 PTKDID 716
PT DID
Sbjct: 48 PTNDID 31
Score = 124 bits (266), Expect = 2e-027
Identities = 56/120 (46%), Positives = 74/120 (61%)
Frame = +2 / -2
Query: 386 CPINTFKERVLFYFCGSTLIR*SMLRFLDEQSPNKIPCSKTHYR*FWEP*GLSNYVEQCR 565
CP++T K+ LFY G+TL S+L D+++ IP + H F E G++N +EQCR
Sbjct: 361 CPVHTLKKWGLFYLGGTTLKTQSLLGLFDQETSY*IPSWEAHNWIFRETQGVTNDIEQCR 182
Query: 566 PIPRTFEWCLAEEKLIQEYAKCPPVYSTSMPLALYNFRCQVLMGANKRHRPCICRLCNKL 745
P+PR FEW +++L+ EY K PPV ST+M L N QVLM NK HR CI R C KL
Sbjct: 181 PVPRAFEWGFPKQELL*EYTKGPPVNSTTMTLTFDNLGGQVLMCTNK*HRSCITRFCYKL 2
>gb|CF489555.1|CF489555 POL1_58_F10.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_58_F10_A002 3', mRNA sequence
Length = 692
Score = 283 bits (612), Expect = 3e-075
Identities = 113/149 (75%), Positives = 126/149 (84%)
Frame = -3 / +2
Query: 724 DARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVV 545
DARSMSFVGTHEYLAPEIIKGEGHGS VDW FGIFLYELLFGKTPFKG+G RATLFNV+
Sbjct: 2 DARSMSFVGTHEYLAPEIIKGEGHGSVVDWCPFGIFLYELLFGKTPFKGTGTRATLFNVI 181
Query: 544 GQPLRFPESPVVSFAARDLIRGLLIKEPQHRLAYKRGATEIKQHPFFEGVNWALIRCATP 365
GQPLRFPE PVVSF ARDLIR LL+K+PQ RL +KRGATEIKQHPFFEGVNWALIRCA+P
Sbjct: 182 GQPLRFPEYPVVSFPARDLIRSLLVKDPQQRLGFKRGATEIKQHPFFEGVNWALIRCASP 361
Query: 364 PDIPKPVEIPRSVASSSQKATSAAEKGSD 278
P++P+ +I + + SAA+ G D
Sbjct: 362 PEVPRHFDIEKPPKQPVSTSESAAQNGGD 448
Score = 201 bits (433), Expect = 2e-050
Identities = 89/126 (70%), Positives = 95/126 (75%)
Frame = +3 / -3
Query: 339 ISTGLGISGGVAHLINAQLTPSKNGCCFISVAPRLYANRC*GSLMSNPLIRSLAAKLTTG 518
+S LG SGG+A INAQ TPSKNGCCFISVAPRL NRC GSL LI+SLA KLTTG
Sbjct: 387 MSKCLGTSGGLAQRINAQFTPSKNGCCFISVAPRLKPNRCWGSLTKRLLIKSLAGKLTTG 208
Query: 519 DSGNLKGCPTTLNNVALFPEPLNGVLPKRSSYKNMPNVHQSTALPCPSPFIISGAKYSWV 698
SG KG P TLN+VA P PLNGV P RSSY+N+P HQST LP PSP IISGAKYS V
Sbjct: 207 YSGKRKG*PMTLNSVARVPVPLNGVFPNRSSYRNIPKGHQSTTLP*PSPLIISGAKYSCV 28
Query: 699 PTKDID 716
PT DID
Sbjct: 27 PTNDID 10
Score = 117 bits (251), Expect = 2e-025
Identities = 54/113 (47%), Positives = 70/113 (61%)
Frame = +2 / -2
Query: 386 CPINTFKERVLFYFCGSTLIR*SMLRFLDEQSPNKIPCSKTHYR*FWEP*GLSNYVEQCR 565
CP++T K+ VLFY G+TL S+L D+++ IP + H F E GL+N +EQ R
Sbjct: 340 CPVHTLKKWVLFYLGGTTLKTQSLLGVFDQETSY*IPSWEAHNWIFRETQGLTNDIEQRR 161
Query: 566 PIPRTFEWCLAEEKLIQEYAKCPPVYSTSMPLALYNFRCQVLMGANKRHRPCI 724
P PR FEWC +++LI EY K PV +T+M L N CQVLM NK HR CI
Sbjct: 160 PGPRAFEWCFPKQELI*EYTKGAPVNNTTMTLTFDNLGCQVLMCTNK*HRSCI 2
Score = 79.0 bits (166), Expect(3) = 8e-023
Identities = 33/72 (45%), Positives = 47/72 (65%)
Frame = -2 / +1
Query: 722 CKVYVFCWHP*VLGT*NYKGRGAWKCCRLVDIWHILV*ASLRQDTIQRFWE*GDIVQRSW 543
C + V CW+ *VLGT +Y+ G+W CC LV +W+I +*A + ++TIQR + GD VQ W
Sbjct: 4 CTIDVICWYT*VLGTRDYQR*GSW*CC*LVPLWYIPI*APVWENTIQRHGDPGDAVQCHW 183
Query: 542 TTLKVPRITCSE 507
+ L P I+ E
Sbjct: 184 SALAFP*ISSCE 219
Score = 44.6 bits (91), Expect(3) = 8e-023
Identities = 18/36 (50%), Positives = 24/36 (66%)
Frame = -2 / +1
Query: 470 QGTSASISV*AWSHRNKTAPVL*RC*LGINQVCHST 363
Q +I *AW HR+KTAP+ * C LGI+ +C S+
Sbjct: 256 QRPPTTIGF*AWCHRDKTAPIF*GCELGIDTLCESS 363
Score = 22.6 bits (43), Expect(3) = 8e-023
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -3 / +2
Query: 316 SQKATSAAEKGSDYLELEFF*WSR 245
S ++A G +YLE FF* +R
Sbjct: 413 STSESAAQNGGDNYLEFGFF*GNR 484
>gb|CW363768.1|CW363768 fsbb001f035i09k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f035i09, DNA
sequence
Length = 716
Score = 271 bits (587), Expect = 9e-072
Identities = 111/154 (72%), Positives = 124/154 (80%)
Frame = -3 / +2
Query: 745 ELVAEPTDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNR 566
E AEPT ARSMSFVGTHEYLAPEII+G+GHGSAVDWWTFGIFLYELL G TPFKGSGNR
Sbjct: 50 EFTAEPTSARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFLYELLHGATPFKGSGNR 229
Query: 565 ATLFNVVGQPLRFPESPVVSFAARDLIRGLLIKEPQHRLAYKRGATEIKQHPFFEGVNWA 386
ATLFNVV QPLRFP++P VS AARDLIRGLL KEP +RLA +RGA E+KQHPFFEGVNWA
Sbjct: 230 ATLFNVVAQPLRFPDAPAVSAAARDLIRGLLAKEPHNRLASRRGAAEVKQHPFFEGVNWA 409
Query: 385 LIRCATPPDIPKPVEIPRSVASSSQKATSAAEKG 284
L+R A PP IP + + + +AA +G
Sbjct: 410 LVRSAQPPYIPDAAAVDHCSSQFAFSDGAAAAQG 511
Score = 187 bits (402), Expect = 3e-046
Identities = 82/121 (67%), Positives = 91/121 (75%)
Frame = +3 / -3
Query: 354 GISGGVAHLINAQLTPSKNGCCFISVAPRLYANRC*GSLMSNPLIRSLAAKLTTGDSGNL 533
G+ GG A L +AQLTPSK GCCF S APR A+R GSL S P +RSLAA LT G SGNL
Sbjct: 441 GM*GGWALLTSAQLTPSKKGCCFTSAAPRRDASRLCGSLASRPRMRSLAAALTAGASGNL 262
Query: 534 KGCPTTLNNVALFPEPLNGVLPKRSSYKNMPNVHQSTALPCPSPFIISGAKYSWVPTKDI 713
GC TTL +VA FPEPL GV P RSS + MP VHQSTALP PSP +ISGA+YSWVPT D+
Sbjct: 261 SGCATTLKSVARFPEPLKGVAPCRSS*RKMPKVHQSTALPWPSPRMISGARYSWVPTNDM 82
Query: 714 D 716
D
Sbjct: 81 D 79
>gb|BE597334.1|BE597334 PI1_72_B09.g1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 614
Score = 270 bits (583), Expect = 3e-071
Identities = 104/112 (92%), Positives = 111/112 (99%)
Frame = -3 / +1
Query: 673 IIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPESPVVSFAAR 494
IIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPESP+VSF+AR
Sbjct: 1 IIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPESPIVSFSAR 180
Query: 493 DLIRGLLIKEPQHRLAYKRGATEIKQHPFFEGVNWALIRCATPPDIPKPVEI 338
D+IRGLL+K+PQHRL YKRGATEIKQHPFFEGVNWALIRCA+PPDIPKPVE+
Sbjct: 181 DMIRGLLVKDPQHRLGYKRGATEIKQHPFFEGVNWALIRCASPPDIPKPVEL 336
Score = 207 bits (447), Expect = 2e-052
Identities = 86/110 (78%), Positives = 92/110 (83%)
Frame = +3 / -1
Query: 342 STGLGISGGVAHLINAQLTPSKNGCCFISVAPRLYANRC*GSLMSNPLIRSLAAKLTTGD 521
STG G+SGG+AHL+ AQ TPSK GCCFISVAPRLY +RC GSL SNPLI SLA KLT GD
Sbjct: 332 STGFGMSGGLAHLMRAQFTPSKKGCCFISVAPRLYPSRCCGSLTSNPLIMSLAEKLTIGD 153
Query: 522 SGNLKGCPTTLNNVALFPEPLNGVLPKRSSYKNMPNVHQSTALPCPSPFI 671
SGNLKG PTTL +VA PEPLNGVLP +SYKNMP VHQSTALP PSPFI
Sbjct: 152 SGNLKGWPTTLKSVARLPEPLNGVLPNNNSYKNMPKVHQSTALPWPSPFI 3
Score = 111 bits (238), Expect = 1e-023
Identities = 51/111 (45%), Positives = 72/111 (64%)
Frame = +2 / -3
Query: 338 DLNWLGDIRWSGTPD*CPINTFKERVLFYFCGSTLIR*SMLRFLDEQSPNKIPCSKTHYR 517
+LN L + + P P++T KER+L Y +TL+ S+LR LD QSP +P + H
Sbjct: 336 ELNRLWYVWRACAPYESPVHTLKERMLLYLGSTTLVPKSVLRVLD*QSPYHVPRREAHNW 157
Query: 518 *FWEP*GLSNYVEQCRPIPRTFEWCLAEEKLIQEYAKCPPVYSTSMPLALY 670
WEP GL++ VE+C P+ TFE LA+++L+QEYAK PP++STSM L Y
Sbjct: 156 GLWEPQGLAHNVEECSPVA*TFERGLAKQQLVQEYAKGPPIHSTSMALPFY 4
>gb|AW565318.1|AW565318 LG1_342_A06.g1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 698
Score = 268 bits (579), Expect = 1e-070
Identities = 103/111 (92%), Positives = 110/111 (99%)
Frame = -3 / +3
Query: 670 IKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPESPVVSFAARD 491
IKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPESP+VSF+ARD
Sbjct: 3 IKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPESPIVSFSARD 182
Query: 490 LIRGLLIKEPQHRLAYKRGATEIKQHPFFEGVNWALIRCATPPDIPKPVEI 338
+IRGLL+K+PQHRL YKRGATEIKQHPFFEGVNWALIRCA+PPDIPKPVE+
Sbjct: 183 MIRGLLVKDPQHRLGYKRGATEIKQHPFFEGVNWALIRCASPPDIPKPVEL 335
Score = 207 bits (447), Expect = 2e-052
Identities = 86/110 (78%), Positives = 92/110 (83%)
Frame = +3 / -2
Query: 342 STGLGISGGVAHLINAQLTPSKNGCCFISVAPRLYANRC*GSLMSNPLIRSLAAKLTTGD 521
STG G+SGG+AHL+ AQ TPSK GCCFISVAPRLY +RC GSL SNPLI SLA KLT GD
Sbjct: 331 STGFGMSGGLAHLMRAQFTPSKKGCCFISVAPRLYPSRCCGSLTSNPLIMSLAEKLTIGD 152
Query: 522 SGNLKGCPTTLNNVALFPEPLNGVLPKRSSYKNMPNVHQSTALPCPSPFI 671
SGNLKG PTTL +VA PEPLNGVLP +SYKNMP VHQSTALP PSPFI
Sbjct: 151 SGNLKGWPTTLKSVARLPEPLNGVLPNNNSYKNMPKVHQSTALPWPSPFI 2
Score = 111 bits (238), Expect = 1e-023
Identities = 51/111 (45%), Positives = 72/111 (64%)
Frame = +2 / -1
Query: 338 DLNWLGDIRWSGTPD*CPINTFKERVLFYFCGSTLIR*SMLRFLDEQSPNKIPCSKTHYR 517
+LN L + + P P++T KER+L Y +TL+ S+LR LD QSP +P + H
Sbjct: 335 ELNRLWYVWRACAPYESPVHTLKERMLLYLGSTTLVPKSVLRVLD*QSPYHVPRREAHNW 156
Query: 518 *FWEP*GLSNYVEQCRPIPRTFEWCLAEEKLIQEYAKCPPVYSTSMPLALY 670
WEP GL++ VE+C P+ TFE LA+++L+QEYAK PP++STSM L Y
Sbjct: 155 GLWEPQGLAHNVEECSPVA*TFERGLAKQQLVQEYAKGPPIHSTSMALPFY 3
>gb|CW403691.1|CW403691 fsbb001f095i13k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f095i13, DNA
sequence
Length = 681
Score = 253 bits (546), Expect(2) = 7e-070
Identities = 100/131 (76%), Positives = 113/131 (86%)
Frame = -3 / +3
Query: 751 LPELVAEPTDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSG 572
LP+LV EPTDARS SFVGTHEYLAPEIIKG+GHGSAVDWWTFG+FLYELL+GKTPF+G G
Sbjct: 249 LPQLVVEPTDARSNSFVGTHEYLAPEIIKGDGHGSAVDWWTFGVFLYELLYGKTPFRGPG 428
Query: 571 NRATLFNVVGQPLRFPESPVVSFAARDLIRGLLIKEPQHRLAYKRGATEIKQHPFFEGVN 392
N TL NVV Q LRFP++P VS A+DLIRGLL+KEP++R RGA EIKQHPFFEG+N
Sbjct: 429 NDETLANVVSQNLRFPDNPSVSSNAKDLIRGLLVKEPENRFGSLRGAAEIKQHPFFEGLN 608
Query: 391 WALIRCATPPD 359
WALIR A PP+
Sbjct: 609 WALIRSAAPPE 641
Score = 159 bits (341), Expect = 7e-038
Identities = 71/120 (59%), Positives = 81/120 (67%)
Frame = +3 / -3
Query: 357 ISGGVAHLINAQLTPSKNGCCFISVAPRLYANRC*GSLMSNPLIRSLAAKLTTGDSGNLK 536
+SGG A I AQ PSK GCC IS AP N GS S PLIRSLA LT G SGN +
Sbjct: 643 VSGGAAERIRAQFNPSKKGCCLISAAPLNDPNLFSGSFTSKPLIRSLALLLTDGLSGNRR 464
Query: 537 GCPTTLNNVALFPEPLNGVLPKRSSYKNMPNVHQSTALPCPSPFIISGAKYSWVPTKDID 716
C TT NV+ FP PL GVLP +SS + P VHQSTALP PSP +ISGA+YS VPTK+++
Sbjct: 463 FCETTFANVSSFPGPLKGVLPYKSS*RKTPKVHQSTALPWPSPLMISGARYSCVPTKELE 284
Score = 108 bits (231), Expect = 1e-022
Identities = 59/121 (48%), Positives = 74/121 (61%)
Frame = +2 / -2
Query: 389 PINTFKERVLFYFCGSTLIR*SMLRFLDEQSPNKIPCSKTHYR*FWEP*GLSNYVEQCRP 568
PI +FKERVL F S+ S+LR L + + ++I H WEP L +++ QC
Sbjct: 611 PIQSFKERVLLDFSSSSQRSKSVLRLLHQ*TSDQIFGVAAHRWIVWEPEIL*DHICQCFI 432
Query: 569 IPRTFEWCLAEEKLIQEYAKCPPVYSTSMPLALYNFRCQVLMGANKRHRPCICRLCNKLR 748
IPR+ E CLA K I+E AK PPV STSM + +F C+VLM ANK R CI RL NKLR
Sbjct: 431 IPRSSEGCLAI*KFIKEDAKGPPVNSTSMAIPFDDFWCKVLMCANKGIRACISRLYNKLR 252
Query: 749 K 751
K
Sbjct: 251 K 249
Score = 33.1 bits (66), Expect(2) = 7e-070
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -3 / +3
Query: 901 CVQPVCIEPACMQPSCVTTTTCFSPR 824
C + CI +C+Q T+CF+PR
Sbjct: 123 CAENYCINSSCLQQPSCAQTSCFTPR 200
>gb|CW176244.1|CW176244 104_589_11158384_148_36680_062 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11158384, DNA
sequence
Length = 724
Score = 261 bits (564), Expect = 1e-068
Identities = 104/164 (63%), Positives = 128/164 (78%)
Frame = -3 / -1
Query: 751 LPELVAEPTDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSG 572
LP+LV EPT+ARS SFVGTHEYLAPEII+G+GHGS+VDWWT GIFLYELL+GKTPFKG G
Sbjct: 634 LPQLVVEPTEARSNSFVGTHEYLAPEIIRGDGHGSSVDWWTLGIFLYELLYGKTPFKGPG 455
Query: 571 NRATLFNVVGQPLRFPESPVVSFAARDLIRGLLIKEPQHRLAYKRGATEIKQHPFFEGVN 392
N TL NV+ Q L+FP++P VSF ARDLIRGLL+KEP+ RL RGA EIK+HPFFEG+N
Sbjct: 454 NEETLSNVISQGLKFPDNPAVSFHARDLIRGLLVKEPECRLGSSRGAAEIKRHPFFEGLN 275
Query: 391 WALIRCATPPDIPKPVEIPRSVASSSQKATSAAEKGSDYLELEF 260
WALIR PP+ PK ++ ++A+ +K E + ++EF
Sbjct: 274 WALIRWTAPPETPKNIDTAAALATRKKKEGKCLEFRLNGDDIEF 143
Score = 161 bits (347), Expect = 1e-038
Identities = 73/137 (53%), Positives = 88/137 (64%)
Frame = +3 / +3
Query: 306 AFWLDEATERGISTGLGISGGVAHLINAQLTPSKNGCCFISVAPRLYANRC*GSLMSNPL 485
+F+L A+ +S G+SGG H I AQ PSK GC IS AP +R GS S+PL
Sbjct: 189 SFFLRVASAAAVSMFFGVSGGAVHRIKAQFRPSKKGCRLISAAPLDEPSRHSGSFTSSPL 368
Query: 486 IRSLAAKLTTGDSGNLKGCPTTLNNVALFPEPLNGVLPKRSSYKNMPNVHQSTALPCPSP 665
IRS A KLT G SGN K C T +V+ P PLNGVLP +S + +P VHQST LP PSP
Sbjct: 369 IRSRAWKLTAGLSGNFKPCEITFESVSSLPGPLNGVLP*SNS*RKIPRVHQSTELPWPSP 548
Query: 666 FIISGAKYSWVPTKDID 716
+ISGA+YSWVPT + D
Sbjct: 549 RMISGARYSWVPTNEFD 599
>gb|CW105163.1|CW105163 104_474_11012772_116_34453_042 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11012772, DNA
sequence
Length = 714
Score = 253 bits (546), Expect(2) = 4e-067
Identities = 100/131 (76%), Positives = 113/131 (86%)
Frame = -3 / +1
Query: 751 LPELVAEPTDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSG 572
LP+LV EPTDARS SFVGTHEYLAPEIIKG+GHGSAVDWWTFG+FLYELL+GKTPF+G G
Sbjct: 103 LPQLVVEPTDARSNSFVGTHEYLAPEIIKGDGHGSAVDWWTFGVFLYELLYGKTPFRGPG 282
Query: 571 NRATLFNVVGQPLRFPESPVVSFAARDLIRGLLIKEPQHRLAYKRGATEIKQHPFFEGVN 392
N TL NVV Q LRFP++P VS A+DLIRGLL+KEP++R RGA EIKQHPFFEG+N
Sbjct: 283 NDETLANVVSQNLRFPDNPSVSSNAKDLIRGLLVKEPENRFGSLRGAAEIKQHPFFEGLN 462
Query: 391 WALIRCATPPD 359
WALIR A PP+
Sbjct: 463 WALIRSAAPPE 495
Score = 159 bits (341), Expect = 7e-038
Identities = 71/120 (59%), Positives = 81/120 (67%)
Frame = +3 / -2
Query: 357 ISGGVAHLINAQLTPSKNGCCFISVAPRLYANRC*GSLMSNPLIRSLAAKLTTGDSGNLK 536
+SGG A I AQ PSK GCC IS AP N GS S PLIRSLA LT G SGN +
Sbjct: 497 VSGGAAERIRAQFNPSKKGCCLISAAPLNDPNLFSGSFTSKPLIRSLALLLTDGLSGNRR 318
Query: 537 GCPTTLNNVALFPEPLNGVLPKRSSYKNMPNVHQSTALPCPSPFIISGAKYSWVPTKDID 716
C TT NV+ FP PL GVLP +SS + P VHQSTALP PSP +ISGA+YS VPTK+++
Sbjct: 317 FCETTFANVSSFPGPLKGVLPYKSS*RKTPKVHQSTALPWPSPLMISGARYSCVPTKELE 138
Score = 108 bits (231), Expect = 1e-022
Identities = 59/121 (48%), Positives = 74/121 (61%)
Frame = +2 / -1
Query: 389 PINTFKERVLFYFCGSTLIR*SMLRFLDEQSPNKIPCSKTHYR*FWEP*GLSNYVEQCRP 568
PI +FKERVL F S+ S+LR L + + ++I H WEP L +++ QC
Sbjct: 465 PIQSFKERVLLDFSSSSQRSKSVLRLLHQ*TSDQIFGVAAHRWIVWEPEIL*DHICQCFI 286
Query: 569 IPRTFEWCLAEEKLIQEYAKCPPVYSTSMPLALYNFRCQVLMGANKRHRPCICRLCNKLR 748
IPR+ E CLA K I+E AK PPV STSM + +F C+VLM ANK R CI RL NKLR
Sbjct: 285 IPRSSEGCLAI*KFIKEDAKGPPVNSTSMAIPFDDFWCKVLMCANKGIRACISRLYNKLR 106
Query: 749 K 751
K
Sbjct: 105 K 103
Score = 24.0 bits (46), Expect(2) = 4e-067
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = -3 / +1
Query: 874 ACMQPSCVTTTTCFSPR 824
+C+Q T+CF+PR
Sbjct: 4 SCLQQPSCAQTSCFTPR 54
>gb|CN149831.1|CN149831 WOUND1_65_D05.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_65_D05_A002 3', mRNA sequence
Length = 685
Score = 253 bits (546), Expect = 4e-066
Identities = 100/131 (76%), Positives = 113/131 (86%)
Frame = -3 / +2
Query: 751 LPELVAEPTDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSG 572
LP+LV EPTDARS SFVGTHEYLAPEIIKG+GHGSAVDWWTFG+FLYELL+GKTPF+G G
Sbjct: 47 LPQLVVEPTDARSNSFVGTHEYLAPEIIKGDGHGSAVDWWTFGVFLYELLYGKTPFRGPG 226
Query: 571 NRATLFNVVGQPLRFPESPVVSFAARDLIRGLLIKEPQHRLAYKRGATEIKQHPFFEGVN 392
N TL NVV Q LRFP++P VS A+DLIRGLL+KEP++R RGA EIKQHPFFEG+N
Sbjct: 227 NDETLANVVSQNLRFPDNPSVSSNAKDLIRGLLVKEPENRFGSLRGAAEIKQHPFFEGLN 406
Query: 391 WALIRCATPPD 359
WALIR A PP+
Sbjct: 407 WALIRSAAPPE 439
Score = 159 bits (341), Expect = 7e-038
Identities = 71/120 (59%), Positives = 81/120 (67%)
Frame = +3 / -2
Query: 357 ISGGVAHLINAQLTPSKNGCCFISVAPRLYANRC*GSLMSNPLIRSLAAKLTTGDSGNLK 536
+SGG A I AQ PSK GCC IS AP N GS S PLIRSLA LT G SGN +
Sbjct: 441 VSGGAAERIRAQFNPSKKGCCLISAAPLNDPNLFSGSFTSKPLIRSLALLLTDGLSGNRR 262
Query: 537 GCPTTLNNVALFPEPLNGVLPKRSSYKNMPNVHQSTALPCPSPFIISGAKYSWVPTKDID 716
C TT NV+ FP PL GVLP +SS + P VHQSTALP PSP +ISGA+YS VPTK+++
Sbjct: 261 FCETTFANVSSFPGPLKGVLPYKSS*RKTPKVHQSTALPWPSPLMISGARYSCVPTKELE 82
Score = 108 bits (231), Expect = 1e-022
Identities = 59/121 (48%), Positives = 74/121 (61%)
Frame = +2 / -1
Query: 389 PINTFKERVLFYFCGSTLIR*SMLRFLDEQSPNKIPCSKTHYR*FWEP*GLSNYVEQCRP 568
PI +FKERVL F S+ S+LR L + + ++I H WEP L +++ QC
Sbjct: 409 PIQSFKERVLLDFSSSSQRSKSVLRLLHQ*TSDQIFGVAAHRWIVWEPEIL*DHICQCFI 230
Query: 569 IPRTFEWCLAEEKLIQEYAKCPPVYSTSMPLALYNFRCQVLMGANKRHRPCICRLCNKLR 748
IPR+ E CLA K I+E AK PPV STSM + +F C+VLM ANK R CI RL NKLR
Sbjct: 229 IPRSSEGCLAI*KFIKEDAKGPPVNSTSMAIPFDDFWCKVLMCANKGIRACISRLYNKLR 50
Query: 749 K 751
K
Sbjct: 49 K 47
>gb|BF705043.1|BF705043 RHIZ2_1_F10.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 639
Score = 248 bits (535), Expect = 1e-064
Identities = 95/103 (92%), Positives = 102/103 (99%)
Frame = -3 / +1
Query: 646 AVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPESPVVSFAARDLIRGLLIK 467
AVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPESP+VSF+ARD+IRGLL+K
Sbjct: 1 AVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPESPIVSFSARDMIRGLLVK 180
Query: 466 EPQHRLAYKRGATEIKQHPFFEGVNWALIRCATPPDIPKPVEI 338
+PQHRL YKRGATEIKQHPFFEGVNWALIRCA+PPDIPKPVE+
Sbjct: 181 DPQHRLGYKRGATEIKQHPFFEGVNWALIRCASPPDIPKPVEL 309
Score = 188 bits (406), Expect = 8e-047
Identities = 78/101 (77%), Positives = 84/101 (83%)
Frame = +3 / -2
Query: 342 STGLGISGGVAHLINAQLTPSKNGCCFISVAPRLYANRC*GSLMSNPLIRSLAAKLTTGD 521
STG G+SGG+AHL+ AQ TPSK GCCFISVAPRLY +RC GSL SNPLI SLA KLT GD
Sbjct: 305 STGFGMSGGLAHLMRAQFTPSKKGCCFISVAPRLYPSRCCGSLTSNPLIMSLAEKLTIGD 126
Query: 522 SGNLKGCPTTLNNVALFPEPLNGVLPKRSSYKNMPNVHQST 644
SGNLKG PTTL +VA PEPLNGVLP +SYKNMP VHQST
Sbjct: 125 SGNLKGWPTTLKSVARLPEPLNGVLPNNNSYKNMPKVHQST 3
>gb|CN147521.1|CN147521 WOUND1_50_F12.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_50_F12_A002 3', mRNA sequence
Length = 763
Score = 243 bits (524), Expect = 4e-063
Identities = 97/131 (74%), Positives = 110/131 (83%)
Frame = -3 / +3
Query: 751 LPELVAEPTDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSG 572
LP+LV EPTDARS SFVGTHEYLAPEIIKG+GHGSAVD WTFG+FLYELL+GKTPF+G G
Sbjct: 42 LPQLVVEPTDARSNSFVGTHEYLAPEIIKGDGHGSAVDRWTFGVFLYELLYGKTPFRGPG 221
Query: 571 NRATLFNVVGQPLRFPESPVVSFAARDLIRGLLIKEPQHRLAYKRGATEIKQHPFFEGVN 392
N TL NVV Q LRFP++P VS A+DLIRGLL+KEP++R RG EIKQHPFFEG+N
Sbjct: 222 NDETLANVVSQNLRFPDNPSVSSNAKDLIRGLLVKEPENRFGSLRGVAEIKQHPFFEGLN 401
Query: 391 WALIRCATPPD 359
WALIR PP+
Sbjct: 402 WALIRSGAPPE 434
Score = 153 bits (328), Expect = 5e-036
Identities = 68/120 (56%), Positives = 79/120 (65%)
Frame = +3 / -1
Query: 357 ISGGVAHLINAQLTPSKNGCCFISVAPRLYANRC*GSLMSNPLIRSLAAKLTTGDSGNLK 536
+SGG I AQ PSK GCC IS P N GS S PLIRSLA LT G SGN +
Sbjct: 436 VSGGAPERIRAQFNPSKKGCCLISATPLNDPNLFSGSFTSKPLIRSLALLLTDGLSGNRR 257
Query: 537 GCPTTLNNVALFPEPLNGVLPKRSSYKNMPNVHQSTALPCPSPFIISGAKYSWVPTKDID 716
C TT NV+ FP PL GVLP +SS + P VH+STALP PSP +ISGA+YS VPTK+++
Sbjct: 256 FCETTFANVSSFPGPLKGVLPYKSS*RKTPKVHRSTALPWPSPLMISGARYSCVPTKELE 77
Score = 108 bits (231), Expect = 1e-022
Identities = 59/121 (48%), Positives = 74/121 (61%)
Frame = +2 / -3
Query: 389 PINTFKERVLFYFCGSTLIR*SMLRFLDEQSPNKIPCSKTHYR*FWEP*GLSNYVEQCRP 568
PI +FKERVL F S+ S+LR L + + ++I H WEP L +++ QC
Sbjct: 404 PIQSFKERVLLDFSNSSQRSKSVLRLLHQ*TSDQIFGVAAHRWIVWEPEIL*DHICQCFI 225
Query: 569 IPRTFEWCLAEEKLIQEYAKCPPVYSTSMPLALYNFRCQVLMGANKRHRPCICRLCNKLR 748
IPR+ E CLA K I+E AK PPV STSM + +F C+VLM ANK R CI RL NKLR
Sbjct: 224 IPRSSEGCLAI*KFIKEDAKGPPVNSTSMAIPFDDFWCKVLMCANKGIRACISRLYNKLR 45
Query: 749 K 751
K
Sbjct: 44 K 42
>gb|CW223651.1|CW223651 104_659_11203029_148_37186_085 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11203029, DNA
sequence
Length = 726
Score = 144 bits (308), Expect(2) = 5e-063
Identities = 56/64 (87%), Positives = 59/64 (92%)
Frame = -3 / +1
Query: 715 SMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQP 536
SMSFVGTHEYLAPEII+GEGHGSAVDWWT GIFLYELL G TPFKG+GNRATL NV+ QP
Sbjct: 1 SMSFVGTHEYLAPEIIRGEGHGSAVDWWTLGIFLYELLHGSTPFKGAGNRATLCNVIEQP 180
Query: 535 LRFP 524
LRFP
Sbjct: 181 LRFP 192
Score = 119 bits (254), Expect(2) = 5e-063
Identities = 46/75 (61%), Positives = 59/75 (78%)
Frame = -3 / +1
Query: 517 PVVSFAARDLIRGLLIKEPQHRLAYKRGATEIKQHPFFEGVNWALIRCATPPDIPKPVEI 338
P VS ARDLIRGLL+K+PQ R+A+ RGATEIKQHPFFEGVNWAL+R TPP +P PV+
Sbjct: 214 PAVSSVARDLIRGLLVKDPQKRIAFTRGATEIKQHPFFEGVNWALVRSMTPPSVPDPVDF 393
Query: 337 PRSVASSSQKATSAA 293
+ A+ +KA+ ++
Sbjct: 394 RQYGAAKEKKASDSS 438
Score = 88.6 bits (187), Expect(2) = 2e-035
Identities = 38/63 (60%), Positives = 45/63 (71%)
Frame = +3 / -2
Query: 525 GNLKGCPTTLNNVALFPEPLNGVLPKRSSYKNMPNVHQSTALPCPSPFIISGAKYSWVPT 704
G GC TL++VA P PL GV P SS + MP+VHQSTALP PSP +ISGA+YS VPT
Sbjct: 191 GKRSGCSMTLHSVARLPAPLKGVEPCSSS*RKMPSVHQSTALPWPSPRMISGARYSCVPT 12
Query: 705 KDI 713
D+
Sbjct: 11 NDM 3
Score = 82.6 bits (174), Expect(2) = 2e-035
Identities = 38/59 (64%), Positives = 42/59 (71%)
Frame = +3 / -2
Query: 342 STGLGISGGVAHLINAQLTPSKNGCCFISVAPRLYANRC*GSLMSNPLIRSLAAKLTTG 518
STG G GGV L +AQLTPSKNGCC ISVAP + A R GSL S P +RSLA +LT G
Sbjct: 389 STGSGTDGGVMLLTSAQLTPSKNGCCLISVAPLVKAIRFCGSLTSRPRMRSLATELTAG 213
>gb|CW073807.1|CW073807 104_340_10781623_116_31470_103 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10781623, DNA
sequence
Length = 596
Score = 227 bits (491), Expect = 2e-058
Identities = 92/134 (68%), Positives = 106/134 (79%)
Frame = -3 / -3
Query: 685 LAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPESPVVS 506
LAPEII+G+GHG AVDWWTFGIFLYEL+ G TPFKGSGNRATLFNVV QPLRFP++P VS
Sbjct: 594 LAPEIIRGDGHGRAVDWWTFGIFLYELMHGATPFKGSGNRATLFNVVAQPLRFPDAPAVS 415
Query: 505 FAARDLIRGLLIKEPQHRLAYKRGATEIKQHPFFEGVNWALIRCATPPDIPKPVEIPRSV 326
AARDLIRGLL KEP +RLA +RGA E+KQHPFFEGVNWAL+R A PP IP +
Sbjct: 414 AAARDLIRGLLAKEPHNRLASRRGAAEVKQHPFFEGVNWALVRSAQPPYIPDAAAVDHCS 235
Query: 325 ASSSQKATSAAEKG 284
+ + +AA +G
Sbjct: 234 SQFAFSDGAAAAQG 193
Score = 160 bits (345), Expect = 2e-038
Identities = 73/111 (65%), Positives = 81/111 (72%)
Frame = +3 / +2
Query: 354 GISGGVAHLINAQLTPSKNGCCFISVAPRLYANRC*GSLMSNPLIRSLAAKLTTGDSGNL 533
G+ GG A L +AQLTPSK GCCF S APR A+R GSL S P +RSLAA LT G SGNL
Sbjct: 263 GM*GGWALLTSAQLTPSKKGCCFTSAAPRRDASRLCGSLASRPRMRSLAAALTAGASGNL 442
Query: 534 KGCPTTLNNVALFPEPLNGVLPKRSSYKNMPNVHQSTALPCPSPFIISGAK 686
GC TTL +VA FPEPL GV P SS + MP VHQSTALP PSP +ISGA+
Sbjct: 443 SGCATTLKSVARFPEPLKGVAPCMSS*RKMPKVHQSTALPWPSPRMISGAR 595
>gb|CW308233.1|CW308233 104_796_11468560_116_35731_054 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11468560, DNA
sequence
Length = 613
Score = 222 bits (479), Expect = 7e-057
Identities = 87/141 (61%), Positives = 103/141 (73%)
Frame = -3 / -3
Query: 745 ELVAEPTDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNR 566
E VAEP + RSMSFVGTHEYLAPEI+ GEGHGS+VDWWT G+F++ELL+G TPFKG
Sbjct: 569 EFVAEPVELRSMSFVGTHEYLAPEIVSGEGHGSSVDWWTLGVFVFELLYGVTPFKGYDIE 390
Query: 565 ATLFNVVGQPLRFPESPVVSFAARDLIRGLLIKEPQHRLAYKRGATEIKQHPFFEGVNWA 386
TL N+V + L FP P VS AARDL+ LL K+P RL GA IK+HPFF GVNWA
Sbjct: 389 MTLANIVARALEFPRDPAVSSAARDLVTALLAKDPARRLGATVGAAAIKRHPFFGGVNWA 210
Query: 385 LIRCATPPDIPKPVEIPRSVA 323
L+RCATPP +P P + + A
Sbjct: 209 LLRCATPPYVPPPFSVANNKA 147
Score = 129 bits (276), Expect = 7e-029
Identities = 65/123 (52%), Positives = 73/123 (59%)
Frame = +3 / +1
Query: 348 GLGISGGVAHLINAQLTPSKNGCCFISVAPRLYANRC*GSLMSNPLIRSLAAKLTTGDSG 527
G G GGVA AQLTP KNG I+ AP + R GSL + + RSLAA T G G
Sbjct: 172 GGGT*GGVAQRSRAQLTPPKNGWRLIAAAPTVAPRRRAGSLARSAVTRSLAADDTAGSRG 351
Query: 528 NLKGCPTTLNNVALFPEPLNGVLPKRSSYKNMPNVHQSTALPCPSPFIISGAKYSWVPTK 707
N T L +V PLNGV P RSS P+VHQST LPCPSP ISGA+YS VPT
Sbjct: 352 NSSARATMLASVISMS*PLNGVTP*RSSKTKTPSVHQSTELPCPSPDTISGARYSCVPTN 531
Query: 708 DID 716
D+D
Sbjct: 532 DMD 540
>gb|BG357481.1|BG357481 OV2_30_D12.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 658
Score = 222 bits (479), Expect = 7e-057
Identities = 86/96 (89%), Positives = 93/96 (96%)
Frame = -3 / +2
Query: 619 FLYELLFGKTPFKGSGNRATLFNVVGQPLRFPESPVVSFAARDLIRGLLIKEPQHRLAYK 440
FLYELLFGKTPFKGSGNRATLFNVVGQPLRFPESP+VSF+ARDLIRGLL+K+PQHRL YK
Sbjct: 2 FLYELLFGKTPFKGSGNRATLFNVVGQPLRFPESPIVSFSARDLIRGLLVKDPQHRLGYK 181
Query: 439 RGATEIKQHPFFEGVNWALIRCATPPDIPKPVEIPR 332
RG TEIKQHPFFEGVNWALIRCA+PPD+PKPVE+ R
Sbjct: 182 RGTTEIKQHPFFEGVNWALIRCASPPDVPKPVELDR 289
Score = 158 bits (339), Expect = 1e-037
Identities = 68/96 (70%), Positives = 74/96 (77%)
Frame = +3 / -2
Query: 333 RGISTGLGISGGVAHLINAQLTPSKNGCCFISVAPRLYANRC*GSLMSNPLIRSLAAKLT 512
R STG G SGG+AH INAQ TPSKNGCC ISV PRL RC GSL SNPLI+SLA KLT
Sbjct: 288 RSSSTGFGTSGGLAHRINAQFTPSKNGCCLISVVPRL*PRRCCGSLTSNPLIKSLAEKLT 109
Query: 513 TGDSGNLKGCPTTLNNVALFPEPLNGVLPKRSSYKN 620
GDSGN +G PTTL +VA FP+PL GVLP RSS +N
Sbjct: 108 IGDSGNRRG*PTTLKSVARFPDPLKGVLPNRSS*RN 1
>gb|BE594970.1|BE594970 PI1_48_B08.g1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 645
Score = 221 bits (478), Expect = 9e-057
Identities = 86/94 (91%), Positives = 93/94 (98%)
Frame = -3 / +3
Query: 619 FLYELLFGKTPFKGSGNRATLFNVVGQPLRFPESPVVSFAARDLIRGLLIKEPQHRLAYK 440
FLYELLFGKTPFKGSGNRATLFNVVGQPLRFPESP+VSF+ARD+IRGLL+K+PQHRL YK
Sbjct: 3 FLYELLFGKTPFKGSGNRATLFNVVGQPLRFPESPIVSFSARDMIRGLLVKDPQHRLGYK 182
Query: 439 RGATEIKQHPFFEGVNWALIRCATPPDIPKPVEI 338
RGATEIKQHPFFEGVNWALIRCA+PPDIPKPVE+
Sbjct: 183 RGATEIKQHPFFEGVNWALIRCASPPDIPKPVEL 284
Score = 171 bits (368), Expect = 1e-041
Identities = 71/93 (76%), Positives = 77/93 (82%)
Frame = +3 / -3
Query: 342 STGLGISGGVAHLINAQLTPSKNGCCFISVAPRLYANRC*GSLMSNPLIRSLAAKLTTGD 521
STG G+SGG+AHL+ AQ TPSK GCCFISVAPRLY +RC GSL SNPLI SLA KLT GD
Sbjct: 280 STGFGMSGGLAHLMRAQFTPSKKGCCFISVAPRLYPSRCCGSLTSNPLIMSLAEKLTIGD 101
Query: 522 SGNLKGCPTTLNNVALFPEPLNGVLPKRSSYKN 620
SGNLKG PTTL +VA PEPLNGVLP +SYKN
Sbjct: 100 SGNLKGWPTTLKSVARLPEPLNGVLPNNNSYKN 2
>gb|BF422042.1|BF422042 FM1_12_C02.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 591
Score = 221 bits (477), Expect = 1e-056
Identities = 86/114 (75%), Positives = 98/114 (85%)
Frame = -3 / +3
Query: 700 GTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPE 521
GTHEYLAPEIIKG+GHGSAVDWWTFG+FLYELL+GKTPF+G GN TL NVV Q LRFP+
Sbjct: 3 GTHEYLAPEIIKGDGHGSAVDWWTFGVFLYELLYGKTPFRGPGNDETLANVVSQNLRFPD 182
Query: 520 SPVVSFAARDLIRGLLIKEPQHRLAYKRGATEIKQHPFFEGVNWALIRCATPPD 359
+P VS A+DLIRGLL+KEP++R RGA EIKQHPFFEG+NWALIR A PP+
Sbjct: 183 NPSVSSNAKDLIRGLLVKEPENRFGSLRGAAEIKQHPFFEGLNWALIRSAAPPE 344
Score = 151 bits (324), Expect = 2e-035
Identities = 69/115 (60%), Positives = 76/115 (66%)
Frame = +3 / -3
Query: 357 ISGGVAHLINAQLTPSKNGCCFISVAPRLYANRC*GSLMSNPLIRSLAAKLTTGDSGNLK 536
+SGG A I AQ PSK GCC IS AP N GS S PLIRSLA LT G SGN +
Sbjct: 346 VSGGAAERIRAQFKPSKKGCCLISAAPLNDPNLFSGSFTSKPLIRSLALLLTDGLSGNRR 167
Query: 537 GCPTTLNNVALFPEPLNGVLPKRSSYKNMPNVHQSTALPCPSPFIISGAKYSWVP 701
C TT NV+ FP PL GVLP +SS + P VHQSTALP PSP +ISGA+YS VP
Sbjct: 166 FCETTFANVSSFPGPLKGVLPYKSS*RKTPKVHQSTALPWPSPLMISGARYSCVP 2
>gb|AW923900.1|AW923900 WS1_30_E12.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 569
Score = 196 bits (423), Expect(2) = 1e-055
Identities = 75/86 (87%), Positives = 83/86 (96%)
Frame = -3 / +2
Query: 589 PFKGSGNRATLFNVVGQPLRFPESPVVSFAARDLIRGLLIKEPQHRLAYKRGATEIKQHP 410
PF+GSGNRATLFNVVGQPLRFPESP+VSF+ARDLIRGLL+K+PQHRL YKRG TEIKQHP
Sbjct: 44 PFQGSGNRATLFNVVGQPLRFPESPIVSFSARDLIRGLLVKDPQHRLGYKRGTTEIKQHP 223
Query: 409 FFEGVNWALIRCATPPDIPKPVEIPR 332
FFEGVNWALIRCA+PPD+PKPVE+ R
Sbjct: 224 FFEGVNWALIRCASPPDVPKPVELDR 301
Score = 139 bits (299), Expect = 5e-032
Identities = 60/86 (69%), Positives = 65/86 (75%)
Frame = +3 / -3
Query: 333 RGISTGLGISGGVAHLINAQLTPSKNGCCFISVAPRLYANRC*GSLMSNPLIRSLAAKLT 512
R STG G SGG+AH INAQ TPSKNGCC ISV PRL RC GSL SNPLI+SLA KLT
Sbjct: 300 RSSSTGFGTSGGLAHRINAQFTPSKNGCCLISVVPRL*PRRCCGSLTSNPLIKSLAEKLT 121
Query: 513 TGDSGNLKGCPTTLNNVALFPEPLNG 590
GDSGN +G PTTL +VA FP+P G
Sbjct: 120 IGDSGNRRG*PTTLKSVARFPDP*KG 43
Score = 41.8 bits (85), Expect(2) = 1e-055
Identities = 16/18 (88%), Positives = 17/18 (94%)
Frame = -3 / +3
Query: 631 TFGIFLYELLFGKTPFKG 578
T GIFLYELLFGKTPF+G
Sbjct: 3 TRGIFLYELLFGKTPFRG 56
>gb|CF074385.1|CF074385 FE1_24_H07.b1_A002 Iron-deficient seedlings Sorghum bicolor cDNA
clone FE1_24_H07_A002 3', mRNA sequence
Length = 635
Score = 214 bits (461), Expect = 2e-054
Identities = 83/91 (91%), Positives = 90/91 (98%)
Frame = -3 / +3
Query: 610 ELLFGKTPFKGSGNRATLFNVVGQPLRFPESPVVSFAARDLIRGLLIKEPQHRLAYKRGA 431
ELLFGKTPFKGSGNRATLFNVVGQPLRFPESP+VSF+ARD+IRGLL+K+PQHRL YKRGA
Sbjct: 3 ELLFGKTPFKGSGNRATLFNVVGQPLRFPESPIVSFSARDMIRGLLVKDPQHRLGYKRGA 182
Query: 430 TEIKQHPFFEGVNWALIRCATPPDIPKPVEI 338
TEIKQHPFFEGVNWALIRCA+PPDIPKPVE+
Sbjct: 183 TEIKQHPFFEGVNWALIRCASPPDIPKPVEL 275
Score = 163 bits (350), Expect = 4e-039
Identities = 68/90 (75%), Positives = 74/90 (82%)
Frame = +3 / -2
Query: 342 STGLGISGGVAHLINAQLTPSKNGCCFISVAPRLYANRC*GSLMSNPLIRSLAAKLTTGD 521
STG G+SGG+AHL+ AQ TPSK GCCFISVAPRLY +RC GSL SNPLI SLA KLT GD
Sbjct: 271 STGFGMSGGLAHLMRAQFTPSKKGCCFISVAPRLYPSRCCGSLTSNPLIMSLAEKLTIGD 92
Query: 522 SGNLKGCPTTLNNVALFPEPLNGVLPKRSS 611
SGNLKG PTTL +VA PEPLNGVLP +S
Sbjct: 91 SGNLKGWPTTLKSVARLPEPLNGVLPNNNS 2
>gb|CN126293.1|CN126293 RHOH1_16_G04.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_16_G04_A002 3', mRNA sequence
Length = 820
Score = 213 bits (460), Expect = 3e-054
Identities = 84/98 (85%), Positives = 91/98 (92%)
Frame = -3 / +1
Query: 625 GIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPESPVVSFAARDLIRGLLIKEPQHRLA 446
G F LLFGKTPFKGSGNRATLFNVVGQPLRFPESP+VSF+ARDLIRGLL+K+PQHRL
Sbjct: 127 GSFQCLLLFGKTPFKGSGNRATLFNVVGQPLRFPESPIVSFSARDLIRGLLVKDPQHRLG 306
Query: 445 YKRGATEIKQHPFFEGVNWALIRCATPPDIPKPVEIPR 332
YKRG TEIKQHPFFEGVNWALIRCA+PPD+PKPVE+ R
Sbjct: 307 YKRGTTEIKQHPFFEGVNWALIRCASPPDVPKPVELDR 420
Score = 155 bits (334), Expect = 7e-037
Identities = 67/98 (68%), Positives = 73/98 (74%)
Frame = +3 / -3
Query: 333 RGISTGLGISGGVAHLINAQLTPSKNGCCFISVAPRLYANRC*GSLMSNPLIRSLAAKLT 512
R STG G SGG+AH INAQ TPSKNGCC ISV PRL RC GSL SNPLI+SLA KLT
Sbjct: 419 RSSSTGFGTSGGLAHRINAQFTPSKNGCCLISVVPRL*PRRCCGSLTSNPLIKSLAEKLT 240
Query: 513 TGDSGNLKGCPTTLNNVALFPEPLNGVLPKRSSYKNMP 626
GDSGN +G PTTL +VA FP+PL GVLP RS + P
Sbjct: 239 IGDSGNRRG*PTTLKSVARFPDPLKGVLPNRSKHWKDP 126
>gb|CN126382.1|CN126382 RHOH1_16_G04.g1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_16_G04_A002 5', mRNA sequence
Length = 724
Score = 211 bits (456), Expect = 1e-053
Identities = 83/96 (86%), Positives = 90/96 (93%)
Frame = -3 / +2
Query: 625 GIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPESPVVSFAARDLIRGLLIKEPQHRLA 446
G F LLFGKTPFKGSGNRATLFNVVGQPLRFPESP+VSF+ARDLIRGLL+K+PQHRL
Sbjct: 437 GSFQCLLLFGKTPFKGSGNRATLFNVVGQPLRFPESPIVSFSARDLIRGLLVKDPQHRLG 616
Query: 445 YKRGATEIKQHPFFEGVNWALIRCATPPDIPKPVEI 338
YKRG TEIKQHPFFEGVNWALIRCA+PPD+PKPVE+
Sbjct: 617 YKRGTTEIKQHPFFEGVNWALIRCASPPDVPKPVEL 724
Score = 154 bits (331), Expect = 2e-036
Identities = 66/95 (69%), Positives = 72/95 (75%)
Frame = +3 / -2
Query: 342 STGLGISGGVAHLINAQLTPSKNGCCFISVAPRLYANRC*GSLMSNPLIRSLAAKLTTGD 521
STG G SGG+AH INAQ TPSKNGCC ISV PRL RC GSL SNPLI+SLA KLT GD
Sbjct: 720 STGFGTSGGLAHRINAQFTPSKNGCCLISVVPRL*PRRCCGSLTSNPLIKSLAEKLTIGD 541
Query: 522 SGNLKGCPTTLNNVALFPEPLNGVLPKRSSYKNMP 626
SGN +G PTTL +VA FP+PL GVLP RS + P
Sbjct: 540 SGNRRG*PTTLKSVARFPDPLKGVLPNRSKHWKDP 436
>gb|CW311717.1|CW311717 104_801_11470377_116_36277_041 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11470377, DNA
sequence
Length = 698
Score = 148 bits (318), Expect(2) = 1e-051
Identities = 54/81 (66%), Positives = 64/81 (79%)
Frame = -3 / -3
Query: 748 PELVAEPTDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGN 569
PELV EP ARS SFVGTHEYLAPE+I G+GHGSAVDWWT G+F+YE+++G+TPFKG N
Sbjct: 606 PELVVEPVSARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFMYEMMYGRTPFKGENN 427
Query: 568 RATLFNVVGQPLRFPESPVVS 506
TL N++ QPL FP V S
Sbjct: 426 EKTLVNIIKQPLAFPRVAVAS 364
Score = 84.5 bits (178), Expect(2) = 1e-023
Identities = 38/70 (54%), Positives = 42/70 (60%)
Frame = +3 / +2
Query: 507 LTTGDSGNLKGCPTTLNNVALFPEPLNGVLPKRSSYKNMPNVHQSTALPCPSPFIISGAK 686
L T G GC L +V PLNGV P SY N P+VHQSTALP P P I SGA+
Sbjct: 365 LATATRGKASGCLMMLTSVFSLFSPLNGVRPYIISYMNTPSVHQSTALPWPCPEITSGAR 544
Query: 687 YSWVPTKDID 716
YS VPT D+D
Sbjct: 545 YSCVPTNDLD 574
Score = 76.7 bits (161), Expect(2) = 1e-051
Identities = 28/55 (50%), Positives = 39/55 (70%)
Frame = -3 / -3
Query: 499 ARDLIRGLLIKEPQHRLAYKRGATEIKQHPFFEGVNWALIRCATPPDIPKPVEIP 335
A+DL+ LL K P+ RL G+ E+K+H FF+GVNWAL+R PP++PKP +P
Sbjct: 336 AQDLMTQLLAKNPKKRLGSCTGSAEVKRHDFFKGVNWALVRSVRPPEVPKPPVVP 172
Score = 46.9 bits (96), Expect(2) = 1e-023
Identities = 24/60 (40%), Positives = 32/60 (53%)
Frame = +3 / +2
Query: 336 GISTGLGISGGVAHLINAQLTPSKNGCCFISVAPRLYANRC*GSLMSNPLIRSLAAKLTT 515
G + GLG SGG L +AQ TP K C F S P +R G L + +IRS A + ++
Sbjct: 173 GTTGGLGTSGGRTDLTSAQFTPLKKSCLFTSADPVQLPSRFLGFLARSWVIRSCARRCSS 352
>gb|CN147606.1|CN147606 WOUND1_50_F12.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_50_F12_A002 5', mRNA sequence
Length = 818
Score = 190 bits (409), Expect(2) = 4e-051
Identities = 76/96 (79%), Positives = 85/96 (88%)
Frame = -3 / +1
Query: 751 LPELVAEPTDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSG 572
LP+LV EPTDARS SFVGTHEYLAPEIIKG+GHGSAVDWWTFG+FLYELL+GKTPF+G G
Sbjct: 529 LPQLVVEPTDARSNSFVGTHEYLAPEIIKGDGHGSAVDWWTFGVFLYELLYGKTPFRGPG 708
Query: 571 NRATLFNVVGQPLRFPESPVVSFAARDLIRGLLIKE 464
N TL NVV Q LRFP++P VS A+DLIRGLL+KE
Sbjct: 709 NDETLANVVSQNLRFPDNPSVSSNAKDLIRGLLVKE 816
Score = 121 bits (259), Expect = 2e-026
Identities = 53/85 (62%), Positives = 62/85 (72%)
Frame = +3 / -1
Query: 462 GSLMSNPLIRSLAAKLTTGDSGNLKGCPTTLNNVALFPEPLNGVLPKRSSYKNMPNVHQS 641
GS S PLIRSLA LT G SGN + C TT NV+ FP PL GVLP +SS + P VHQS
Sbjct: 818 GSFTSKPLIRSLALLLTDGLSGNRRFCETTFANVSSFPGPLKGVLPYKSS*RKTPKVHQS 639
Query: 642 TALPCPSPFIISGAKYSWVPTKDID 716
TALP PSP +ISGA+YS VPTK+++
Sbjct: 638 TALPWPSPLMISGARYSCVPTKELE 564
Score = 33.1 bits (66), Expect(2) = 4e-051
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -3 / +1
Query: 901 CVQPVCIEPACMQPSCVTTTTCFSPR 824
C + CI +C+Q T+CF+PR
Sbjct: 403 CAENYCINSSCLQQPSCAQTSCFTPR 480
>gb|CF485574.1|CF485574 POL1_32_G12.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_32_G12_A002 3', mRNA sequence
Length = 563
Score = 198 bits (427), Expect = 1e-049
Identities = 76/86 (88%), Positives = 83/86 (96%)
Frame = -3 / +2
Query: 589 PFKGSGNRATLFNVVGQPLRFPESPVVSFAARDLIRGLLIKEPQHRLAYKRGATEIKQHP 410
PFKGSGNRATLFNVVGQPLRFPESP+VSF+ARDLIRGLL+K+PQHRL YKRG TEIKQHP
Sbjct: 2 PFKGSGNRATLFNVVGQPLRFPESPIVSFSARDLIRGLLVKDPQHRLGYKRGTTEIKQHP 181
Query: 409 FFEGVNWALIRCATPPDIPKPVEIPR 332
FFEGVNWALIRCA+PPD+PKPVE+ R
Sbjct: 182 FFEGVNWALIRCASPPDVPKPVELDR 259
Score = 143 bits (307), Expect = 4e-033
Identities = 61/86 (70%), Positives = 66/86 (76%)
Frame = +3 / -3
Query: 333 RGISTGLGISGGVAHLINAQLTPSKNGCCFISVAPRLYANRC*GSLMSNPLIRSLAAKLT 512
R STG G SGG+AH INAQ TPSKNGCC ISV PRL RC GSL SNPLI+SLA KLT
Sbjct: 258 RSSSTGFGTSGGLAHRINAQFTPSKNGCCLISVVPRL*PRRCCGSLTSNPLIKSLAEKLT 79
Query: 513 TGDSGNLKGCPTTLNNVALFPEPLNG 590
GDSGN +G PTTL +VA FP+PL G
Sbjct: 78 IGDSGNRRG*PTTLKSVARFPDPLKG 1
>gb|CX613644.1|CX613644 GABR1_9_H06.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_9_H06_A002 3', mRNA sequence
Length = 508
Score = 195 bits (421), Expect = 7e-049
Identities = 77/111 (69%), Positives = 89/111 (80%)
Frame = -3 / +3
Query: 610 ELLFGKTPFKGSGNRATLFNVVGQPLRFPESPVVSFAARDLIRGLLIKEPQHRLAYKRGA 431
E LFGKTPFKG+GNR TLFNV+GQPLRFPE PVVSF ARDLIR L+KEPQ RL +KRGA
Sbjct: 3 EFLFGKTPFKGTGNRGTLFNVIGQPLRFPEYPVVSFPARDLIRSFLVKEPQQRLGFKRGA 182
Query: 430 TEIKQHPFFEGVNWALIRCATPPDIPKPVEIPRSVASSSQKATSAAEKGSD 278
TEIKQHPFFEGVNWALIRCA+PP++P+ +I + + SAA+ G D
Sbjct: 183 TEIKQHPFFEGVNWALIRCASPPEVPRHFDIEKPPKQPVSTSESAAQNGGD 335
Score = 138 bits (296), Expect = 1e-031
Identities = 62/91 (68%), Positives = 67/91 (73%)
Frame = +3 / -1
Query: 339 ISTGLGISGGVAHLINAQLTPSKNGCCFISVAPRLYANRC*GSLMSNPLIRSLAAKLTTG 518
+S LG SGG+A INAQ TPSKNGCCFISVAPRL NRC GSL LI+SLA KLTTG
Sbjct: 274 MSKCLGTSGGLAQRINAQFTPSKNGCCFISVAPRLKPNRCWGSLTRKLLIKSLAGKLTTG 95
Query: 519 DSGNLKGCPTTLNNVALFPEPLNGVLPKRSS 611
SG KG P TLN+V FP PLNGV P R+S
Sbjct: 94 YSGKRKG*PMTLNSVPRFPVPLNGVFPNRNS 2
>gb|BF480784.1|BF480784 FM1_14_H09.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 569
Score = 194 bits (419), Expect = 1e-048
Identities = 75/83 (90%), Positives = 82/83 (98%)
Frame = -3 / +3
Query: 586 FKGSGNRATLFNVVGQPLRFPESPVVSFAARDLIRGLLIKEPQHRLAYKRGATEIKQHPF 407
FKGSGNRATLFNVVGQPLRFPESP+VSF+ARD+IRGLL+K+PQHRL YKRGATEIKQHPF
Sbjct: 3 FKGSGNRATLFNVVGQPLRFPESPIVSFSARDMIRGLLVKDPQHRLGYKRGATEIKQHPF 182
Query: 406 FEGVNWALIRCATPPDIPKPVEI 338
FEGVNWALIRCA+PPDIPKPVE+
Sbjct: 183 FEGVNWALIRCASPPDIPKPVEL 251
Score = 151 bits (324), Expect = 2e-035
Identities = 63/82 (76%), Positives = 68/82 (82%)
Frame = +3 / -2
Query: 342 STGLGISGGVAHLINAQLTPSKNGCCFISVAPRLYANRC*GSLMSNPLIRSLAAKLTTGD 521
STG G+SGG+AHL+ AQ TPSK GCCFISVAPRLY +RC GSL SNPLI SLA KLT GD
Sbjct: 247 STGFGMSGGLAHLMRAQFTPSKKGCCFISVAPRLYPSRCCGSLTSNPLIMSLAEKLTIGD 68
Query: 522 SGNLKGCPTTLNNVALFPEPLN 587
SGNLKG PTTL +VA PEPLN
Sbjct: 67 SGNLKGWPTTLKSVARLPEPLN 2
>gb|CD427064.1|CD427064 SA1_17_G05.b1_A002 Salicylic acid-treated seedlings Sorghum bicolor
cDNA clone SA1_17_G05_A002 3', mRNA sequence
Length = 652
Score = 191 bits (411), Expect = 2e-047
Identities = 77/110 (70%), Positives = 90/110 (81%)
Frame = -3 / +3
Query: 616 LYELLFGKTPFKGSGNRATLFNVVGQPLRFPESPVVSFAARDLIRGLLIKEPQHRLAYKR 437
L+ELL+GKTPFKGSGNRATLFNVVGQ L+FPESP S+++RD IRGLL+KEPQ RL KR
Sbjct: 3 LHELLYGKTPFKGSGNRATLFNVVGQQLKFPESPSTSYSSRDPIRGLLVKEPQSRLGVKR 182
Query: 436 GATEIKQHPFFEGVNWALIRCATPPDIPKPVEIPRSVASSSQKATSAAEK 287
GATEIKQHPFFEGVNWALIRC+TPP++P+PVE V +A + K
Sbjct: 183 GATEIKQHPFFEGVNWALIRCSTPPEVPRPVEAELPVKYGVAEAIGSNSK 332
Score = 128 bits (274), Expect = 1e-028
Identities = 58/97 (59%), Positives = 64/97 (65%)
Frame = +3 / -1
Query: 327 TERGISTGLGISGGVAHLINAQLTPSKNGCCFISVAPRLYANRC*GSLMSNPLIRSLAAK 506
T STGLG SGGV H + AQ TPSK GCC ISVAPR R GSL +PL+ SL
Sbjct: 292 TGSSASTGLGTSGGVLHRMRAQFTPSKKGCCLISVAPRFTPRRLCGSLTRSPLMGSLLE* 113
Query: 507 LTTGDSGNLKGCPTTLNNVALFPEPLNGVLPKRSSYK 617
L GDSGN PTTLN VA FP+PLNGVLP SS++
Sbjct: 112 LVDGDSGNFSC*PTTLNKVARFPDPLNGVLPYSSSWR 2
>gb|CD423436.1|CD423436 SA1_23_C04.b1_A002 Salicylic acid-treated seedlings Sorghum bicolor
cDNA clone SA1_23_C04_A002 3', mRNA sequence
Length = 643
Score = 190 bits (409), Expect = 3e-047
Identities = 73/83 (87%), Positives = 80/83 (96%)
Frame = -3 / +3
Query: 580 GSGNRATLFNVVGQPLRFPESPVVSFAARDLIRGLLIKEPQHRLAYKRGATEIKQHPFFE 401
GSGNRATLFNVVGQPLRFPESP+VSF+ARDLIRGLL+K+PQHRL YKRG TEIKQHPFFE
Sbjct: 3 GSGNRATLFNVVGQPLRFPESPIVSFSARDLIRGLLVKDPQHRLGYKRGTTEIKQHPFFE 182
Query: 400 GVNWALIRCATPPDIPKPVEIPR 332
GVNWALIRCA+PPD+PKPVE+ R
Sbjct: 183 GVNWALIRCASPPDVPKPVELDR 251
Score = 138 bits (297), Expect = 9e-032
Identities = 59/83 (71%), Positives = 64/83 (77%)
Frame = +3 / -1
Query: 333 RGISTGLGISGGVAHLINAQLTPSKNGCCFISVAPRLYANRC*GSLMSNPLIRSLAAKLT 512
R STG G SGG+AH INAQ TPSKNGCC ISV PRL RC GSL SNPLI+SLA KLT
Sbjct: 250 RSSSTGFGTSGGLAHRINAQFTPSKNGCCLISVVPRL*PRRCCGSLTSNPLIKSLAEKLT 71
Query: 513 TGDSGNLKGCPTTLNNVALFPEP 581
GDSGN +G PTTL +VA FP+P
Sbjct: 70 IGDSGNRRG*PTTLKSVARFPDP 2
>gb|BG052508.1|BG052508 RHIZ2_26_A04.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 520
Score = 189 bits (407), Expect = 6e-047
Identities = 76/107 (71%), Positives = 88/107 (82%)
Frame = -3 / +2
Query: 607 LLFGKTPFKGSGNRATLFNVVGQPLRFPESPVVSFAARDLIRGLLIKEPQHRLAYKRGAT 428
LL+GKTPFKGSGNRATLFNVVGQ L+FPESP S+++RDLIRGLL+KEPQ RL KRGAT
Sbjct: 2 LLYGKTPFKGSGNRATLFNVVGQQLKFPESPSTSYSSRDLIRGLLVKEPQSRLGVKRGAT 181
Query: 427 EIKQHPFFEGVNWALIRCATPPDIPKPVEIPRSVASSSQKATSAAEK 287
EIKQHPFFEGVNWALIRC+TPP++P+PVE V +A + K
Sbjct: 182 EIKQHPFFEGVNWALIRCSTPPEVPRPVEAELPVKYGVAEAIGSNSK 322
Score = 127 bits (273), Expect = 2e-028
Identities = 58/94 (61%), Positives = 62/94 (65%)
Frame = +3 / -2
Query: 327 TERGISTGLGISGGVAHLINAQLTPSKNGCCFISVAPRLYANRC*GSLMSNPLIRSLAAK 506
T STGLG SGGV H + AQ TPSK GCC ISVAPR R GSL +PL+RSL
Sbjct: 282 TGSSASTGLGTSGGVLHRMRAQFTPSKKGCCLISVAPRFTPRRLCGSLTRSPLMRSLLE* 103
Query: 507 LTTGDSGNLKGCPTTLNNVALFPEPLNGVLPKRS 608
L GDSGN PTTLN VA FP+PLNGVLP S
Sbjct: 102 LVDGDSGNFSC*PTTLNRVARFPDPLNGVLPYSS 1
>gb|CW403690.1|CW403690 fsbb001f095i13f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f095i13, DNA
sequence
Length = 615
Score = 158 bits (340), Expect(2) = 7e-046
Identities = 63/90 (70%), Positives = 74/90 (82%)
Frame = -3 / -1
Query: 628 FGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPESPVVSFAARDLIRGLLIKEPQHRL 449
FG+FLYELL+GKTPF+G GN TL NVV Q LRFP++P VS A+DLIRGLL+KEP++R
Sbjct: 564 FGVFLYELLYGKTPFRGPGNDETLANVVSQNLRFPDNPSVSSNAKDLIRGLLVKEPENRF 385
Query: 448 AYKRGATEIKQHPFFEGVNWALIRCATPPD 359
RGA EIKQHPFFEG+NWALIR A PP+
Sbjct: 384 GSLRGAAEIKQHPFFEGLNWALIRSAAPPE 295
Score = 106 bits (227), Expect(2) = 3e-026
Identities = 50/90 (55%), Positives = 55/90 (61%)
Frame = +3 / +2
Query: 357 ISGGVAHLINAQLTPSKNGCCFISVAPRLYANRC*GSLMSNPLIRSLAAKLTTGDSGNLK 536
+SGG A I AQ PSK GCC IS AP N GS S PLIRSLA LT G SGN +
Sbjct: 293 VSGGAAERIRAQFNPSKKGCCLISAAPLNDPNLFSGSFTSKPLIRSLALLLTDGLSGNRR 472
Query: 537 GCPTTLNNVALFPEPLNGVLPKRSSYKNMP 626
C TT NV+ FP PL GVLP +SS + P
Sbjct: 473 FCETTFANVSSFPGPLKGVLPYKSS*RKTP 562
Score = 47.3 bits (97), Expect(2) = 7e-046
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = -3 / -3
Query: 676 EIIKGEGHGSAVDWWTF 626
EIIKG+GHGSAVDWWTF
Sbjct: 613 EIIKGDGHGSAVDWWTF 563
Score = 33.1 bits (66), Expect(2) = 3e-026
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = +3 / +3
Query: 630 VHQSTALPCPSPFIIS 677
VHQSTALP PSP +IS
Sbjct: 567 VHQSTALPWPSPLMIS 614
>gb|BE596005.1|BE596005 PI1_51_B03.g1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 644
Score = 182 bits (391), Expect = 9e-045
Identities = 72/125 (57%), Positives = 90/125 (72%)
Frame = -3 / +2
Query: 715 SMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQP 536
S SFVGT EY+APEII G GH SAVDWW GI LYE+L+G TPF+G + T N++ +
Sbjct: 68 SNSFVGTEEYIAPEIITGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQRTFANILHKD 247
Query: 535 LRFPESPVVSFAARDLIRGLLIKEPQHRLAYKRGATEIKQHPFFEGVNWALIRCATPPDI 356
+RFP S VS AAR LI LL ++P +RL GA EIKQHPFF G+NWAL+R ATPP++
Sbjct: 248 IRFPASIQVSLAARQLIYRLLHRDPANRLGSYEGAIEIKQHPFFRGINWALVRAATPPEL 427
Query: 355 PKPVE 341
P++
Sbjct: 428 EAPLQ 442
Score = 115 bits (246), Expect = 9e-025
Identities = 60/123 (48%), Positives = 69/123 (56%)
Frame = +3 / -3
Query: 348 GLGISGGVAHLINAQLTPSKNGCCFISVAPRLYANRC*GSLMSNPLIRSLAAKLTTGDSG 527
G SGGVA AQ P K GCC IS+AP + GS SN I LAA+LT +G
Sbjct: 435 GASNSGGVAARTRAQFMPRKKGCCLISIAPS*EPSLFAGSRCSNLYINCLAARLT*MLAG 256
Query: 528 NLKGCPTTLNNVALFPEPLNGVLPKRSSYKNMPNVHQSTALPCPSPFIISGAKYSWVPTK 707
NL L V PL GV P SY+ +P+ HQSTAL P+P IISGA YS VPTK
Sbjct: 255 NLISLCRILAKVLCLVFPLKGV*PYNISYRRIPSAHQSTALVWPAPVIISGAMYSSVPTK 76
Query: 708 DID 716
+ D
Sbjct: 75 EFD 67
>gb|BM329541.1|BM329541 PIC1_39_D08.g1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 657
Score = 182 bits (391), Expect = 9e-045
Identities = 72/125 (57%), Positives = 90/125 (72%)
Frame = -3 / +3
Query: 715 SMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQP 536
S SFVGT EY+APEII G GH SAVDWW GI LYE+L+G TPF+G + T N++ +
Sbjct: 45 SNSFVGTEEYIAPEIITGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQRTFANILHKD 224
Query: 535 LRFPESPVVSFAARDLIRGLLIKEPQHRLAYKRGATEIKQHPFFEGVNWALIRCATPPDI 356
+RFP S VS AAR LI LL ++P +RL GA EIKQHPFF G+NWAL+R ATPP++
Sbjct: 225 IRFPASIQVSLAARQLIYRLLHRDPANRLGSYEGAIEIKQHPFFRGINWALVRAATPPEL 404
Query: 355 PKPVE 341
P++
Sbjct: 405 EAPLQ 419
Score = 115 bits (246), Expect = 9e-025
Identities = 60/123 (48%), Positives = 69/123 (56%)
Frame = +3 / -3
Query: 348 GLGISGGVAHLINAQLTPSKNGCCFISVAPRLYANRC*GSLMSNPLIRSLAAKLTTGDSG 527
G SGGVA AQ P K GCC IS+AP + GS SN I LAA+LT +G
Sbjct: 412 GASNSGGVAARTRAQFMPRKKGCCLISIAPS*EPSLFAGSRCSNLYINCLAARLT*MLAG 233
Query: 528 NLKGCPTTLNNVALFPEPLNGVLPKRSSYKNMPNVHQSTALPCPSPFIISGAKYSWVPTK 707
NL L V PL GV P SY+ +P+ HQSTAL P+P IISGA YS VPTK
Sbjct: 232 NLISLCRILAKVLCLVFPLKGV*PYNISYRRIPSAHQSTALVWPAPVIISGAMYSSVPTK 53
Query: 708 DID 716
+ D
Sbjct: 52 EFD 44
>gb|CD462204.1|CD462204 SA1_40_B09.b1_A002 Salicylic acid-treated seedlings Sorghum bicolor
cDNA clone SA1_40_B09_A002 3', mRNA sequence
Length = 674
Score = 182 bits (391), Expect = 9e-045
Identities = 72/125 (57%), Positives = 90/125 (72%)
Frame = -3 / +3
Query: 715 SMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQP 536
S SFVGT EY+APEII G GH SAVDWW GI LYE+L+G TPF+G + T N++ +
Sbjct: 81 SNSFVGTEEYIAPEIITGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQRTFANILHKD 260
Query: 535 LRFPESPVVSFAARDLIRGLLIKEPQHRLAYKRGATEIKQHPFFEGVNWALIRCATPPDI 356
+RFP S VS AAR LI LL ++P +RL GA EIKQHPFF G+NWAL+R ATPP++
Sbjct: 261 IRFPASIQVSLAARQLIYRLLHRDPANRLGSYEGAIEIKQHPFFRGINWALVRAATPPEL 440
Query: 355 PKPVE 341
P++
Sbjct: 441 EAPLQ 455
Score = 115 bits (246), Expect = 9e-025
Identities = 60/123 (48%), Positives = 69/123 (56%)
Frame = +3 / -2
Query: 348 GLGISGGVAHLINAQLTPSKNGCCFISVAPRLYANRC*GSLMSNPLIRSLAAKLTTGDSG 527
G SGGVA AQ P K GCC IS+AP + GS SN I LAA+LT +G
Sbjct: 448 GASNSGGVAARTRAQFMPRKKGCCLISIAPS*EPSLFAGSRCSNLYINCLAARLT*MLAG 269
Query: 528 NLKGCPTTLNNVALFPEPLNGVLPKRSSYKNMPNVHQSTALPCPSPFIISGAKYSWVPTK 707
NL L V PL GV P SY+ +P+ HQSTAL P+P IISGA YS VPTK
Sbjct: 268 NLISLCRILAKVLCLVFPLKGV*PYNISYRRIPSAHQSTALVWPAPVIISGAMYSSVPTK 89
Query: 708 DID 716
+ D
Sbjct: 88 EFD 80
>gb|CW088288.1|CW088288 104_433_10948097_114_32572_075 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10948097, DNA
sequence
Length = 640
Score = 122 bits (262), Expect(2) = 8e-044
Identities = 44/75 (58%), Positives = 57/75 (76%)
Frame = -3 / -1
Query: 745 ELVAEPTDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNR 566
E VAEPT A S VGTHEYLAPE++ G GHG+ VDWW FG+FLYEL++G+TPFKG
Sbjct: 478 EFVAEPTAASSKDCVGTHEYLAPELVSGSGHGNGVDWWAFGVFLYELVYGRTPFKGHTKE 299
Query: 565 ATLFNVVGQPLRFPE 521
ATL N++ + + +P+
Sbjct: 298 ATLKNILSKQVTYPQ 254
Score = 76.2 bits (160), Expect(2) = 8e-044
Identities = 28/48 (58%), Positives = 36/48 (75%)
Frame = -3 / -1
Query: 496 RDLIRGLLIKEPQHRLAYKRGATEIKQHPFFEGVNWALIRCATPPDIP 353
RDL+ LL ++P+ R+ RGA EIK+HPFF GV+WALIRC PP +P
Sbjct: 223 RDLVGRLLERDPRRRMGATRGAAEIKRHPFFAGVDWALIRCVAPPVVP 80
>gb|CW088290.1|CW088290 104_433_10948097_250_32620_075 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10948097, DNA
sequence
Length = 612
Score = 122 bits (262), Expect(2) = 8e-044
Identities = 44/75 (58%), Positives = 57/75 (76%)
Frame = -3 / -3
Query: 745 ELVAEPTDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNR 566
E VAEPT A S VGTHEYLAPE++ G GHG+ VDWW FG+FLYEL++G+TPFKG
Sbjct: 451 EFVAEPTAASSKDCVGTHEYLAPELVSGSGHGNGVDWWAFGVFLYELVYGRTPFKGHTKE 272
Query: 565 ATLFNVVGQPLRFPE 521
ATL N++ + + +P+
Sbjct: 271 ATLKNILSKQVTYPQ 227
Score = 76.2 bits (160), Expect(2) = 8e-044
Identities = 28/48 (58%), Positives = 36/48 (75%)
Frame = -3 / -3
Query: 496 RDLIRGLLIKEPQHRLAYKRGATEIKQHPFFEGVNWALIRCATPPDIP 353
RDL+ LL ++P+ R+ RGA EIK+HPFF GV+WALIRC PP +P
Sbjct: 196 RDLVGRLLERDPRRRMGATRGAAEIKRHPFFAGVDWALIRCVAPPVVP 53
>gb|AW679681.1|AW679681 WS1_30_E12.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 637
Score = 176 bits (378), Expect = 6e-043
Identities = 67/77 (87%), Positives = 74/77 (96%)
Frame = -3 / +3
Query: 562 TLFNVVGQPLRFPESPVVSFAARDLIRGLLIKEPQHRLAYKRGATEIKQHPFFEGVNWAL 383
TLFNVVGQPLRFPESP+VSF+ARDLIRGLL+K+PQHRL YKRG TEIKQHPFFEGVNWAL
Sbjct: 3 TLFNVVGQPLRFPESPIVSFSARDLIRGLLVKDPQHRLGYKRGTTEIKQHPFFEGVNWAL 182
Query: 382 IRCATPPDIPKPVEIPR 332
IRCA+PPD+PKPVE+ R
Sbjct: 183 IRCASPPDVPKPVELDR 233
Score = 127 bits (273), Expect = 2e-028
Identities = 55/77 (71%), Positives = 59/77 (76%)
Frame = +3 / -1
Query: 333 RGISTGLGISGGVAHLINAQLTPSKNGCCFISVAPRLYANRC*GSLMSNPLIRSLAAKLT 512
R STG G SGG+AH INAQ TPSKNGCC ISV PRL RC GSL SNPLI+SLA KLT
Sbjct: 232 RSSSTGFGTSGGLAHRINAQFTPSKNGCCLISVVPRL*PRRCCGSLTSNPLIKSLAEKLT 53
Query: 513 TGDSGNLKGCPTTLNNV 563
GDSGN +G PTTL +V
Sbjct: 52 IGDSGNRRG*PTTLKSV 2
>gb|BG053517.1|BG053517 RHIZ2_10_B08.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 515
Score = 173 bits (372), Expect = 4e-042
Identities = 66/74 (89%), Positives = 73/74 (98%)
Frame = -3 / +2
Query: 559 LFNVVGQPLRFPESPVVSFAARDLIRGLLIKEPQHRLAYKRGATEIKQHPFFEGVNWALI 380
LFNVVGQPLRFPESP+VSF+ARD+IRGLL+K+PQHRL YKRGATEIKQHPFFEGVNWALI
Sbjct: 2 LFNVVGQPLRFPESPIVSFSARDMIRGLLVKDPQHRLGYKRGATEIKQHPFFEGVNWALI 181
Query: 379 RCATPPDIPKPVEI 338
RCA+PPDIPKPVE+
Sbjct: 182 RCASPPDIPKPVEL 223
Score = 135 bits (289), Expect = 1e-030
Identities = 56/73 (76%), Positives = 61/73 (83%)
Frame = +3 / -3
Query: 342 STGLGISGGVAHLINAQLTPSKNGCCFISVAPRLYANRC*GSLMSNPLIRSLAAKLTTGD 521
STG G+SGG+AHL+ AQ TPSK GCCFISVAPRLY +RC GSL SNPLI SLA KLT GD
Sbjct: 219 STGFGMSGGLAHLMRAQFTPSKKGCCFISVAPRLYPSRCCGSLTSNPLIMSLAEKLTIGD 40
Query: 522 SGNLKGCPTTLNN 560
SGNLKG PTTL +
Sbjct: 39 SGNLKGWPTTLKS 1
>gb|CW280288.1|CW280288 104_755_11407540_148_35446_008 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11407540, DNA
sequence
Length = 652
Score = 167 bits (359), Expect = 2e-040
Identities = 66/74 (89%), Positives = 68/74 (91%)
Frame = -3 / +3
Query: 745 ELVAEPTDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNR 566
E AEPT ARSMSFVGTHEYLAPEII+G+GHGSAVDWWTFGIFLYELL G TPFKGSGNR
Sbjct: 426 EFTAEPTSARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFLYELLHGATPFKGSGNR 605
Query: 565 ATLFNVVGQPLRFP 524
ATLFNVV QPLRFP
Sbjct: 606 ATLFNVVAQPLRFP 647
Score = 113 bits (242), Expect = 3e-024
Identities = 46/64 (71%), Positives = 51/64 (79%)
Frame = +3 / -1
Query: 525 GNLKGCPTTLNNVALFPEPLNGVLPKRSSYKNMPNVHQSTALPCPSPFIISGAKYSWVPT 704
GNL GC TTL +VA FPEPL GV P RSS + MP VHQSTALP PSP +ISGA+YSWVPT
Sbjct: 646 GNLSGCATTLKSVARFPEPLKGVAPCRSS*RKMPKVHQSTALPWPSPRMISGARYSWVPT 467
Query: 705 KDID 716
D+D
Sbjct: 466 NDMD 455
>gb|CW363767.1|CW363767 fsbb001f035i09f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f035i09, DNA
sequence
Length = 650
Score = 163 bits (350), Expect = 4e-039
Identities = 68/105 (64%), Positives = 79/105 (75%)
Frame = -3 / -2
Query: 598 GKTPFKGSGNRATLFNVVGQPLRFPESPVVSFAARDLIRGLLIKEPQHRLAYKRGATEIK 419
G TPFKGSGNRATLFNVV QPLRFP++P VS AARDLIRGLL KEP +RLA +RGA E+K
Sbjct: 646 GATPFKGSGNRATLFNVVAQPLRFPDAPAVSAAARDLIRGLLAKEPHNRLASRRGAAEVK 467
Query: 418 QHPFFEGVNWALIRCATPPDIPKPVEIPRSVASSSQKATSAAEKG 284
QHPFFEGVNWAL+R A PP IP + + + +AA +G
Sbjct: 466 QHPFFEGVNWALVRSAQPPYIPDAAAVDHCSSQFAFSDGAAAAQG 332
Score = 120 bits (256), Expect = 4e-026
Identities = 54/82 (65%), Positives = 59/82 (71%)
Frame = +3 / +3
Query: 354 GISGGVAHLINAQLTPSKNGCCFISVAPRLYANRC*GSLMSNPLIRSLAAKLTTGDSGNL 533
G+ GG A L +AQLTPSK GCCF S APR A+R GSL S P +RSLAA LT G SGNL
Sbjct: 402 GM*GGWALLTSAQLTPSKKGCCFTSAAPRRDASRLCGSLASRPRMRSLAAALTAGASGNL 581
Query: 534 KGCPTTLNNVALFPEPLNGVLP 599
GC TTL +VA FPEPL GV P
Sbjct: 582 SGCATTLKSVARFPEPLKGVAP 647
>gb|CW368244.1|CW368244 fsbb001f042b22k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f042b22, DNA
sequence
Length = 403
Score = 163 bits (350), Expect = 4e-039
Identities = 65/90 (72%), Positives = 74/90 (82%)
Frame = -3 / -2
Query: 610 ELLFGKTPFKGSGNRATLFNVVGQPLRFPESPVVSFAARDLIRGLLIKEPQHRLAYKRGA 431
EL++GK PFKG RATLFNVVGQ L+FP+ P S A+RDLI+GLL KEPQ RL KRGA
Sbjct: 402 ELMYGKPPFKGQTTRATLFNVVGQQLKFPDCPGTSNASRDLIKGLLAKEPQSRLGVKRGA 223
Query: 430 TEIKQHPFFEGVNWALIRCATPPDIPKPVE 341
EIKQHPFFEGVNWALIRC+TPP +P+ VE
Sbjct: 222 AEIKQHPFFEGVNWALIRCSTPPGVPRAVE 133
Score = 128 bits (274), Expect = 1e-028
Identities = 59/90 (65%), Positives = 63/90 (70%)
Frame = +3 / +2
Query: 342 STGLGISGGVAHLINAQLTPSKNGCCFISVAPRLYANRC*GSLMSNPLIRSLAAKLTTGD 521
ST LG GGV H I+AQLTPSK GCCFIS APRL +R GSL S PL+RSL A L G
Sbjct: 134 STALGTPGGVLHRISAQLTPSKKGCCFISAAPRLTPSRLWGSLASRPLMRSLLALLVPGQ 313
Query: 522 SGNLKGCPTTLNNVALFPEPLNGVLPKRSS 611
SGNL CPTTLN+VA PLNG LP SS
Sbjct: 314 SGNLSCCPTTLNSVARVVCPLNGGLPYMSS 403
>gb|BM330114.1|BM330114 PIC1_47_C12.g1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 606
Score = 157 bits (337), Expect = 3e-037
Identities = 62/111 (55%), Positives = 78/111 (70%)
Frame = -3 / +3
Query: 676 EIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPESPVVSFAA 497
EII G GH SAVDWW GI LYE+L+G TPF+G + T N++ + +RFP S VS AA
Sbjct: 33 EIITGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQRTFANILHKDIRFPASIQVSLAA 212
Query: 496 RDLIRGLLIKEPQHRLAYKRGATEIKQHPFFEGVNWALIRCATPPDIPKPV 344
R LI LL ++P +RL GA EIKQHPFF G+NWAL+R ATPP++ P+
Sbjct: 213 RQLIYRLLHRDPANRLGSYEGAIEIKQHPFFRGINWALVRAATPPELEAPL 365
>gb|CW430454.1|CW430454 fsbb001f144c20f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f144c20, DNA
sequence
Length = 611
Score = 154 bits (331), Expect = 2e-036
Identities = 62/92 (67%), Positives = 73/92 (79%)
Frame = -3 / +1
Query: 562 TLFNVVGQPLRFPESPVVSFAARDLIRGLLIKEPQHRLAYKRGATEIKQHPFFEGVNWAL 383
TLFNVVGQ L+FPESP S+++RDLIRGLL+KEPQ RL KRGATEIKQHPFFEGVNWAL
Sbjct: 1 TLFNVVGQQLKFPESPSTSYSSRDLIRGLLVKEPQSRLGVKRGATEIKQHPFFEGVNWAL 180
Query: 382 IRCATPPDIPKPVEIPRSVASSSQKATSAAEK 287
IRC+TPP++P+PVE V +A + K
Sbjct: 181 IRCSTPPEVPRPVEAELPVKYGVAEAIGSNSK 276
>gb|BM329226.1|BM329226 PIC1_35_A07.g1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 553
Score = 150 bits (322), Expect = 3e-035
Identities = 58/106 (54%), Positives = 75/106 (70%)
Frame = -3 / +2
Query: 658 GHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPESPVVSFAARDLIRG 479
GH SAVDWW GI LYE+L+G TPF+G + T N++ + +RFP S VS AAR LI
Sbjct: 2 GHTSAVDWWALGILLYEMLYGYTPFRGKTRQRTFANILHKDIRFPASIQVSLAARQLIYR 181
Query: 478 LLIKEPQHRLAYKRGATEIKQHPFFEGVNWALIRCATPPDIPKPVE 341
LL ++P +RL GA EIKQHPFF G+NWAL+R ATPP++ P++
Sbjct: 182 LLHRDPANRLGSYEGAIEIKQHPFFRGINWALVRAATPPELEAPLQ 319
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,181,508,446
Number of Sequences: 832831
Number of extensions: 17261513
Number of successful extensions: 101302
Number of sequences better than 1.0e-020: 76
length of database: 163,786,556
effective HSP length: 55
effective length of database: 117,980,851
effective search space used: 30203097856
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)