TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 1716323.2.1
(724 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CN134916.1|CN134916 OX1_29_H04.b1_A002 Oxidatively-stres... 333 2e-090
gb|CF760165.1|CF760165 DSAF1_56_C09.b1_A011 Drought-stresse... 308 6e-083
gb|CN127673.1|CN127673 RHOH1_24_H12.b1_A002 Acid- and alkal... 230 2e-059
gb|BZ350862.1|BZ350862 ht61f07.g1 WGS-SbicolorF (JM107 adap... 107 6e-054
gb|CF758077.1|CF758077 DSAF1_27_A03.g1_A011 Drought-stresse... 206 2e-052
gb|BE362940.2|BE362940 DG1_91_B11.g1_A002 Dark Grown 1 (DG1... 195 5e-049
gb|CX613435.1|CX613435 GABR1_8_D10.b1_A002 GA- or brassinol... 193 3e-048
gb|CN129079.1|CN129079 RHOH1_33_H09.b3_A002 Acid- and alkal... 191 9e-048
gb|CX606247.1|CX606247 ANR1_2_A04.b1_A002 Anaerobic roots S... 141 9e-045
gb|BI211898.1|BI211898 IP1_62_G05.g1_A002 Immature pannicle... 181 1e-044
gb|CW146571.1|CW146571 104_539_11139064_116_34991_056 Sorgh... 91 4e-044
gb|CW128046.1|CW128046 104_509_11113781_116_34744_023 Sorgh... 106 1e-040
gb|CW078695.1|CW078695 104_396_10898313_114_31923_153 Sorgh... 104 7e-040
gb|BZ629316.1|BZ629316 ih65e07.b1 WGS-SbicolorF (DH5a methy... 104 7e-040
gb|CN129749.1|CN129749 RHOH1_37_E03.b1_A002 Acid- and alkal... 100 2e-039
gb|CD429206.1|CD429206 ETH1_3_C09.b1_A002 Ethylene-treated ... 100 2e-039
gb|CD229384.1|CD229384 CCC1_15_E01.b1_A007 Callus culture/c... 100 2e-039
gb|BE359084.1|BE359084 DG1_38_H02.g1_A002 Dark Grown 1 (DG1... 162 6e-039
gb|CN145355.1|CN145355 WOUND1_28_A03.g1_A002 Wounded leaves... 159 4e-038
gb|CW194292.1|CW194292 104_617_11180020_148_36790_008 Sorgh... 106 5e-038
gb|CF429879.1|CF429879 PH1_25_E11.b1_A002 Phosphorous-defic... 149 6e-035
gb|CD232716.1|CD232716 SS1_1_H12.b1_A012 Salt-stressed seed... 148 1e-034
gb|BE597274.1|BE597274 PI1_70_C05.g1_A002 Pathogen induced ... 99 8e-034
gb|CW073480.1|CW073480 104_335_10779929_114_31363_329 Sorgh... 94 2e-033
gb|CL190993.1|CL190993 104_409_10906471_114_32488_022 Sorgh... 112 5e-033
gb|CW331181.1|CW331181 104_828_11480770_148_36025_041 Sorgh... 112 5e-033
gb|CW134050.1|CW134050 104_518_11117099_148_34816_046 Sorgh... 111 6e-032
gb|CD235658.1|CD235658 SS1_37_F06.b1_A012 Salt-stressed see... 136 3e-031
gb|CF757766.1|CF757766 DSAF1_22_A08.g1_A011 Drought-stresse... 136 3e-031
gb|CW493569.1|CW493569 fsbb001f284g08f0 Sorghum methylation... 80 7e-030
gb|CN139882.1|CN139882 OX1_24_E09.g1_A002 Oxidatively-stres... 98 2e-028
gb|CW327532.1|CW327532 104_823_11478800_116_35982_028 Sorgh... 63 3e-027
gb|CN152126.1|CN152126 WOUND1_80_A04.b1_A002 Wounded leaves... 123 3e-027
gb|CW029877.1|CW029877 104_257_10499927_116_30402 Sorghum m... 63 4e-027
gb|CW345534.1|CW345534 104_848_11488543_148_36210_022 Sorgh... 102 2e-026
gb|CD424257.1|CD424257 SA1_4_H11.b1_A002 Salicylic acid-tre... 119 4e-026
gb|CW208270.1|CW208270 104_637_11188585_116_37043_003 Sorgh... 81 6e-026
gb|CW445621.1|CW445621 fsbb001f170n20k0 Sorghum methylation... 63 1e-025
gb|CW071495.1|CW071495 104_323_10591543_114_30471 Sorghum m... 113 2e-024
gb|CW077966.1|CW077966 104_386_10894698_116_31912_378 Sorgh... 113 2e-024
gb|CW077967.1|CW077967 104_386_10894698_148_31911_378 Sorgh... 113 2e-024
gb|CW271688.1|CW271688 104_744_11403133_116_36221_063 Sorgh... 57 6e-024
gb|CW220527.1|CW220527 104_655_11197397_116_37153_027 Sorgh... 55 8e-023
gb|CW311232.1|CW311232 104_800_11470125_148_35757_085 Sorgh... 55 8e-023
gb|CW194265.1|CW194265 104_617_11180005_148_36791_057 Sorgh... 55 9e-023
gb|CW271687.1|CW271687 104_744_11403133_116_35346_063 Sorgh... 51 3e-022
gb|CW034153.1|CW034153 104_264_10502381_115_30380 Sorghum m... 79 4e-022
gb|CF432526.1|CF432526 NIT1_17_E08.b1_A002 Nitrogen-deficie... 106 4e-022
gb|CW304120.1|CW304120 104_788_11465610_148_35698_065 Sorgh... 64 9e-022
gb|CW362994.1|CW362994 fsbb001f034f02k0 Sorghum methylation... 104 1e-021
gb|CL190994.1|CL190994 104_409_10906471_116_32496_022 Sorgh... 103 3e-021
gb|CW327563.1|CW327563 104_823_11478815_148_35980_092 Sorgh... 63 7e-021
gb|CW086531.1|CW086531 104_430_10947042_116_33018_071 Sorgh... 63 7e-021
gb|CW327562.1|CW327562 104_823_11478815_116_35979_092 Sorgh... 63 7e-021
gb|CW380206.1|CW380206 fsbb001f059o07f0 Sorghum methylation... 78 9e-021
>gb|CN134916.1|CN134916 OX1_29_H04.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_29_H04_A002 3', mRNA sequence
Length = 737
Score = 333 bits (721), Expect = 2e-090
Identities = 144/170 (84%), Positives = 150/170 (88%)
Frame = +3 / +1
Query: 78 MIFSGYVGDDEATAATVDSEGWLKTGXXXYFNEDGLLYIVDRLKELIKYKGYQVPPAELE 257
++ GYVGDDEATAATVDSEGWLKTG YFNEDG LYIVDRLKELIKYKGYQVPPAEL
Sbjct: 4 VVMKGYVGDDEATAATVDSEGWLKTGDLCYFNEDGFLYIVDRLKELIKYKGYQVPPAELG 183
Query: 258 HILNSHPDIMDAAVIPYPDEDAGQLPMAFIVRKPGSNLTEQQVMDFVAKQVAPYKKVRRV 437
HILNSHPDIMDAAVIPYPDED GQLPMAFIVRKPGSNLT+QQVMDFVAKQVAPYKKVRRV
Sbjct: 184 HILNSHPDIMDAAVIPYPDEDVGQLPMAFIVRKPGSNLTKQQVMDFVAKQVAPYKKVRRV 363
Query: 438 AFVSAIPKSPAGKILRRELVEQAVSMGTSKL*SLKFILTSKSRRKFSPTP 587
AFVSAIPKSPAGKILRRELVEQAVSM TSKL*SL S+ ++ P
Sbjct: 364 AFVSAIPKSPAGKILRRELVEQAVSMVTSKL*SLLLTWKSRGFLLYNTRP 513
Score = 326 bits (707), Expect = 2e-088
Identities = 129/149 (86%), Positives = 136/149 (91%)
Frame = -3 / -3
Query: 536 TSKLGGTHGHGLLYKLPPQDLPSRRFGDCRNKGHSTNFLVGCDLFSHEIHDLLLGKV*PW 357
TSKLGG HGHGLLYKLPPQDLPSRRFG+CRNKGHST+FLV CDLFSHEIHDLLLGKV* W
Sbjct: 462 TSKLGGNHGHGLLYKLPPQDLPSRRFGNCRNKGHSTDFLVRCDLFSHEIHDLLLGKV*AW 283
Query: 356 FPHYKSHWELPGVFVWIRNNCCVHDIRMRIQDMLQFGRRYLISLVLYQLFQPINNVE*PI 177
FPHYKSHW LP +FVW+RNNCC+HDIRMRIQDM QFG RYLISLV YQLFQPINNVE PI
Sbjct: 282 FPHYKSHW*LPDIFVWVRNNCCIHDIRMRIQDMPQFGWRYLISLVFYQLFQPINNVEKPI 103
Query: 176 LVEVAXXTGFQPAF*IHCCCSSLVVTDIT 90
L+EVA T FQPAF*I+CCCSSLVVT IT
Sbjct: 102 LIEVA*VTSFQPAF*INCCCSSLVVTHIT 16
Score = 249 bits (538), Expect = 4e-065
Identities = 110/139 (79%), Positives = 113/139 (81%)
Frame = -1 / -1
Query: 556 DVSINFKLQSLEVPMDTACSTSSRRKIFPAGDLGIAETKATRRTFL*GATCLATKSMTCC 377
D ++ KLQSLEV MDTACSTSSRRKIFPAGDLGIAETKATRRTFL GATCLATKSMTCC
Sbjct: 482 DFQVSNKLQSLEVTMDTACSTSSRRKIFPAGDLGIAETKATRRTFLYGATCLATKSMTCC 303
Query: 376 SVRFDPGFLTIKAIGSCPXXXXXXXXXXXXXXXG*EFRICSSSAGGT*YPLYFINSFNRS 197
VRF+PGFLTIKAIGSCP G*EFRIC SSAGGT*YPLYFINSFNRS
Sbjct: 302 LVRFEPGFLTIKAIGSCPTSSSGYGITAASMISG*EFRICPSSAGGT*YPLYFINSFNRS 123
Query: 196 TM*SNPSSLK*XXXPVFNQ 140
TM* NPSSLK* PVFNQ
Sbjct: 122 TM*RNPSSLK*HRSPVFNQ 66
Score = 210 bits (453), Expect(2) = 2e-054
Identities = 95/125 (76%), Positives = 98/125 (78%)
Frame = +1 / +2
Query: 88 QVMSVTTRLLQQQWIQKAG*KPVXXATSTRMGYSTLLIG*KS**STRDIRYLLPNWXXXX 267
+VM VTTRLLQQQ IQKAG*K V ATS RMG+STLLIG*KS**+TRDIRYL PNW
Sbjct: 14 KVMWVTTRLLQQQLIQKAG*KLVTYATSMRMGFSTLLIG*KS**NTRDIRYLQPNWGIS* 193
Query: 268 XXXXXXWTQQLFLIQTKTPGNSQWLL**GNQGQTLPSNKSWISWLNRSHPTRKFVEWPLF 447
W QQLF QTK GN QWLL**GNQ QTLPSNKSWISWLNRSH TRK VEWPLF
Sbjct: 194 ILILISWMQQLFRTQTKMSGNYQWLL**GNQAQTLPSNKSWISWLNRSHRTRKSVEWPLF 373
Query: 448 LQSPN 462
LQ PN
Sbjct: 374 LQFPN 388
Score = 164 bits (353), Expect(2) = 7e-069
Identities = 65/71 (91%), Positives = 68/71 (95%)
Frame = +2 / +3
Query: 326 ATPNGFYSEETRVKPYRATSHGFRG*TGRTLQESSSSGLCFCNPQIACWEDLAAGACRAG 505
AT NGFYSEETR+KPY+ATSHGFRG*TGRT+QES SSGLCFCN QIACWEDLAAGACRAG
Sbjct: 252 ATTNGFYSEETRLKPYQATSHGFRG*TGRTVQESPSSGLCFCNSQIACWEDLAAGACRAG 431
Query: 506 RVHGYLQALKF 538
RVHGYLQALKF
Sbjct: 432 RVHGYLQALKF 464
Score = 119 bits (254), Expect(2) = 9e-048
Identities = 57/80 (71%), Positives = 59/80 (73%)
Frame = -2 / -2
Query: 378 AR*GLTLVSSL*KPLGVAXXXXXXXXXXXRP*YQDENSGYAPVRQEVPDIPCTLSTLSTD 199
A *GL+LVSSL*KPL VA P*YQDENSGYAPVR EVPDIPC LSTLSTD
Sbjct: 304 AW*GLSLVSSL*KPLVVARHLRLGTE*LLHP*YQDENSGYAPVRLEVPDIPCILSTLSTD 125
Query: 198 QQCRVTHPR*SSXXXRFSTS 139
QQCR THP *SS +FSTS
Sbjct: 124 QQCRETHPH*SSIGHQFSTS 65
Score = 117 bits (251), Expect(2) = 7e-069
Identities = 51/61 (83%), Positives = 53/61 (86%)
Frame = +2 / +3
Query: 89 RLCR*RRGYCSNSGFRRLVENRXXXLLQRGWVTLHC*SVERVDKVQGISGTSCRTGAYPE 268
RLC *RRGYCSNS FRRLVEN LLQ GWV+LHC*SVERVDK+QGISGTS RTGAYPE
Sbjct: 15 RLCG*RRGYCSNS*FRRLVENW*PMLLQ*GWVSLHC*SVERVDKIQGISGTSSRTGAYPE 194
Query: 269 F 271
F
Sbjct: 195 F 197
Score = 92.7 bits (196), Expect(2) = 9e-048
Identities = 37/40 (92%), Positives = 37/40 (92%)
Frame = -2 / -2
Query: 537 NFKAWRYPWTRPALQAPAARSSQQAIWGLQKQRPLDELSC 418
NFKAWR PWTRPALQAPAARSSQQAIW LQKQRPLD LSC
Sbjct: 463 NFKAWR*PWTRPALQAPAARSSQQAIWELQKQRPLDGLSC 344
Score = 23.5 bits (45), Expect(2) = 2e-054
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = +1 / +2
Query: 514 WVPPSFEV 537
W+PPSFEV
Sbjct: 440 WLPPSFEV 463
>gb|CF760165.1|CF760165 DSAF1_56_C09.b1_A011 Drought-stressed after flowering Sorghum
bicolor cDNA clone DSAF1_56_C09_A011 5', mRNA sequence
Length = 564
Score = 308 bits (667), Expect = 6e-083
Identities = 134/155 (86%), Positives = 138/155 (89%)
Frame = +3 / +1
Query: 123 TVDSEGWLKTGXXXYFNEDGLLYIVDRLKELIKYKGYQVPPAELEHILNSHPDIMDAAVI 302
TVDSEGWLKTG YFNEDG LYIVDRLKELIKYKGYQVPPAELEHILNSHPDIMDAAVI
Sbjct: 1 TVDSEGWLKTGDLCYFNEDGFLYIVDRLKELIKYKGYQVPPAELEHILNSHPDIMDAAVI 180
Query: 303 PYPDEDAGQLPMAFIVRKPGSNLTEQQVMDFVAKQVAPYKKVRRVAFVSAIPKSPAGKIL 482
PYPDED GQLPMAFIVRKPGSNLT+QQVMDFVAKQVAPYKKVRRVAFVSAIPKSPAGKIL
Sbjct: 181 PYPDEDVGQLPMAFIVRKPGSNLTKQQVMDFVAKQVAPYKKVRRVAFVSAIPKSPAGKIL 360
Query: 483 RRELVEQAVSMGTSKL*SLKFILTSKSRRKFSPTP 587
RRELVEQAVSM TSKL*SL S+ ++ P
Sbjct: 361 RRELVEQAVSMVTSKL*SLLLAWKSRGFLLYNTRP 465
Score = 306 bits (663), Expect = 2e-082
Identities = 120/138 (86%), Positives = 127/138 (92%)
Frame = -3 / -1
Query: 536 TSKLGGTHGHGLLYKLPPQDLPSRRFGDCRNKGHSTNFLVGCDLFSHEIHDLLLGKV*PW 357
TSKLGG HGHGLLYKLPPQDLPSRRFG+CRNKGHST+FLV CDLFSHEIHDLLLGKV* W
Sbjct: 414 TSKLGGNHGHGLLYKLPPQDLPSRRFGNCRNKGHSTDFLVRCDLFSHEIHDLLLGKV*AW 235
Query: 356 FPHYKSHWELPGVFVWIRNNCCVHDIRMRIQDMLQFGRRYLISLVLYQLFQPINNVE*PI 177
FPHYKSHW LP +FVW+RNNCC+HDIRMRIQDMLQFG RYLISLV YQLFQPINNVE PI
Sbjct: 234 FPHYKSHW*LPDIFVWVRNNCCIHDIRMRIQDMLQFGWRYLISLVFYQLFQPINNVEKPI 55
Query: 176 LVEVAXXTGFQPAF*IHC 123
L+EVA T FQPAF*I+C
Sbjct: 54 LIEVA*VTSFQPAF*INC 1
Score = 249 bits (539), Expect = 3e-065
Identities = 111/139 (79%), Positives = 113/139 (81%)
Frame = -1 / -2
Query: 556 DVSINFKLQSLEVPMDTACSTSSRRKIFPAGDLGIAETKATRRTFL*GATCLATKSMTCC 377
D + KLQSLEV MDTACSTSSRRKIFPAGDLGIAETKATRRTFL GATCLATKSMTCC
Sbjct: 434 DFQASNKLQSLEVTMDTACSTSSRRKIFPAGDLGIAETKATRRTFLYGATCLATKSMTCC 255
Query: 376 SVRFDPGFLTIKAIGSCPXXXXXXXXXXXXXXXG*EFRICSSSAGGT*YPLYFINSFNRS 197
VRF+PGFLTIKAIGSCP G*EFRICSSSAGGT*YPLYFINSFNRS
Sbjct: 254 LVRFEPGFLTIKAIGSCPTSSSGYGITAASMISG*EFRICSSSAGGT*YPLYFINSFNRS 75
Query: 196 TM*SNPSSLK*XXXPVFNQ 140
TM* NPSSLK* PVFNQ
Sbjct: 74 TM*RNPSSLK*HRSPVFNQ 18
Score = 190 bits (410), Expect(2) = 2e-048
Identities = 85/113 (75%), Positives = 87/113 (76%)
Frame = +1 / +2
Query: 124 QWIQKAG*KPVXXATSTRMGYSTLLIG*KS**STRDIRYLLPNWXXXXXXXXXXWTQQLF 303
Q IQKAG*K V ATS RMG+STLLIG*KS**+TRDIRYL PNW W QQLF
Sbjct: 2 QLIQKAG*KLVTYATSMRMGFSTLLIG*KS**NTRDIRYLQPNWSIS*ILILISWMQQLF 181
Query: 304 LIQTKTPGNSQWLL**GNQGQTLPSNKSWISWLNRSHPTRKFVEWPLFLQSPN 462
QTK GN QWLL**GNQ QTLPSNKSWISWLNRSH TRK VEWPLFLQ PN
Sbjct: 182 RTQTKMSGNYQWLL**GNQAQTLPSNKSWISWLNRSHRTRKSVEWPLFLQFPN 340
Score = 164 bits (353), Expect(2) = 8e-061
Identities = 65/71 (91%), Positives = 68/71 (95%)
Frame = +2 / +3
Query: 326 ATPNGFYSEETRVKPYRATSHGFRG*TGRTLQESSSSGLCFCNPQIACWEDLAAGACRAG 505
AT NGFYSEETR+KPY+ATSHGFRG*TGRT+QES SSGLCFCN QIACWEDLAAGACRAG
Sbjct: 204 ATTNGFYSEETRLKPYQATSHGFRG*TGRTVQESPSSGLCFCNSQIACWEDLAAGACRAG 383
Query: 506 RVHGYLQALKF 538
RVHGYLQALKF
Sbjct: 384 RVHGYLQALKF 416
Score = 119 bits (254), Expect(2) = 9e-048
Identities = 57/80 (71%), Positives = 59/80 (73%)
Frame = -2 / -3
Query: 378 AR*GLTLVSSL*KPLGVAXXXXXXXXXXXRP*YQDENSGYAPVRQEVPDIPCTLSTLSTD 199
A *GL+LVSSL*KPL VA P*YQDENSGYAPVR EVPDIPC LSTLSTD
Sbjct: 256 AW*GLSLVSSL*KPLVVARHLRLGTE*LLHP*YQDENSGYAPVRLEVPDIPCILSTLSTD 77
Query: 198 QQCRVTHPR*SSXXXRFSTS 139
QQCR THP *SS +FSTS
Sbjct: 76 QQCRETHPH*SSIGHQFSTS 17
Score = 92.7 bits (196), Expect(2) = 9e-048
Identities = 37/40 (92%), Positives = 37/40 (92%)
Frame = -2 / -3
Query: 537 NFKAWRYPWTRPALQAPAARSSQQAIWGLQKQRPLDELSC 418
NFKAWR PWTRPALQAPAARSSQQAIW LQKQRPLD LSC
Sbjct: 415 NFKAWR*PWTRPALQAPAARSSQQAIWELQKQRPLDGLSC 296
Score = 90.9 bits (192), Expect(2) = 8e-061
Identities = 39/47 (82%), Positives = 41/47 (87%)
Frame = +2 / +3
Query: 131 FRRLVENRXXXLLQRGWVTLHC*SVERVDKVQGISGTSCRTGAYPEF 271
FRRLVEN LLQ GWV+LHC*SVERVDK+QGISGTS RTGAYPEF
Sbjct: 9 FRRLVENW*PMLLQ*GWVSLHC*SVERVDKIQGISGTSSRTGAYPEF 149
Score = 23.5 bits (45), Expect(2) = 2e-048
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = +1 / +2
Query: 514 WVPPSFEV 537
W+PPSFEV
Sbjct: 392 WLPPSFEV 415
>gb|CN127673.1|CN127673 RHOH1_24_H12.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_24_H12_A002 3', mRNA sequence
Length = 759
Score = 230 bits (496), Expect = 2e-059
Identities = 91/144 (63%), Positives = 118/144 (81%)
Frame = +3 / +2
Query: 81 IFSGYVGDDEATAATVDSEGWLKTGXXXYFNEDGLLYIVDRLKELIKYKGYQVPPAELEH 260
+ GY + EAT +T+ +GWLKTG Y +EDG L++VDRLKELIKYKGYQVPPAELE
Sbjct: 17 VMKGYFKNTEATQSTLTPDGWLKTGDLCYIDEDGYLFVVDRLKELIKYKGYQVPPAELEA 196
Query: 261 ILNSHPDIMDAAVIPYPDEDAGQLPMAFIVRKPGSNLTEQQVMDFVAKQVAPYKKVRRVA 440
+L +H +I D AVIP+PD + GQ PMA++VRK GSNL+E++VM+FVAKQVAPYKKVR+VA
Sbjct: 197 LLLTHSEIQDVAVIPFPDREVGQFPMAYVVRKKGSNLSEREVMEFVAKQVAPYKKVRKVA 376
Query: 441 FVSAIPKSPAGKILRRELVEQAVS 512
FV+ IPK+ +GKILR++L++ A S
Sbjct: 377 FVTEIPKNASGKILRKDLIKLATS 448
>gb|BZ350862.1|BZ350862 ht61f07.g1 WGS-SbicolorF (JM107 adapted methyl filtered) Sorghum
bicolor genomic clone ht61f07 5', DNA sequence
Length = 714
Score = 107 bits (228), Expect(3) = 6e-054
Identities = 44/48 (91%), Positives = 44/48 (91%)
Frame = +3 / +3
Query: 96 VGDDEATAATVDSEGWLKTGXXXYFNEDGLLYIVDRLKELIKYKGYQV 239
VGDDEATAATVDSEGWLKTG YFNEDG LYIVDRLKELIKYKGYQV
Sbjct: 3 VGDDEATAATVDSEGWLKTGDLCYFNEDGFLYIVDRLKELIKYKGYQV 146
Score = 92.3 bits (195), Expect(3) = 1e-049
Identities = 39/48 (81%), Positives = 43/48 (89%)
Frame = -3 / -2
Query: 242 RYLISLVLYQLFQPINNVE*PILVEVAXXTGFQPAF*IHCCCSSLVVT 99
++LISLV YQLFQPINNVE PIL+EVA T FQPAF*I+CCCSSLVVT
Sbjct: 149 QHLISLVFYQLFQPINNVEKPILIEVA*VTSFQPAF*INCCCSSLVVT 6
Score = 90.0 bits (190), Expect(3) = 3e-036
Identities = 39/50 (78%), Positives = 42/50 (84%)
Frame = +2 / +2
Query: 95 CR*RRGYCSNSGFRRLVENRXXXLLQRGWVTLHC*SVERVDKVQGISGTS 244
C *RRGYCSNS FRRLVEN LLQ GWV+LHC*SVERVDK+QGISG +
Sbjct: 2 CG*RRGYCSNS*FRRLVENW*PMLLQ*GWVSLHC*SVERVDKIQGISGAA 151
Score = 82.6 bits (174), Expect(3) = 6e-054
Identities = 34/39 (87%), Positives = 36/39 (92%)
Frame = +3 / +1
Query: 294 AVIPYPDEDAGQLPMAFIVRKPGSNLTEQQVMDFVAKQV 410
A+ YPDED GQLPMAFIVRKPGSNLT+QQVMDFVAKQV
Sbjct: 415 ALCRYPDEDVGQLPMAFIVRKPGSNLTKQQVMDFVAKQV 531
Score = 82.2 bits (173), Expect(3) = 1e-049
Identities = 30/38 (78%), Positives = 32/38 (84%)
Frame = -3 / -1
Query: 407 LFSHEIHDLLLGKV*PWFPHYKSHWELPGVFVWIRNNC 294
LFSHEIHDLLLGKV* WFPHYKSHW LP +FVW+ C
Sbjct: 528 LFSHEIHDLLLGKV*AWFPHYKSHW*LPDIFVWVPA*C 415
Score = 79.9 bits (168), Expect(3) = 3e-030
Identities = 40/48 (83%), Positives = 42/48 (87%)
Frame = +1 / +1
Query: 94 MSVTTRLLQQQWIQKAG*KPVXXATSTRMGYSTLLIG*KS**STRDIR 237
M VTTRLLQQQ IQKAG*K V ATS RMG+STLLIG*KS**+TRDIR
Sbjct: 1 MWVTTRLLQQQLIQKAG*KLVTYATSMRMGFSTLLIG*KS**NTRDIR 144
Score = 73.0 bits (153), Expect(3) = 7e-033
Identities = 29/37 (78%), Positives = 31/37 (83%)
Frame = -1 / -2
Query: 433 RRTFL*GATCLATKSMTCCSVRFDPGFLTIKAIGSCP 323
+ T * TCLATKSMTCC VRF+PGFLTIKAIGSCP
Sbjct: 554 QNTIK*QCTCLATKSMTCCLVRFEPGFLTIKAIGSCP 444
Score = 72.1 bits (151), Expect(3) = 3e-036
Identities = 29/33 (87%), Positives = 29/33 (87%)
Frame = +1 / +2
Query: 310 QTKTPGNSQWLL**GNQGQTLPSNKSWISWLNR 408
QTK GN QWLL**GNQ QTLPSNKSWISWLNR
Sbjct: 431 QTKMSGNYQWLL**GNQAQTLPSNKSWISWLNR 529
Score = 66.6 bits (139), Expect(3) = 7e-033
Identities = 29/33 (87%), Positives = 29/33 (87%)
Frame = -1 / -3
Query: 238 T*YPLYFINSFNRSTM*SNPSSLK*XXXPVFNQ 140
T*YPLYFINSFNRSTM* NPSSLK* PVFNQ
Sbjct: 145 T*YPLYFINSFNRSTM*RNPSSLK*HRSPVFNQ 47
Score = 64.3 bits (134), Expect(3) = 3e-030
Identities = 25/28 (89%), Positives = 27/28 (96%)
Frame = +2 / +3
Query: 326 ATPNGFYSEETRVKPYRATSHGFRG*TG 409
AT NGFYSEETR+KPY+ATSHGFRG*TG
Sbjct: 447 ATTNGFYSEETRLKPYQATSHGFRG*TG 530
Score = 62.0 bits (129), Expect(3) = 1e-049
Identities = 22/26 (84%), Positives = 25/26 (96%)
Frame = -3 / -1
Query: 311 WIRNNCCVHDIRMRIQDMLQFGRRYL 234
++RNNCC+HDIRMRIQDMLQFG RYL
Sbjct: 321 YLRNNCCIHDIRMRIQDMLQFGWRYL 244
Score = 61.1 bits (127), Expect(3) = 6e-054
Identities = 25/31 (80%), Positives = 27/31 (87%)
Frame = +3 / +1
Query: 213 LIKYKGYQVPPAELEHILNSHPDIMDAAVIP 305
++ Y QVPPAELEHILNSHPDIMDAAVIP
Sbjct: 223 VLTYILLQVPPAELEHILNSHPDIMDAAVIP 315
Score = 43.2 bits (88), Expect(3) = 7e-033
Identities = 17/18 (94%), Positives = 17/18 (94%)
Frame = -2 / -3
Query: 288 P*YQDENSGYAPVRQEVP 235
P*YQDENSGYAPVR EVP
Sbjct: 298 P*YQDENSGYAPVRLEVP 245
Score = 29.9 bits (59), Expect(3) = 3e-030
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = +2 / +3
Query: 236 GTSCRTGAYPEF 271
GTS RTGAYPEF
Sbjct: 246 GTSSRTGAYPEF 281
Score = 29.5 bits (58), Expect(3) = 3e-036
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +1 / +2
Query: 235 RYLLPNWXXXXXXXXXXWTQQLF 303
RYL PNW W QQLF
Sbjct: 245 RYLQPNWSIS*ILILISWMQQLF 313
>gb|CF758077.1|CF758077 DSAF1_27_A03.g1_A011 Drought-stressed after flowering Sorghum
bicolor cDNA clone DSAF1_27_A03_A011 3', mRNA sequence
Length = 532
Score = 206 bits (445), Expect = 2e-052
Identities = 75/85 (88%), Positives = 80/85 (94%)
Frame = -3 / -3
Query: 536 TSKLGGTHGHGLLYKLPPQDLPSRRFGDCRNKGHSTNFLVGCDLFSHEIHDLLLGKV*PW 357
TSKLGG HGHGLLYKLPPQDLPSRRFG+CRNKGHST+FLV CDLFSHEIHDLLLGKV* W
Sbjct: 257 TSKLGGNHGHGLLYKLPPQDLPSRRFGNCRNKGHSTDFLVRCDLFSHEIHDLLLGKV*AW 78
Query: 356 FPHYKSHWELPGVFVWIRNNCCVHD 282
FPHYKSHW LP +FVW+RNNCC+HD
Sbjct: 77 FPHYKSHW*LPDIFVWVRNNCCIHD 3
Score = 188 bits (404), Expect = 1e-046
Identities = 85/102 (83%), Positives = 89/102 (87%)
Frame = +3 / +3
Query: 282 IMDAAVIPYPDEDAGQLPMAFIVRKPGSNLTEQQVMDFVAKQVAPYKKVRRVAFVSAIPK 461
IMDAAVIPYPDED GQLPMAFIVRKPGSNLT+QQVMDFVAKQVAPYKKVRRVAFVSAIPK
Sbjct: 3 IMDAAVIPYPDEDVGQLPMAFIVRKPGSNLTKQQVMDFVAKQVAPYKKVRRVAFVSAIPK 182
Query: 462 SPAGKILRRELVEQAVSMGTSKL*SLKFILTSKSRRKFSPTP 587
SPAGKILRRELVEQAVSM TSKL*SL S+ ++ P
Sbjct: 183 SPAGKILRRELVEQAVSMVTSKL*SLLLAWKSRGFLLYNTRP 308
Score = 164 bits (353), Expect = 1e-039
Identities = 65/71 (91%), Positives = 68/71 (95%)
Frame = +2 / +2
Query: 326 ATPNGFYSEETRVKPYRATSHGFRG*TGRTLQESSSSGLCFCNPQIACWEDLAAGACRAG 505
AT NGFYSEETR+KPY+ATSHGFRG*TGRT+QES SSGLCFCN QIACWEDLAAGACRAG
Sbjct: 47 ATTNGFYSEETRLKPYQATSHGFRG*TGRTVQESPSSGLCFCNSQIACWEDLAAGACRAG 226
Query: 506 RVHGYLQALKF 538
RVHGYLQALKF
Sbjct: 227 RVHGYLQALKF 259
Score = 162 bits (349), Expect = 4e-039
Identities = 69/78 (88%), Positives = 71/78 (91%)
Frame = -1 / -1
Query: 556 DVSINFKLQSLEVPMDTACSTSSRRKIFPAGDLGIAETKATRRTFL*GATCLATKSMTCC 377
D + KLQSLEV MDTACSTSSRRKIFPAGDLGIAETKATRRTFL GATCLATKSMTCC
Sbjct: 277 DFQASNKLQSLEVTMDTACSTSSRRKIFPAGDLGIAETKATRRTFLYGATCLATKSMTCC 98
Query: 376 SVRFDPGFLTIKAIGSCP 323
VRF+PGFLTIKAIGSCP
Sbjct: 97 LVRFEPGFLTIKAIGSCP 44
Score = 121 bits (258), Expect(2) = 1e-027
Identities = 49/59 (83%), Positives = 49/59 (83%)
Frame = +1 / +1
Query: 286 WTQQLFLIQTKTPGNSQWLL**GNQGQTLPSNKSWISWLNRSHPTRKFVEWPLFLQSPN 462
W QQLF QTK GN QWLL**GNQ QTLPSNKSWISWLNRSH TRK VEWPLFLQ PN
Sbjct: 7 WMQQLFRTQTKMSGNYQWLL**GNQAQTLPSNKSWISWLNRSHRTRKSVEWPLFLQFPN 183
Score = 92.7 bits (196), Expect(2) = 9e-021
Identities = 37/40 (92%), Positives = 37/40 (92%)
Frame = -2 / -2
Query: 537 NFKAWRYPWTRPALQAPAARSSQQAIWGLQKQRPLDELSC 418
NFKAWR PWTRPALQAPAARSSQQAIW LQKQRPLD LSC
Sbjct: 258 NFKAWR*PWTRPALQAPAARSSQQAIWELQKQRPLDGLSC 139
Score = 28.6 bits (56), Expect(2) = 9e-021
Identities = 18/33 (54%), Positives = 19/33 (57%)
Frame = -2 / -2
Query: 378 AR*GLTLVSSL*KPLGVAXXXXXXXXXXXRP*Y 280
A *GL+LVSSL*KPL VA P*Y
Sbjct: 99 AW*GLSLVSSL*KPLVVARHLRLGTE*LLHP*Y 1
Score = 23.5 bits (45), Expect(2) = 1e-027
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = +1 / +1
Query: 514 WVPPSFEV 537
W+PPSFEV
Sbjct: 235 WLPPSFEV 258
>gb|BE362940.2|BE362940 DG1_91_B11.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 440
Score = 195 bits (421), Expect = 5e-049
Identities = 78/126 (61%), Positives = 101/126 (80%)
Frame = +3 / +1
Query: 135 EGWLKTGXXXYFNEDGLLYIVDRLKELIKYKGYQVPPAELEHILNSHPDIMDAAVIPYPD 314
+GWL TG YF+E G L++VDRLKELIKYKG+Q+ PAELE +L SHP+I+DAAVIPYPD
Sbjct: 34 QGWLHTGDLGYFDERGQLHVVDRLKELIKYKGFQIAPAELEGLLLSHPEILDAAVIPYPD 213
Query: 315 EDAGQLPMAFIVRKPGSNLTEQQVMDFVAKQVAPYKKVRRVAFVSAIPKSPAGKILRREL 494
+AG++P+A++VR P S+L E V F+ KQVA YK++R+V FV ++PKS AGKILRREL
Sbjct: 214 PEAGEVPIAYVVRSPKSSLAEVDVQKFIEKQVAHYKRLRKVKFVDSVPKSAAGKILRREL 393
Query: 495 VEQAVS 512
+ Q S
Sbjct: 394 IAQVRS 411
>gb|CX613435.1|CX613435 GABR1_8_D10.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_8_D10_A002 3', mRNA sequence
Length = 693
Score = 193 bits (415), Expect = 3e-048
Identities = 76/138 (55%), Positives = 105/138 (76%)
Frame = +3 / +3
Query: 81 IFSGYVGDDEATAATVDSEGWLKTGXXXYFNEDGLLYIVDRLKELIKYKGYQVPPAELEH 260
I GY+ D E+T T+D +GWL TG Y ++D ++IVDRLKE+IKYKG+QVPPAELE
Sbjct: 42 IMKGYLNDLESTKNTIDKDGWLHTGDIGYVDDDDEIFIVDRLKEIIKYKGFQVPPAELEA 221
Query: 261 ILNSHPDIMDAAVIPYPDEDAGQLPMAFIVRKPGSNLTEQQVMDFVAKQVAPYKKVRRVA 440
+L +HP+I DAAV+ D+ AG++P+AFIVR GS +TE ++ FVAK+V YKK+ +V
Sbjct: 222 LLITHPEIKDAAVVSMKDDLAGEIPVAFIVRTEGSEVTEDEIKQFVAKEVVFYKKIHKVF 401
Query: 441 FVSAIPKSPAGKILRREL 494
F +IPK+P+GKILR++L
Sbjct: 402 FTESIPKNPSGKILRKDL 455
>gb|CN129079.1|CN129079 RHOH1_33_H09.b3_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_33_H09_A002 3', mRNA sequence
Length = 733
Score = 191 bits (412), Expect = 9e-048
Identities = 75/138 (54%), Positives = 103/138 (74%)
Frame = +3 / +2
Query: 81 IFSGYVGDDEATAATVDSEGWLKTGXXXYFNEDGLLYIVDRLKELIKYKGYQVPPAELEH 260
+ GY+ + EATA T+D EGWL TG Y ++D ++IVDRLKELIKYKG+QV PAELE
Sbjct: 197 LMKGYLNNPEATAKTIDDEGWLDTGDIGYVDDDDEIFIVDRLKELIKYKGFQVAPAELEA 376
Query: 261 ILNSHPDIMDAAVIPYPDEDAGQLPMAFIVRKPGSNLTEQQVMDFVAKQVAPYKKVRRVA 440
+L +HP I DAAV+P D+ G++P+AF+V G +TE ++ +VAKQV YK++ +V
Sbjct: 377 MLIAHPSIADAAVVPMKDDSCGEIPVAFVVTSGGYEMTEDEIKQYVAKQVVFYKRLHKVF 556
Query: 441 FVSAIPKSPAGKILRREL 494
FV AIPK+P+GKILR++L
Sbjct: 557 FVEAIPKAPSGKILRKDL 610
>gb|CX606247.1|CX606247 ANR1_2_A04.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_2_A04_A002 3', mRNA sequence
Length = 632
Score = 141 bits (303), Expect(2) = 9e-045
Identities = 56/95 (58%), Positives = 72/95 (75%)
Frame = +3 / +3
Query: 81 IFSGYVGDDEATAATVDSEGWLKTGXXXYFNEDGLLYIVDRLKELIKYKGYQVPPAELEH 260
+ +GY + EAT T+D++GWL+TG Y++ +G YIVDRLKELIK KG+QV PAELE
Sbjct: 120 VMAGYHNNPEATRETIDADGWLRTGDIAYYDREGYFYIVDRLKELIKTKGFQVAPAELEA 299
Query: 261 ILNSHPDIMDAAVIPYPDEDAGQLPMAFIVRKPGS 365
IL +HP I DAAVIP PDE AG++P AF+V KP +
Sbjct: 300 ILLTHPKIADAAVIPSPDERAGEVPKAFVVAKPNA 404
Score = 60.2 bits (125), Expect(2) = 9e-045
Identities = 26/45 (57%), Positives = 35/45 (77%)
Frame = +3 / +3
Query: 369 LTEQQVMDFVAKQVAPYKKVRRVAFVSAIPKSPAGKILRRELVEQ 503
L E +VMDFVA +VA +K++ V FV AIPK+ +GKILRR+L E+
Sbjct: 411 LAEAEVMDFVAGKVAHFKRLHFVEFVEAIPKTSSGKILRRDLKER 545
>gb|BI211898.1|BI211898 IP1_62_G05.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 679
Score = 181 bits (389), Expect = 1e-044
Identities = 75/138 (54%), Positives = 102/138 (73%)
Frame = +3 / +1
Query: 81 IFSGYVGDDEATAATVDSEGWLKTGXXXYFNEDGLLYIVDRLKELIKYKGYQVPPAELEH 260
+ GY E T +T+D+ GWL TG Y ++DG ++IVDR+KELIKYKG+QV PAELE
Sbjct: 10 VMQGYYRRKEETESTIDAAGWLHTGDVGYIDDDGDVFIVDRIKELIKYKGFQVAPAELEA 189
Query: 261 ILNSHPDIMDAAVIPYPDEDAGQLPMAFIVRKPGSNLTEQQVMDFVAKQVAPYKKVRRVA 440
IL SHP + DAAV PDE+AG++P + +VR+ G+ +E +M +VA++VA YKK+R +
Sbjct: 190 ILLSHPSVEDAAVFGLPDEEAGEVPASCVVRRRGAPESEADMMAYVAERVASYKKLRLLR 369
Query: 441 FVSAIPKSPAGKILRREL 494
FV AIPKS +GKILRR+L
Sbjct: 370 FVDAIPKSVSGKILRRQL 423
>gb|CW146571.1|CW146571 104_539_11139064_116_34991_056 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11139064, DNA
sequence
Length = 696
Score = 91.3 bits (193), Expect(3) = 4e-044
Identities = 34/51 (66%), Positives = 43/51 (84%)
Frame = +3 / -1
Query: 87 SGYVGDDEATAATVDSEGWLKTGXXXYFNEDGLLYIVDRLKELIKYKGYQV 239
+GYV D+EA A++ DSEGWL+TG Y ++DG L++VDRLKELIKYKGYQV
Sbjct: 585 AGYVADEEANASSFDSEGWLRTGDLCYIDQDGFLFVVDRLKELIKYKGYQV 433
Score = 83.1 bits (175), Expect(3) = 4e-044
Identities = 32/52 (61%), Positives = 43/52 (82%)
Frame = +3 / -2
Query: 297 VIPYPDEDAGQLPMAFIVRKPGSNLTEQQVMDFVAKQVAPYKKVRRVAFVSA 452
V YP E+AGQ+P+A +VR+PGS +TE QV+D VAK+VAPYKK+R+V FV +
Sbjct: 158 VYRYPHEEAGQIPVALVVRQPGSKVTEAQVIDHVAKRVAPYKKIRKVLFVDS 3
Score = 43.7 bits (89), Expect(3) = 4e-044
Identities = 17/28 (60%), Positives = 22/28 (78%)
Frame = +3 / -2
Query: 222 YKGYQVPPAELEHILNSHPDIMDAAVIP 305
Y QVPPAELE +L S P+++DAAV+P
Sbjct: 335 YLSLQVPPAELELVLQSLPEVIDAAVMP 252
>gb|CW128046.1|CW128046 104_509_11113781_116_34744_023 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11113781, DNA
sequence
Length = 650
Score = 106 bits (227), Expect(2) = 1e-040
Identities = 43/66 (65%), Positives = 52/66 (78%)
Frame = +3 / -1
Query: 108 EATAATVDSEGWLKTGXXXYFNEDGLLYIVDRLKELIKYKGYQVPPAELEHILNSHPDIM 287
EATA T+D EGWL TG Y ++D ++IVDRLKELIKYKG+QV PAELE +L +HP I
Sbjct: 632 EATAKTIDDEGWLHTGDMGYVDDDDEIFIVDRLKELIKYKGFQVAPAELEAMLIAHPSIA 453
Query: 288 DAAVIP 305
DAAV+P
Sbjct: 452 DAAVVP 435
Score = 81.3 bits (171), Expect(2) = 1e-040
Identities = 30/61 (49%), Positives = 46/61 (75%)
Frame = +3 / -3
Query: 312 DEDAGQLPMAFIVRKPGSNLTEQQVMDFVAKQVAPYKKVRRVAFVSAIPKSPAGKILRRE 491
D+ G++P+AF+V G +TE ++ +VAKQV YK++ +V FV AIPK+P+GKILR++
Sbjct: 318 DDSCGEIPVAFVVTSGGYEMTEDEIKQYVAKQVVFYKRLHKVFFVEAIPKAPSGKILRKD 139
Query: 492 L 494
L
Sbjct: 138 L 136
>gb|CW078695.1|CW078695 104_396_10898313_114_31923_153 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10898313, DNA
sequence
Length = 767
Score = 104 bits (222), Expect(2) = 7e-040
Identities = 42/73 (57%), Positives = 53/73 (72%)
Frame = +3 / +3
Query: 81 IFSGYVGDDEATAATVDSEGWLKTGXXXYFNEDGLLYIVDRLKELIKYKGYQVPPAELEH 260
+ GY E T +T+D+ GWL TG Y ++DG ++IVDR+KELIKYKG+QV PAELE
Sbjct: 240 VMQGYYRRKEETESTIDAAGWLHTGDVGYIDDDGDVFIVDRIKELIKYKGFQVAPAELEA 419
Query: 261 ILNSHPDIMDAAV 299
IL SHP + DAAV
Sbjct: 420 ILLSHPSVEDAAV 458
Score = 80.8 bits (170), Expect(2) = 7e-040
Identities = 33/62 (53%), Positives = 49/62 (79%)
Frame = +3 / +2
Query: 309 PDEDAGQLPMAFIVRKPGSNLTEQQVMDFVAKQVAPYKKVRRVAFVSAIPKSPAGKILRR 488
PDE+AG++P + +VR+ G+ +E +M +VA++VA YKK+R + FV AIPKS +GKILRR
Sbjct: 545 PDEEAGEVPASCVVRRRGAPESEADMMAYVAERVASYKKLRLLRFVDAIPKSVSGKILRR 724
Query: 489 EL 494
+L
Sbjct: 725 QL 730
>gb|BZ629316.1|BZ629316 ih65e07.b1 WGS-SbicolorF (DH5a methyl filtered) Sorghum bicolor
genomic clone ih65e07 5', DNA sequence
Length = 668
Score = 104 bits (222), Expect(2) = 7e-040
Identities = 42/73 (57%), Positives = 53/73 (72%)
Frame = +3 / +2
Query: 81 IFSGYVGDDEATAATVDSEGWLKTGXXXYFNEDGLLYIVDRLKELIKYKGYQVPPAELEH 260
+ GY E T +T+D+ GWL TG Y ++DG ++IVDR+KELIKYKG+QV PAELE
Sbjct: 83 VMQGYYRRKEETESTIDAAGWLHTGDVGYIDDDGDVFIVDRIKELIKYKGFQVAPAELEA 262
Query: 261 ILNSHPDIMDAAV 299
IL SHP + DAAV
Sbjct: 263 ILLSHPSVEDAAV 301
Score = 80.8 bits (170), Expect(2) = 7e-040
Identities = 33/62 (53%), Positives = 49/62 (79%)
Frame = +3 / +1
Query: 309 PDEDAGQLPMAFIVRKPGSNLTEQQVMDFVAKQVAPYKKVRRVAFVSAIPKSPAGKILRR 488
PDE+AG++P + +VR+ G+ +E +M +VA++VA YKK+R + FV AIPKS +GKILRR
Sbjct: 388 PDEEAGEVPASCVVRRRGAPESEADMMAYVAERVASYKKLRLLRFVDAIPKSVSGKILRR 567
Query: 489 EL 494
+L
Sbjct: 568 QL 573
>gb|CN129749.1|CN129749 RHOH1_37_E03.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_37_E03_A002 3', mRNA sequence
Length = 850
Score = 100 bits (212), Expect(2) = 2e-039
Identities = 38/74 (51%), Positives = 55/74 (74%)
Frame = +3 / +2
Query: 81 IFSGYVGDDEATAATVDSEGWLKTGXXXYFNEDGLLYIVDRLKELIKYKGYQVPPAELEH 260
I GY+ + +AT ++D++GWL TG + ++D ++IVDRLKE+IKYKG QV PAE+E
Sbjct: 407 IMKGYLNNPDATKNSIDADGWLHTGDVGFVDDDDEIFIVDRLKEIIKYKGLQVAPAEIEA 586
Query: 261 ILNSHPDIMDAAVI 302
+L +HP I DAAV+
Sbjct: 587 LLITHPSIADAAVV 628
Score = 84.0 bits (177), Expect(2) = 2e-039
Identities = 33/64 (51%), Positives = 47/64 (73%)
Frame = +3 / +2
Query: 312 DEDAGQLPMAFIVRKPGSNLTEQQVMDFVAKQVAPYKKVRRVAFVSAIPKSPAGKILRRE 491
+ + G++P+AF+ + GS L+E V FVAK+V YKKVR V F+ IPK+P+GKILR+E
Sbjct: 641 EPEIGEIPVAFVAKAKGSELSEDDVKQFVAKEVIYYKKVREVIFIDKIPKAPSGKILRKE 820
Query: 492 LVEQ 503
L +Q
Sbjct: 821 LRKQ 832
>gb|CD429206.1|CD429206 ETH1_3_C09.b1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_3_C09_A002 3', mRNA sequence
Length = 652
Score = 100 bits (212), Expect(2) = 2e-039
Identities = 38/74 (51%), Positives = 55/74 (74%)
Frame = +3 / +2
Query: 81 IFSGYVGDDEATAATVDSEGWLKTGXXXYFNEDGLLYIVDRLKELIKYKGYQVPPAELEH 260
I GY+ + +AT ++D++GWL TG + ++D ++IVDRLKE+IKYKG QV PAE+E
Sbjct: 14 IMKGYLNNPDATKNSIDADGWLHTGDVGFVDDDDEIFIVDRLKEIIKYKGLQVAPAEIEA 193
Query: 261 ILNSHPDIMDAAVI 302
+L +HP I DAAV+
Sbjct: 194 LLITHPSIADAAVV 235
Score = 84.0 bits (177), Expect(2) = 2e-039
Identities = 33/64 (51%), Positives = 47/64 (73%)
Frame = +3 / +2
Query: 312 DEDAGQLPMAFIVRKPGSNLTEQQVMDFVAKQVAPYKKVRRVAFVSAIPKSPAGKILRRE 491
+ + G++P+AF+ + GS L+E V FVAK+V YKKVR V F+ IPK+P+GKILR+E
Sbjct: 248 EPEIGEIPVAFVAKAKGSELSEDDVKQFVAKEVIYYKKVREVIFIDKIPKAPSGKILRKE 427
Query: 492 LVEQ 503
L +Q
Sbjct: 428 LRKQ 439
>gb|CD229384.1|CD229384 CCC1_15_E01.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_15_E01_A007 3', mRNA sequence
Length = 613
Score = 100 bits (212), Expect(2) = 2e-039
Identities = 38/74 (51%), Positives = 55/74 (74%)
Frame = +3 / +1
Query: 81 IFSGYVGDDEATAATVDSEGWLKTGXXXYFNEDGLLYIVDRLKELIKYKGYQVPPAELEH 260
I GY+ + +AT ++D++GWL TG + ++D ++IVDRLKE+IKYKG QV PAE+E
Sbjct: 175 IMKGYLNNPDATKNSIDADGWLHTGDVGFVDDDDEIFIVDRLKEIIKYKGLQVAPAEIEA 354
Query: 261 ILNSHPDIMDAAVI 302
+L +HP I DAAV+
Sbjct: 355 LLITHPSIADAAVV 396
Score = 84.0 bits (177), Expect(2) = 2e-039
Identities = 33/64 (51%), Positives = 47/64 (73%)
Frame = +3 / +1
Query: 312 DEDAGQLPMAFIVRKPGSNLTEQQVMDFVAKQVAPYKKVRRVAFVSAIPKSPAGKILRRE 491
+ + G++P+AF+ + GS L+E V FVAK+V YKKVR V F+ IPK+P+GKILR+E
Sbjct: 409 EPEIGEIPVAFVAKAKGSELSEDDVKQFVAKEVIYYKKVREVIFIDKIPKAPSGKILRKE 588
Query: 492 LVEQ 503
L +Q
Sbjct: 589 LRKQ 600
>gb|BE359084.1|BE359084 DG1_38_H02.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 384
Score = 162 bits (348), Expect = 6e-039
Identities = 66/117 (56%), Positives = 90/117 (76%)
Frame = +3 / +3
Query: 144 LKTGXXXYFNEDGLLYIVDRLKELIKYKGYQVPPAELEHILNSHPDIMDAAVIPYPDEDA 323
L TG Y ++D ++IVDRLKE+IKYKG QVPPAELE +L +HP+I DAAV+ D+ A
Sbjct: 3 LHTGDIGYVDDDDEIFIVDRLKEIIKYKGLQVPPAELEALLITHPEIKDAAVVSMKDDLA 182
Query: 324 GQLPMAFIVRKPGSNLTEQQVMDFVAKQVAPYKKVRRVAFVSAIPKSPAGKILRREL 494
G++P+AFIVR GS +TE ++ FVAK+V YKK+ +V F +IPK+P+GKILR++L
Sbjct: 183 GEIPVAFIVRTEGSEVTEDEIKQFVAKEVVFYKKIHKVFFSESIPKNPSGKILRKDL 353
>gb|CN145355.1|CN145355 WOUND1_28_A03.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_28_A03_A002 5', mRNA sequence
Length = 682
Score = 159 bits (342), Expect = 4e-038
Identities = 61/116 (52%), Positives = 87/116 (75%)
Frame = +3 / +3
Query: 81 IFSGYVGDDEATAATVDSEGWLKTGXXXYFNEDGLLYIVDRLKELIKYKGYQVPPAELEH 260
I GY+ D EAT T+D +GWL TG Y ++D ++IVDRLKE+IKYKG+QVPPAE+E
Sbjct: 333 IMKGYLNDPEATKNTIDKDGWLHTGDIGYVDDDDEIFIVDRLKEIIKYKGFQVPPAEVEA 512
Query: 261 ILNSHPDIMDAAVIPYPDEDAGQLPMAFIVRKPGSNLTEQQVMDFVAKQVAPYKKV 428
+L +HP+I DAAV+ DE AG++P+AFI++ GS ++E ++ FVAK+V YK++
Sbjct: 513 LLITHPEIRDAAVVSMKDELAGEVPVAFIIQSEGSEISENEIKQFVAKEVVFYKRI 680
>gb|CW194292.1|CW194292 104_617_11180020_148_36790_008 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11180020, DNA
sequence
Length = 721
Score = 106 bits (227), Expect(3) = 5e-038
Identities = 41/70 (58%), Positives = 55/70 (78%)
Frame = +3 / +2
Query: 93 YVGDDEATAATVDSEGWLKTGXXXYFNEDGLLYIVDRLKELIKYKGYQVPPAELEHILNS 272
Y+ D E+T T+D +GWL TG Y ++D ++IVDRLKE+IKYKG+QVPPAELE +L +
Sbjct: 2 YLNDLESTKNTIDKDGWLHTGDIGYVDDDDEIFIVDRLKEIIKYKGFQVPPAELEALLIT 181
Query: 273 HPDIMDAAVI 302
HP+I DAAV+
Sbjct: 182 HPEIKDAAVV 211
Score = 47.3 bits (97), Expect(3) = 5e-038
Identities = 18/33 (54%), Positives = 26/33 (78%)
Frame = +3 / +2
Query: 312 DEDAGQLPMAFIVRKPGSNLTEQQVMDFVAKQV 410
D+ AG++P+AFIVR GS +TE ++ FVAK+V
Sbjct: 317 DDLAGEIPVAFIVRTEGSEVTEDEIKQFVAKEV 415
Score = 46.0 bits (94), Expect(3) = 5e-038
Identities = 18/33 (54%), Positives = 25/33 (75%)
Frame = +3 / +2
Query: 396 VAKQVAPYKKVRRVAFVSAIPKSPAGKILRREL 494
V QV YKK+ +V F +IPK+P+GKILR++L
Sbjct: 575 VMLQVVFYKKIHKVFFTESIPKNPSGKILRKDL 673
>gb|CF429879.1|CF429879 PH1_25_E11.b1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_25_E11_A002 3', mRNA sequence
Length = 591
Score = 149 bits (319), Expect = 6e-035
Identities = 59/99 (59%), Positives = 80/99 (80%)
Frame = +3 / +2
Query: 198 DRLKELIKYKGYQVPPAELEHILNSHPDIMDAAVIPYPDEDAGQLPMAFIVRKPGSNLTE 377
DRLKE+IKYKG+QVPPAELE +L +HP+I DAAV+ D+ AG++P+AFIVR GS +TE
Sbjct: 2 DRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVVSMKDDLAGEIPVAFIVRTEGSEVTE 181
Query: 378 QQVMDFVAKQVAPYKKVRRVAFVSAIPKSPAGKILRREL 494
++ FVAK+V YKK+ +V F +IPK+P+GKILR++L
Sbjct: 182 DEIKQFVAKEVVFYKKIHKVFFTESIPKNPSGKILRKDL 298
>gb|CD232716.1|CD232716 SS1_1_H12.b1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_1_H12_A012 3', mRNA sequence
Length = 559
Score = 148 bits (317), Expect = 1e-034
Identities = 59/99 (59%), Positives = 80/99 (80%)
Frame = +3 / +2
Query: 198 DRLKELIKYKGYQVPPAELEHILNSHPDIMDAAVIPYPDEDAGQLPMAFIVRKPGSNLTE 377
DRLKE+IKYKG+QVPPAELE +L +HP+I DAAV+ D+ AG++P+AFIVR GS +TE
Sbjct: 2 DRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVVSMKDDLAGEIPVAFIVRTEGSEVTE 181
Query: 378 QQVMDFVAKQVAPYKKVRRVAFVSAIPKSPAGKILRREL 494
++ FVAK+V YKK+ +V F +IPK+P+GKILR++L
Sbjct: 182 GEIKQFVAKEVVFYKKIHKVFFTESIPKNPSGKILRKDL 298
>gb|BE597274.1|BE597274 PI1_70_C05.g1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 644
Score = 98.7 bits (209), Expect(2) = 8e-034
Identities = 37/74 (50%), Positives = 55/74 (74%)
Frame = +3 / +3
Query: 81 IFSGYVGDDEATAATVDSEGWLKTGXXXYFNEDGLLYIVDRLKELIKYKGYQVPPAELEH 260
I GY+ + +AT ++D++GWL TG + ++D ++IVDRLKE+IKYKG QV PAE+E
Sbjct: 213 IMKGYLNNPDATKNSIDADGWLHTGDVGFVDDDDEIFIVDRLKEIIKYKGLQVAPAEIEA 392
Query: 261 ILNSHPDIMDAAVI 302
+L +HP I DA+V+
Sbjct: 393 LLITHPSIADASVV 434
Score = 66.6 bits (139), Expect(2) = 8e-034
Identities = 25/55 (45%), Positives = 37/55 (67%)
Frame = +3 / +3
Query: 312 DEDAGQLPMAFIVRKPGSNLTEQQVMDFVAKQVAPYKKVRRVAFVSAIPKSPAGK 476
+ + G++P+AF+ + GS L+E V FVAK+V YKKVR V F+ IPK+P +
Sbjct: 447 EPEIGEIPVAFVAKAKGSELSEDDVKQFVAKEVIYYKKVREVIFIDKIPKAPRAR 611
>gb|CW073480.1|CW073480 104_335_10779929_114_31363_329 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10779929, DNA
sequence
Length = 743
Score = 94.1 bits (199), Expect(3) = 2e-033
Identities = 36/67 (53%), Positives = 51/67 (76%)
Frame = +3 / +3
Query: 108 EATAATVDSEGWLKTGXXXYFNEDGLLYIVDRLKELIKYKGYQVPPAELEHILNSHPDIM 287
+AT ++D++GWL TG + ++D ++IVDRLKE+IKYKG QV PAE+E +L +HP I
Sbjct: 12 DATKNSIDADGWLHTGDVGFVDDDDEIFIVDRLKEIIKYKGLQVAPAEIEALLITHPSIA 191
Query: 288 DAAVIPY 308
DAAV+ Y
Sbjct: 192 DAAVVGY 212
Score = 51.0 bits (105), Expect(3) = 2e-033
Identities = 21/33 (63%), Positives = 26/33 (78%)
Frame = +3 / +3
Query: 405 QVAPYKKVRRVAFVSAIPKSPAGKILRRELVEQ 503
QV YKKVR V F+ IPK+P+GKILR+EL +Q
Sbjct: 570 QVIYYKKVREVIFIDKIPKAPSGKILRKELRKQ 668
Score = 40.0 bits (81), Expect(3) = 2e-033
Identities = 14/33 (42%), Positives = 23/33 (69%)
Frame = +3 / +3
Query: 312 DEDAGQLPMAFIVRKPGSNLTEQQVMDFVAKQV 410
+ + G++P+AF+ + GS L+E V FVAK+V
Sbjct: 336 EPEIGEIPVAFVAKAKGSELSEDDVKQFVAKEV 434
>gb|CL190993.1|CL190993 104_409_10906471_114_32488_022 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10906471, DNA
sequence
Length = 759
Score = 112 bits (240), Expect(2) = 5e-033
Identities = 43/72 (59%), Positives = 57/72 (79%)
Frame = +3 / -3
Query: 87 SGYVGDDEATAATVDSEGWLKTGXXXYFNEDGLLYIVDRLKELIKYKGYQVPPAELEHIL 266
+GY+ D EAT T+D +GWL TG Y ++D ++IVDRLKE+IKYKG+QVPPAELE +L
Sbjct: 571 AGYLNDPEATKNTIDKDGWLHTGDIGYVDDDDEIFIVDRLKEIIKYKGFQVPPAELEALL 392
Query: 267 NSHPDIMDAAVI 302
+HP+I DAAV+
Sbjct: 391 ITHPEIKDAAVV 356
Score = 49.6 bits (102), Expect(2) = 5e-033
Identities = 18/35 (51%), Positives = 27/35 (77%)
Frame = +3 / -2
Query: 312 DEDAGQLPMAFIVRKPGSNLTEQQVMDFVAKQVAP 416
DE AG++P+AFI+R GS ++E ++ FVAK+V P
Sbjct: 242 DELAGEVPVAFIIRSEGSEISENEIKQFVAKEVIP 138
>gb|CW331181.1|CW331181 104_828_11480770_148_36025_041 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11480770, DNA
sequence
Length = 694
Score = 112 bits (240), Expect(2) = 5e-033
Identities = 43/72 (59%), Positives = 57/72 (79%)
Frame = +3 / +3
Query: 87 SGYVGDDEATAATVDSEGWLKTGXXXYFNEDGLLYIVDRLKELIKYKGYQVPPAELEHIL 266
+GY+ D EAT T+D +GWL TG Y ++D ++IVDRLKE+IKYKG+QVPPAELE +L
Sbjct: 108 AGYLNDPEATKNTIDKDGWLHTGDIGYVDDDDEIFIVDRLKEIIKYKGFQVPPAELEALL 287
Query: 267 NSHPDIMDAAVI 302
+HP+I DAAV+
Sbjct: 288 ITHPEIKDAAVV 323
Score = 49.6 bits (102), Expect(2) = 5e-033
Identities = 18/35 (51%), Positives = 27/35 (77%)
Frame = +3 / +2
Query: 312 DEDAGQLPMAFIVRKPGSNLTEQQVMDFVAKQVAP 416
DE AG++P+AFI+R GS ++E ++ FVAK+V P
Sbjct: 437 DELAGEVPVAFIIRSEGSEISENEIKQFVAKEVIP 541
>gb|CW134050.1|CW134050 104_518_11117099_148_34816_046 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11117099, DNA
sequence
Length = 664
Score = 111 bits (237), Expect(2) = 6e-032
Identities = 43/72 (59%), Positives = 57/72 (79%)
Frame = +3 / -1
Query: 87 SGYVGDDEATAATVDSEGWLKTGXXXYFNEDGLLYIVDRLKELIKYKGYQVPPAELEHIL 266
SGY+ D E+T T+D +GWL TG Y ++D ++IVDRLKE+IKYKG+QVPPAELE +L
Sbjct: 547 SGYLNDLESTKNTIDKDGWLHTGDIGYVDDDDEIFIVDRLKEIIKYKGFQVPPAELEALL 368
Query: 267 NSHPDIMDAAVI 302
+HP+I DAAV+
Sbjct: 367 ITHPEIKDAAVV 332
Score = 47.3 bits (97), Expect(2) = 6e-032
Identities = 18/33 (54%), Positives = 26/33 (78%)
Frame = +3 / -1
Query: 312 DEDAGQLPMAFIVRKPGSNLTEQQVMDFVAKQV 410
D+ AG++P+AFIVR GS +TE ++ FVAK+V
Sbjct: 226 DDLAGEIPVAFIVRTEGSEVTEDEIKQFVAKEV 128
>gb|CD235658.1|CD235658 SS1_37_F06.b1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_37_F06_A012 3', mRNA sequence
Length = 515
Score = 136 bits (292), Expect = 3e-031
Identities = 55/96 (57%), Positives = 75/96 (78%)
Frame = +3 / +3
Query: 207 KELIKYKGYQVPPAELEHILNSHPDIMDAAVIPYPDEDAGQLPMAFIVRKPGSNLTEQQV 386
KELIK+KG+QVPPAELE +L +HP I DAAV+P D+ AG++P+AF+VR S++ E +
Sbjct: 3 KELIKFKGFQVPPAELEALLIAHPSIADAAVVPQKDDAAGEVPVAFVVRAADSDIAEDAI 182
Query: 387 MDFVAKQVAPYKKVRRVAFVSAIPKSPAGKILRREL 494
+FV+KQV YK++ +V F +IPKS +GKILRREL
Sbjct: 183 KEFVSKQVVFYKRLHKVYFTPSIPKSASGKILRREL 290
>gb|CF757766.1|CF757766 DSAF1_22_A08.g1_A011 Drought-stressed after flowering Sorghum
bicolor cDNA clone DSAF1_22_A08_A011 3', mRNA sequence
Length = 461
Score = 136 bits (292), Expect = 3e-031
Identities = 53/61 (86%), Positives = 56/61 (91%)
Frame = -3 / -1
Query: 536 TSKLGGTHGHGLLYKLPPQDLPSRRFGDCRNKGHSTNFLVGCDLFSHEIHDLLLGKV*PW 357
TSKLGG HGHGLLYKLPPQDLPSRRFG+CRNKGHST+FLV CDLFSHEIHDLLLG+ P
Sbjct: 185 TSKLGGNHGHGLLYKLPPQDLPSRRFGNCRNKGHSTDFLVRCDLFSHEIHDLLLGRFEPG 6
Query: 356 F 354
F
Sbjct: 5 F 3
Score = 133 bits (284), Expect = 4e-030
Identities = 52/60 (86%), Positives = 56/60 (93%)
Frame = +2 / +2
Query: 359 RVKPYRATSHGFRG*TGRTLQESSSSGLCFCNPQIACWEDLAAGACRAGRVHGYLQALKF 538
+ + Y+ATSHGFRG*TGRT+QES SSGLCFCN QIACWEDLAAGACRAGRVHGYLQALKF
Sbjct: 8 QAQTYQATSHGFRG*TGRTVQESPSSGLCFCNSQIACWEDLAAGACRAGRVHGYLQALKF 187
Score = 124 bits (265), Expect = 2e-027
Identities = 54/62 (87%), Positives = 55/62 (88%)
Frame = -1 / -2
Query: 556 DVSINFKLQSLEVPMDTACSTSSRRKIFPAGDLGIAETKATRRTFL*GATCLATKSMTCC 377
D + KLQSLEV MDTACSTSSRRKIFPAGDLGIAETKATRRTFL GATCLATKSMTCC
Sbjct: 205 DFQASNKLQSLEVTMDTACSTSSRRKIFPAGDLGIAETKATRRTFLYGATCLATKSMTCC 26
Query: 376 SV 371
V
Sbjct: 25 LV 20
Score = 118 bits (253), Expect = 7e-026
Identities = 56/72 (77%), Positives = 60/72 (83%)
Frame = +3 / +3
Query: 372 TEQQVMDFVAKQVAPYKKVRRVAFVSAIPKSPAGKILRRELVEQAVSMGTSKL*SLKFIL 551
T+QQVMDFVAKQVAPYKKVRRVAFVSAIPKSPAGKILRRELVEQAVSM TSKL*SL
Sbjct: 21 TKQQVMDFVAKQVAPYKKVRRVAFVSAIPKSPAGKILRRELVEQAVSMVTSKL*SLLLAW 200
Query: 552 TSKSRRKFSPTP 587
S+ ++ P
Sbjct: 201 KSRGFLLYNTRP 236
>gb|CW493569.1|CW493569 fsbb001f284g08f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f284g08, DNA
sequence
Length = 724
Score = 79.9 bits (168), Expect(3) = 7e-030
Identities = 31/50 (62%), Positives = 41/50 (82%)
Frame = +3 / -2
Query: 153 GXXXYFNEDGLLYIVDRLKELIKYKGYQVPPAELEHILNSHPDIMDAAVI 302
G Y ++D ++IVDRLKE+IKYKG+QVPPAELE +L +HP+I DAAV+
Sbjct: 723 GDIGYVDDDDEIFIVDRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVV 574
Score = 49.6 bits (102), Expect(3) = 7e-030
Identities = 18/35 (51%), Positives = 27/35 (77%)
Frame = +3 / -1
Query: 312 DEDAGQLPMAFIVRKPGSNLTEQQVMDFVAKQVAP 416
DE AG++P+AFI+R GS ++E ++ FVAK+V P
Sbjct: 460 DELAGEVPVAFIIRSEGSEISENEIKQFVAKEVIP 356
Score = 43.2 bits (88), Expect(3) = 7e-030
Identities = 15/26 (57%), Positives = 22/26 (84%)
Frame = +3 / -2
Query: 417 YKKVRRVAFVSAIPKSPAGKILRREL 494
YK++ RV F +IPK+P+GKILR++L
Sbjct: 126 YKRINRVFFTDSIPKNPSGKILRKDL 49
>gb|CN139882.1|CN139882 OX1_24_E09.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_24_E09_A002 5', mRNA sequence
Length = 781
Score = 98.2 bits (208), Expect(2) = 2e-028
Identities = 39/69 (56%), Positives = 54/69 (78%)
Frame = +3 / +3
Query: 306 YPDEDAGQLPMAFIVRKPGSNLTEQQVMDFVAKQVAPYKKVRRVAFVSAIPKSPAGKILR 485
+PD +AG++P+A++VR P S+LTE V F+ KQVA YKK+RRV FV ++PKS +GKILR
Sbjct: 120 FPDAEAGEVPIAYVVRSPVSSLTEVDVQKFIEKQVAYYKKLRRVTFVDSVPKSASGKILR 299
Query: 486 RELVEQAVS 512
REL+ + S
Sbjct: 300 RELIAKVRS 326
Score = 48.7 bits (100), Expect(2) = 2e-028
Identities = 18/28 (64%), Positives = 23/28 (82%)
Frame = +3 / +1
Query: 225 KGYQVPPAELEHILNSHPDIMDAAVIPY 308
KG+Q+ P ELE +L SHP+I+DA VIPY
Sbjct: 22 KGFQIAPFELEGLLLSHPEILDAVVIPY 105
>gb|CW327532.1|CW327532 104_823_11478800_116_35982_028 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11478800, DNA
sequence
Length = 686
Score = 63.4 bits (132), Expect(3) = 3e-027
Identities = 23/35 (65%), Positives = 31/35 (88%)
Frame = +3 / +2
Query: 306 YPDEDAGQLPMAFIVRKPGSNLTEQQVMDFVAKQV 410
+PD + GQ PMA++VRK GSNL+E++VM+FVAKQV
Sbjct: 188 FPDREVGQFPMAYVVRKKGSNLSEREVMEFVAKQV 292
Score = 60.2 bits (125), Expect(3) = 3e-027
Identities = 24/36 (66%), Positives = 32/36 (88%)
Frame = +3 / +3
Query: 405 QVAPYKKVRRVAFVSAIPKSPAGKILRRELVEQAVS 512
QVAPYKKVR+VAFV+ IPK+ +GKILR++L++ A S
Sbjct: 444 QVAPYKKVRKVAFVTEIPKNASGKILRKDLIKLATS 551
Score = 40.0 bits (81), Expect(3) = 3e-027
Identities = 16/24 (66%), Positives = 19/24 (79%)
Frame = +3 / +1
Query: 234 QVPPAELEHILNSHPDIMDAAVIP 305
QVPPAELE +L +H +I D AVIP
Sbjct: 31 QVPPAELEALLLTHSEIQDVAVIP 102
>gb|CN152126.1|CN152126 WOUND1_80_A04.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_80_A04_A002 3', mRNA sequence
Length = 681
Score = 123 bits (263), Expect = 3e-027
Identities = 49/84 (58%), Positives = 67/84 (79%)
Frame = +3 / +2
Query: 261 ILNSHPDIMDAAVIPYPDEDAGQLPMAFIVRKPGSNLTEQQVMDFVAKQVAPYKKVRRVA 440
+L SHP+I+DA VIP+PD +AG++P+A++VR P S+LTE V F+ KQVA YKK+RRV
Sbjct: 5 LLLSHPEILDAVVIPFPDAEAGEVPIAYVVRSPVSSLTEVDVQKFIEKQVAYYKKLRRVT 184
Query: 441 FVSAIPKSPAGKILRRELVEQAVS 512
FV ++PKS +GKILRREL+ + S
Sbjct: 185 FVDSVPKSASGKILRRELIAKVRS 256
>gb|CW029877.1|CW029877 104_257_10499927_116_30402 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10499927, DNA
sequence
Length = 812
Score = 63.4 bits (132), Expect(3) = 4e-027
Identities = 23/35 (65%), Positives = 31/35 (88%)
Frame = +3 / -3
Query: 306 YPDEDAGQLPMAFIVRKPGSNLTEQQVMDFVAKQV 410
+PD + GQ PMA++VRK GSNL+E++VM+FVAKQV
Sbjct: 573 FPDREVGQFPMAYVVRKKGSNLSEREVMEFVAKQV 469
Score = 60.2 bits (125), Expect(3) = 4e-027
Identities = 24/36 (66%), Positives = 32/36 (88%)
Frame = +3 / -1
Query: 405 QVAPYKKVRRVAFVSAIPKSPAGKILRRELVEQAVS 512
QVAPYKKVR+VAFV+ IPK+ +GKILR++L++ A S
Sbjct: 317 QVAPYKKVRKVAFVTEIPKNASGKILRKDLIKLATS 210
Score = 40.0 bits (81), Expect(3) = 4e-027
Identities = 16/24 (66%), Positives = 19/24 (79%)
Frame = +3 / -2
Query: 234 QVPPAELEHILNSHPDIMDAAVIP 305
QVPPAELE +L +H +I D AVIP
Sbjct: 730 QVPPAELEALLLTHSEIQDVAVIP 659
>gb|CW345534.1|CW345534 104_848_11488543_148_36210_022 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11488543, DNA
sequence
Length = 632
Score = 102 bits (217), Expect(2) = 2e-026
Identities = 39/74 (52%), Positives = 56/74 (75%)
Frame = +3 / +3
Query: 87 SGYVGDDEATAATVDSEGWLKTGXXXYFNEDGLLYIVDRLKELIKYKGYQVPPAELEHIL 266
SGY+ + +AT ++D++GWL TG + ++D ++IVDRLKE+IKYKG QV PAE+E +L
Sbjct: 12 SGYLNNPDATKNSIDADGWLHTGDVGFVDDDDEIFIVDRLKEIIKYKGLQVAPAEIEALL 191
Query: 267 NSHPDIMDAAVIPY 308
+HP I DAAV+ Y
Sbjct: 192 ITHPSIADAAVVGY 233
Score = 40.0 bits (81), Expect(2) = 2e-026
Identities = 14/33 (42%), Positives = 23/33 (69%)
Frame = +3 / +3
Query: 312 DEDAGQLPMAFIVRKPGSNLTEQQVMDFVAKQV 410
+ + G++P+AF+ + GS L+E V FVAK+V
Sbjct: 357 EPEIGEIPVAFVAKAKGSELSEDDVKQFVAKEV 455
>gb|CD424257.1|CD424257 SA1_4_H11.b1_A002 Salicylic acid-treated seedlings Sorghum bicolor
cDNA clone SA1_4_H11_A002 3', mRNA sequence
Length = 584
Score = 119 bits (255), Expect = 4e-026
Identities = 47/80 (58%), Positives = 64/80 (80%)
Frame = +3 / +1
Query: 273 HPDIMDAAVIPYPDEDAGQLPMAFIVRKPGSNLTEQQVMDFVAKQVAPYKKVRRVAFVSA 452
HP+I+DA VIP+PD +AG++P+A++VR P S+LTE V F+ KQVA YKK+RRV FV +
Sbjct: 1 HPEILDAVVIPFPDAEAGEVPIAYVVRSPVSSLTEVDVQKFIEKQVAYYKKLRRVPFVDS 180
Query: 453 IPKSPAGKILRRELVEQAVS 512
+PKS +GKILRREL+ + S
Sbjct: 181 VPKSASGKILRRELIAKVRS 240
>gb|CW208270.1|CW208270 104_637_11188585_116_37043_003 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11188585, DNA
sequence
Length = 625
Score = 80.8 bits (170), Expect(2) = 6e-026
Identities = 33/62 (53%), Positives = 49/62 (79%)
Frame = +3 / +3
Query: 309 PDEDAGQLPMAFIVRKPGSNLTEQQVMDFVAKQVAPYKKVRRVAFVSAIPKSPAGKILRR 488
PDE+AG++P + +VR+ G+ +E +M +VA++VA YKK+R + FV AIPKS +GKILRR
Sbjct: 183 PDEEAGEVPASCVVRRRGAPESEADMMAYVAERVASYKKLRLLRFVDAIPKSVSGKILRR 362
Query: 489 EL 494
+L
Sbjct: 363 QL 368
Score = 57.9 bits (120), Expect(2) = 6e-026
Identities = 24/32 (75%), Positives = 27/32 (84%)
Frame = +3 / +1
Query: 204 LKELIKYKGYQVPPAELEHILNSHPDIMDAAV 299
+KELIKYKG+QV PAELE IL SHP + DAAV
Sbjct: 1 IKELIKYKGFQVAPAELEAILLSHPSVEDAAV 96
>gb|CW445621.1|CW445621 fsbb001f170n20k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f170n20, DNA
sequence
Length = 679
Score = 63.4 bits (132), Expect(3) = 1e-025
Identities = 24/35 (68%), Positives = 29/35 (82%)
Frame = +3 / -1
Query: 135 EGWLKTGXXXYFNEDGLLYIVDRLKELIKYKGYQV 239
+GWL TG YF+E G L++VDRLKELIKYKG+QV
Sbjct: 634 QGWLHTGDLGYFDERGQLHVVDRLKELIKYKGFQV 530
Score = 50.1 bits (103), Expect(3) = 1e-025
Identities = 18/35 (51%), Positives = 26/35 (74%)
Frame = +3 / -2
Query: 306 YPDEDAGQLPMAFIVRKPGSNLTEQQVMDFVAKQV 410
YPD +AG++P+A++VR P S+L E V F+ KQV
Sbjct: 207 YPDPEAGEVPIAYVVRSPKSSLAEVDVQKFIEKQV 103
Score = 44.6 bits (91), Expect(3) = 1e-025
Identities = 17/25 (68%), Positives = 22/25 (88%)
Frame = +3 / -1
Query: 231 YQVPPAELEHILNSHPDIMDAAVIP 305
+Q+ PAELE +L SHP+I+DAAVIP
Sbjct: 361 WQIAPAELEGLLLSHPEILDAAVIP 287
>gb|CW071495.1|CW071495 104_323_10591543_114_30471 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10591543, DNA
sequence
Length = 740
Score = 113 bits (242), Expect = 2e-024
Identities = 45/73 (61%), Positives = 57/73 (78%)
Frame = +3 / +3
Query: 87 SGYVGDDEATAATVDSEGWLKTGXXXYFNEDGLLYIVDRLKELIKYKGYQVPPAELEHIL 266
+GY+ + EATA T+D EGWL TG Y ++D ++IVDRLKELIKYKG+QV PAELE +L
Sbjct: 417 AGYLNNPEATAKTIDDEGWLHTGDIGYVDDDDEIFIVDRLKELIKYKGFQVAPAELEAML 596
Query: 267 NSHPDIMDAAVIP 305
+HP I DAAV+P
Sbjct: 597 IAHPSIADAAVVP 635
>gb|CW077966.1|CW077966 104_386_10894698_116_31912_378 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10894698, DNA
sequence
Length = 739
Score = 113 bits (242), Expect = 2e-024
Identities = 45/73 (61%), Positives = 57/73 (78%)
Frame = +3 / +1
Query: 87 SGYVGDDEATAATVDSEGWLKTGXXXYFNEDGLLYIVDRLKELIKYKGYQVPPAELEHIL 266
+GY+ + EATA T+D EGWL TG Y ++D ++IVDRLKELIKYKG+QV PAELE +L
Sbjct: 481 AGYLNNPEATAKTIDDEGWLHTGDIGYVDDDDEIFIVDRLKELIKYKGFQVAPAELEAML 660
Query: 267 NSHPDIMDAAVIP 305
+HP I DAAV+P
Sbjct: 661 IAHPSIADAAVVP 699
>gb|CW077967.1|CW077967 104_386_10894698_148_31911_378 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10894698, DNA
sequence
Length = 748
Score = 113 bits (242), Expect = 2e-024
Identities = 45/73 (61%), Positives = 57/73 (78%)
Frame = +3 / -1
Query: 87 SGYVGDDEATAATVDSEGWLKTGXXXYFNEDGLLYIVDRLKELIKYKGYQVPPAELEHIL 266
+GY+ + EATA T+D EGWL TG Y ++D ++IVDRLKELIKYKG+QV PAELE +L
Sbjct: 397 AGYLNNPEATAKTIDDEGWLHTGDIGYVDDDDEIFIVDRLKELIKYKGFQVAPAELEAML 218
Query: 267 NSHPDIMDAAVIP 305
+HP I DAAV+P
Sbjct: 217 IAHPSIADAAVVP 179
>gb|CW271688.1|CW271688 104_744_11403133_116_36221_063 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11403133, DNA
sequence
Length = 655
Score = 57.4 bits (119), Expect(3) = 6e-024
Identities = 26/48 (54%), Positives = 34/48 (70%)
Frame = +3 / -1
Query: 405 QVAPYKKVRRVAFVSAIPKSPAGKILRRELVEQAVSMGTSKL*SLKFI 548
QVA YK++R+V FV ++PKS AGKILRREL+ Q S ++ L FI
Sbjct: 175 QVAHYKRLRKVKFVDSVPKSAAGKILRRELIAQVRSSKL*RIDLLNFI 32
Score = 50.1 bits (103), Expect(3) = 6e-024
Identities = 18/35 (51%), Positives = 26/35 (74%)
Frame = +3 / -3
Query: 306 YPDEDAGQLPMAFIVRKPGSNLTEQQVMDFVAKQV 410
YPD +AG++P+A++VR P S+L E V F+ KQV
Sbjct: 467 YPDPEAGEVPIAYVVRSPKSSLAEVDVQKFIEKQV 363
Score = 44.6 bits (91), Expect(3) = 6e-024
Identities = 17/25 (68%), Positives = 22/25 (88%)
Frame = +3 / -2
Query: 231 YQVPPAELEHILNSHPDIMDAAVIP 305
+Q+ PAELE +L SHP+I+DAAVIP
Sbjct: 621 WQIAPAELEGLLLSHPEILDAAVIP 547
>gb|CW220527.1|CW220527 104_655_11197397_116_37153_027 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11197397, DNA
sequence
Length = 664
Score = 55.1 bits (114), Expect(3) = 8e-023
Identities = 23/36 (63%), Positives = 29/36 (80%)
Frame = +3 / +2
Query: 405 QVAPYKKVRRVAFVSAIPKSPAGKILRRELVEQAVS 512
QVA YKK+RRV FV ++PKS +GKILRREL+ + S
Sbjct: 473 QVAYYKKLRRVTFVDSVPKSASGKILRRELIAKVRS 580
Score = 50.6 bits (104), Expect(3) = 8e-023
Identities = 18/36 (50%), Positives = 28/36 (77%)
Frame = +3 / +2
Query: 306 YPDEDAGQLPMAFIVRKPGSNLTEQQVMDFVAKQVA 413
+PD +AG++P+A++VR P S+LTE V F+ KQV+
Sbjct: 200 FPDAEAGEVPIAYVVRSPVSSLTEVDVQKFIEKQVS 307
Score = 42.8 bits (87), Expect(3) = 8e-023
Identities = 16/25 (64%), Positives = 21/25 (84%)
Frame = +3 / +3
Query: 231 YQVPPAELEHILNSHPDIMDAAVIP 305
+Q+ PAELE +L SHP+I+DA VIP
Sbjct: 18 WQIAPAELEGLLLSHPEILDAVVIP 92
>gb|CW311232.1|CW311232 104_800_11470125_148_35757_085 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11470125, DNA
sequence
Length = 682
Score = 55.1 bits (114), Expect(3) = 8e-023
Identities = 23/36 (63%), Positives = 29/36 (80%)
Frame = +3 / +3
Query: 405 QVAPYKKVRRVAFVSAIPKSPAGKILRRELVEQAVS 512
QVA YKK+RRV FV ++PKS +GKILRREL+ + S
Sbjct: 489 QVAYYKKLRRVTFVDSVPKSASGKILRRELIAKVRS 596
Score = 50.6 bits (104), Expect(3) = 8e-023
Identities = 18/36 (50%), Positives = 28/36 (77%)
Frame = +3 / +3
Query: 306 YPDEDAGQLPMAFIVRKPGSNLTEQQVMDFVAKQVA 413
+PD +AG++P+A++VR P S+LTE V F+ KQV+
Sbjct: 216 FPDAEAGEVPIAYVVRSPVSSLTEVDVQKFIEKQVS 323
Score = 42.8 bits (87), Expect(3) = 8e-023
Identities = 16/25 (64%), Positives = 21/25 (84%)
Frame = +3 / +1
Query: 231 YQVPPAELEHILNSHPDIMDAAVIP 305
+Q+ PAELE +L SHP+I+DA VIP
Sbjct: 34 WQIAPAELEGLLLSHPEILDAVVIP 108
>gb|CW194265.1|CW194265 104_617_11180005_148_36791_057 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11180005, DNA
sequence
Length = 706
Score = 55.1 bits (114), Expect(3) = 9e-023
Identities = 23/36 (63%), Positives = 29/36 (80%)
Frame = +3 / -1
Query: 405 QVAPYKKVRRVAFVSAIPKSPAGKILRRELVEQAVS 512
QVA YKK+RRV FV ++PKS +GKILRREL+ + S
Sbjct: 220 QVAYYKKLRRVTFVDSVPKSASGKILRRELIAKVRS 113
Score = 50.6 bits (104), Expect(3) = 9e-023
Identities = 18/36 (50%), Positives = 28/36 (77%)
Frame = +3 / -1
Query: 306 YPDEDAGQLPMAFIVRKPGSNLTEQQVMDFVAKQVA 413
+PD +AG++P+A++VR P S+LTE V F+ KQV+
Sbjct: 493 FPDAEAGEVPIAYVVRSPVSSLTEVDVQKFIEKQVS 386
Score = 42.8 bits (87), Expect(3) = 9e-023
Identities = 16/25 (64%), Positives = 21/25 (84%)
Frame = +3 / -2
Query: 231 YQVPPAELEHILNSHPDIMDAAVIP 305
+Q+ PAELE +L SHP+I+DA VIP
Sbjct: 675 WQIAPAELEGLLLSHPEILDAVVIP 601
>gb|CW271687.1|CW271687 104_744_11403133_116_35346_063 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11403133, DNA
sequence
Length = 627
Score = 51.5 bits (106), Expect(3) = 3e-022
Identities = 24/48 (50%), Positives = 32/48 (66%)
Frame = +3 / -3
Query: 405 QVAPYKKVRRVAFVSAIPKSPAGKILRRELVEQAVSMGTSKL*SLKFI 548
QVA YK++R+V V ++PKS AGK LRREL+ Q S ++ L FI
Sbjct: 175 QVAHYKRLRKVKSVDSVPKSAAGKTLRRELIAQVRSSKL*RIDLLNFI 32
Score = 50.1 bits (103), Expect(3) = 3e-022
Identities = 18/35 (51%), Positives = 26/35 (74%)
Frame = +3 / -2
Query: 306 YPDEDAGQLPMAFIVRKPGSNLTEQQVMDFVAKQV 410
YPD +AG++P+A++VR P S+L E V F+ KQV
Sbjct: 467 YPDPEAGEVPIAYVVRSPKSSLAEVDVQKFIEKQV 363
Score = 44.6 bits (91), Expect(3) = 3e-022
Identities = 17/25 (68%), Positives = 22/25 (88%)
Frame = +3 / -1
Query: 231 YQVPPAELEHILNSHPDIMDAAVIP 305
+Q+ PAELE +L SHP+I+DAAVIP
Sbjct: 621 WQIAPAELEGLLLSHPEILDAAVIP 547
>gb|CW034153.1|CW034153 104_264_10502381_115_30380 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10502381, DNA
sequence
Length = 541
Score = 78.5 bits (165), Expect(2) = 4e-022
Identities = 30/46 (65%), Positives = 40/46 (86%)
Frame = +3 / -2
Query: 165 YFNEDGLLYIVDRLKELIKYKGYQVPPAELEHILNSHPDIMDAAVI 302
Y ++D ++IVDRLKE+IKYKG+QVPPAELE +L +HP+I DAAV+
Sbjct: 531 YVDDDDEIFIVDRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVV 394
Score = 47.3 bits (97), Expect(2) = 4e-022
Identities = 18/33 (54%), Positives = 26/33 (78%)
Frame = +3 / -2
Query: 312 DEDAGQLPMAFIVRKPGSNLTEQQVMDFVAKQV 410
D+ AG++P+AFIVR GS +TE ++ FVAK+V
Sbjct: 288 DDLAGEIPVAFIVRTEGSEVTEDEIKQFVAKEV 190
>gb|CF432526.1|CF432526 NIT1_17_E08.b1_A002 Nitrogen-deficient seedlings Sorghum bicolor
cDNA clone NIT1_17_E08_A002 3', mRNA sequence
Length = 516
Score = 106 bits (226), Expect = 4e-022
Identities = 43/78 (55%), Positives = 60/78 (76%)
Frame = +3 / +1
Query: 279 DIMDAAVIPYPDEDAGQLPMAFIVRKPGSNLTEQQVMDFVAKQVAPYKKVRRVAFVSAIP 458
+I+DA VIP+PD +AG++P+ ++VR P S+LTE V F+ KQVA KK+RRV FV ++P
Sbjct: 1 EILDAVVIPFPDAEAGEVPIPYVVRSPVSSLTEVDVQKFIEKQVAYSKKLRRVPFVDSVP 180
Query: 459 KSPAGKILRRELVEQAVS 512
KS +GKILRREL+ + S
Sbjct: 181 KSASGKILRRELIAKVRS 234
>gb|CW304120.1|CW304120 104_788_11465610_148_35698_065 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11465610, DNA
sequence
Length = 672
Score = 64.3 bits (134), Expect(3) = 9e-022
Identities = 24/36 (66%), Positives = 30/36 (83%)
Frame = +3 / +1
Query: 132 SEGWLKTGXXXYFNEDGLLYIVDRLKELIKYKGYQV 239
++GWL+TG YF+ DG LYIV RLKE+IKYKG+QV
Sbjct: 187 NDGWLRTGDIAYFDFDGYLYIVGRLKEVIKYKGFQV 294
Score = 47.8 bits (98), Expect(3) = 9e-022
Identities = 18/30 (60%), Positives = 26/30 (86%)
Frame = +3 / +3
Query: 312 DEDAGQLPMAFIVRKPGSNLTEQQVMDFVA 401
D++AG++P+AF+VRK GS L+ QVMD+VA
Sbjct: 582 DKEAGEIPVAFVVRKSGSGLSCTQVMDYVA 671
Score = 32.7 bits (65), Expect(3) = 9e-022
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = +3 / +2
Query: 234 QVPPAELEHILNSHPDIMDAAV 299
Q+ PA+LE IL HP I+D AV
Sbjct: 419 QIAPADLEAILIEHPGIVDVAV 484
>gb|CW362994.1|CW362994 fsbb001f034f02k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f034f02, DNA
sequence
Length = 687
Score = 104 bits (222), Expect = 1e-021
Identities = 41/73 (56%), Positives = 53/73 (72%)
Frame = +3 / -1
Query: 81 IFSGYVGDDEATAATVDSEGWLKTGXXXYFNEDGLLYIVDRLKELIKYKGYQVPPAELEH 260
+ GY E T T+D++GWL TG Y ++DG +++VDR+KELIKYKG+QV PAELE
Sbjct: 342 VMQGYYRKKEETERTIDAKGWLHTGDVGYIDDDGDVFVVDRIKELIKYKGFQVAPAELEA 163
Query: 261 ILNSHPDIMDAAV 299
IL SHP + DAAV
Sbjct: 162 ILLSHPSVEDAAV 124
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 822,047,377
Number of Sequences: 832831
Number of extensions: 10841460
Number of successful extensions: 72471
Number of sequences better than 1.0e-020: 58
length of database: 163,786,556
effective HSP length: 54
effective length of database: 118,813,682
effective search space used: 22099344852
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)