TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 1366945.2.1
(1191 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AW680192.1|AW680192 WS1_4_C09.g1_A002 Water-stressed 1 (... 120 1e-056
gb|BG605888.1|BG605888 RHIZ2_82_G10.g1_A003 Rhizome2 (RHIZ2... 120 1e-056
gb|CD224909.1|CD224909 CCC1_37_A05.b1_A007 Callus culture/c... 120 1e-056
gb|BE356504.1|BE356504 DG1_125_G03.g1_A002 Dark Grown 1 (DG... 120 2e-056
gb|CN131344.1|CN131344 RHOH1_47_H10.b1_A002 Acid- and alkal... 120 2e-056
gb|DN552493.1|DN552493 pSHR-RT-A-H1_C07_C085 pSHR Sorghum h... 120 2e-056
gb|BE355488.1|BE355488 DG1_114_G02.g1_A002 Dark Grown 1 (DG... 120 4e-056
gb|BE361712.1|BE361712 DG1_81_C11.g1_A002 Dark Grown 1 (DG1... 120 4e-056
gb|BE356481.1|BE356481 DG1_125_C07.g1_A002 Dark Grown 1 (DG... 120 4e-056
gb|CL181053.1|CL181053 104_391_10896478_148_31927_238 Sorgh... 120 4e-056
gb|AW678398.1|AW678398 WS1_15_E05.g1_A002 Water-stressed 1 ... 120 4e-056
gb|BE918392.1|BE918392 OV1_3_A07.g1_A002 Ovary 1 (OV1) Sorg... 120 2e-055
gb|BE363177.1|BE363177 DG1_9_H02.g1_A002 Dark Grown 1 (DG1)... 120 3e-053
gb|CD225604.1|CD225604 CCC1_40_G02.b1_A007 Callus culture/c... 120 2e-050
gb|BE359733.1|BE359733 DG1_56_H08.g2_A002 Dark Grown 1 (DG1... 120 5e-050
gb|CD227391.1|CD227391 CCC1_51_H09.b1_A007 Callus culture/c... 120 6e-047
gb|BG103002.1|BG103002 RHIZ2_35_H06.b1_A003 Rhizome2 (RHIZ2... 120 5e-046
gb|BE355170.1|BE355170 DG1_10_F05.g1_A002 Dark Grown 1 (DG1... 120 2e-044
gb|BG487912.1|BG487912 RHIZ2_60_H06.g1_A003 Rhizome2 (RHIZ2... 120 4e-044
gb|CW038952.1|CW038952 104_271_10505213_114_30387 Sorghum m... 120 2e-039
gb|CL157536.1|CL157536 104_345_10783651_114_31477_211 Sorgh... 94 5e-037
gb|CN139453.1|CN139453 OX1_22_E01.b1_A002 Oxidatively-stres... 94 5e-037
gb|AW672235.1|AW672235 LG1_358_E01.b1_A002 Light Grown 1 (L... 94 5e-037
gb|AW923615.1|AW923615 DG1_56_H08.g1_A002 Dark Grown 1 (DG1... 120 4e-035
gb|CF427555.1|CF427555 PH1_16_E07.b1_A002 Phosphorous-defic... 120 9e-034
gb|CW118138.1|CW118138 104_494_11108040_148_34621_088 Sorgh... 83 4e-029
gb|CL177480.1|CL177480 104_384_10893857_148_31915_305 Sorgh... 80 3e-027
gb|BE593178.1|BE593178 WS1_98_E03.g1_A002 Water-stressed 1 ... 120 7e-027
gb|BG050374.1|BG050374 FM1_53_C07.g1_A003 Floral-Induced Me... 120 5e-026
gb|BG558117.1|BG558117 RHIZ2_67_A09.g1_A003 Rhizome2 (RHIZ2... 120 5e-026
gb|CW218469.1|CW218469 104_652_11196207_116_37528_062 Sorgh... 82 6e-026
gb|CN146426.1|CN146426 WOUND1_41_D07.b1_A002 Wounded leaves... 82 6e-026
gb|BG605826.1|BG605826 RHIZ2_81_H11.g1_A003 Rhizome2 (RHIZ2... 82 6e-026
gb|CX618502.1|CX618502 GABR1_40_B04.b1_A002 GA- or brassino... 82 6e-026
gb|CW111253.1|CW111253 104_484_11104205_148_34527_023 Sorgh... 82 6e-026
gb|BE356755.1|BE356755 DG1_12_C08.g1_A002 Dark Grown 1 (DG1... 82 6e-026
gb|CW368566.1|CW368566 fsbb001f042j11k0 Sorghum methylation... 82 6e-026
gb|AW285132.1|AW285132 LG1_206_E11.g1_A002 Light Grown 1 (L... 82 6e-026
gb|CD235852.1|CD235852 SS1_24_D08.b1_A012 Salt-stressed see... 82 6e-026
gb|AW282975.1|AW282975 LG1_206_D03.g1_A002 Light Grown 1 (L... 82 6e-026
gb|CD236573.1|CD236573 SS1_35_F07.b1_A012 Salt-stressed see... 82 6e-026
gb|AW676674.1|AW676674 DG1_13_H08.g1_A002 Dark Grown 1 (DG1... 82 6e-026
gb|BE352863.1|BE352863 LG1_267_G09.g1_A002 Light Grown 1 (L... 82 6e-026
gb|BE352864.1|BE352864 LG1_267_G10.g1_A002 Light Grown 1 (L... 82 6e-026
gb|CW323273.1|CW323273 104_817_11476543_148_35960_026 Sorgh... 84 2e-025
gb|CW275098.1|CW275098 104_748_11404780_148_35385_012 Sorgh... 84 2e-025
gb|CX621250.1|CX621250 GABR1_57_A12.b1_A002 GA- or brassino... 81 2e-025
gb|CF771208.1|CF771208 DSBF1_15_F05.g1_A010 Drought-stresse... 76 4e-025
gb|BG558983.1|BG558983 RHIZ2_53_B08.g1_A003 Rhizome2 (RHIZ2... 114 6e-025
gb|BE361720.1|BE361720 DG1_81_C01.g1_A002 Dark Grown 1 (DG1... 74 1e-024
gb|BG465900.1|BG465900 RHIZ2_46_A05.g1_A003 Rhizome2 (RHIZ2... 74 1e-024
gb|BG559972.1|BG559972 RHIZ2_75_H09.g1_A003 Rhizome2 (RHIZ2... 74 1e-024
gb|AW924499.1|AW924499 WS1_70_C10.b1_A002 Water-stressed 1 ... 74 1e-024
gb|AW286181.1|AW286181 LG1_328_E01.g1_A002 Light Grown 1 (L... 74 1e-024
gb|BG487842.1|BG487842 RHIZ2_60_A07.g1_A003 Rhizome2 (RHIZ2... 110 1e-023
gb|CW037357.1|CW037357 104_269_10504294_114_30383 Sorghum m... 83 2e-023
gb|BG102496.1|BG102496 RHIZ2_33_G06.g1_A003 Rhizome2 (RHIZ2... 64 1e-022
gb|CN143916.1|CN143916 WOUND1_19_D07.b1_A002 Wounded leaves... 69 1e-022
gb|CX609326.1|CX609326 ANR1_12_B05.b1_A002 Anaerobic roots ... 69 1e-022
gb|CX609201.1|CX609201 ANR1_11_F09.b1_A002 Anaerobic roots ... 69 1e-022
gb|CW299073.1|CW299073 104_781_11462920_148_35657_050 Sorgh... 69 1e-022
gb|BE355210.1|BE355210 DG1_10_F11.g1_A002 Dark Grown 1 (DG1... 69 1e-022
gb|CF427951.1|CF427951 PH1_11_F08.g1_A002 Phosphorous-defic... 69 1e-022
gb|CF429943.1|CF429943 PH1_25_F09.b1_A002 Phosphorous-defic... 69 1e-022
gb|CN151725.1|CN151725 WOUND1_77_E10.b1_A002 Wounded leaves... 69 1e-022
gb|CW289115.1|CW289115 104_767_11412305_148_35537_065 Sorgh... 69 1e-022
gb|BE359944.1|BE359944 DG1_58_G02.g2_A002 Dark Grown 1 (DG1... 69 1e-022
gb|BZ779779.1|BZ779779 ii34e07.g1 WGS-SbicolorF (DH5a methy... 65 2e-022
gb|CW301137.1|CW301137 104_784_11464043_116_36253_034 Sorgh... 65 2e-022
gb|CW063398.1|CW063398 104_309_10521981_114_30134 Sorghum m... 65 2e-022
gb|CN139961.1|CN139961 OX1_33_E06.b1_A002 Oxidatively-stres... 65 2e-022
gb|AW922831.1|AW922831 DG1_46_D12.g1_A002 Dark Grown 1 (DG1... 65 2e-022
gb|BG557261.1|BG557261 EM1_44_F08.g1_A002 Embryo 1 (EM1) So... 65 2e-022
gb|CF428894.1|CF428894 PH1_18_D09.b1_A002 Phosphorous-defic... 65 2e-022
gb|CD428029.1|CD428029 ETH1_32_H05.b1_A002 Ethylene-treated... 69 3e-022
gb|BE356646.1|BE356646 DG1_126_C05.g1_A002 Dark Grown 1 (DG... 83 4e-022
gb|CW396805.1|CW396805 fsbb001f085g15k0 Sorghum methylation... 105 5e-022
gb|BZ779778.1|BZ779778 ii34e07.b1 WGS-SbicolorF (DH5a methy... 65 7e-022
gb|CX616461.1|CX616461 GABR1_28_C04.b1_A002 GA- or brassino... 63 7e-022
gb|AW924610.1|AW924610 WS1_70_C10.g1_A002 Water-stressed 1 ... 65 1e-021
gb|CW370182.1|CW370182 fsbb001f044p12f0 Sorghum methylation... 82 1e-021
gb|CW360174.1|CW360174 fsbb001f028c08k0 Sorghum methylation... 82 1e-021
gb|BG355958.2|BG355958 EM1_18_F11.g1_A002 Embryo 1 (EM1) So... 70 1e-021
gb|CN131128.1|CN131128 RHOH1_46_C04.b1_A002 Acid- and alkal... 66 1e-021
gb|CD236019.1|CD236019 SS1_25_C10.b1_A012 Salt-stressed see... 69 1e-021
gb|BG462993.1|BG462993 EM1_46_C02.g1_A002 Embryo 1 (EM1) So... 70 1e-021
gb|CD462816.1|CD462816 ETH1_40_H10.b1_A002 Ethylene-treated... 64 2e-021
gb|CW458296.1|CW458296 fsbb001f204i05f0 Sorghum methylation... 69 3e-021
gb|CL187049.1|CL187049 104_402_10900616_116_32435_026 Sorgh... 64 4e-021
gb|CL187048.1|CL187048 104_402_10900616_114_32431_026 Sorgh... 64 4e-021
>gb|AW680192.1|AW680192 WS1_4_C09.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA, mRNA
sequence
Length = 613
Score = 120 bits (257), Expect(3) = 1e-056
Identities = 44/50 (88%), Positives = 48/50 (96%)
Frame = +1 / +3
Query: 1 RLYASLWNADDWATQGGRVKADWSKAPFVASFRGFSADACVWDGGRQRCP 150
RLYASLWNADDWATQGGRVKADW++APFVASFRGFSADACVW G+Q+CP
Sbjct: 3 RLYASLWNADDWATQGGRVKADWTQAPFVASFRGFSADACVWANGKQQCP 152
Score = 120 bits (256), Expect(3) = 1e-056
Identities = 45/46 (97%), Positives = 45/46 (97%)
Frame = +1 / +3
Query: 202 WWNQQLSDMSYRRMRWVQRKFMIYNYCADAKRFPQGVPAECKLR*G 339
WWNQQLSDMSYRRMRWVQRKFMIYNYC DAKRFPQGVPAECKLR*G
Sbjct: 207 WWNQQLSDMSYRRMRWVQRKFMIYNYCTDAKRFPQGVPAECKLR*G 344
Score = 102 bits (218), Expect(3) = 1e-039
Identities = 42/46 (91%), Positives = 42/46 (91%)
Frame = -2 / -1
Query: 338 PHRSLHSAGTPCGKRLASAQ*L*IMNLRCTQRMRR*LMSLSCWFHQ 201
PHRSLHSAGTPCG RLAS Q*L*IMN CTQRMRR*LMSLSCWFHQ
Sbjct: 343 PHRSLHSAGTPCGNRLASVQ*L*IMNFLCTQRMRR*LMSLSCWFHQ 206
Score = 81.7 bits (172), Expect(3) = 1e-039
Identities = 35/50 (70%), Positives = 38/50 (76%)
Frame = -2 / -1
Query: 152 SGQRCLPPSQTQASALKPRKEATKGALDQSALTRPPCVAQSSAFHRLAYS 3
+G C P + T ASAL PR +AT GA QSALTRPPCVAQSSAF RLAYS
Sbjct: 154 TGHCCFPFAHTHASALNPRNDATNGACVQSALTRPPCVAQSSAFQRLAYS 5
Score = 24.4 bits (47), Expect(3) = 1e-056
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = +2 / +2
Query: 479 MVSCKCSSSRVAFFDLLF 532
+ CKCS+ FF L F
Sbjct: 494 LAQCKCSTHLALFFHLFF 547
Score = 23.5 bits (45), Expect(3) = 1e-039
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = -2 / -3
Query: 527 TNQRMRHD*SYIYMTP 480
TN+R+ D YIY+ P
Sbjct: 542 TNERIMRDACYIYIVP 495
>gb|BG605888.1|BG605888 RHIZ2_82_G10.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 647
Score = 120 bits (257), Expect(3) = 1e-056
Identities = 44/50 (88%), Positives = 48/50 (96%)
Frame = +1 / +1
Query: 1 RLYASLWNADDWATQGGRVKADWSKAPFVASFRGFSADACVWDGGRQRCP 150
RLYASLWNADDWATQGGRVKADW++APFVASFRGFSADACVW G+Q+CP
Sbjct: 67 RLYASLWNADDWATQGGRVKADWTQAPFVASFRGFSADACVWANGKQQCP 216
Score = 120 bits (256), Expect(3) = 1e-056
Identities = 45/46 (97%), Positives = 45/46 (97%)
Frame = +1 / +1
Query: 202 WWNQQLSDMSYRRMRWVQRKFMIYNYCADAKRFPQGVPAECKLR*G 339
WWNQQLSDMSYRRMRWVQRKFMIYNYC DAKRFPQGVPAECKLR*G
Sbjct: 271 WWNQQLSDMSYRRMRWVQRKFMIYNYCTDAKRFPQGVPAECKLR*G 408
Score = 102 bits (218), Expect(3) = 1e-039
Identities = 42/46 (91%), Positives = 42/46 (91%)
Frame = -2 / -1
Query: 338 PHRSLHSAGTPCGKRLASAQ*L*IMNLRCTQRMRR*LMSLSCWFHQ 201
PHRSLHSAGTPCG RLAS Q*L*IMN CTQRMRR*LMSLSCWFHQ
Sbjct: 407 PHRSLHSAGTPCGNRLASVQ*L*IMNFLCTQRMRR*LMSLSCWFHQ 270
Score = 81.7 bits (172), Expect(3) = 1e-039
Identities = 35/50 (70%), Positives = 38/50 (76%)
Frame = -2 / -1
Query: 152 SGQRCLPPSQTQASALKPRKEATKGALDQSALTRPPCVAQSSAFHRLAYS 3
+G C P + T ASAL PR +AT GA QSALTRPPCVAQSSAF RLAYS
Sbjct: 218 TGHCCFPFAHTHASALNPRNDATNGACVQSALTRPPCVAQSSAFQRLAYS 69
Score = 24.4 bits (47), Expect(3) = 1e-056
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = +2 / +3
Query: 479 MVSCKCSSSRVAFFDLLF 532
+ CKCS+ FF L F
Sbjct: 558 LAQCKCSTHLALFFHLFF 611
Score = 23.5 bits (45), Expect(3) = 1e-039
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = -2 / -3
Query: 527 TNQRMRHD*SYIYMTP 480
TN+R+ D YIY+ P
Sbjct: 606 TNERIMRDACYIYIVP 559
>gb|CD224909.1|CD224909 CCC1_37_A05.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_37_A05_A007 3', mRNA sequence
Length = 667
Score = 120 bits (257), Expect(3) = 1e-056
Identities = 44/50 (88%), Positives = 48/50 (96%)
Frame = +1 / +2
Query: 1 RLYASLWNADDWATQGGRVKADWSKAPFVASFRGFSADACVWDGGRQRCP 150
RLYASLWNADDWATQGGRVKADW++APFVASFRGFSADACVW G+Q+CP
Sbjct: 59 RLYASLWNADDWATQGGRVKADWTQAPFVASFRGFSADACVWANGKQQCP 208
Score = 120 bits (256), Expect(3) = 1e-056
Identities = 45/46 (97%), Positives = 45/46 (97%)
Frame = +1 / +2
Query: 202 WWNQQLSDMSYRRMRWVQRKFMIYNYCADAKRFPQGVPAECKLR*G 339
WWNQQLSDMSYRRMRWVQRKFMIYNYC DAKRFPQGVPAECKLR*G
Sbjct: 263 WWNQQLSDMSYRRMRWVQRKFMIYNYCTDAKRFPQGVPAECKLR*G 400
Score = 102 bits (218), Expect(3) = 1e-039
Identities = 42/46 (91%), Positives = 42/46 (91%)
Frame = -2 / -2
Query: 338 PHRSLHSAGTPCGKRLASAQ*L*IMNLRCTQRMRR*LMSLSCWFHQ 201
PHRSLHSAGTPCG RLAS Q*L*IMN CTQRMRR*LMSLSCWFHQ
Sbjct: 399 PHRSLHSAGTPCGNRLASVQ*L*IMNFLCTQRMRR*LMSLSCWFHQ 262
Score = 81.7 bits (172), Expect(3) = 1e-039
Identities = 35/50 (70%), Positives = 38/50 (76%)
Frame = -2 / -2
Query: 152 SGQRCLPPSQTQASALKPRKEATKGALDQSALTRPPCVAQSSAFHRLAYS 3
+G C P + T ASAL PR +AT GA QSALTRPPCVAQSSAF RLAYS
Sbjct: 210 TGHCCFPFAHTHASALNPRNDATNGACVQSALTRPPCVAQSSAFQRLAYS 61
Score = 24.4 bits (47), Expect(3) = 1e-056
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = +2 / +1
Query: 479 MVSCKCSSSRVAFFDLLF 532
+ CKCS+ FF L F
Sbjct: 550 LAQCKCSTHLALFFHLFF 603
Score = 23.5 bits (45), Expect(3) = 1e-039
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = -2 / -1
Query: 527 TNQRMRHD*SYIYMTP 480
TN+R+ D YIY+ P
Sbjct: 598 TNERIMRDACYIYIVP 551
>gb|BE356504.1|BE356504 DG1_125_G03.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 608
Score = 120 bits (257), Expect(3) = 2e-056
Identities = 44/50 (88%), Positives = 48/50 (96%)
Frame = +1 / +2
Query: 1 RLYASLWNADDWATQGGRVKADWSKAPFVASFRGFSADACVWDGGRQRCP 150
RLYASLWNADDWATQGGRVKADW++APFVASFRGFSADACVW G+Q+CP
Sbjct: 65 RLYASLWNADDWATQGGRVKADWTQAPFVASFRGFSADACVWANGKQQCP 214
Score = 120 bits (256), Expect(3) = 2e-056
Identities = 45/46 (97%), Positives = 45/46 (97%)
Frame = +1 / +2
Query: 202 WWNQQLSDMSYRRMRWVQRKFMIYNYCADAKRFPQGVPAECKLR*G 339
WWNQQLSDMSYRRMRWVQRKFMIYNYC DAKRFPQGVPAECKLR*G
Sbjct: 269 WWNQQLSDMSYRRMRWVQRKFMIYNYCTDAKRFPQGVPAECKLR*G 406
Score = 102 bits (218), Expect(3) = 1e-039
Identities = 42/46 (91%), Positives = 42/46 (91%)
Frame = -2 / -3
Query: 338 PHRSLHSAGTPCGKRLASAQ*L*IMNLRCTQRMRR*LMSLSCWFHQ 201
PHRSLHSAGTPCG RLAS Q*L*IMN CTQRMRR*LMSLSCWFHQ
Sbjct: 405 PHRSLHSAGTPCGNRLASVQ*L*IMNFLCTQRMRR*LMSLSCWFHQ 268
Score = 81.7 bits (172), Expect(3) = 1e-039
Identities = 35/50 (70%), Positives = 38/50 (76%)
Frame = -2 / -3
Query: 152 SGQRCLPPSQTQASALKPRKEATKGALDQSALTRPPCVAQSSAFHRLAYS 3
+G C P + T ASAL PR +AT GA QSALTRPPCVAQSSAF RLAYS
Sbjct: 216 TGHCCFPFAHTHASALNPRNDATNGACVQSALTRPPCVAQSSAFQRLAYS 67
Score = 24.0 bits (46), Expect(3) = 2e-056
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +3 / +2
Query: 474 KEWCHVNVALVVSHSLIC 527
+ W +VNVA + +S IC
Sbjct: 551 RRWHNVNVARISHYSFIC 604
Score = 23.5 bits (45), Expect(3) = 1e-039
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = -2 / -2
Query: 527 TNQRMRHD*SYIYMTP 480
TN+R+ D YIY+ P
Sbjct: 604 TNERIMRDACYIYIVP 557
>gb|CN131344.1|CN131344 RHOH1_47_H10.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_47_H10_A002 3', mRNA sequence
Length = 735
Score = 120 bits (257), Expect(3) = 2e-056
Identities = 44/50 (88%), Positives = 48/50 (96%)
Frame = +1 / +2
Query: 1 RLYASLWNADDWATQGGRVKADWSKAPFVASFRGFSADACVWDGGRQRCP 150
RLYASLWNADDWATQGGRVKADW++APFVASFRGFSADACVW G+Q+CP
Sbjct: 128 RLYASLWNADDWATQGGRVKADWTQAPFVASFRGFSADACVWANGKQQCP 277
Score = 120 bits (256), Expect(3) = 2e-056
Identities = 45/46 (97%), Positives = 45/46 (97%)
Frame = +1 / +2
Query: 202 WWNQQLSDMSYRRMRWVQRKFMIYNYCADAKRFPQGVPAECKLR*G 339
WWNQQLSDMSYRRMRWVQRKFMIYNYC DAKRFPQGVPAECKLR*G
Sbjct: 332 WWNQQLSDMSYRRMRWVQRKFMIYNYCTDAKRFPQGVPAECKLR*G 469
Score = 102 bits (218), Expect(3) = 2e-039
Identities = 42/46 (91%), Positives = 42/46 (91%)
Frame = -2 / -1
Query: 338 PHRSLHSAGTPCGKRLASAQ*L*IMNLRCTQRMRR*LMSLSCWFHQ 201
PHRSLHSAGTPCG RLAS Q*L*IMN CTQRMRR*LMSLSCWFHQ
Sbjct: 468 PHRSLHSAGTPCGNRLASVQ*L*IMNFLCTQRMRR*LMSLSCWFHQ 331
Score = 81.7 bits (172), Expect(3) = 2e-039
Identities = 35/50 (70%), Positives = 38/50 (76%)
Frame = -2 / -1
Query: 152 SGQRCLPPSQTQASALKPRKEATKGALDQSALTRPPCVAQSSAFHRLAYS 3
+G C P + T ASAL PR +AT GA QSALTRPPCVAQSSAF RLAYS
Sbjct: 279 TGHCCFPFAHTHASALNPRNDATNGACVQSALTRPPCVAQSSAFQRLAYS 130
Score = 24.4 bits (47), Expect(3) = 2e-056
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = +2 / +1
Query: 479 MVSCKCSSSRVAFFDLLF 532
+ CKCS+ FF L F
Sbjct: 619 LAQCKCSTHLALFFHLFF 672
Score = 23.5 bits (45), Expect(3) = 2e-039
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = -2 / -3
Query: 527 TNQRMRHD*SYIYMTP 480
TN+R+ D YIY+ P
Sbjct: 667 TNERIMRDACYIYIVP 620
>gb|DN552493.1|DN552493 pSHR-RT-A-H1_C07_C085 pSHR Sorghum halepense cDNA, mRNA sequence
Length = 655
Score = 120 bits (257), Expect(3) = 2e-056
Identities = 44/50 (88%), Positives = 48/50 (96%)
Frame = +1 / -3
Query: 1 RLYASLWNADDWATQGGRVKADWSKAPFVASFRGFSADACVWDGGRQRCP 150
RLYASLWNADDWATQGGRVKADW++APFVASFRGFSADACVW G+Q+CP
Sbjct: 650 RLYASLWNADDWATQGGRVKADWTQAPFVASFRGFSADACVWANGKQQCP 501
Score = 120 bits (256), Expect(3) = 2e-056
Identities = 45/46 (97%), Positives = 45/46 (97%)
Frame = +1 / -3
Query: 202 WWNQQLSDMSYRRMRWVQRKFMIYNYCADAKRFPQGVPAECKLR*G 339
WWNQQLSDMSYRRMRWVQRKFMIYNYC DAKRFPQGVPAECKLR*G
Sbjct: 446 WWNQQLSDMSYRRMRWVQRKFMIYNYCTDAKRFPQGVPAECKLR*G 309
Score = 100 bits (214), Expect(2) = 9e-039
Identities = 41/46 (89%), Positives = 42/46 (91%)
Frame = -2 / +1
Query: 338 PHRSLHSAGTPCGKRLASAQ*L*IMNLRCTQRMRR*LMSLSCWFHQ 201
PHRSLHSAGTPCG RLAS Q*L*IMN CTQR+RR*LMSLSCWFHQ
Sbjct: 310 PHRSLHSAGTPCGNRLASVQ*L*IMNFLCTQRIRR*LMSLSCWFHQ 447
Score = 81.7 bits (172), Expect(2) = 9e-039
Identities = 35/50 (70%), Positives = 38/50 (76%)
Frame = -2 / +1
Query: 152 SGQRCLPPSQTQASALKPRKEATKGALDQSALTRPPCVAQSSAFHRLAYS 3
+G C P + T ASAL PR +AT GA QSALTRPPCVAQSSAF RLAYS
Sbjct: 499 TGHCCFPFAHTHASALNPRNDATNGACVQSALTRPPCVAQSSAFQRLAYS 648
Score = 24.0 bits (46), Expect(3) = 2e-056
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = +2 / -1
Query: 479 MVSCKCSSSRVAFFDLLF 532
+ CKCS+ FF L F
Sbjct: 151 LAQCKCSTHVALFFHLFF 98
>gb|BE355488.1|BE355488 DG1_114_G02.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 660
Score = 120 bits (257), Expect(2) = 4e-056
Identities = 44/50 (88%), Positives = 48/50 (96%)
Frame = +1 / +3
Query: 1 RLYASLWNADDWATQGGRVKADWSKAPFVASFRGFSADACVWDGGRQRCP 150
RLYASLWNADDWATQGGRVKADW++APFVASFRGFSADACVW G+Q+CP
Sbjct: 75 RLYASLWNADDWATQGGRVKADWTQAPFVASFRGFSADACVWANGKQQCP 224
Score = 120 bits (256), Expect(2) = 4e-056
Identities = 45/46 (97%), Positives = 45/46 (97%)
Frame = +1 / +3
Query: 202 WWNQQLSDMSYRRMRWVQRKFMIYNYCADAKRFPQGVPAECKLR*G 339
WWNQQLSDMSYRRMRWVQRKFMIYNYC DAKRFPQGVPAECKLR*G
Sbjct: 279 WWNQQLSDMSYRRMRWVQRKFMIYNYCTDAKRFPQGVPAECKLR*G 416
Score = 102 bits (218), Expect(2) = 3e-039
Identities = 42/46 (91%), Positives = 42/46 (91%)
Frame = -2 / -3
Query: 338 PHRSLHSAGTPCGKRLASAQ*L*IMNLRCTQRMRR*LMSLSCWFHQ 201
PHRSLHSAGTPCG RLAS Q*L*IMN CTQRMRR*LMSLSCWFHQ
Sbjct: 415 PHRSLHSAGTPCGNRLASVQ*L*IMNFLCTQRMRR*LMSLSCWFHQ 278
Score = 81.7 bits (172), Expect(2) = 3e-039
Identities = 35/50 (70%), Positives = 38/50 (76%)
Frame = -2 / -3
Query: 152 SGQRCLPPSQTQASALKPRKEATKGALDQSALTRPPCVAQSSAFHRLAYS 3
+G C P + T ASAL PR +AT GA QSALTRPPCVAQSSAF RLAYS
Sbjct: 226 TGHCCFPFAHTHASALNPRNDATNGACVQSALTRPPCVAQSSAFQRLAYS 77
>gb|BE361712.1|BE361712 DG1_81_C11.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 638
Score = 120 bits (257), Expect(2) = 4e-056
Identities = 44/50 (88%), Positives = 48/50 (96%)
Frame = +1 / +3
Query: 1 RLYASLWNADDWATQGGRVKADWSKAPFVASFRGFSADACVWDGGRQRCP 150
RLYASLWNADDWATQGGRVKADW++APFVASFRGFSADACVW G+Q+CP
Sbjct: 75 RLYASLWNADDWATQGGRVKADWTQAPFVASFRGFSADACVWANGKQQCP 224
Score = 120 bits (256), Expect(2) = 4e-056
Identities = 45/46 (97%), Positives = 45/46 (97%)
Frame = +1 / +3
Query: 202 WWNQQLSDMSYRRMRWVQRKFMIYNYCADAKRFPQGVPAECKLR*G 339
WWNQQLSDMSYRRMRWVQRKFMIYNYC DAKRFPQGVPAECKLR*G
Sbjct: 279 WWNQQLSDMSYRRMRWVQRKFMIYNYCTDAKRFPQGVPAECKLR*G 416
Score = 102 bits (218), Expect(2) = 3e-039
Identities = 42/46 (91%), Positives = 42/46 (91%)
Frame = -2 / -2
Query: 338 PHRSLHSAGTPCGKRLASAQ*L*IMNLRCTQRMRR*LMSLSCWFHQ 201
PHRSLHSAGTPCG RLAS Q*L*IMN CTQRMRR*LMSLSCWFHQ
Sbjct: 415 PHRSLHSAGTPCGNRLASVQ*L*IMNFLCTQRMRR*LMSLSCWFHQ 278
Score = 81.7 bits (172), Expect(2) = 3e-039
Identities = 35/50 (70%), Positives = 38/50 (76%)
Frame = -2 / -2
Query: 152 SGQRCLPPSQTQASALKPRKEATKGALDQSALTRPPCVAQSSAFHRLAYS 3
+G C P + T ASAL PR +AT GA QSALTRPPCVAQSSAF RLAYS
Sbjct: 226 TGHCCFPFAHTHASALNPRNDATNGACVQSALTRPPCVAQSSAFQRLAYS 77
>gb|BE356481.1|BE356481 DG1_125_C07.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 588
Score = 120 bits (257), Expect(2) = 4e-056
Identities = 44/50 (88%), Positives = 48/50 (96%)
Frame = +1 / +1
Query: 1 RLYASLWNADDWATQGGRVKADWSKAPFVASFRGFSADACVWDGGRQRCP 150
RLYASLWNADDWATQGGRVKADW++APFVASFRGFSADACVW G+Q+CP
Sbjct: 67 RLYASLWNADDWATQGGRVKADWTQAPFVASFRGFSADACVWANGKQQCP 216
Score = 120 bits (256), Expect(2) = 4e-056
Identities = 45/46 (97%), Positives = 45/46 (97%)
Frame = +1 / +1
Query: 202 WWNQQLSDMSYRRMRWVQRKFMIYNYCADAKRFPQGVPAECKLR*G 339
WWNQQLSDMSYRRMRWVQRKFMIYNYC DAKRFPQGVPAECKLR*G
Sbjct: 271 WWNQQLSDMSYRRMRWVQRKFMIYNYCTDAKRFPQGVPAECKLR*G 408
Score = 102 bits (218), Expect(2) = 3e-039
Identities = 42/46 (91%), Positives = 42/46 (91%)
Frame = -2 / -2
Query: 338 PHRSLHSAGTPCGKRLASAQ*L*IMNLRCTQRMRR*LMSLSCWFHQ 201
PHRSLHSAGTPCG RLAS Q*L*IMN CTQRMRR*LMSLSCWFHQ
Sbjct: 407 PHRSLHSAGTPCGNRLASVQ*L*IMNFLCTQRMRR*LMSLSCWFHQ 270
Score = 81.7 bits (172), Expect(2) = 3e-039
Identities = 35/50 (70%), Positives = 38/50 (76%)
Frame = -2 / -2
Query: 152 SGQRCLPPSQTQASALKPRKEATKGALDQSALTRPPCVAQSSAFHRLAYS 3
+G C P + T ASAL PR +AT GA QSALTRPPCVAQSSAF RLAYS
Sbjct: 218 TGHCCFPFAHTHASALNPRNDATNGACVQSALTRPPCVAQSSAFQRLAYS 69
>gb|CL181053.1|CL181053 104_391_10896478_148_31927_238 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10896478, DNA
sequence
Length = 580
Score = 120 bits (257), Expect(2) = 4e-056
Identities = 44/50 (88%), Positives = 48/50 (96%)
Frame = +1 / -2
Query: 1 RLYASLWNADDWATQGGRVKADWSKAPFVASFRGFSADACVWDGGRQRCP 150
RLYASLWNADDWATQGGRVKADW++APFVASFRGFSADACVW G+Q+CP
Sbjct: 510 RLYASLWNADDWATQGGRVKADWTQAPFVASFRGFSADACVWANGKQQCP 361
Score = 120 bits (256), Expect(2) = 4e-056
Identities = 45/46 (97%), Positives = 45/46 (97%)
Frame = +1 / -2
Query: 202 WWNQQLSDMSYRRMRWVQRKFMIYNYCADAKRFPQGVPAECKLR*G 339
WWNQQLSDMSYRRMRWVQRKFMIYNYC DAKRFPQGVPAECKLR*G
Sbjct: 306 WWNQQLSDMSYRRMRWVQRKFMIYNYCTDAKRFPQGVPAECKLR*G 169
Score = 102 bits (218), Expect(2) = 3e-039
Identities = 42/46 (91%), Positives = 42/46 (91%)
Frame = -2 / +2
Query: 338 PHRSLHSAGTPCGKRLASAQ*L*IMNLRCTQRMRR*LMSLSCWFHQ 201
PHRSLHSAGTPCG RLAS Q*L*IMN CTQRMRR*LMSLSCWFHQ
Sbjct: 170 PHRSLHSAGTPCGNRLASVQ*L*IMNFLCTQRMRR*LMSLSCWFHQ 307
Score = 81.7 bits (172), Expect(2) = 3e-039
Identities = 35/50 (70%), Positives = 38/50 (76%)
Frame = -2 / +2
Query: 152 SGQRCLPPSQTQASALKPRKEATKGALDQSALTRPPCVAQSSAFHRLAYS 3
+G C P + T ASAL PR +AT GA QSALTRPPCVAQSSAF RLAYS
Sbjct: 359 TGHCCFPFAHTHASALNPRNDATNGACVQSALTRPPCVAQSSAFQRLAYS 508
>gb|AW678398.1|AW678398 WS1_15_E05.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 567
Score = 120 bits (257), Expect(2) = 4e-056
Identities = 44/50 (88%), Positives = 48/50 (96%)
Frame = +1 / +2
Query: 1 RLYASLWNADDWATQGGRVKADWSKAPFVASFRGFSADACVWDGGRQRCP 150
RLYASLWNADDWATQGGRVKADW++APFVASFRGFSADACVW G+Q+CP
Sbjct: 35 RLYASLWNADDWATQGGRVKADWTQAPFVASFRGFSADACVWANGKQQCP 184
Score = 120 bits (256), Expect(2) = 4e-056
Identities = 45/46 (97%), Positives = 45/46 (97%)
Frame = +1 / +2
Query: 202 WWNQQLSDMSYRRMRWVQRKFMIYNYCADAKRFPQGVPAECKLR*G 339
WWNQQLSDMSYRRMRWVQRKFMIYNYC DAKRFPQGVPAECKLR*G
Sbjct: 239 WWNQQLSDMSYRRMRWVQRKFMIYNYCTDAKRFPQGVPAECKLR*G 376
Score = 102 bits (218), Expect(2) = 3e-039
Identities = 42/46 (91%), Positives = 42/46 (91%)
Frame = -2 / -1
Query: 338 PHRSLHSAGTPCGKRLASAQ*L*IMNLRCTQRMRR*LMSLSCWFHQ 201
PHRSLHSAGTPCG RLAS Q*L*IMN CTQRMRR*LMSLSCWFHQ
Sbjct: 375 PHRSLHSAGTPCGNRLASVQ*L*IMNFLCTQRMRR*LMSLSCWFHQ 238
Score = 81.7 bits (172), Expect(2) = 3e-039
Identities = 35/50 (70%), Positives = 38/50 (76%)
Frame = -2 / -1
Query: 152 SGQRCLPPSQTQASALKPRKEATKGALDQSALTRPPCVAQSSAFHRLAYS 3
+G C P + T ASAL PR +AT GA QSALTRPPCVAQSSAF RLAYS
Sbjct: 186 TGHCCFPFAHTHASALNPRNDATNGACVQSALTRPPCVAQSSAFQRLAYS 37
>gb|BE918392.1|BE918392 OV1_3_A07.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 566
Score = 120 bits (257), Expect(2) = 2e-055
Identities = 44/50 (88%), Positives = 48/50 (96%)
Frame = +1 / +3
Query: 1 RLYASLWNADDWATQGGRVKADWSKAPFVASFRGFSADACVWDGGRQRCP 150
RLYASLWNADDWATQGGRVKADW++APFVASFRGFSADACVW G+Q+CP
Sbjct: 39 RLYASLWNADDWATQGGRVKADWTQAPFVASFRGFSADACVWANGKQQCP 188
Score = 117 bits (251), Expect(2) = 2e-055
Identities = 44/46 (95%), Positives = 45/46 (97%)
Frame = +1 / +3
Query: 202 WWNQQLSDMSYRRMRWVQRKFMIYNYCADAKRFPQGVPAECKLR*G 339
WWNQQLSDMSYRRMRWVQRKFMIYN+C DAKRFPQGVPAECKLR*G
Sbjct: 243 WWNQQLSDMSYRRMRWVQRKFMIYNHCTDAKRFPQGVPAECKLR*G 380
Score = 100 bits (213), Expect(2) = 1e-038
Identities = 41/46 (89%), Positives = 41/46 (89%)
Frame = -2 / -2
Query: 338 PHRSLHSAGTPCGKRLASAQ*L*IMNLRCTQRMRR*LMSLSCWFHQ 201
PHRSLHSAGTPCG RLAS Q L*IMN CTQRMRR*LMSLSCWFHQ
Sbjct: 379 PHRSLHSAGTPCGNRLASVQWL*IMNFLCTQRMRR*LMSLSCWFHQ 242
Score = 81.7 bits (172), Expect(2) = 1e-038
Identities = 35/50 (70%), Positives = 38/50 (76%)
Frame = -2 / -2
Query: 152 SGQRCLPPSQTQASALKPRKEATKGALDQSALTRPPCVAQSSAFHRLAYS 3
+G C P + T ASAL PR +AT GA QSALTRPPCVAQSSAF RLAYS
Sbjct: 190 TGHCCFPFAHTHASALNPRNDATNGACVQSALTRPPCVAQSSAFQRLAYS 41
>gb|BE363177.1|BE363177 DG1_9_H02.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 397
Score = 120 bits (257), Expect(2) = 3e-053
Identities = 44/50 (88%), Positives = 48/50 (96%)
Frame = +1 / +2
Query: 1 RLYASLWNADDWATQGGRVKADWSKAPFVASFRGFSADACVWDGGRQRCP 150
RLYASLWNADDWATQGGRVKADW++APFVASFRGFSADACVW G+Q+CP
Sbjct: 71 RLYASLWNADDWATQGGRVKADWTQAPFVASFRGFSADACVWANGKQQCP 220
Score = 110 bits (235), Expect(2) = 3e-053
Identities = 40/41 (97%), Positives = 40/41 (97%)
Frame = +1 / +2
Query: 202 WWNQQLSDMSYRRMRWVQRKFMIYNYCADAKRFPQGVPAEC 324
WWNQQLSDMSYRRMRWVQRKFMIYNYC DAKRFPQGVPAEC
Sbjct: 275 WWNQQLSDMSYRRMRWVQRKFMIYNYCTDAKRFPQGVPAEC 397
Score = 90.0 bits (190), Expect(2) = 2e-035
Identities = 37/41 (90%), Positives = 37/41 (90%)
Frame = -2 / -2
Query: 323 HSAGTPCGKRLASAQ*L*IMNLRCTQRMRR*LMSLSCWFHQ 201
HSAGTPCG RLAS Q*L*IMN CTQRMRR*LMSLSCWFHQ
Sbjct: 396 HSAGTPCGNRLASVQ*L*IMNFLCTQRMRR*LMSLSCWFHQ 274
Score = 81.7 bits (172), Expect(2) = 2e-035
Identities = 35/50 (70%), Positives = 38/50 (76%)
Frame = -2 / -2
Query: 152 SGQRCLPPSQTQASALKPRKEATKGALDQSALTRPPCVAQSSAFHRLAYS 3
+G C P + T ASAL PR +AT GA QSALTRPPCVAQSSAF RLAYS
Sbjct: 222 TGHCCFPFAHTHASALNPRNDATNGACVQSALTRPPCVAQSSAFQRLAYS 73
>gb|CD225604.1|CD225604 CCC1_40_G02.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_40_G02_A007 3', mRNA sequence
Length = 589
Score = 120 bits (256), Expect(3) = 2e-050
Identities = 45/46 (97%), Positives = 45/46 (97%)
Frame = +1 / +2
Query: 202 WWNQQLSDMSYRRMRWVQRKFMIYNYCADAKRFPQGVPAECKLR*G 339
WWNQQLSDMSYRRMRWVQRKFMIYNYC DAKRFPQGVPAECKLR*G
Sbjct: 185 WWNQQLSDMSYRRMRWVQRKFMIYNYCTDAKRFPQGVPAECKLR*G 322
Score = 102 bits (218), Expect(3) = 1e-035
Identities = 42/46 (91%), Positives = 42/46 (91%)
Frame = -2 / -2
Query: 338 PHRSLHSAGTPCGKRLASAQ*L*IMNLRCTQRMRR*LMSLSCWFHQ 201
PHRSLHSAGTPCG RLAS Q*L*IMN CTQRMRR*LMSLSCWFHQ
Sbjct: 321 PHRSLHSAGTPCGNRLASVQ*L*IMNFLCTQRMRR*LMSLSCWFHQ 184
Score = 99.6 bits (211), Expect(3) = 2e-050
Identities = 36/43 (83%), Positives = 40/43 (93%)
Frame = +1 / +2
Query: 22 NADDWATQGGRVKADWSKAPFVASFRGFSADACVWDGGRQRCP 150
NAD WATQGGRVKADW++APFVASFRGFSADACVW G+Q+CP
Sbjct: 2 NADXWATQGGRVKADWTQAPFVASFRGFSADACVWANGKQQCP 130
Score = 68.0 bits (142), Expect(3) = 1e-035
Identities = 29/44 (65%), Positives = 32/44 (72%)
Frame = -2 / -2
Query: 152 SGQRCLPPSQTQASALKPRKEATKGALDQSALTRPPCVAQSSAF 21
+G C P + T ASAL PR +AT GA QSALTRPPCVA SSAF
Sbjct: 132 TGHCCFPFAHTHASALNPRNDATNGACVQSALTRPPCVAXSSAF 1
Score = 24.4 bits (47), Expect(3) = 2e-050
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = +2 / +1
Query: 479 MVSCKCSSSRVAFFDLLF 532
+ CKCS+ FF L F
Sbjct: 472 LAQCKCSTHLALFFHLFF 525
Score = 23.5 bits (45), Expect(3) = 1e-035
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = -2 / -1
Query: 527 TNQRMRHD*SYIYMTP 480
TN+R+ D YIY+ P
Sbjct: 520 TNERIMRDACYIYIVP 473
>gb|BE359733.1|BE359733 DG1_56_H08.g2_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 427
Score = 120 bits (256), Expect(2) = 5e-050
Identities = 45/46 (97%), Positives = 45/46 (97%)
Frame = +1 / +1
Query: 202 WWNQQLSDMSYRRMRWVQRKFMIYNYCADAKRFPQGVPAECKLR*G 339
WWNQQLSDMSYRRMRWVQRKFMIYNYC DAKRFPQGVPAECKLR*G
Sbjct: 181 WWNQQLSDMSYRRMRWVQRKFMIYNYCTDAKRFPQGVPAECKLR*G 318
Score = 102 bits (218), Expect(2) = 1e-034
Identities = 42/46 (91%), Positives = 42/46 (91%)
Frame = -2 / -3
Query: 338 PHRSLHSAGTPCGKRLASAQ*L*IMNLRCTQRMRR*LMSLSCWFHQ 201
PHRSLHSAGTPCG RLAS Q*L*IMN CTQRMRR*LMSLSCWFHQ
Sbjct: 317 PHRSLHSAGTPCGNRLASVQ*L*IMNFLCTQRMRR*LMSLSCWFHQ 180
Score = 100 bits (212), Expect(2) = 5e-050
Identities = 36/42 (85%), Positives = 40/42 (95%)
Frame = +1 / +1
Query: 25 ADDWATQGGRVKADWSKAPFVASFRGFSADACVWDGGRQRCP 150
ADDWATQGGRVKADW++APFVASFRGFSADACVW G+Q+CP
Sbjct: 1 ADDWATQGGRVKADWTQAPFVASFRGFSADACVWANGKQQCP 126
Score = 66.1 bits (138), Expect(2) = 1e-034
Identities = 28/42 (66%), Positives = 31/42 (73%)
Frame = -2 / -3
Query: 152 SGQRCLPPSQTQASALKPRKEATKGALDQSALTRPPCVAQSS 27
+G C P + T ASAL PR +AT GA QSALTRPPCVAQSS
Sbjct: 128 TGHCCFPFAHTHASALNPRNDATNGACVQSALTRPPCVAQSS 3
>gb|CD227391.1|CD227391 CCC1_51_H09.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_51_H09_A007 3', mRNA sequence
Length = 571
Score = 120 bits (256), Expect(3) = 6e-047
Identities = 45/46 (97%), Positives = 45/46 (97%)
Frame = +1 / +3
Query: 202 WWNQQLSDMSYRRMRWVQRKFMIYNYCADAKRFPQGVPAECKLR*G 339
WWNQQLSDMSYRRMRWVQRKFMIYNYC DAKRFPQGVPAECKLR*G
Sbjct: 171 WWNQQLSDMSYRRMRWVQRKFMIYNYCTDAKRFPQGVPAECKLR*G 308
Score = 102 bits (218), Expect(3) = 2e-033
Identities = 42/46 (91%), Positives = 42/46 (91%)
Frame = -2 / -1
Query: 338 PHRSLHSAGTPCGKRLASAQ*L*IMNLRCTQRMRR*LMSLSCWFHQ 201
PHRSLHSAGTPCG RLAS Q*L*IMN CTQRMRR*LMSLSCWFHQ
Sbjct: 307 PHRSLHSAGTPCGNRLASVQ*L*IMNFLCTQRMRR*LMSLSCWFHQ 170
Score = 87.7 bits (185), Expect(3) = 6e-047
Identities = 32/38 (84%), Positives = 36/38 (94%)
Frame = +1 / +3
Query: 37 ATQGGRVKADWSKAPFVASFRGFSADACVWDGGRQRCP 150
ATQGGRVKADW++APFVASFRGFSADACVW G+Q+CP
Sbjct: 3 ATQGGRVKADWTQAPFVASFRGFSADACVWANGKQQCP 116
Score = 60.2 bits (125), Expect(3) = 2e-033
Identities = 25/39 (64%), Positives = 28/39 (71%)
Frame = -2 / -1
Query: 152 SGQRCLPPSQTQASALKPRKEATKGALDQSALTRPPCVA 36
+G C P + T ASAL PR +AT GA QSALTRPPCVA
Sbjct: 118 TGHCCFPFAHTHASALNPRNDATNGACVQSALTRPPCVA 2
Score = 24.4 bits (47), Expect(3) = 6e-047
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = +2 / +2
Query: 479 MVSCKCSSSRVAFFDLLF 532
+ CKCS+ FF L F
Sbjct: 458 LAQCKCSTHLALFFHLFF 511
Score = 23.5 bits (45), Expect(3) = 2e-033
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = -2 / -3
Query: 527 TNQRMRHD*SYIYMTP 480
TN+R+ D YIY+ P
Sbjct: 506 TNERIMRDACYIYIVP 459
>gb|BG103002.1|BG103002 RHIZ2_35_H06.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 561
Score = 120 bits (257), Expect(2) = 5e-046
Identities = 44/50 (88%), Positives = 48/50 (96%)
Frame = +1 / +1
Query: 1 RLYASLWNADDWATQGGRVKADWSKAPFVASFRGFSADACVWDGGRQRCP 150
RLYASLWNADDWATQGGRVKADW++APFVASFRGFSADACVW G+Q+CP
Sbjct: 262 RLYASLWNADDWATQGGRVKADWTQAPFVASFRGFSADACVWANGKQQCP 411
Score = 86.3 bits (182), Expect(2) = 5e-046
Identities = 31/32 (96%), Positives = 31/32 (96%)
Frame = +1 / +1
Query: 202 WWNQQLSDMSYRRMRWVQRKFMIYNYCADAKR 297
WWNQQLSDMSYRRMRWVQRKFMIYNYC DAKR
Sbjct: 466 WWNQQLSDMSYRRMRWVQRKFMIYNYCTDAKR 561
Score = 81.7 bits (172), Expect(2) = 8e-029
Identities = 35/50 (70%), Positives = 38/50 (76%)
Frame = -2 / -2
Query: 152 SGQRCLPPSQTQASALKPRKEATKGALDQSALTRPPCVAQSSAFHRLAYS 3
+G C P + T ASAL PR +AT GA QSALTRPPCVAQSSAF RLAYS
Sbjct: 413 TGHCCFPFAHTHASALNPRNDATNGACVQSALTRPPCVAQSSAFQRLAYS 264
Score = 67.5 bits (141), Expect(2) = 8e-029
Identities = 29/32 (90%), Positives = 29/32 (90%)
Frame = -2 / -2
Query: 296 RLASAQ*L*IMNLRCTQRMRR*LMSLSCWFHQ 201
RLAS Q*L*IMN CTQRMRR*LMSLSCWFHQ
Sbjct: 560 RLASVQ*L*IMNFLCTQRMRR*LMSLSCWFHQ 465
>gb|BE355170.1|BE355170 DG1_10_F05.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 383
Score = 120 bits (257), Expect(2) = 2e-044
Identities = 44/50 (88%), Positives = 48/50 (96%)
Frame = +1 / +1
Query: 1 RLYASLWNADDWATQGGRVKADWSKAPFVASFRGFSADACVWDGGRQRCP 150
RLYASLWNADDWATQGGRVKADW++APFVASFRGFSADACVW G+Q+CP
Sbjct: 73 RLYASLWNADDWATQGGRVKADWTQAPFVASFRGFSADACVWANGKQQCP 222
Score = 81.7 bits (172), Expect(2) = 5e-027
Identities = 35/50 (70%), Positives = 38/50 (76%)
Frame = -2 / -1
Query: 152 SGQRCLPPSQTQASALKPRKEATKGALDQSALTRPPCVAQSSAFHRLAYS 3
+G C P + T ASAL PR +AT GA QSALTRPPCVAQSSAF RLAYS
Sbjct: 224 TGHCCFPFAHTHASALNPRNDATNGACVQSALTRPPCVAQSSAFQRLAYS 75
Score = 80.8 bits (170), Expect(2) = 2e-044
Identities = 28/31 (90%), Positives = 30/31 (96%)
Frame = +1 / +1
Query: 202 WWNQQLSDMSYRRMRWVQRKFMIYNYCADAK 294
WWNQQLSDMSYRRMRWVQRKFMIYNYC D++
Sbjct: 277 WWNQQLSDMSYRRMRWVQRKFMIYNYCTDSQ 369
Score = 61.6 bits (128), Expect(2) = 5e-027
Identities = 26/29 (89%), Positives = 26/29 (89%)
Frame = -2 / -1
Query: 287 SAQ*L*IMNLRCTQRMRR*LMSLSCWFHQ 201
S Q*L*IMN CTQRMRR*LMSLSCWFHQ
Sbjct: 362 SVQ*L*IMNFLCTQRMRR*LMSLSCWFHQ 276
>gb|BG487912.1|BG487912 RHIZ2_60_H06.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 559
Score = 120 bits (256), Expect(3) = 4e-044
Identities = 45/46 (97%), Positives = 45/46 (97%)
Frame = +1 / +3
Query: 202 WWNQQLSDMSYRRMRWVQRKFMIYNYCADAKRFPQGVPAECKLR*G 339
WWNQQLSDMSYRRMRWVQRKFMIYNYC DAKRFPQGVPAECKLR*G
Sbjct: 159 WWNQQLSDMSYRRMRWVQRKFMIYNYCTDAKRFPQGVPAECKLR*G 296
Score = 102 bits (218), Expect(2) = 1e-029
Identities = 42/46 (91%), Positives = 42/46 (91%)
Frame = -2 / -1
Query: 338 PHRSLHSAGTPCGKRLASAQ*L*IMNLRCTQRMRR*LMSLSCWFHQ 201
PHRSLHSAGTPCG RLAS Q*L*IMN CTQRMRR*LMSLSCWFHQ
Sbjct: 295 PHRSLHSAGTPCGNRLASVQ*L*IMNFLCTQRMRR*LMSLSCWFHQ 158
Score = 78.5 bits (165), Expect(3) = 4e-044
Identities = 28/34 (82%), Positives = 32/34 (94%)
Frame = +1 / +3
Query: 49 GRVKADWSKAPFVASFRGFSADACVWDGGRQRCP 150
GRVKADW++APFVASFRGFSADACVW G+Q+CP
Sbjct: 3 GRVKADWTQAPFVASFRGFSADACVWANGKQQCP 104
Score = 49.2 bits (101), Expect(2) = 1e-029
Identities = 21/35 (60%), Positives = 24/35 (68%)
Frame = -2 / -1
Query: 152 SGQRCLPPSQTQASALKPRKEATKGALDQSALTRP 48
+G C P + T ASAL PR +AT GA QSALTRP
Sbjct: 106 TGHCCFPFAHTHASALNPRNDATNGACVQSALTRP 2
Score = 24.0 bits (46), Expect(3) = 4e-044
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = +2 / +2
Query: 479 MVSCKCSSSRVAFFDLLF 532
+ CKCS+ FF L F
Sbjct: 452 LAQCKCSTHVALFFHLFF 505
>gb|CW038952.1|CW038952 104_271_10505213_114_30387 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10505213, DNA
sequence
Length = 612
Score = 120 bits (256), Expect(3) = 2e-039
Identities = 45/46 (97%), Positives = 45/46 (97%)
Frame = +1 / -3
Query: 202 WWNQQLSDMSYRRMRWVQRKFMIYNYCADAKRFPQGVPAECKLR*G 339
WWNQQLSDMSYRRMRWVQRKFMIYNYC DAKRFPQGVPAECKLR*G
Sbjct: 472 WWNQQLSDMSYRRMRWVQRKFMIYNYCTDAKRFPQGVPAECKLR*G 335
Score = 102 bits (218), Expect(3) = 1e-025
Identities = 42/46 (91%), Positives = 42/46 (91%)
Frame = -2 / +3
Query: 338 PHRSLHSAGTPCGKRLASAQ*L*IMNLRCTQRMRR*LMSLSCWFHQ 201
PHRSLHSAGTPCG RLAS Q*L*IMN CTQRMRR*LMSLSCWFHQ
Sbjct: 336 PHRSLHSAGTPCGNRLASVQ*L*IMNFLCTQRMRR*LMSLSCWFHQ 473
Score = 62.5 bits (130), Expect(3) = 2e-039
Identities = 21/28 (75%), Positives = 25/28 (89%)
Frame = +1 / -3
Query: 67 WSKAPFVASFRGFSADACVWDGGRQRCP 150
W++ PFVASFRGFSADACVW G+Q+CP
Sbjct: 610 WTQPPFVASFRGFSADACVWANGKQQCP 527
Score = 34.1 bits (68), Expect(3) = 1e-025
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = -2 / +3
Query: 152 SGQRCLPPSQTQASALKPRKEATKGALDQ 66
+G C P + T ASAL PR +AT G Q
Sbjct: 525 TGHCCFPFAHTHASALNPRNDATNGGCVQ 611
Score = 24.4 bits (47), Expect(3) = 2e-039
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = +2 / -2
Query: 479 MVSCKCSSSRVAFFDLLF 532
+ CKCS+ FF L F
Sbjct: 185 LAQCKCSTHLALFFHLFF 132
Score = 23.5 bits (45), Expect(3) = 1e-025
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = -2 / +2
Query: 527 TNQRMRHD*SYIYMTP 480
TN+R+ D YIY+ P
Sbjct: 137 TNERIMRDACYIYIVP 184
>gb|CL157536.1|CL157536 104_345_10783651_114_31477_211 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10783651, DNA
sequence
Length = 783
Score = 93.6 bits (198), Expect(2) = 5e-037
Identities = 35/41 (85%), Positives = 37/41 (90%)
Frame = +1 / -2
Query: 1 RLYASLWNADDWATQGGRVKADWSKAPFVASFRGFSADACV 123
RLY+SLWNADDWATQGGRVK DWS APF AS+RGF ADACV
Sbjct: 671 RLYSSLWNADDWATQGGRVKTDWSHAPFSASYRGFRADACV 549
Score = 83.1 bits (175), Expect(2) = 5e-037
Identities = 29/45 (64%), Positives = 37/45 (82%)
Frame = +1 / -2
Query: 202 WWNQQLSDMSYRRMRWVQRKFMIYNYCADAKRFPQGVPAECKLR* 336
W+NQ+L +RMRWVQRK+MIYNYC D KR+PQG+PAEC ++*
Sbjct: 455 WYNQELDLTLQQRMRWVQRKYMIYNYCTDPKRYPQGLPAECSMQ* 321
Score = 77.6 bits (163), Expect(2) = 6e-024
Identities = 33/41 (80%), Positives = 34/41 (82%)
Frame = -2 / +1
Query: 134 PPSQTQASALKPRKEATKGALDQSALTRPPCVAQSSAFHRL 12
P + TQASAL PR EA KGA DQS LTRPPCVAQSSAFHRL
Sbjct: 538 PATATQASALNPRYEAEKGAWDQSVLTRPPCVAQSSAFHRL 660
Score = 55.1 bits (114), Expect(2) = 6e-024
Identities = 25/41 (60%), Positives = 28/41 (68%)
Frame = -2 / +1
Query: 323 HSAGTPCGKRLASAQ*L*IMNLRCTQRMRR*LMSLSCWFHQ 201
HSAG PCG RL S Q*L*IM LRCT R+R + S W +Q
Sbjct: 334 HSAGRPCG*RLGSVQ*L*IMYLRCTHRIRCCSVRSSSWLYQ 456
>gb|CN139453.1|CN139453 OX1_22_E01.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_22_E01_A002 3', mRNA sequence
Length = 731
Score = 93.6 bits (198), Expect(2) = 5e-037
Identities = 35/41 (85%), Positives = 37/41 (90%)
Frame = +1 / +3
Query: 1 RLYASLWNADDWATQGGRVKADWSKAPFVASFRGFSADACV 123
RLY+SLWNADDWATQGGRVK DWS APF AS+RGF ADACV
Sbjct: 66 RLYSSLWNADDWATQGGRVKTDWSHAPFSASYRGFRADACV 188
Score = 83.1 bits (175), Expect(2) = 5e-037
Identities = 29/45 (64%), Positives = 37/45 (82%)
Frame = +1 / +3
Query: 202 WWNQQLSDMSYRRMRWVQRKFMIYNYCADAKRFPQGVPAECKLR* 336
W+NQ+L +RMRWVQRK+MIYNYC D KR+PQG+PAEC ++*
Sbjct: 282 WYNQELDLTLQQRMRWVQRKYMIYNYCTDPKRYPQGLPAECSMQ* 416
Score = 77.6 bits (163), Expect(2) = 6e-024
Identities = 33/41 (80%), Positives = 34/41 (82%)
Frame = -2 / -2
Query: 134 PPSQTQASALKPRKEATKGALDQSALTRPPCVAQSSAFHRL 12
P + TQASAL PR EA KGA DQS LTRPPCVAQSSAFHRL
Sbjct: 199 PATATQASALNPRYEAEKGAWDQSVLTRPPCVAQSSAFHRL 77
Score = 55.1 bits (114), Expect(2) = 6e-024
Identities = 25/41 (60%), Positives = 28/41 (68%)
Frame = -2 / -2
Query: 323 HSAGTPCGKRLASAQ*L*IMNLRCTQRMRR*LMSLSCWFHQ 201
HSAG PCG RL S Q*L*IM LRCT R+R + S W +Q
Sbjct: 403 HSAGRPCG*RLGSVQ*L*IMYLRCTHRIRCCSVRSSSWLYQ 281
>gb|AW672235.1|AW672235 LG1_358_E01.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 549
Score = 93.6 bits (198), Expect(2) = 5e-037
Identities = 35/41 (85%), Positives = 37/41 (90%)
Frame = +1 / +2
Query: 1 RLYASLWNADDWATQGGRVKADWSKAPFVASFRGFSADACV 123
RLY+SLWNADDWATQGGRVK DWS APF AS+RGF ADACV
Sbjct: 56 RLYSSLWNADDWATQGGRVKTDWSHAPFSASYRGFRADACV 178
Score = 83.1 bits (175), Expect(2) = 5e-037
Identities = 29/45 (64%), Positives = 37/45 (82%)
Frame = +1 / +2
Query: 202 WWNQQLSDMSYRRMRWVQRKFMIYNYCADAKRFPQGVPAECKLR* 336
W+NQ+L +RMRWVQRK+MIYNYC D KR+PQG+PAEC ++*
Sbjct: 272 WYNQELDLTLQQRMRWVQRKYMIYNYCTDPKRYPQGLPAECSMQ* 406
Score = 77.6 bits (163), Expect(2) = 6e-024
Identities = 33/41 (80%), Positives = 34/41 (82%)
Frame = -2 / -1
Query: 134 PPSQTQASALKPRKEATKGALDQSALTRPPCVAQSSAFHRL 12
P + TQASAL PR EA KGA DQS LTRPPCVAQSSAFHRL
Sbjct: 189 PATATQASALNPRYEAEKGAWDQSVLTRPPCVAQSSAFHRL 67
Score = 55.1 bits (114), Expect(2) = 6e-024
Identities = 25/41 (60%), Positives = 28/41 (68%)
Frame = -2 / -1
Query: 323 HSAGTPCGKRLASAQ*L*IMNLRCTQRMRR*LMSLSCWFHQ 201
HSAG PCG RL S Q*L*IM LRCT R+R + S W +Q
Sbjct: 393 HSAGRPCG*RLGSVQ*L*IMYLRCTHRIRCCSVRSSSWLYQ 271
>gb|AW923615.1|AW923615 DG1_56_H08.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 456
Score = 120 bits (256), Expect(3) = 4e-035
Identities = 45/46 (97%), Positives = 45/46 (97%)
Frame = +1 / +3
Query: 202 WWNQQLSDMSYRRMRWVQRKFMIYNYCADAKRFPQGVPAECKLR*G 339
WWNQQLSDMSYRRMRWVQRKFMIYNYC DAKRFPQGVPAECKLR*G
Sbjct: 117 WWNQQLSDMSYRRMRWVQRKFMIYNYCTDAKRFPQGVPAECKLR*G 254
Score = 102 bits (218), Expect(3) = 9e-024
Identities = 42/46 (91%), Positives = 42/46 (91%)
Frame = -2 / -3
Query: 338 PHRSLHSAGTPCGKRLASAQ*L*IMNLRCTQRMRR*LMSLSCWFHQ 201
PHRSLHSAGTPCG RLAS Q*L*IMN CTQRMRR*LMSLSCWFHQ
Sbjct: 253 PHRSLHSAGTPCGNRLASVQ*L*IMNFLCTQRMRR*LMSLSCWFHQ 116
Score = 47.3 bits (97), Expect(3) = 4e-035
Identities = 16/20 (80%), Positives = 18/20 (90%)
Frame = +1 / +3
Query: 91 SFRGFSADACVWDGGRQRCP 150
SFRGFSADACVW G+Q+CP
Sbjct: 3 SFRGFSADACVWANGKQQCP 62
Score = 26.7 bits (52), Expect(3) = 9e-024
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = -2 / -3
Query: 152 SGQRCLPPSQTQASALKPRKE 90
+G C P + T ASAL PR +
Sbjct: 64 TGHCCFPFAHTHASALNPRND 2
Score = 24.0 bits (46), Expect(3) = 4e-035
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +3 / +3
Query: 474 KEWCHVNVALVVSHSLIC 527
+ W +VNVA + +S IC
Sbjct: 399 RRWHNVNVARISHYSFIC 452
Score = 23.5 bits (45), Expect(3) = 9e-024
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = -2 / -2
Query: 527 TNQRMRHD*SYIYMTP 480
TN+R+ D YIY+ P
Sbjct: 452 TNERIMRDACYIYIVP 405
>gb|CF427555.1|CF427555 PH1_16_E07.b1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_16_E07_A002 3', mRNA sequence
Length = 517
Score = 120 bits (256), Expect(3) = 9e-034
Identities = 45/46 (97%), Positives = 45/46 (97%)
Frame = +1 / +3
Query: 202 WWNQQLSDMSYRRMRWVQRKFMIYNYCADAKRFPQGVPAECKLR*G 339
WWNQQLSDMSYRRMRWVQRKFMIYNYC DAKRFPQGVPAECKLR*G
Sbjct: 111 WWNQQLSDMSYRRMRWVQRKFMIYNYCTDAKRFPQGVPAECKLR*G 248
Score = 102 bits (218), Expect(3) = 2e-023
Identities = 42/46 (91%), Positives = 42/46 (91%)
Frame = -2 / -1
Query: 338 PHRSLHSAGTPCGKRLASAQ*L*IMNLRCTQRMRR*LMSLSCWFHQ 201
PHRSLHSAGTPCG RLAS Q*L*IMN CTQRMRR*LMSLSCWFHQ
Sbjct: 247 PHRSLHSAGTPCGNRLASVQ*L*IMNFLCTQRMRR*LMSLSCWFHQ 110
Score = 42.8 bits (87), Expect(3) = 9e-034
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = +1 / +3
Query: 97 RGFSADACVWDGGRQRCP 150
RGFSADACVW G+Q+CP
Sbjct: 3 RGFSADACVWANGKQQCP 56
Score = 25.8 bits (50), Expect(3) = 2e-023
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -2 / -1
Query: 152 SGQRCLPPSQTQASALKPR 96
+G C P + T ASAL PR
Sbjct: 58 TGHCCFPFAHTHASALNPR 2
Score = 24.4 bits (47), Expect(3) = 9e-034
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = +2 / +2
Query: 479 MVSCKCSSSRVAFFDLLF 532
+ CKCS+ FF L F
Sbjct: 398 LAQCKCSTHLALFFHLFF 451
Score = 23.5 bits (45), Expect(3) = 2e-023
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = -2 / -3
Query: 527 TNQRMRHD*SYIYMTP 480
TN+R+ D YIY+ P
Sbjct: 446 TNERIMRDACYIYIVP 399
>gb|CW118138.1|CW118138 104_494_11108040_148_34621_088 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11108040, DNA
sequence
Length = 442
Score = 83.1 bits (175), Expect(2) = 4e-029
Identities = 29/45 (64%), Positives = 37/45 (82%)
Frame = +1 / -3
Query: 202 WWNQQLSDMSYRRMRWVQRKFMIYNYCADAKRFPQGVPAECKLR* 336
W+NQ+L +RMRWVQRK+MIYNYC D KR+PQG+PAEC ++*
Sbjct: 257 WYNQELDLTLQQRMRWVQRKYMIYNYCTDPKRYPQGLPAECSMQ* 123
Score = 67.0 bits (140), Expect(2) = 4e-029
Identities = 25/30 (83%), Positives = 26/30 (86%)
Frame = +1 / -3
Query: 34 WATQGGRVKADWSKAPFVASFRGFSADACV 123
WATQGGRVK DWS APF AS+RGF ADACV
Sbjct: 440 WATQGGRVKTDWSHAPFSASYRGFRADACV 351
>gb|CL177480.1|CL177480 104_384_10893857_148_31915_305 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10893857, DNA
sequence
Length = 716
Score = 79.9 bits (168), Expect(2) = 3e-027
Identities = 29/39 (74%), Positives = 34/39 (87%)
Frame = +1 / -1
Query: 1 RLYASLWNADDWATQGGRVKADWSKAPFVASFRGFSADA 117
RLY SLW+A+DWATQGGRVK DWS+APFVA +R F+A A
Sbjct: 419 RLYGSLWDAEDWATQGGRVKTDWSQAPFVAQYRSFTATA 303
Score = 63.8 bits (133), Expect(2) = 3e-027
Identities = 20/42 (47%), Positives = 30/42 (71%)
Frame = +1 / -1
Query: 205 WNQQLSDMSYRRMRWVQRKFMIYNYCADAKRFPQGVPAECKL 330
+ QQ+ + + M+W + +M+Y+YCAD KRFPQGVP EC +
Sbjct: 272 YGQQMDAAAQQSMKWARDNYMVYDYCADTKRFPQGVPPECSM 147
>gb|BE593178.1|BE593178 WS1_98_E03.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 373
Score = 120 bits (256), Expect(2) = 7e-027
Identities = 45/46 (97%), Positives = 45/46 (97%)
Frame = +1 / +1
Query: 202 WWNQQLSDMSYRRMRWVQRKFMIYNYCADAKRFPQGVPAECKLR*G 339
WWNQQLSDMSYRRMRWVQRKFMIYNYC DAKRFPQGVPAECKLR*G
Sbjct: 31 WWNQQLSDMSYRRMRWVQRKFMIYNYCTDAKRFPQGVPAECKLR*G 168
Score = 102 bits (218), Expect(2) = 2e-021
Identities = 42/46 (91%), Positives = 42/46 (91%)
Frame = -2 / -3
Query: 338 PHRSLHSAGTPCGKRLASAQ*L*IMNLRCTQRMRR*LMSLSCWFHQ 201
PHRSLHSAGTPCG RLAS Q*L*IMN CTQRMRR*LMSLSCWFHQ
Sbjct: 167 PHRSLHSAGTPCGNRLASVQ*L*IMNFLCTQRMRR*LMSLSCWFHQ 30
Score = 24.4 bits (47), Expect(2) = 7e-027
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = +2 / +3
Query: 479 MVSCKCSSSRVAFFDLLF 532
+ CKCS+ FF L F
Sbjct: 318 LAQCKCSTHLALFFHLFF 371
Score = 23.5 bits (45), Expect(2) = 2e-021
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = -2 / -2
Query: 527 TNQRMRHD*SYIYMTP 480
TN+R+ D YIY+ P
Sbjct: 366 TNERIMRDACYIYIVP 319
>gb|BG050374.1|BG050374 FM1_53_C07.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 279
Score = 120 bits (256), Expect = 5e-026
Identities = 45/46 (97%), Positives = 45/46 (97%)
Frame = +1 / +3
Query: 202 WWNQQLSDMSYRRMRWVQRKFMIYNYCADAKRFPQGVPAECKLR*G 339
WWNQQLSDMSYRRMRWVQRKFMIYNYC DAKRFPQGVPAECKLR*G
Sbjct: 27 WWNQQLSDMSYRRMRWVQRKFMIYNYCTDAKRFPQGVPAECKLR*G 164
Score = 102 bits (218), Expect = 9e-021
Identities = 42/46 (91%), Positives = 42/46 (91%)
Frame = -2 / -3
Query: 338 PHRSLHSAGTPCGKRLASAQ*L*IMNLRCTQRMRR*LMSLSCWFHQ 201
PHRSLHSAGTPCG RLAS Q*L*IMN CTQRMRR*LMSLSCWFHQ
Sbjct: 163 PHRSLHSAGTPCGNRLASVQ*L*IMNFLCTQRMRR*LMSLSCWFHQ 26
>gb|BG558117.1|BG558117 RHIZ2_67_A09.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 247
Score = 120 bits (256), Expect = 5e-026
Identities = 45/46 (97%), Positives = 45/46 (97%)
Frame = +1 / +3
Query: 202 WWNQQLSDMSYRRMRWVQRKFMIYNYCADAKRFPQGVPAECKLR*G 339
WWNQQLSDMSYRRMRWVQRKFMIYNYC DAKRFPQGVPAECKLR*G
Sbjct: 45 WWNQQLSDMSYRRMRWVQRKFMIYNYCTDAKRFPQGVPAECKLR*G 182
Score = 102 bits (218), Expect = 9e-021
Identities = 42/46 (91%), Positives = 42/46 (91%)
Frame = -2 / -1
Query: 338 PHRSLHSAGTPCGKRLASAQ*L*IMNLRCTQRMRR*LMSLSCWFHQ 201
PHRSLHSAGTPCG RLAS Q*L*IMN CTQRMRR*LMSLSCWFHQ
Sbjct: 181 PHRSLHSAGTPCGNRLASVQ*L*IMNFLCTQRMRR*LMSLSCWFHQ 44
>gb|CW218469.1|CW218469 104_652_11196207_116_37528_062 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11196207, DNA
sequence
Length = 718
Score = 82.2 bits (173), Expect(2) = 6e-026
Identities = 28/40 (70%), Positives = 37/40 (92%)
Frame = +1 / +1
Query: 1 RLYASLWNADDWATQGGRVKADWSKAPFVASFRGFSADAC 120
R+YAS+W+A++WATQGGRVK DWSKAPFVAS++G++A C
Sbjct: 103 RVYASVWDAEEWATQGGRVKTDWSKAPFVASYQGYAAAGC 222
Score = 57.4 bits (119), Expect(2) = 6e-026
Identities = 20/41 (48%), Positives = 26/41 (63%)
Frame = +1 / +1
Query: 202 WWNQQLSDMSYRRMRWVQRKFMIYNYCADAKRFPQGVPAEC 324
W +Q+L + ++R Q +MIYNYC D RFPQG P EC
Sbjct: 265 WMSQELDSAAQGQLRRAQASYMIYNYCTDKYRFPQGPPPEC 387
>gb|CN146426.1|CN146426 WOUND1_41_D07.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_41_D07_A002 3', mRNA sequence
Length = 707
Score = 82.2 bits (173), Expect(2) = 6e-026
Identities = 28/40 (70%), Positives = 37/40 (92%)
Frame = +1 / +1
Query: 1 RLYASLWNADDWATQGGRVKADWSKAPFVASFRGFSADAC 120
R+YAS+W+A++WATQGGRVK DWSKAPFVAS++G++A C
Sbjct: 205 RVYASVWDAEEWATQGGRVKTDWSKAPFVASYQGYAAAGC 324
Score = 57.4 bits (119), Expect(2) = 6e-026
Identities = 20/41 (48%), Positives = 26/41 (63%)
Frame = +1 / +1
Query: 202 WWNQQLSDMSYRRMRWVQRKFMIYNYCADAKRFPQGVPAEC 324
W +Q+L + ++R Q +MIYNYC D RFPQG P EC
Sbjct: 367 WMSQELDSAAQGQLRRAQASYMIYNYCTDKYRFPQGPPPEC 489
>gb|BG605826.1|BG605826 RHIZ2_81_H11.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 700
Score = 82.2 bits (173), Expect(2) = 6e-026
Identities = 28/40 (70%), Positives = 37/40 (92%)
Frame = +1 / +1
Query: 1 RLYASLWNADDWATQGGRVKADWSKAPFVASFRGFSADAC 120
R+YAS+W+A++WATQGGRVK DWSKAPFVAS++G++A C
Sbjct: 235 RVYASVWDAEEWATQGGRVKTDWSKAPFVASYQGYAAAGC 354
Score = 57.4 bits (119), Expect(2) = 6e-026
Identities = 20/41 (48%), Positives = 26/41 (63%)
Frame = +1 / +1
Query: 202 WWNQQLSDMSYRRMRWVQRKFMIYNYCADAKRFPQGVPAEC 324
W +Q+L + ++R Q +MIYNYC D RFPQG P EC
Sbjct: 397 WMSQELDSAAQGQLRRAQASYMIYNYCTDKYRFPQGPPPEC 519
>gb|CX618502.1|CX618502 GABR1_40_B04.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_40_B04_A002 3', mRNA sequence
Length = 687
Score = 82.2 bits (173), Expect(2) = 6e-026
Identities = 28/40 (70%), Positives = 37/40 (92%)
Frame = +1 / +3
Query: 1 RLYASLWNADDWATQGGRVKADWSKAPFVASFRGFSADAC 120
R+YAS+W+A++WATQGGRVK DWSKAPFVAS++G++A C
Sbjct: 207 RVYASVWDAEEWATQGGRVKTDWSKAPFVASYQGYAAAGC 326
Score = 57.4 bits (119), Expect(2) = 6e-026
Identities = 20/41 (48%), Positives = 26/41 (63%)
Frame = +1 / +3
Query: 202 WWNQQLSDMSYRRMRWVQRKFMIYNYCADAKRFPQGVPAEC 324
W +Q+L + ++R Q +MIYNYC D RFPQG P EC
Sbjct: 369 WMSQELDSAAQGQLRRAQASYMIYNYCTDKYRFPQGPPPEC 491
>gb|CW111253.1|CW111253 104_484_11104205_148_34527_023 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11104205, DNA
sequence
Length = 660
Score = 82.2 bits (173), Expect(2) = 6e-026
Identities = 28/40 (70%), Positives = 37/40 (92%)
Frame = +1 / -2
Query: 1 RLYASLWNADDWATQGGRVKADWSKAPFVASFRGFSADAC 120
R+YAS+W+A++WATQGGRVK DWSKAPFVAS++G++A C
Sbjct: 293 RVYASVWDAEEWATQGGRVKTDWSKAPFVASYQGYAAAGC 174
Score = 57.4 bits (119), Expect(2) = 6e-026
Identities = 20/41 (48%), Positives = 26/41 (63%)
Frame = +1 / -2
Query: 202 WWNQQLSDMSYRRMRWVQRKFMIYNYCADAKRFPQGVPAEC 324
W +Q+L + ++R Q +MIYNYC D RFPQG P EC
Sbjct: 131 WMSQELDSAAQGQLRRAQASYMIYNYCTDKYRFPQGPPPEC 9
>gb|BE356755.1|BE356755 DG1_12_C08.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 610
Score = 82.2 bits (173), Expect(2) = 6e-026
Identities = 28/40 (70%), Positives = 37/40 (92%)
Frame = +1 / +2
Query: 1 RLYASLWNADDWATQGGRVKADWSKAPFVASFRGFSADAC 120
R+YAS+W+A++WATQGGRVK DWSKAPFVAS++G++A C
Sbjct: 158 RVYASVWDAEEWATQGGRVKTDWSKAPFVASYQGYAAAGC 277
Score = 57.4 bits (119), Expect(2) = 6e-026
Identities = 20/41 (48%), Positives = 26/41 (63%)
Frame = +1 / +2
Query: 202 WWNQQLSDMSYRRMRWVQRKFMIYNYCADAKRFPQGVPAEC 324
W +Q+L + ++R Q +MIYNYC D RFPQG P EC
Sbjct: 320 WMSQELDSAAQGQLRRAQASYMIYNYCTDKYRFPQGPPPEC 442
>gb|CW368566.1|CW368566 fsbb001f042j11k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f042j11, DNA
sequence
Length = 594
Score = 82.2 bits (173), Expect(2) = 6e-026
Identities = 28/40 (70%), Positives = 37/40 (92%)
Frame = +1 / -2
Query: 1 RLYASLWNADDWATQGGRVKADWSKAPFVASFRGFSADAC 120
R+YAS+W+A++WATQGGRVK DWSKAPFVAS++G++A C
Sbjct: 389 RVYASVWDAEEWATQGGRVKTDWSKAPFVASYQGYAAAGC 270
Score = 57.4 bits (119), Expect(2) = 6e-026
Identities = 20/41 (48%), Positives = 26/41 (63%)
Frame = +1 / -3
Query: 202 WWNQQLSDMSYRRMRWVQRKFMIYNYCADAKRFPQGVPAEC 324
W +Q+L + ++R Q +MIYNYC D RFPQG P EC
Sbjct: 226 WMSQELDSAAQGQLRRAQASYMIYNYCTDKYRFPQGPPPEC 104
>gb|AW285132.1|AW285132 LG1_206_E11.g1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 574
Score = 82.2 bits (173), Expect(2) = 6e-026
Identities = 28/40 (70%), Positives = 37/40 (92%)
Frame = +1 / +3
Query: 1 RLYASLWNADDWATQGGRVKADWSKAPFVASFRGFSADAC 120
R+YAS+W+A++WATQGGRVK DWSKAPFVAS++G++A C
Sbjct: 87 RVYASVWDAEEWATQGGRVKTDWSKAPFVASYQGYAAAGC 206
Score = 57.4 bits (119), Expect(2) = 6e-026
Identities = 20/41 (48%), Positives = 26/41 (63%)
Frame = +1 / +3
Query: 202 WWNQQLSDMSYRRMRWVQRKFMIYNYCADAKRFPQGVPAEC 324
W +Q+L + ++R Q +MIYNYC D RFPQG P EC
Sbjct: 249 WMSQELDSAAQGQLRRAQASYMIYNYCTDKYRFPQGPPPEC 371
>gb|CD235852.1|CD235852 SS1_24_D08.b1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_24_D08_A012 3', mRNA sequence
Length = 567
Score = 82.2 bits (173), Expect(2) = 6e-026
Identities = 28/40 (70%), Positives = 37/40 (92%)
Frame = +1 / +3
Query: 1 RLYASLWNADDWATQGGRVKADWSKAPFVASFRGFSADAC 120
R+YAS+W+A++WATQGGRVK DWSKAPFVAS++G++A C
Sbjct: 66 RVYASVWDAEEWATQGGRVKTDWSKAPFVASYQGYAAAGC 185
Score = 57.4 bits (119), Expect(2) = 6e-026
Identities = 20/41 (48%), Positives = 26/41 (63%)
Frame = +1 / +3
Query: 202 WWNQQLSDMSYRRMRWVQRKFMIYNYCADAKRFPQGVPAEC 324
W +Q+L + ++R Q +MIYNYC D RFPQG P EC
Sbjct: 228 WMSQELDSAAQGQLRRAQASYMIYNYCTDKYRFPQGPPPEC 350
>gb|AW282975.1|AW282975 LG1_206_D03.g1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 560
Score = 82.2 bits (173), Expect(2) = 6e-026
Identities = 28/40 (70%), Positives = 37/40 (92%)
Frame = +1 / +1
Query: 1 RLYASLWNADDWATQGGRVKADWSKAPFVASFRGFSADAC 120
R+YAS+W+A++WATQGGRVK DWSKAPFVAS++G++A C
Sbjct: 73 RVYASVWDAEEWATQGGRVKTDWSKAPFVASYQGYAAAGC 192
Score = 57.4 bits (119), Expect(2) = 6e-026
Identities = 20/41 (48%), Positives = 26/41 (63%)
Frame = +1 / +1
Query: 202 WWNQQLSDMSYRRMRWVQRKFMIYNYCADAKRFPQGVPAEC 324
W +Q+L + ++R Q +MIYNYC D RFPQG P EC
Sbjct: 235 WMSQELDSAAQGQLRRAQASYMIYNYCTDKYRFPQGPPPEC 357
>gb|CD236573.1|CD236573 SS1_35_F07.b1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_35_F07_A012 3', mRNA sequence
Length = 551
Score = 82.2 bits (173), Expect(2) = 6e-026
Identities = 28/40 (70%), Positives = 37/40 (92%)
Frame = +1 / +3
Query: 1 RLYASLWNADDWATQGGRVKADWSKAPFVASFRGFSADAC 120
R+YAS+W+A++WATQGGRVK DWSKAPFVAS++G++A C
Sbjct: 66 RVYASVWDAEEWATQGGRVKTDWSKAPFVASYQGYAAAGC 185
Score = 57.4 bits (119), Expect(2) = 6e-026
Identities = 20/41 (48%), Positives = 26/41 (63%)
Frame = +1 / +3
Query: 202 WWNQQLSDMSYRRMRWVQRKFMIYNYCADAKRFPQGVPAEC 324
W +Q+L + ++R Q +MIYNYC D RFPQG P EC
Sbjct: 228 WMSQELDSAAQGQLRRAQASYMIYNYCTDKYRFPQGPPPEC 350
>gb|AW676674.1|AW676674 DG1_13_H08.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 503
Score = 82.2 bits (173), Expect(2) = 6e-026
Identities = 28/40 (70%), Positives = 37/40 (92%)
Frame = +1 / +3
Query: 1 RLYASLWNADDWATQGGRVKADWSKAPFVASFRGFSADAC 120
R+YAS+W+A++WATQGGRVK DWSKAPFVAS++G++A C
Sbjct: 15 RVYASVWDAEEWATQGGRVKTDWSKAPFVASYQGYAAAGC 134
Score = 57.4 bits (119), Expect(2) = 6e-026
Identities = 20/41 (48%), Positives = 26/41 (63%)
Frame = +1 / +3
Query: 202 WWNQQLSDMSYRRMRWVQRKFMIYNYCADAKRFPQGVPAEC 324
W +Q+L + ++R Q +MIYNYC D RFPQG P EC
Sbjct: 177 WMSQELDSAAQGQLRRAQASYMIYNYCTDKYRFPQGPPPEC 299
>gb|BE352863.1|BE352863 LG1_267_G09.g1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 479
Score = 82.2 bits (173), Expect(2) = 6e-026
Identities = 28/40 (70%), Positives = 37/40 (92%)
Frame = +1 / -1
Query: 1 RLYASLWNADDWATQGGRVKADWSKAPFVASFRGFSADAC 120
R+YAS+W+A++WATQGGRVK DWSKAPFVAS++G++A C
Sbjct: 428 RVYASVWDAEEWATQGGRVKTDWSKAPFVASYQGYAAAGC 309
Score = 57.4 bits (119), Expect(2) = 6e-026
Identities = 20/41 (48%), Positives = 26/41 (63%)
Frame = +1 / -1
Query: 202 WWNQQLSDMSYRRMRWVQRKFMIYNYCADAKRFPQGVPAEC 324
W +Q+L + ++R Q +MIYNYC D RFPQG P EC
Sbjct: 266 WMSQELDSAAQGQLRRAQASYMIYNYCTDKYRFPQGPPPEC 144
>gb|BE352864.1|BE352864 LG1_267_G10.g1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 476
Score = 82.2 bits (173), Expect(2) = 6e-026
Identities = 28/40 (70%), Positives = 37/40 (92%)
Frame = +1 / -2
Query: 1 RLYASLWNADDWATQGGRVKADWSKAPFVASFRGFSADAC 120
R+YAS+W+A++WATQGGRVK DWSKAPFVAS++G++A C
Sbjct: 430 RVYASVWDAEEWATQGGRVKTDWSKAPFVASYQGYAAAGC 311
Score = 57.4 bits (119), Expect(2) = 6e-026
Identities = 20/41 (48%), Positives = 26/41 (63%)
Frame = +1 / -2
Query: 202 WWNQQLSDMSYRRMRWVQRKFMIYNYCADAKRFPQGVPAEC 324
W +Q+L + ++R Q +MIYNYC D RFPQG P EC
Sbjct: 268 WMSQELDSAAQGQLRRAQASYMIYNYCTDKYRFPQGPPPEC 146
>gb|CW323273.1|CW323273 104_817_11476543_148_35960_026 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11476543, DNA
sequence
Length = 734
Score = 83.5 bits (176), Expect(2) = 2e-025
Identities = 29/41 (70%), Positives = 36/41 (87%)
Frame = +1 / +2
Query: 1 RLYASLWNADDWATQGGRVKADWSKAPFVASFRGFSADACV 123
RLYAS+W+AD+WATQGGR+K DWS APF A FR ++A+ACV
Sbjct: 338 RLYASIWDADEWATQGGRIKTDWSHAPFTAFFRNYTANACV 460
Score = 54.7 bits (113), Expect(2) = 2e-025
Identities = 18/41 (43%), Positives = 27/41 (65%)
Frame = +1 / +2
Query: 202 WWNQQLSDMSYRRMRWVQRKFMIYNYCADAKRFPQGVPAEC 324
W+NQ+L + +++ V K IY+YC D++RFP G P EC
Sbjct: 509 WFNQELDEEGQQKLNDVNAKNKIYDYCTDSRRFPNGYPPEC 631
>gb|CW275098.1|CW275098 104_748_11404780_148_35385_012 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11404780, DNA
sequence
Length = 687
Score = 83.5 bits (176), Expect(2) = 2e-025
Identities = 29/41 (70%), Positives = 36/41 (87%)
Frame = +1 / +3
Query: 1 RLYASLWNADDWATQGGRVKADWSKAPFVASFRGFSADACV 123
RLYAS+W+AD+WATQGGR+K DWS APF A FR ++A+ACV
Sbjct: 342 RLYASIWDADEWATQGGRIKTDWSHAPFTAFFRNYTANACV 464
Score = 54.7 bits (113), Expect(2) = 2e-025
Identities = 18/41 (43%), Positives = 27/41 (65%)
Frame = +1 / +3
Query: 202 WWNQQLSDMSYRRMRWVQRKFMIYNYCADAKRFPQGVPAEC 324
W+NQ+L + +++ V K IY+YC D++RFP G P EC
Sbjct: 513 WFNQELDEEGQQKLNDVNAKNKIYDYCTDSRRFPNGYPPEC 635
>gb|CX621250.1|CX621250 GABR1_57_A12.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_57_A12_A002 3', mRNA sequence
Length = 507
Score = 81.3 bits (171), Expect(2) = 2e-025
Identities = 28/40 (70%), Positives = 36/40 (90%)
Frame = +1 / +1
Query: 1 RLYASLWNADDWATQGGRVKADWSKAPFVASFRGFSADAC 120
R YAS+W+A++WATQGGRVK DWSKAPFVAS++G++A C
Sbjct: 22 RAYASVWDAEEWATQGGRVKTDWSKAPFVASYQGYAAAGC 141
Score = 56.5 bits (117), Expect(2) = 2e-025
Identities = 20/41 (48%), Positives = 25/41 (60%)
Frame = +1 / +1
Query: 202 WWNQQLSDMSYRRMRWVQRKFMIYNYCADAKRFPQGVPAEC 324
W +Q+L + + R Q +MIYNYC D RFPQG P EC
Sbjct: 184 WMSQELDSAAQGQFRRAQASYMIYNYCTDKYRFPQGPPPEC 306
>gb|CF771208.1|CF771208 DSBF1_15_F05.g1_A010 Drought-stressed before flowering Sorghum
bicolor cDNA clone DSBF1_15_F05_A010 3', mRNA sequence
Length = 500
Score = 76.2 bits (160), Expect(2) = 4e-025
Identities = 27/47 (57%), Positives = 37/47 (78%)
Frame = +1 / +3
Query: 4 LYASLWNADDWATQGGRVKADWSKAPFVASFRGFSADACVWDGGRQR 144
++A+LW+ WATQ G+VK DWS +PFV S+RG++ADACV GG +R
Sbjct: 27 VHATLWDGSYWATQQGKVKVDWSNSPFVVSYRGYTADACVPTGGGRR 167
Score = 60.6 bits (126), Expect(2) = 4e-025
Identities = 21/49 (42%), Positives = 29/49 (59%)
Frame = +1 / +1
Query: 202 WWNQQLSDMSYRRMRWVQRKFMIYNYCADAKRFPQGVPAECKLR*GSEV 348
W N+QL + + W ++ +M YNYC D RFPQG PAEC * + +
Sbjct: 205 WMNRQLDAAEWGTVAWAKKNYMHYNYCDDGWRFPQGFPAECSRN*SAAI 351
>gb|BG558983.1|BG558983 RHIZ2_53_B08.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 407
Score = 114 bits (243), Expect(2) = 6e-025
Identities = 43/46 (93%), Positives = 43/46 (93%)
Frame = +1 / +1
Query: 202 WWNQQLSDMSYRRMRWVQRKFMIYNYCADAKRFPQGVPAECKLR*G 339
WWNQQLSDMSY RMRWVQRKFMIYNYC DAKRFPQGVP ECKLR*G
Sbjct: 7 WWNQQLSDMSYPRMRWVQRKFMIYNYCPDAKRFPQGVPPECKLR*G 144
Score = 24.0 bits (46), Expect(2) = 6e-025
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = +2 / +3
Query: 479 MVSCKCSSSRVAFFDLLF 532
+ CKCS+ FF L F
Sbjct: 300 LAQCKCSTHVALFFHLFF 353
>gb|BE361720.1|BE361720 DG1_81_C01.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 610
Score = 74.4 bits (156), Expect(2) = 1e-024
Identities = 26/44 (59%), Positives = 35/44 (79%)
Frame = +1 / +2
Query: 4 LYASLWNADDWATQGGRVKADWSKAPFVASFRGFSADACVWDGG 135
++A+LW+ WATQ G+VK DWS +PFV S+RG++ADACV GG
Sbjct: 50 VHATLWDGSYWATQQGKVKVDWSNSPFVVSYRGYTADACVPTGG 181
Score = 60.6 bits (126), Expect(2) = 1e-024
Identities = 21/49 (42%), Positives = 29/49 (59%)
Frame = +1 / +2
Query: 202 WWNQQLSDMSYRRMRWVQRKFMIYNYCADAKRFPQGVPAECKLR*GSEV 348
W N+QL + + W ++ +M YNYC D RFPQG PAEC * + +
Sbjct: 227 WMNRQLDAAEWGTVAWAKKNYMHYNYCDDGWRFPQGFPAECSRN*SAAI 373
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,103,926,672
Number of Sequences: 832831
Number of extensions: 16075473
Number of successful extensions: 114162
Number of sequences better than 1.0e-020: 97
length of database: 163,786,556
effective HSP length: 55
effective length of database: 117,980,851
effective search space used: 40231470191
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)