TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 131584.2.3
(687 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BE596069.1|BE596069 PI1_51_C11.g1_A002 Pathogen induced ... 230 2e-066
gb|BF421288.1|BF421288 FM1_7_H02.g1_A003 Floral-Induced Mer... 226 2e-063
gb|BE596241.1|BE596241 PI1_51_C11.b1_A002 Pathogen induced ... 230 7e-062
gb|CW022584.1|CW022584 104_162_10431932_5_30000 Sorghum met... 96 2e-055
gb|BG048656.1|BG048656 OV1_21_D05.b1_A002 Ovary 1 (OV1) Sor... 216 2e-055
gb|BG048961.1|BG048961 OV1_21_D05.g1_A002 Ovary 1 (OV1) Sor... 216 2e-055
gb|CD227978.1|CD227978 CCC1_5_F05.b1_A007 Callus culture/ce... 216 2e-055
gb|CD228087.1|CD228087 CCC1_5_F05.g1_A007 Callus culture/ce... 216 2e-055
gb|CD229764.1|CD229764 CCC1_19_H12.g1_A007 Callus culture/c... 216 2e-055
gb|CN148416.1|CN148416 WOUND1_56_H01.b1_A002 Wounded leaves... 216 2e-055
gb|CN148481.1|CN148481 WOUND1_56_H01.g1_A002 Wounded leaves... 216 2e-055
gb|BF421370.1|BF421370 FM1_7_H02.b1_A003 Floral-Induced Mer... 189 3e-047
gb|CW083471.1|CW083471 104_425_10944264_114_32351_084 Sorgh... 107 6e-045
gb|CW083472.1|CW083472 104_425_10944264_114_32387_084 Sorgh... 107 6e-045
gb|CW246898.1|CW246898 104_707_11221527_148_37606_052 Sorgh... 100 1e-042
gb|CW246897.1|CW246897 104_707_11221527_148_35088_052 Sorgh... 97 8e-042
gb|CW102865.1|CW102865 104_471_11011572_116_34429_044 Sorgh... 92 9e-039
gb|CW161652.1|CW161652 104_568_11150526_148_36435_021 Sorgh... 81 3e-023
>gb|BE596069.1|BE596069 PI1_51_C11.g1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 618
Score = 230 bits (497), Expect(3) = 3e-066
Identities = 102/132 (77%), Positives = 108/132 (81%)
Frame = +1 / -1
Query: 283 VGRSLGVPQHDDDRVAPEEHLADESILVHRQSLLFALASLGDLCPHLPHVLEHHVTVAIK 462
VG+S+ VPQ+DDDRVAPEEHLADESILVHRQSLLFALASLGDLCPHLPHVLEHHVTVAIK
Sbjct: 456 VGQSVWVPQNDDDRVAPEEHLADESILVHRQSLLFALASLGDLCPHLPHVLEHHVTVAIK 277
Query: 463 STNPAKQLLVVAAIDENLGVVLNTHH*Y*QRACAKFLFLFLPSLILVRHXXXXXXXXXXX 642
S NPAK LVVAAIDE+LGVVLNTHH* *QRACAKFL LFL SLIL+RH
Sbjct: 276 SANPAK*FLVVAAIDEHLGVVLNTHH*D*QRACAKFLLLFLSSLILIRHRLASALLLRAG 97
Query: 643 XXXXXVALVRSE 678
V LVRS+
Sbjct: 96 GESLRVVLVRSD 61
Score = 225 bits (485), Expect(4) = 2e-066
Identities = 94/98 (95%), Positives = 95/98 (96%)
Frame = -1 / +1
Query: 567 FSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 388
FSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG
Sbjct: 172 FSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 351
Query: 387 KKKALPVNKDRFISKMFLRGDSVIIVLRNPK*SPNRKP 274
KKKALPVNKDRFISKMFLRGDSVIIVLRNP * PN+ P
Sbjct: 352 KKKALPVNKDRFISKMFLRGDSVIIVLRNPN*LPNQPP 465
Score = 222 bits (479), Expect(3) = 6e-063
Identities = 89/101 (88%), Positives = 93/101 (92%)
Frame = -3 / +3
Query: 568 I*HRPSVSTNDEC*EQHPGSHQLPQQQEAAWPGSCF*SPL*HGARERAGDVDRGPQDWQG 389
I*HRPSVS NDEC*EQHPG+HQLPQQQE WPGS F*SPL*HGARERAGDVDRGPQDWQG
Sbjct: 171 I*HRPSVSPNDEC*EQHPGAHQLPQQQETTWPGSRF*SPL*HGARERAGDVDRGPQDWQG 350
Query: 388 QKEGSACEQG*IHQQDVPQGRLGHHRAEEPQVIAQPEARSL 266
QKEGSACEQG*IHQQDVPQGRLGHHR+EEP++IAQP L
Sbjct: 351 QKEGSACEQG*IHQQDVPQGRLGHHRSEEPKLIAQPATLQL 473
Score = 207 bits (446), Expect(4) = 2e-059
Identities = 89/95 (93%), Positives = 90/95 (94%)
Frame = +2 / -2
Query: 284 LGDHLGFLSTMMTESPLRNILLMNLSLFTGRAFFLPLPVLGTSVHISRTFSSTMLQWRSK 463
LG+ GFL TMMTESPLRNILLMNLSLFTGRAFFLPLPVLGTSVHISRTFSSTMLQWRSK
Sbjct: 455 LGNQFGFLRTMMTESPLRNILLMNLSLFTGRAFFLPLPVLGTSVHISRTFSSTMLQWRSK 276
Query: 464 ARTRPSSFLLLRQLMRTWVLFLTLIISTDRGPVLN 568
ARTRPSSFLLLRQLM TWVLFLTLII TDRGPVLN
Sbjct: 275 ARTRPSSFLLLRQLMSTWVLFLTLIIRTDRGPVLN 171
Score = 157 bits (337), Expect(3) = 4e-042
Identities = 63/70 (90%), Positives = 65/70 (92%)
Frame = +3 / -3
Query: 279 SGWAITWGSSAR**PSRP*GTSC**IYPCSQAEPSFCPCQSWGPLSTSPARSRAPCYSGD 458
+GWAI+ GSS R**PSRP*GTSC**IYPCSQAEPSFCPCQSWGPLSTSPARSRAPCYSGD
Sbjct: 460 AGWAISLGSSER**PSRP*GTSC**IYPCSQAEPSFCPCQSWGPLSTSPARSRAPCYSGD 281
Query: 459 QKHEPGQAAS 488
QK EPGQ S
Sbjct: 280 QKREPGQVVS 251
Score = 156 bits (335), Expect(3) = 6e-043
Identities = 74/96 (77%), Positives = 76/96 (79%)
Frame = -2 / +2
Query: 569 NLAQALCQY***VLRTTPRFSSIAATTRSCLAGFVLLIATVTWCSRTCGRCGQRSPXXXX 390
NLAQALCQ ***VLRTTPR SSIAATTR+ LAGF LLIATVTWCSRTCGRCGQRSP
Sbjct: 170 NLAQALCQS***VLRTTPRCSSIAATTRNYLAGFALLIATVTWCSRTCGRCGQRSPRLAR 349
Query: 389 XXXXXXXXXRIDSSARCSSGATRSSSC*GTPSDRPT 282
RIDSSARCSSGATRSSS *GT +D PT
Sbjct: 350 AKRRLCL*TRIDSSARCSSGATRSSSF*GTQTDCPT 457
Score = 36.3 bits (73), Expect(3) = 3e-066
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = +3 / -2
Query: 198 HMNVSSR*PVNHPQHT 245
HMNVSSR*PVN P+HT
Sbjct: 575 HMNVSSR*PVNPPKHT 528
Score = 33.6 bits (67), Expect(4) = 2e-066
Identities = 13/15 (86%), Positives = 14/15 (93%)
Frame = -3 / +1
Query: 244 VCWG*LTGYLELTFM 200
VC+G LTGYLELTFM
Sbjct: 529 VCFGGLTGYLELTFM 573
Score = 31.8 bits (63), Expect(3) = 6e-063
Identities = 12/16 (75%), Positives = 12/16 (75%)
Frame = -2 / +3
Query: 245 CMLGMINWLS*TDVHV 198
CM INWL *TDVHV
Sbjct: 528 CMFWRINWLP*TDVHV 575
Score = 30.9 bits (61), Expect(4) = 2e-059
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = +1 / -3
Query: 199 T*TSVQDNQLIIPNIH 246
T*TSVQ NQLI+ NIH
Sbjct: 574 T*TSVQGNQLILQNIH 527
Score = 30.4 bits (60), Expect(3) = 6e-043
Identities = 13/19 (68%), Positives = 16/19 (84%)
Frame = -1 / +2
Query: 249 MMYVGDD*LVILN*RSCGI 193
+MYV +D*LV LN*RSC +
Sbjct: 524 LMYVLED*LVTLN*RSCDL 580
Score = 30.4 bits (60), Expect(3) = 4e-042
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +3 / -3
Query: 525 S*HSSLVLTEGLC*I 569
S*HSSL LTEGLC*I
Sbjct: 214 S*HSSLGLTEGLC*I 170
Score = 29.5 bits (58), Expect(4) = 2e-066
Identities = 11/13 (84%), Positives = 12/13 (92%)
Frame = -2 / +2
Query: 677 SERTNATRSDSPP 639
SERT+ TRSDSPP
Sbjct: 62 SERTSTTRSDSPP 100
Score = 27.2 bits (53), Expect(3) = 6e-043
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = -1 / +1
Query: 678 LGAHQRHPERL 646
+GAHQ HPERL
Sbjct: 61 VGAHQHHPERL 93
Score = 27.2 bits (53), Expect(3) = 6e-063
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = -3 / +3
Query: 679 SRSAPTPPGAT 647
SRSAP PPGAT
Sbjct: 60 SRSAPAPPGAT 92
Score = 26.3 bits (51), Expect(4) = 2e-059
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = +3 / -3
Query: 645 RVAPGGVGALR 677
RVAPGG GALR
Sbjct: 94 RVAPGGAGALR 62
Score = 25.4 bits (49), Expect(3) = 3e-066
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +1 / -3
Query: 247 HKLQFSTETWLPVGRSLG 300
HKLQFSTET V G
Sbjct: 529 HKLQFSTETLASVNPEKG 476
Score = 23.5 bits (45), Expect(3) = 4e-042
Identities = 6/7 (85%), Positives = 6/7 (85%)
Frame = +2 / -2
Query: 656 GWRWCAP 676
GW WCAP
Sbjct: 83 GWCWCAP 63
Score = 23.1 bits (44), Expect(4) = 2e-066
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -2 / +3
Query: 284 TGSQVSVENCSL 249
T + VSVENCSL
Sbjct: 492 TEANVSVENCSL 527
Score = 23.1 bits (44), Expect(4) = 2e-059
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +3 / -2
Query: 231 HPQHTS*ATVFNRDL 275
+P +*ATVFNRD+
Sbjct: 545 NPPKHT*ATVFNRDI 501
>gb|BF421288.1|BF421288 FM1_7_H02.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 457
Score = 226 bits (488), Expect(3) = 2e-063
Identities = 94/98 (95%), Positives = 96/98 (97%)
Frame = -1 / +1
Query: 567 FSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 388
FSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG
Sbjct: 34 FSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 213
Query: 387 KKKALPVNKDRFISKMFLRGDSVIIVLRNPK*SPNRKP 274
KKKALPVNKDRFISKMFLRGDSVIIVL+NP *SPN+ P
Sbjct: 214 KKKALPVNKDRFISKMFLRGDSVIIVLKNPN*SPNQPP 327
Score = 224 bits (484), Expect(2) = 2e-061
Identities = 90/101 (89%), Positives = 93/101 (92%)
Frame = -3 / +3
Query: 568 I*HRPSVSTNDEC*EQHPGSHQLPQQQEAAWPGSCF*SPL*HGARERAGDVDRGPQDWQG 389
I*HRP VS NDEC*EQHPG+HQLPQQQEA WPGSCF*SPL*HGARERAGDVDRGPQDWQG
Sbjct: 33 I*HRPPVSPNDEC*EQHPGAHQLPQQQEATWPGSCF*SPL*HGARERAGDVDRGPQDWQG 212
Query: 388 QKEGSACEQG*IHQQDVPQGRLGHHRAEEPQVIAQPEARSL 266
QKEGSACEQG*IHQQDVPQG LGHHRAEEP++IAQP L
Sbjct: 213 QKEGSACEQG*IHQQDVPQG*LGHHRAEEPKLIAQPATLQL 335
Score = 217 bits (468), Expect(3) = 1e-061
Identities = 96/106 (90%), Positives = 98/106 (92%)
Frame = +1 / -2
Query: 283 VGRSLGVPQHDDDRVAPEEHLADESILVHRQSLLFALASLGDLCPHLPHVLEHHVTVAIK 462
VGRS+ V QHDDDRV PEEHLADESILVHRQSLLFALASLGDLCPHLPHVLEHHVTVAIK
Sbjct: 318 VGRSVWVLQHDDDRVTPEEHLADESILVHRQSLLFALASLGDLCPHLPHVLEHHVTVAIK 139
Query: 463 STNPAKQLLVVAAIDENLGVVLNTHH*Y*QRACAKFLFLFLPSLIL 600
STNPAK LLVVAAIDE+LGVVLNTHH* *Q ACAKFL LFL SLIL
Sbjct: 138 STNPAK*LLVVAAIDEHLGVVLNTHH*D*QGACAKFLLLFLSSLIL 1
Score = 210 bits (452), Expect(2) = 1e-056
Identities = 90/95 (94%), Positives = 90/95 (94%)
Frame = +2 / -3
Query: 284 LGDHLGFLSTMMTESPLRNILLMNLSLFTGRAFFLPLPVLGTSVHISRTFSSTMLQWRSK 463
LGD GF STMMTESPLRNILLMNLSLFTGRAFFLPLPVLGTSVHISRTFSSTMLQWRSK
Sbjct: 317 LGDQFGFFSTMMTESPLRNILLMNLSLFTGRAFFLPLPVLGTSVHISRTFSSTMLQWRSK 138
Query: 464 ARTRPSSFLLLRQLMRTWVLFLTLIISTDRGPVLN 568
ARTRPSSFLLLRQLM TWVLFLTLII TDRGPVLN
Sbjct: 137 ARTRPSSFLLLRQLMSTWVLFLTLIIRTDRGPVLN 33
Score = 162 bits (349), Expect(3) = 8e-043
Identities = 65/70 (92%), Positives = 67/70 (95%)
Frame = +3 / -1
Query: 279 SGWAITWGSSAR**PSRP*GTSC**IYPCSQAEPSFCPCQSWGPLSTSPARSRAPCYSGD 458
+GWAI+ GSSAR**PS P*GTSC**IYPCSQAEPSFCPCQSWGPLSTSPARSRAPCYSGD
Sbjct: 322 AGWAISLGSSAR**PSHP*GTSC**IYPCSQAEPSFCPCQSWGPLSTSPARSRAPCYSGD 143
Query: 459 QKHEPGQAAS 488
QKHEPGQ AS
Sbjct: 142 QKHEPGQVAS 113
Score = 159 bits (342), Expect(2) = 4e-041
Identities = 75/96 (78%), Positives = 76/96 (79%)
Frame = -2 / +2
Query: 569 NLAQALCQY***VLRTTPRFSSIAATTRSCLAGFVLLIATVTWCSRTCGRCGQRSPXXXX 390
NLAQA CQ ***VLRTTPR SSIAATTRS LAGFVLLIATVTWCSRTCGRCGQRSP
Sbjct: 32 NLAQAPCQS***VLRTTPRCSSIAATTRSYLAGFVLLIATVTWCSRTCGRCGQRSPRLAR 211
Query: 389 XXXXXXXXXRIDSSARCSSGATRSSSC*GTPSDRPT 282
RIDSSARCSSG TRSSSC* T +DRPT
Sbjct: 212 AKRRLCL*TRIDSSARCSSGVTRSSSC*RTQTDRPT 319
Score = 34.1 bits (68), Expect(3) = 1e-061
Identities = 13/16 (81%), Positives = 15/16 (93%)
Frame = +3 / -3
Query: 198 HMNVSSR*PVNHPQHT 245
+MNVSSR*PVN P+HT
Sbjct: 437 YMNVSSR*PVNPPEHT 390
Score = 33.1 bits (66), Expect(3) = 2e-063
Identities = 13/18 (72%), Positives = 13/18 (72%)
Frame = -2 / +3
Query: 245 CMLGMINWLS*TDVHVAS 192
CM INWL *TDVHV S
Sbjct: 390 CMFWRINWLP*TDVHVPS 443
Score = 32.7 bits (65), Expect(2) = 2e-061
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = -3 / +1
Query: 244 VCWG*LTGYLELTFMW 197
VC G LTGYLELTFM+
Sbjct: 391 VCSGGLTGYLELTFMY 438
Score = 31.8 bits (63), Expect(2) = 1e-056
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = +1 / -1
Query: 193 DAT*TSVQDNQLIIPNIH 246
+ T*TSVQ NQLI+ NIH
Sbjct: 442 EGT*TSVQGNQLILQNIH 389
Score = 29.9 bits (59), Expect(2) = 4e-041
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = -1 / +2
Query: 249 MMYVGDD*LVILN*RSC 199
+MYV +D*LV LN*RSC
Sbjct: 386 LMYVLED*LVTLN*RSC 436
Score = 27.2 bits (53), Expect(3) = 8e-043
Identities = 13/15 (86%), Positives = 13/15 (86%)
Frame = +3 / -1
Query: 525 S*HSSLVLTEGLC*I 569
S*HSSL LT GLC*I
Sbjct: 76 S*HSSLGLTGGLC*I 32
Score = 25.4 bits (49), Expect(3) = 1e-061
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +1 / -1
Query: 247 HKLQFSTETWLPVGRSLG 300
HKLQFSTET V G
Sbjct: 391 HKLQFSTETLASVNPEKG 338
Score = 23.5 bits (45), Expect(3) = 8e-043
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +3 / -3
Query: 231 HPQHTS*ATVFNRDL 275
+P +*ATVFNRD+
Sbjct: 407 NPPEHT*ATVFNRDI 363
Score = 23.1 bits (44), Expect(3) = 2e-063
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -2 / +3
Query: 284 TGSQVSVENCSL 249
T + VSVENCSL
Sbjct: 354 TEANVSVENCSL 389
>gb|BE596241.1|BE596241 PI1_51_C11.b1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 533
Score = 230 bits (497), Expect(2) = 6e-061
Identities = 102/132 (77%), Positives = 108/132 (81%)
Frame = +1 / -3
Query: 283 VGRSLGVPQHDDDRVAPEEHLADESILVHRQSLLFALASLGDLCPHLPHVLEHHVTVAIK 462
VG+S+ VPQ+DDDRVAPEEHLADESILVHRQSLLFALASLGDLCPHLPHVLEHHVTVAIK
Sbjct: 456 VGQSVWVPQNDDDRVAPEEHLADESILVHRQSLLFALASLGDLCPHLPHVLEHHVTVAIK 277
Query: 463 STNPAKQLLVVAAIDENLGVVLNTHH*Y*QRACAKFLFLFLPSLILVRHXXXXXXXXXXX 642
S NPAK LVVAAIDE+LGVVLNTHH* *QRACAKFL LFL SLIL+RH
Sbjct: 276 SANPAK*FLVVAAIDEHLGVVLNTHH*D*QRACAKFLLLFLSSLILIRHRLASALLLRAG 97
Query: 643 XXXXXVALVRSE 678
V LVRS+
Sbjct: 96 GESLRVVLVRSD 61
Score = 225 bits (485), Expect(3) = 7e-062
Identities = 94/98 (95%), Positives = 95/98 (96%)
Frame = -1 / +1
Query: 567 FSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 388
FSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG
Sbjct: 172 FSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 351
Query: 387 KKKALPVNKDRFISKMFLRGDSVIIVLRNPK*SPNRKP 274
KKKALPVNKDRFISKMFLRGDSVIIVLRNP * PN+ P
Sbjct: 352 KKKALPVNKDRFISKMFLRGDSVIIVLRNPN*LPNQPP 465
Score = 222 bits (479), Expect(2) = 5e-059
Identities = 89/101 (88%), Positives = 93/101 (92%)
Frame = -3 / +3
Query: 568 I*HRPSVSTNDEC*EQHPGSHQLPQQQEAAWPGSCF*SPL*HGARERAGDVDRGPQDWQG 389
I*HRPSVS NDEC*EQHPG+HQLPQQQE WPGS F*SPL*HGARERAGDVDRGPQDWQG
Sbjct: 171 I*HRPSVSPNDEC*EQHPGAHQLPQQQETTWPGSRF*SPL*HGARERAGDVDRGPQDWQG 350
Query: 388 QKEGSACEQG*IHQQDVPQGRLGHHRAEEPQVIAQPEARSL 266
QKEGSACEQG*IHQQDVPQGRLGHHR+EEP++IAQP L
Sbjct: 351 QKEGSACEQG*IHQQDVPQGRLGHHRSEEPKLIAQPATLQL 473
Score = 207 bits (446), Expect(2) = 3e-054
Identities = 89/95 (93%), Positives = 90/95 (94%)
Frame = +2 / -1
Query: 284 LGDHLGFLSTMMTESPLRNILLMNLSLFTGRAFFLPLPVLGTSVHISRTFSSTMLQWRSK 463
LG+ GFL TMMTESPLRNILLMNLSLFTGRAFFLPLPVLGTSVHISRTFSSTMLQWRSK
Sbjct: 455 LGNQFGFLRTMMTESPLRNILLMNLSLFTGRAFFLPLPVLGTSVHISRTFSSTMLQWRSK 276
Query: 464 ARTRPSSFLLLRQLMRTWVLFLTLIISTDRGPVLN 568
ARTRPSSFLLLRQLM TWVLFLTLII TDRGPVLN
Sbjct: 275 ARTRPSSFLLLRQLMSTWVLFLTLIIRTDRGPVLN 171
Score = 157 bits (337), Expect(3) = 4e-042
Identities = 63/70 (90%), Positives = 65/70 (92%)
Frame = +3 / -2
Query: 279 SGWAITWGSSAR**PSRP*GTSC**IYPCSQAEPSFCPCQSWGPLSTSPARSRAPCYSGD 458
+GWAI+ GSS R**PSRP*GTSC**IYPCSQAEPSFCPCQSWGPLSTSPARSRAPCYSGD
Sbjct: 460 AGWAISLGSSER**PSRP*GTSC**IYPCSQAEPSFCPCQSWGPLSTSPARSRAPCYSGD 281
Query: 459 QKHEPGQAAS 488
QK EPGQ S
Sbjct: 280 QKREPGQVVS 251
Score = 156 bits (335), Expect(2) = 2e-039
Identities = 74/96 (77%), Positives = 76/96 (79%)
Frame = -2 / +2
Query: 569 NLAQALCQY***VLRTTPRFSSIAATTRSCLAGFVLLIATVTWCSRTCGRCGQRSPXXXX 390
NLAQALCQ ***VLRTTPR SSIAATTR+ LAGF LLIATVTWCSRTCGRCGQRSP
Sbjct: 170 NLAQALCQS***VLRTTPRCSSIAATTRNYLAGFALLIATVTWCSRTCGRCGQRSPRLAR 349
Query: 389 XXXXXXXXXRIDSSARCSSGATRSSSC*GTPSDRPT 282
RIDSSARCSSGATRSSS *GT +D PT
Sbjct: 350 AKRRLCL*TRIDSSARCSSGATRSSSF*GTQTDCPT 457
Score = 30.4 bits (60), Expect(3) = 4e-042
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +3 / -2
Query: 525 S*HSSLVLTEGLC*I 569
S*HSSL LTEGLC*I
Sbjct: 214 S*HSSLGLTEGLC*I 170
Score = 29.5 bits (58), Expect(3) = 7e-062
Identities = 11/13 (84%), Positives = 12/13 (92%)
Frame = -2 / +2
Query: 677 SERTNATRSDSPP 639
SERT+ TRSDSPP
Sbjct: 62 SERTSTTRSDSPP 100
Score = 27.2 bits (53), Expect(2) = 2e-039
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = -1 / +1
Query: 678 LGAHQRHPERL 646
+GAHQ HPERL
Sbjct: 61 VGAHQHHPERL 93
Score = 27.2 bits (53), Expect(2) = 5e-059
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = -3 / +3
Query: 679 SRSAPTPPGAT 647
SRSAP PPGAT
Sbjct: 60 SRSAPAPPGAT 92
Score = 26.3 bits (51), Expect(2) = 3e-054
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = +3 / -2
Query: 645 RVAPGGVGALR 677
RVAPGG GALR
Sbjct: 94 RVAPGGAGALR 62
Score = 25.4 bits (49), Expect(2) = 6e-061
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +1 / -2
Query: 247 HKLQFSTETWLPVGRSLG 300
HKLQFSTET V G
Sbjct: 529 HKLQFSTETLASVNPEKG 476
Score = 23.5 bits (45), Expect(3) = 4e-042
Identities = 6/7 (85%), Positives = 6/7 (85%)
Frame = +2 / -1
Query: 656 GWRWCAP 676
GW WCAP
Sbjct: 83 GWCWCAP 63
Score = 23.1 bits (44), Expect(3) = 7e-062
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -2 / +3
Query: 284 TGSQVSVENCSL 249
T + VSVENCSL
Sbjct: 492 TEANVSVENCSL 527
>gb|CW022584.1|CW022584 104_162_10431932_5_30000 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10431932, DNA
sequence
Length = 758
Score = 95.9 bits (203), Expect(6) = 2e-055
Identities = 38/48 (79%), Positives = 41/48 (85%)
Frame = -3 / +2
Query: 409 GPQDWQGQKEGSACEQG*IHQQDVPQGRLGHHRAEEPQVIAQPEARSL 266
GPQD GQKEGSACEQG*IHQQDVP GRLGHHR+EEP++IAQP L
Sbjct: 401 GPQDLAGQKEGSACEQG*IHQQDVPXGRLGHHRSEEPKLIAQPATLQL 544
Score = 95.5 bits (202), Expect(6) = 7e-052
Identities = 38/44 (86%), Positives = 41/44 (93%)
Frame = +3 / -3
Query: 279 SGWAITWGSSAR**PSRP*GTSC**IYPCSQAEPSFCPCQSWGP 410
+GWAI+ GSS R**PSRP*GTSC**IYPCSQAEPSFCP +SWGP
Sbjct: 531 AGWAISLGSSER**PSRP*GTSC**IYPCSQAEPSFCPARSWGP 400
Score = 95.0 bits (201), Expect(6) = 2e-055
Identities = 39/46 (84%), Positives = 41/46 (89%)
Frame = -1 / +3
Query: 543 LMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEV 406
L ++V QVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEV
Sbjct: 171 LKLTVS*CIQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEV 308
Score = 86.3 bits (182), Expect(5) = 1e-043
Identities = 37/45 (82%), Positives = 39/45 (86%)
Frame = -1 / +3
Query: 408 VPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK*SPNRKP 274
VPK +GKKKALPVNKDRFISKMFL GDSVIIVLRNP * PN+ P
Sbjct: 402 VPKIWQGKKKALPVNKDRFISKMFLXGDSVIIVLRNPN*LPNQPP 536
Score = 83.5 bits (176), Expect(6) = 4e-044
Identities = 36/43 (83%), Positives = 39/43 (90%)
Frame = +1 / -1
Query: 283 VGRSLGVPQHDDDRVAPEEHLADESILVHRQSLLFALASLGDL 411
VG+S+ VPQ+DDDRVA EEHLADESILVHRQSLLFAL LGDL
Sbjct: 527 VGQSVWVPQNDDDRVAXEEHLADESILVHRQSLLFALPDLGDL 399
Score = 81.7 bits (172), Expect(6) = 7e-052
Identities = 35/36 (97%), Positives = 35/36 (97%)
Frame = +2 / -2
Query: 407 TSVHISRTFSSTMLQWRSKARTRPSSFLLLRQLMRT 514
TSVHISRTFSSTMLQWRSKARTRPSSFLLLRQLM T
Sbjct: 307 TSVHISRTFSSTMLQWRSKARTRPSSFLLLRQLMST 200
Score = 81.7 bits (172), Expect(3) = 3e-028
Identities = 34/42 (80%), Positives = 36/42 (85%)
Frame = +2 / -2
Query: 284 LGDHLGFLSTMMTESPLRNILLMNLSLFTGRAFFLPLPVLGT 409
LG+ GFL TMMTESP RNILLMNLSLFTGRAFFLP +LGT
Sbjct: 526 LGNQFGFLRTMMTESPXRNILLMNLSLFTGRAFFLPCQILGT 401
Score = 81.7 bits (172), Expect(5) = 1e-043
Identities = 33/42 (78%), Positives = 35/42 (83%)
Frame = -3 / +2
Query: 532 C*EQHPGSHQLPQQQEAAWPGSCF*SPL*HGARERAGDVDRG 407
C + G+HQLPQQQE WPGS F*SPL*HGARERAGDVDRG
Sbjct: 182 CFLMYSGAHQLPQQQETTWPGSRF*SPL*HGARERAGDVDRG 307
Score = 79.0 bits (166), Expect(5) = 2e-028
Identities = 32/36 (88%), Positives = 33/36 (91%)
Frame = -2 / +1
Query: 515 RFSSIAATTRSCLAGFVLLIATVTWCSRTCGRCGQR 408
R SSIAATTR+ LAGF LLIATVTWCSRTCGRCGQR
Sbjct: 199 RCSSIAATTRNYLAGFALLIATVTWCSRTCGRCGQR 306
Score = 78.5 bits (165), Expect(6) = 4e-044
Identities = 33/42 (78%), Positives = 35/42 (83%)
Frame = +1 / -1
Query: 409 LCPHLPHVLEHHVTVAIKSTNPAKQLLVVAAIDENLGVVLNT 534
LCPHLPHVLEHHVTVAIKS NPAK LVVAAIDE+L N+
Sbjct: 305 LCPHLPHVLEHHVTVAIKSANPAK*FLVVAAIDEHLNTSGNS 180
Score = 62.0 bits (129), Expect(3) = 3e-028
Identities = 24/27 (88%), Positives = 24/27 (88%)
Frame = +3 / -3
Query: 408 PLSTSPARSRAPCYSGDQKHEPGQAAS 488
PLSTSPARSRAPCYSGDQK EPGQ S
Sbjct: 306 PLSTSPARSRAPCYSGDQKREPGQVVS 226
Score = 46.4 bits (95), Expect(5) = 2e-028
Identities = 25/43 (58%), Positives = 26/43 (60%)
Frame = -2 / +1
Query: 410 RSPXXXXXXXXXXXXXRIDSSARCSSGATRSSSC*GTPSDRPT 282
RSP RIDSSARCSS ATRSSS *GT +D PT
Sbjct: 400 RSPRSGRAKRRLCL*TRIDSSARCSSXATRSSSF*GTQTDCPT 528
Score = 36.3 bits (73), Expect(6) = 7e-052
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = +3 / -2
Query: 198 HMNVSSR*PVNHPQHT 245
HMNVSSR*PVN P+HT
Sbjct: 646 HMNVSSR*PVNPPKHT 599
Score = 35.0 bits (70), Expect(6) = 2e-055
Identities = 13/15 (86%), Positives = 14/15 (93%)
Frame = -1 / +1
Query: 165 HEFVNRSMNLPPAVF 121
H+FVNRSM LPPAVF
Sbjct: 652 HQFVNRSMYLPPAVF 696
Score = 33.6 bits (67), Expect(6) = 2e-055
Identities = 13/15 (86%), Positives = 14/15 (93%)
Frame = -3 / +3
Query: 244 VCWG*LTGYLELTFM 200
VC+G LTGYLELTFM
Sbjct: 600 VCFGGLTGYLELTFM 644
Score = 31.8 bits (63), Expect(5) = 1e-043
Identities = 12/16 (75%), Positives = 12/16 (75%)
Frame = -2 / +2
Query: 245 CMLGMINWLS*TDVHV 198
CM INWL *TDVHV
Sbjct: 599 CMFWRINWLP*TDVHV 646
Score = 31.8 bits (63), Expect(6) = 7e-052
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = +2 / -1
Query: 122 NTAGGRFILRLTN 160
NTAGGR+ILRLTN
Sbjct: 695 NTAGGRYILRLTN 657
Score = 30.9 bits (61), Expect(6) = 4e-044
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = +1 / -3
Query: 199 T*TSVQDNQLIIPNIH 246
T*TSVQ NQLI+ NIH
Sbjct: 645 T*TSVQGNQLILQNIH 598
Score = 30.9 bits (61), Expect(6) = 4e-044
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = +1 / -3
Query: 121 KYRRW*VHTPVNKLME 168
KY R *VHTPVNKLM+
Sbjct: 696 KYCRR*VHTPVNKLMK 649
Score = 30.4 bits (60), Expect(5) = 2e-028
Identities = 13/19 (68%), Positives = 16/19 (84%)
Frame = -1 / +1
Query: 249 MMYVGDD*LVILN*RSCGI 193
+MYV +D*LV LN*RSC +
Sbjct: 595 LMYVLED*LVTLN*RSCDL 651
Score = 29.0 bits (57), Expect(5) = 1e-043
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = -3 / +3
Query: 160 VC*PEYEPTTCGI 122
VC*PEY PT+C I
Sbjct: 657 VC*PEYVPTSCSI 695
Score = 26.7 bits (52), Expect(6) = 2e-055
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = -1 / +2
Query: 123 FDP*MLSLHFCLL 85
FD *MLSLH CLL
Sbjct: 695 FDL*MLSLHLCLL 733
Score = 26.3 bits (51), Expect(6) = 7e-052
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = +2 / -3
Query: 86 NKQKCKLNIQGS 121
NK KCKLNIQ S
Sbjct: 732 NKHKCKLNIQRS 697
Score = 25.4 bits (49), Expect(6) = 7e-052
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +1 / -3
Query: 247 HKLQFSTETWLPVGRSLG 300
HKLQFSTET V G
Sbjct: 600 HKLQFSTETLASVNPEKG 547
Score = 23.5 bits (45), Expect(5) = 2e-028
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = -2 / +2
Query: 164 MSLLTGV*TYHLRY 123
+SLLTGV TY L+Y
Sbjct: 653 ISLLTGVCTYLLQY 694
Score = 23.1 bits (44), Expect(6) = 2e-055
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -2 / +2
Query: 284 TGSQVSVENCSL 249
T + VSVENCSL
Sbjct: 563 TEANVSVENCSL 598
Score = 23.1 bits (44), Expect(6) = 4e-044
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +3 / -2
Query: 231 HPQHTS*ATVFNRDL 275
+P +*ATVFNRD+
Sbjct: 616 NPPKHT*ATVFNRDI 572
Score = 23.1 bits (44), Expect(3) = 3e-028
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = +3 / -2
Query: 120 QIPQVVGSYSG*QT 161
+I Q VG+YSG*QT
Sbjct: 697 KILQEVGTYSG*QT 656
Score = 23.1 bits (44), Expect(6) = 4e-044
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = +3 / -1
Query: 87 ISRSANSTFRDQ 122
IS SA+STF+DQ
Sbjct: 731 ISTSASSTFKDQ 696
Score = 22.6 bits (43), Expect(5) = 1e-043
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = -2 / +3
Query: 122 LIPEC*VCTSAY 87
LI EC* CT AY
Sbjct: 696 LIFEC*ACTCAY 731
Score = 21.7 bits (41), Expect(5) = 2e-028
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = -3 / +1
Query: 121 *SLNVEFALLLI 86
*SLNVE AL+LI
Sbjct: 697 *SLNVELALVLI 732
>gb|BG048656.1|BG048656 OV1_21_D05.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 404
Score = 216 bits (467), Expect = 2e-055
Identities = 91/92 (98%), Positives = 91/92 (98%)
Frame = -1 / +2
Query: 567 FSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 388
FSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG
Sbjct: 113 FSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 292
Query: 387 KKKALPVNKDRFISKMFLRGDSVIIVLRNPK* 292
KKKALPVNKDRFISKMFLRGDSVIIVLRNP *
Sbjct: 293 KKKALPVNKDRFISKMFLRGDSVIIVLRNPN* 388
Score = 174 bits (374), Expect = 1e-042
Identities = 78/90 (86%), Positives = 81/90 (90%)
Frame = +2 / -3
Query: 299 GFLSTMMTESPLRNILLMNLSLFTGRAFFLPLPVLGTSVHISRTFSSTMLQWRSKARTRP 478
GFL TMMTESP RNILLMNLSLFTGRAFFLPLPV GTSVHIS TFS TMLQ RSKA TRP
Sbjct: 381 GFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQCRSKALTRP 202
Query: 479 SSFLLLRQLMRTWVLFLTLIISTDRGPVLN 568
SSFLL RQL+RT VLFLTLI+ST+RGPVLN
Sbjct: 201 SSFLLFRQLIRT*VLFLTLIMSTERGPVLN 112
Score = 125 bits (268), Expect = 6e-028
Identities = 53/98 (54%), Positives = 72/98 (73%)
Frame = +1 / -2
Query: 292 SLGVPQHDDDRVAPEEHLADESILVHRQSLLFALASLGDLCPHLPHVLEHHVTVAIKSTN 471
S+ VP+++DDR+ EEHLA E I VHR+SLL A L L PHLP++LE+HV + IK ++
Sbjct: 388 SVRVPENNDDRIPTEEHLAYEPIFVHRKSLLLAFTGLWYLSPHLPNILENHVAMPIKGSH 209
Query: 472 PAKQLLVVAAIDENLGVVLNTHH*Y*QRACAKFLFLFL 585
KQLLVV A+D+NL +VL+ HH +*+R A+ LFL L
Sbjct: 208 ATKQLLVVPAVDKNLSIVLDAHHEH*ERTGAELLFLLL 95
Score = 110 bits (234), Expect = 3e-023
Identities = 49/90 (54%), Positives = 64/90 (71%)
Frame = -3 / +1
Query: 562 HRPSVSTNDEC*EQHPGSHQLPQQQEAAWPGSCF*SPL*HGARERAGDVDRGPQDWQGQK 383
HR S+S +DE EQ+ GS+QLP+QQEAAW *S L HG+RE GDVD G +D Q+
Sbjct: 118 HRSSLSAHDERQEQYSGSYQLPEQQEAAWSRESL*SALQHGSREC*GDVD*GTKDR*RQE 297
Query: 382 EGSACEQG*IHQQDVPQGRLGHHRAEEPQV 293
EGS+ EQ *+H+QDVP GHH ++EP++
Sbjct: 298 EGSSGEQR*VHKQDVPPWGFGHHCSQEPEL 387
>gb|BG048961.1|BG048961 OV1_21_D05.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 461
Score = 216 bits (467), Expect = 2e-055
Identities = 91/92 (98%), Positives = 91/92 (98%)
Frame = -1 / +3
Query: 567 FSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 388
FSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG
Sbjct: 93 FSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 272
Query: 387 KKKALPVNKDRFISKMFLRGDSVIIVLRNPK* 292
KKKALPVNKDRFISKMFLRGDSVIIVLRNP *
Sbjct: 273 KKKALPVNKDRFISKMFLRGDSVIIVLRNPN* 368
Score = 174 bits (374), Expect = 1e-042
Identities = 78/90 (86%), Positives = 81/90 (90%)
Frame = +2 / -2
Query: 299 GFLSTMMTESPLRNILLMNLSLFTGRAFFLPLPVLGTSVHISRTFSSTMLQWRSKARTRP 478
GFL TMMTESP RNILLMNLSLFTGRAFFLPLPV GTSVHIS TFS TMLQ RSKA TRP
Sbjct: 361 GFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQCRSKALTRP 182
Query: 479 SSFLLLRQLMRTWVLFLTLIISTDRGPVLN 568
SSFLL RQL+RT VLFLTLI+ST+RGPVLN
Sbjct: 181 SSFLLFRQLIRT*VLFLTLIMSTERGPVLN 92
Score = 125 bits (268), Expect = 6e-028
Identities = 53/98 (54%), Positives = 72/98 (73%)
Frame = +1 / -1
Query: 292 SLGVPQHDDDRVAPEEHLADESILVHRQSLLFALASLGDLCPHLPHVLEHHVTVAIKSTN 471
S+ VP+++DDR+ EEHLA E I VHR+SLL A L L PHLP++LE+HV + IK ++
Sbjct: 368 SVRVPENNDDRIPTEEHLAYEPIFVHRKSLLLAFTGLWYLSPHLPNILENHVAMPIKGSH 189
Query: 472 PAKQLLVVAAIDENLGVVLNTHH*Y*QRACAKFLFLFL 585
KQLLVV A+D+NL +VL+ HH +*+R A+ LFL L
Sbjct: 188 ATKQLLVVPAVDKNLSIVLDAHHEH*ERTGAELLFLLL 75
Score = 110 bits (234), Expect = 3e-023
Identities = 49/90 (54%), Positives = 64/90 (71%)
Frame = -3 / +2
Query: 562 HRPSVSTNDEC*EQHPGSHQLPQQQEAAWPGSCF*SPL*HGARERAGDVDRGPQDWQGQK 383
HR S+S +DE EQ+ GS+QLP+QQEAAW *S L HG+RE GDVD G +D Q+
Sbjct: 98 HRSSLSAHDERQEQYSGSYQLPEQQEAAWSRESL*SALQHGSREC*GDVD*GTKDR*RQE 277
Query: 382 EGSACEQG*IHQQDVPQGRLGHHRAEEPQV 293
EGS+ EQ *+H+QDVP GHH ++EP++
Sbjct: 278 EGSSGEQR*VHKQDVPPWGFGHHCSQEPEL 367
>gb|CD227978.1|CD227978 CCC1_5_F05.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_5_F05_A007 3', mRNA sequence
Length = 657
Score = 216 bits (467), Expect = 2e-055
Identities = 91/92 (98%), Positives = 91/92 (98%)
Frame = -1 / +3
Query: 567 FSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 388
FSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG
Sbjct: 54 FSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 233
Query: 387 KKKALPVNKDRFISKMFLRGDSVIIVLRNPK* 292
KKKALPVNKDRFISKMFLRGDSVIIVLRNP *
Sbjct: 234 KKKALPVNKDRFISKMFLRGDSVIIVLRNPN* 329
Score = 174 bits (374), Expect = 1e-042
Identities = 78/90 (86%), Positives = 81/90 (90%)
Frame = +2 / -3
Query: 299 GFLSTMMTESPLRNILLMNLSLFTGRAFFLPLPVLGTSVHISRTFSSTMLQWRSKARTRP 478
GFL TMMTESP RNILLMNLSLFTGRAFFLPLPV GTSVHIS TFS TMLQ RSKA TRP
Sbjct: 322 GFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQCRSKALTRP 143
Query: 479 SSFLLLRQLMRTWVLFLTLIISTDRGPVLN 568
SSFLL RQL+RT VLFLTLI+ST+RGPVLN
Sbjct: 142 SSFLLFRQLIRT*VLFLTLIMSTERGPVLN 53
Score = 125 bits (268), Expect = 6e-028
Identities = 53/98 (54%), Positives = 72/98 (73%)
Frame = +1 / -2
Query: 292 SLGVPQHDDDRVAPEEHLADESILVHRQSLLFALASLGDLCPHLPHVLEHHVTVAIKSTN 471
S+ VP+++DDR+ EEHLA E I VHR+SLL A L L PHLP++LE+HV + IK ++
Sbjct: 329 SVRVPENNDDRIPTEEHLAYEPIFVHRKSLLLAFTGLWYLSPHLPNILENHVAMPIKGSH 150
Query: 472 PAKQLLVVAAIDENLGVVLNTHH*Y*QRACAKFLFLFL 585
KQLLVV A+D+NL +VL+ HH +*+R A+ LFL L
Sbjct: 149 ATKQLLVVPAVDKNLSIVLDAHHEH*ERTGAELLFLLL 36
Score = 110 bits (234), Expect = 3e-023
Identities = 49/90 (54%), Positives = 64/90 (71%)
Frame = -3 / +2
Query: 562 HRPSVSTNDEC*EQHPGSHQLPQQQEAAWPGSCF*SPL*HGARERAGDVDRGPQDWQGQK 383
HR S+S +DE EQ+ GS+QLP+QQEAAW *S L HG+RE GDVD G +D Q+
Sbjct: 59 HRSSLSAHDERQEQYSGSYQLPEQQEAAWSRESL*SALQHGSREC*GDVD*GTKDR*RQE 238
Query: 382 EGSACEQG*IHQQDVPQGRLGHHRAEEPQV 293
EGS+ EQ *+H+QDVP GHH ++EP++
Sbjct: 239 EGSSGEQR*VHKQDVPPWGFGHHCSQEPEL 328
>gb|CD228087.1|CD228087 CCC1_5_F05.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_5_F05_A007 5', mRNA sequence
Length = 664
Score = 216 bits (467), Expect = 2e-055
Identities = 91/92 (98%), Positives = 91/92 (98%)
Frame = -1 / +2
Query: 567 FSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 388
FSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG
Sbjct: 149 FSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 328
Query: 387 KKKALPVNKDRFISKMFLRGDSVIIVLRNPK* 292
KKKALPVNKDRFISKMFLRGDSVIIVLRNP *
Sbjct: 329 KKKALPVNKDRFISKMFLRGDSVIIVLRNPN* 424
Score = 174 bits (374), Expect = 1e-042
Identities = 78/90 (86%), Positives = 81/90 (90%)
Frame = +2 / -2
Query: 299 GFLSTMMTESPLRNILLMNLSLFTGRAFFLPLPVLGTSVHISRTFSSTMLQWRSKARTRP 478
GFL TMMTESP RNILLMNLSLFTGRAFFLPLPV GTSVHIS TFS TMLQ RSKA TRP
Sbjct: 417 GFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQCRSKALTRP 238
Query: 479 SSFLLLRQLMRTWVLFLTLIISTDRGPVLN 568
SSFLL RQL+RT VLFLTLI+ST+RGPVLN
Sbjct: 237 SSFLLFRQLIRT*VLFLTLIMSTERGPVLN 148
Score = 125 bits (268), Expect = 6e-028
Identities = 53/98 (54%), Positives = 72/98 (73%)
Frame = +1 / -1
Query: 292 SLGVPQHDDDRVAPEEHLADESILVHRQSLLFALASLGDLCPHLPHVLEHHVTVAIKSTN 471
S+ VP+++DDR+ EEHLA E I VHR+SLL A L L PHLP++LE+HV + IK ++
Sbjct: 424 SVRVPENNDDRIPTEEHLAYEPIFVHRKSLLLAFTGLWYLSPHLPNILENHVAMPIKGSH 245
Query: 472 PAKQLLVVAAIDENLGVVLNTHH*Y*QRACAKFLFLFL 585
KQLLVV A+D+NL +VL+ HH +*+R A+ LFL L
Sbjct: 244 ATKQLLVVPAVDKNLSIVLDAHHEH*ERTGAELLFLLL 131
Score = 110 bits (234), Expect = 3e-023
Identities = 49/90 (54%), Positives = 64/90 (71%)
Frame = -3 / +1
Query: 562 HRPSVSTNDEC*EQHPGSHQLPQQQEAAWPGSCF*SPL*HGARERAGDVDRGPQDWQGQK 383
HR S+S +DE EQ+ GS+QLP+QQEAAW *S L HG+RE GDVD G +D Q+
Sbjct: 154 HRSSLSAHDERQEQYSGSYQLPEQQEAAWSRESL*SALQHGSREC*GDVD*GTKDR*RQE 333
Query: 382 EGSACEQG*IHQQDVPQGRLGHHRAEEPQV 293
EGS+ EQ *+H+QDVP GHH ++EP++
Sbjct: 334 EGSSGEQR*VHKQDVPPWGFGHHCSQEPEL 423
>gb|CD229764.1|CD229764 CCC1_19_H12.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_19_H12_A007 5', mRNA sequence
Length = 569
Score = 216 bits (467), Expect = 2e-055
Identities = 91/92 (98%), Positives = 91/92 (98%)
Frame = -1 / +2
Query: 567 FSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 388
FSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG
Sbjct: 140 FSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 319
Query: 387 KKKALPVNKDRFISKMFLRGDSVIIVLRNPK* 292
KKKALPVNKDRFISKMFLRGDSVIIVLRNP *
Sbjct: 320 KKKALPVNKDRFISKMFLRGDSVIIVLRNPN* 415
Score = 174 bits (374), Expect = 1e-042
Identities = 78/90 (86%), Positives = 81/90 (90%)
Frame = +2 / -3
Query: 299 GFLSTMMTESPLRNILLMNLSLFTGRAFFLPLPVLGTSVHISRTFSSTMLQWRSKARTRP 478
GFL TMMTESP RNILLMNLSLFTGRAFFLPLPV GTSVHIS TFS TMLQ RSKA TRP
Sbjct: 408 GFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQCRSKALTRP 229
Query: 479 SSFLLLRQLMRTWVLFLTLIISTDRGPVLN 568
SSFLL RQL+RT VLFLTLI+ST+RGPVLN
Sbjct: 228 SSFLLFRQLIRT*VLFLTLIMSTERGPVLN 139
Score = 125 bits (268), Expect = 6e-028
Identities = 53/98 (54%), Positives = 72/98 (73%)
Frame = +1 / -2
Query: 292 SLGVPQHDDDRVAPEEHLADESILVHRQSLLFALASLGDLCPHLPHVLEHHVTVAIKSTN 471
S+ VP+++DDR+ EEHLA E I VHR+SLL A L L PHLP++LE+HV + IK ++
Sbjct: 415 SVRVPENNDDRIPTEEHLAYEPIFVHRKSLLLAFTGLWYLSPHLPNILENHVAMPIKGSH 236
Query: 472 PAKQLLVVAAIDENLGVVLNTHH*Y*QRACAKFLFLFL 585
KQLLVV A+D+NL +VL+ HH +*+R A+ LFL L
Sbjct: 235 ATKQLLVVPAVDKNLSIVLDAHHEH*ERTGAELLFLLL 122
Score = 110 bits (234), Expect = 3e-023
Identities = 49/90 (54%), Positives = 64/90 (71%)
Frame = -3 / +1
Query: 562 HRPSVSTNDEC*EQHPGSHQLPQQQEAAWPGSCF*SPL*HGARERAGDVDRGPQDWQGQK 383
HR S+S +DE EQ+ GS+QLP+QQEAAW *S L HG+RE GDVD G +D Q+
Sbjct: 145 HRSSLSAHDERQEQYSGSYQLPEQQEAAWSRESL*SALQHGSREC*GDVD*GTKDR*RQE 324
Query: 382 EGSACEQG*IHQQDVPQGRLGHHRAEEPQV 293
EGS+ EQ *+H+QDVP GHH ++EP++
Sbjct: 325 EGSSGEQR*VHKQDVPPWGFGHHCSQEPEL 414
>gb|CN148416.1|CN148416 WOUND1_56_H01.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_56_H01_A002 3', mRNA sequence
Length = 600
Score = 216 bits (467), Expect = 2e-055
Identities = 91/92 (98%), Positives = 91/92 (98%)
Frame = -1 / +2
Query: 567 FSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 388
FSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG
Sbjct: 80 FSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 259
Query: 387 KKKALPVNKDRFISKMFLRGDSVIIVLRNPK* 292
KKKALPVNKDRFISKMFLRGDSVIIVLRNP *
Sbjct: 260 KKKALPVNKDRFISKMFLRGDSVIIVLRNPN* 355
Score = 174 bits (374), Expect = 1e-042
Identities = 78/90 (86%), Positives = 81/90 (90%)
Frame = +2 / -1
Query: 299 GFLSTMMTESPLRNILLMNLSLFTGRAFFLPLPVLGTSVHISRTFSSTMLQWRSKARTRP 478
GFL TMMTESP RNILLMNLSLFTGRAFFLPLPV GTSVHIS TFS TMLQ RSKA TRP
Sbjct: 348 GFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQCRSKALTRP 169
Query: 479 SSFLLLRQLMRTWVLFLTLIISTDRGPVLN 568
SSFLL RQL+RT VLFLTLI+ST+RGPVLN
Sbjct: 168 SSFLLFRQLIRT*VLFLTLIMSTERGPVLN 79
Score = 125 bits (268), Expect = 6e-028
Identities = 53/98 (54%), Positives = 72/98 (73%)
Frame = +1 / -3
Query: 292 SLGVPQHDDDRVAPEEHLADESILVHRQSLLFALASLGDLCPHLPHVLEHHVTVAIKSTN 471
S+ VP+++DDR+ EEHLA E I VHR+SLL A L L PHLP++LE+HV + IK ++
Sbjct: 355 SVRVPENNDDRIPTEEHLAYEPIFVHRKSLLLAFTGLWYLSPHLPNILENHVAMPIKGSH 176
Query: 472 PAKQLLVVAAIDENLGVVLNTHH*Y*QRACAKFLFLFL 585
KQLLVV A+D+NL +VL+ HH +*+R A+ LFL L
Sbjct: 175 ATKQLLVVPAVDKNLSIVLDAHHEH*ERTGAELLFLLL 62
Score = 110 bits (234), Expect = 3e-023
Identities = 49/90 (54%), Positives = 64/90 (71%)
Frame = -3 / +1
Query: 562 HRPSVSTNDEC*EQHPGSHQLPQQQEAAWPGSCF*SPL*HGARERAGDVDRGPQDWQGQK 383
HR S+S +DE EQ+ GS+QLP+QQEAAW *S L HG+RE GDVD G +D Q+
Sbjct: 85 HRSSLSAHDERQEQYSGSYQLPEQQEAAWSRESL*SALQHGSREC*GDVD*GTKDR*RQE 264
Query: 382 EGSACEQG*IHQQDVPQGRLGHHRAEEPQV 293
EGS+ EQ *+H+QDVP GHH ++EP++
Sbjct: 265 EGSSGEQR*VHKQDVPPWGFGHHCSQEPEL 354
>gb|CN148481.1|CN148481 WOUND1_56_H01.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_56_H01_A002 5', mRNA sequence
Length = 661
Score = 216 bits (467), Expect = 2e-055
Identities = 91/92 (98%), Positives = 91/92 (98%)
Frame = -1 / +1
Query: 567 FSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 388
FSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG
Sbjct: 124 FSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 303
Query: 387 KKKALPVNKDRFISKMFLRGDSVIIVLRNPK* 292
KKKALPVNKDRFISKMFLRGDSVIIVLRNP *
Sbjct: 304 KKKALPVNKDRFISKMFLRGDSVIIVLRNPN* 399
Score = 174 bits (374), Expect = 1e-042
Identities = 78/90 (86%), Positives = 81/90 (90%)
Frame = +2 / -3
Query: 299 GFLSTMMTESPLRNILLMNLSLFTGRAFFLPLPVLGTSVHISRTFSSTMLQWRSKARTRP 478
GFL TMMTESP RNILLMNLSLFTGRAFFLPLPV GTSVHIS TFS TMLQ RSKA TRP
Sbjct: 392 GFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQCRSKALTRP 213
Query: 479 SSFLLLRQLMRTWVLFLTLIISTDRGPVLN 568
SSFLL RQL+RT VLFLTLI+ST+RGPVLN
Sbjct: 212 SSFLLFRQLIRT*VLFLTLIMSTERGPVLN 123
Score = 125 bits (268), Expect = 6e-028
Identities = 53/98 (54%), Positives = 72/98 (73%)
Frame = +1 / -2
Query: 292 SLGVPQHDDDRVAPEEHLADESILVHRQSLLFALASLGDLCPHLPHVLEHHVTVAIKSTN 471
S+ VP+++DDR+ EEHLA E I VHR+SLL A L L PHLP++LE+HV + IK ++
Sbjct: 399 SVRVPENNDDRIPTEEHLAYEPIFVHRKSLLLAFTGLWYLSPHLPNILENHVAMPIKGSH 220
Query: 472 PAKQLLVVAAIDENLGVVLNTHH*Y*QRACAKFLFLFL 585
KQLLVV A+D+NL +VL+ HH +*+R A+ LFL L
Sbjct: 219 ATKQLLVVPAVDKNLSIVLDAHHEH*ERTGAELLFLLL 106
Score = 110 bits (234), Expect = 3e-023
Identities = 49/90 (54%), Positives = 64/90 (71%)
Frame = -3 / +3
Query: 562 HRPSVSTNDEC*EQHPGSHQLPQQQEAAWPGSCF*SPL*HGARERAGDVDRGPQDWQGQK 383
HR S+S +DE EQ+ GS+QLP+QQEAAW *S L HG+RE GDVD G +D Q+
Sbjct: 129 HRSSLSAHDERQEQYSGSYQLPEQQEAAWSRESL*SALQHGSREC*GDVD*GTKDR*RQE 308
Query: 382 EGSACEQG*IHQQDVPQGRLGHHRAEEPQV 293
EGS+ EQ *+H+QDVP GHH ++EP++
Sbjct: 309 EGSSGEQR*VHKQDVPPWGFGHHCSQEPEL 398
>gb|BF421370.1|BF421370 FM1_7_H02.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 390
Score = 189 bits (408), Expect = 3e-047
Identities = 86/111 (77%), Positives = 89/111 (80%)
Frame = +1 / -1
Query: 346 ADESILVHRQSLLFALASLGDLCPHLPHVLEHHVTVAIKSTNPAKQLLVVAAIDENLGVV 525
ADESILVHRQSLLFALASLGDLCPHLPHVLEHHVTVAIKSTNPAK LLVVAAIDE+LGVV
Sbjct: 390 ADESILVHRQSLLFALASLGDLCPHLPHVLEHHVTVAIKSTNPAK*LLVVAAIDEHLGVV 211
Query: 526 LNTHH*Y*QRACAKFLFLFLPSLILVRHXXXXXXXXXXXXXXXXVALVRSE 678
LNTHH* *Q ACAKFL LFL SLIL+RH V LVRS+
Sbjct: 210 LNTHH*D*QGACAKFLLLFLSSLILIRHRLASALLLRAGGESLRVVLVRSD 58
Score = 180 bits (387), Expect(2) = 4e-047
Identities = 74/74 (100%), Positives = 74/74 (100%)
Frame = -1 / +1
Query: 567 FSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 388
FSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG
Sbjct: 169 FSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 348
Query: 387 KKKALPVNKDRFIS 346
KKKALPVNKDRFIS
Sbjct: 349 KKKALPVNKDRFIS 390
Score = 177 bits (380), Expect(2) = 2e-045
Identities = 70/74 (94%), Positives = 71/74 (95%)
Frame = -3 / +3
Query: 568 I*HRPSVSTNDEC*EQHPGSHQLPQQQEAAWPGSCF*SPL*HGARERAGDVDRGPQDWQG 389
I*HRP VS NDEC*EQHPG+HQLPQQQEA WPGSCF*SPL*HGARERAGDVDRGPQDWQG
Sbjct: 168 I*HRPPVSPNDEC*EQHPGAHQLPQQQEATWPGSCF*SPL*HGARERAGDVDRGPQDWQG 347
Query: 388 QKEGSACEQG*IHQ 347
QKEGSACEQG*IHQ
Sbjct: 348 QKEGSACEQG*IHQ 389
Score = 168 bits (361), Expect(2) = 1e-042
Identities = 72/74 (97%), Positives = 72/74 (97%)
Frame = +2 / -2
Query: 347 LMNLSLFTGRAFFLPLPVLGTSVHISRTFSSTMLQWRSKARTRPSSFLLLRQLMRTWVLF 526
LMNLSLFTGRAFFLPLPVLGTSVHISRTFSSTMLQWRSKARTRPSSFLLLRQLM TWVLF
Sbjct: 389 LMNLSLFTGRAFFLPLPVLGTSVHISRTFSSTMLQWRSKARTRPSSFLLLRQLMSTWVLF 210
Query: 527 LTLIISTDRGPVLN 568
LTLII TDRGPVLN
Sbjct: 209 LTLIIRTDRGPVLN 168
Score = 120 bits (256), Expect(3) = 3e-030
Identities = 46/47 (97%), Positives = 46/47 (97%)
Frame = +3 / -3
Query: 348 **IYPCSQAEPSFCPCQSWGPLSTSPARSRAPCYSGDQKHEPGQAAS 488
**IYPCSQAEPSFCPCQSWGPLSTSPARSRAPCYSGDQKHEPGQ AS
Sbjct: 388 **IYPCSQAEPSFCPCQSWGPLSTSPARSRAPCYSGDQKHEPGQVAS 248
Score = 118 bits (252), Expect(2) = 5e-028
Identities = 57/74 (77%), Positives = 57/74 (77%)
Frame = -2 / +2
Query: 569 NLAQALCQY***VLRTTPRFSSIAATTRSCLAGFVLLIATVTWCSRTCGRCGQRSPXXXX 390
NLAQA CQ ***VLRTTPR SSIAATTRS LAGFVLLIATVTWCSRTCGRCGQRSP
Sbjct: 167 NLAQAPCQS***VLRTTPRCSSIAATTRSYLAGFVLLIATVTWCSRTCGRCGQRSPRLAR 346
Query: 389 XXXXXXXXXRIDSS 348
RIDSS
Sbjct: 347 AKRRLCL*TRIDSS 388
Score = 29.5 bits (58), Expect(2) = 4e-047
Identities = 11/13 (84%), Positives = 12/13 (92%)
Frame = -2 / +2
Query: 677 SERTNATRSDSPP 639
SERT+ TRSDSPP
Sbjct: 59 SERTSTTRSDSPP 97
Score = 27.2 bits (53), Expect(3) = 3e-030
Identities = 13/15 (86%), Positives = 13/15 (86%)
Frame = +3 / -3
Query: 525 S*HSSLVLTEGLC*I 569
S*HSSL LT GLC*I
Sbjct: 211 S*HSSLGLTGGLC*I 167
Score = 27.2 bits (53), Expect(2) = 5e-028
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = -1 / +1
Query: 678 LGAHQRHPERL 646
+GAHQ HPERL
Sbjct: 58 VGAHQHHPERL 90
Score = 27.2 bits (53), Expect(2) = 2e-045
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = -3 / +3
Query: 679 SRSAPTPPGAT 647
SRSAP PPGAT
Sbjct: 57 SRSAPAPPGAT 89
Score = 26.3 bits (51), Expect(2) = 1e-042
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = +3 / -3
Query: 645 RVAPGGVGALR 677
RVAPGG GALR
Sbjct: 91 RVAPGGAGALR 59
Score = 23.5 bits (45), Expect(3) = 3e-030
Identities = 6/7 (85%), Positives = 6/7 (85%)
Frame = +2 / -2
Query: 656 GWRWCAP 676
GW WCAP
Sbjct: 80 GWCWCAP 60
>gb|CW083471.1|CW083471 104_425_10944264_114_32351_084 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10944264, DNA
sequence
Length = 679
Score = 107 bits (228), Expect(2) = 6e-045
Identities = 41/48 (85%), Positives = 44/48 (91%)
Frame = -3 / -3
Query: 409 GPQDWQGQKEGSACEQG*IHQQDVPQGRLGHHRAEEPQVIAQPEARSL 266
GPQDWQGQKEGSACEQG*IHQQDVPQGRLGHHR+EEP++IAQP L
Sbjct: 182 GPQDWQGQKEGSACEQG*IHQQDVPQGRLGHHRSEEPKLIAQPATLQL 39
Score = 101 bits (215), Expect(2) = 3e-039
Identities = 40/44 (90%), Positives = 42/44 (95%)
Frame = +3 / +1
Query: 279 SGWAITWGSSAR**PSRP*GTSC**IYPCSQAEPSFCPCQSWGP 410
+GWAI+ GSS R**PSRP*GTSC**IYPCSQAEPSFCPCQSWGP
Sbjct: 52 AGWAISLGSSER**PSRP*GTSC**IYPCSQAEPSFCPCQSWGP 183
Score = 97.3 bits (206), Expect(2) = 6e-038
Identities = 41/45 (91%), Positives = 42/45 (93%)
Frame = -1 / -1
Query: 408 VPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK*SPNRKP 274
VPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNP * PN+ P
Sbjct: 181 VPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPN*LPNQPP 47
Score = 95.0 bits (201), Expect(2) = 6e-045
Identities = 39/46 (84%), Positives = 41/46 (89%)
Frame = -1 / -1
Query: 543 LMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEV 406
L ++V QVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEV
Sbjct: 412 LKLTVS*CIQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEV 275
Score = 91.8 bits (194), Expect(2) = 2e-035
Identities = 39/43 (90%), Positives = 42/43 (97%)
Frame = +1 / +2
Query: 283 VGRSLGVPQHDDDRVAPEEHLADESILVHRQSLLFALASLGDL 411
VG+S+ VPQ+DDDRVAPEEHLADESILVHRQSLLFALASLGDL
Sbjct: 56 VGQSVWVPQNDDDRVAPEEHLADESILVHRQSLLFALASLGDL 184
Score = 90.4 bits (191), Expect(2) = 5e-030
Identities = 38/42 (90%), Positives = 39/42 (92%)
Frame = +2 / +3
Query: 284 LGDHLGFLSTMMTESPLRNILLMNLSLFTGRAFFLPLPVLGT 409
LG+ GFL TMMTESPLRNILLMNLSLFTGRAFFLPLPVLGT
Sbjct: 57 LGNQFGFLRTMMTESPLRNILLMNLSLFTGRAFFLPLPVLGT 182
Score = 81.7 bits (172), Expect(2) = 6e-038
Identities = 33/42 (78%), Positives = 35/42 (83%)
Frame = -3 / -3
Query: 532 C*EQHPGSHQLPQQQEAAWPGSCF*SPL*HGARERAGDVDRG 407
C + G+HQLPQQQE WPGS F*SPL*HGARERAGDVDRG
Sbjct: 401 CFLMYSGAHQLPQQQETTWPGSRF*SPL*HGARERAGDVDRG 276
Score = 81.7 bits (172), Expect(2) = 3e-039
Identities = 35/36 (97%), Positives = 35/36 (97%)
Frame = +2 / +3
Query: 407 TSVHISRTFSSTMLQWRSKARTRPSSFLLLRQLMRT 514
TSVHISRTFSSTMLQWRSKARTRPSSFLLLRQLM T
Sbjct: 276 TSVHISRTFSSTMLQWRSKARTRPSSFLLLRQLMST 383
Score = 79.0 bits (166), Expect(2) = 6e-023
Identities = 32/36 (88%), Positives = 33/36 (91%)
Frame = -2 / -2
Query: 515 RFSSIAATTRSCLAGFVLLIATVTWCSRTCGRCGQR 408
R SSIAATTR+ LAGF LLIATVTWCSRTCGRCGQR
Sbjct: 384 RCSSIAATTRNYLAGFALLIATVTWCSRTCGRCGQR 277
Score = 78.5 bits (165), Expect(2) = 2e-035
Identities = 33/42 (78%), Positives = 35/42 (83%)
Frame = +1 / +2
Query: 409 LCPHLPHVLEHHVTVAIKSTNPAKQLLVVAAIDENLGVVLNT 534
LCPHLPHVLEHHVTVAIKS NPAK LVVAAIDE+L N+
Sbjct: 278 LCPHLPHVLEHHVTVAIKSANPAK*FLVVAAIDEHLNTSGNS 403
Score = 62.0 bits (129), Expect(2) = 5e-030
Identities = 24/27 (88%), Positives = 24/27 (88%)
Frame = +3 / +1
Query: 408 PLSTSPARSRAPCYSGDQKHEPGQAAS 488
PLSTSPARSRAPCYSGDQK EPGQ S
Sbjct: 277 PLSTSPARSRAPCYSGDQKREPGQVVS 357
Score = 49.6 bits (102), Expect(2) = 6e-023
Identities = 26/43 (60%), Positives = 27/43 (62%)
Frame = -2 / -2
Query: 410 RSPXXXXXXXXXXXXXRIDSSARCSSGATRSSSC*GTPSDRPT 282
RSP RIDSSARCSSGATRSSS *GT +D PT
Sbjct: 183 RSPRLARAKRRLCL*TRIDSSARCSSGATRSSSF*GTQTDCPT 55
>gb|CW083472.1|CW083472 104_425_10944264_114_32387_084 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10944264, DNA
sequence
Length = 629
Score = 107 bits (228), Expect(2) = 6e-045
Identities = 41/48 (85%), Positives = 44/48 (91%)
Frame = -3 / -3
Query: 409 GPQDWQGQKEGSACEQG*IHQQDVPQGRLGHHRAEEPQVIAQPEARSL 266
GPQDWQGQKEGSACEQG*IHQQDVPQGRLGHHR+EEP++IAQP L
Sbjct: 183 GPQDWQGQKEGSACEQG*IHQQDVPQGRLGHHRSEEPKLIAQPATLQL 40
Score = 101 bits (215), Expect(2) = 3e-039
Identities = 40/44 (90%), Positives = 42/44 (95%)
Frame = +3 / +2
Query: 279 SGWAITWGSSAR**PSRP*GTSC**IYPCSQAEPSFCPCQSWGP 410
+GWAI+ GSS R**PSRP*GTSC**IYPCSQAEPSFCPCQSWGP
Sbjct: 53 AGWAISLGSSER**PSRP*GTSC**IYPCSQAEPSFCPCQSWGP 184
Score = 97.3 bits (206), Expect(2) = 6e-038
Identities = 41/45 (91%), Positives = 42/45 (93%)
Frame = -1 / -1
Query: 408 VPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK*SPNRKP 274
VPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNP * PN+ P
Sbjct: 182 VPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPN*LPNQPP 48
Score = 95.0 bits (201), Expect(2) = 6e-045
Identities = 39/46 (84%), Positives = 41/46 (89%)
Frame = -1 / -1
Query: 543 LMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEV 406
L ++V QVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEV
Sbjct: 413 LKLTVS*CIQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEV 276
Score = 91.8 bits (194), Expect(2) = 2e-035
Identities = 39/43 (90%), Positives = 42/43 (97%)
Frame = +1 / +3
Query: 283 VGRSLGVPQHDDDRVAPEEHLADESILVHRQSLLFALASLGDL 411
VG+S+ VPQ+DDDRVAPEEHLADESILVHRQSLLFALASLGDL
Sbjct: 57 VGQSVWVPQNDDDRVAPEEHLADESILVHRQSLLFALASLGDL 185
Score = 90.4 bits (191), Expect(2) = 5e-030
Identities = 38/42 (90%), Positives = 39/42 (92%)
Frame = +2 / +1
Query: 284 LGDHLGFLSTMMTESPLRNILLMNLSLFTGRAFFLPLPVLGT 409
LG+ GFL TMMTESPLRNILLMNLSLFTGRAFFLPLPVLGT
Sbjct: 58 LGNQFGFLRTMMTESPLRNILLMNLSLFTGRAFFLPLPVLGT 183
Score = 81.7 bits (172), Expect(2) = 3e-039
Identities = 35/36 (97%), Positives = 35/36 (97%)
Frame = +2 / +1
Query: 407 TSVHISRTFSSTMLQWRSKARTRPSSFLLLRQLMRT 514
TSVHISRTFSSTMLQWRSKARTRPSSFLLLRQLM T
Sbjct: 277 TSVHISRTFSSTMLQWRSKARTRPSSFLLLRQLMST 384
Score = 81.7 bits (172), Expect(2) = 6e-038
Identities = 33/42 (78%), Positives = 35/42 (83%)
Frame = -3 / -3
Query: 532 C*EQHPGSHQLPQQQEAAWPGSCF*SPL*HGARERAGDVDRG 407
C + G+HQLPQQQE WPGS F*SPL*HGARERAGDVDRG
Sbjct: 402 CFLMYSGAHQLPQQQETTWPGSRF*SPL*HGARERAGDVDRG 277
Score = 79.0 bits (166), Expect(2) = 6e-023
Identities = 32/36 (88%), Positives = 33/36 (91%)
Frame = -2 / -2
Query: 515 RFSSIAATTRSCLAGFVLLIATVTWCSRTCGRCGQR 408
R SSIAATTR+ LAGF LLIATVTWCSRTCGRCGQR
Sbjct: 385 RCSSIAATTRNYLAGFALLIATVTWCSRTCGRCGQR 278
Score = 78.5 bits (165), Expect(2) = 2e-035
Identities = 33/42 (78%), Positives = 35/42 (83%)
Frame = +1 / +3
Query: 409 LCPHLPHVLEHHVTVAIKSTNPAKQLLVVAAIDENLGVVLNT 534
LCPHLPHVLEHHVTVAIKS NPAK LVVAAIDE+L N+
Sbjct: 279 LCPHLPHVLEHHVTVAIKSANPAK*FLVVAAIDEHLNTSGNS 404
Score = 62.0 bits (129), Expect(2) = 5e-030
Identities = 24/27 (88%), Positives = 24/27 (88%)
Frame = +3 / +2
Query: 408 PLSTSPARSRAPCYSGDQKHEPGQAAS 488
PLSTSPARSRAPCYSGDQK EPGQ S
Sbjct: 278 PLSTSPARSRAPCYSGDQKREPGQVVS 358
Score = 49.6 bits (102), Expect(2) = 6e-023
Identities = 26/43 (60%), Positives = 27/43 (62%)
Frame = -2 / -2
Query: 410 RSPXXXXXXXXXXXXXRIDSSARCSSGATRSSSC*GTPSDRPT 282
RSP RIDSSARCSSGATRSSS *GT +D PT
Sbjct: 184 RSPRLARAKRRLCL*TRIDSSARCSSGATRSSSF*GTQTDCPT 56
>gb|CW246898.1|CW246898 104_707_11221527_148_37606_052 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11221527, DNA
sequence
Length = 680
Score = 99.6 bits (211), Expect(2) = 1e-042
Identities = 38/48 (79%), Positives = 41/48 (85%)
Frame = -3 / +3
Query: 409 GPQDWQGQKEGSACEQG*IHQQDVPQGRLGHHRAEEPQVIAQPEARSL 266
GPQDWQGQKEGSACEQG*IHQQDVP GRLGHHR+EEP++ QP L
Sbjct: 522 GPQDWQGQKEGSACEQG*IHQQDVPXGRLGHHRSEEPKLNCQPATLQL 665
Score = 97.3 bits (206), Expect(2) = 6e-038
Identities = 38/44 (86%), Positives = 40/44 (90%)
Frame = +3 / -2
Query: 279 SGWAITWGSSAR**PSRP*GTSC**IYPCSQAEPSFCPCQSWGP 410
+GW + GSS R**PSRP*GTSC**IYPCSQAEPSFCPCQSWGP
Sbjct: 652 AGWQFSLGSSER**PSRP*GTSC**IYPCSQAEPSFCPCQSWGP 521
Score = 95.0 bits (201), Expect(2) = 1e-042
Identities = 39/46 (84%), Positives = 41/46 (89%)
Frame = -1 / +1
Query: 543 LMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEV 406
L ++V QVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEV
Sbjct: 292 LKLTVS*CIQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEV 429
Score = 90.9 bits (192), Expect(2) = 5e-036
Identities = 39/45 (86%), Positives = 40/45 (88%)
Frame = -1 / +1
Query: 408 VPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK*SPNRKP 274
VPKTGKGKKKALPVNKDRFISKMFL GDSVIIVLRNP * N+ P
Sbjct: 523 VPKTGKGKKKALPVNKDRFISKMFLXGDSVIIVLRNPN*IANQPP 657
Score = 87.2 bits (184), Expect(2) = 5e-034
Identities = 38/43 (88%), Positives = 40/43 (93%)
Frame = +1 / -3
Query: 283 VGRSLGVPQHDDDRVAPEEHLADESILVHRQSLLFALASLGDL 411
VG S+ VPQ+DDDRVA EEHLADESILVHRQSLLFALASLGDL
Sbjct: 648 VGNSVWVPQNDDDRVAXEEHLADESILVHRQSLLFALASLGDL 520
Score = 83.5 bits (176), Expect(2) = 5e-028
Identities = 36/42 (85%), Positives = 36/42 (85%)
Frame = +2 / -1
Query: 284 LGDHLGFLSTMMTESPLRNILLMNLSLFTGRAFFLPLPVLGT 409
L GFL TMMTESP RNILLMNLSLFTGRAFFLPLPVLGT
Sbjct: 647 LAIQFGFLRTMMTESPXRNILLMNLSLFTGRAFFLPLPVLGT 522
Score = 81.7 bits (172), Expect(2) = 5e-036
Identities = 33/42 (78%), Positives = 35/42 (83%)
Frame = -3 / +3
Query: 532 C*EQHPGSHQLPQQQEAAWPGSCF*SPL*HGARERAGDVDRG 407
C + G+HQLPQQQE WPGS F*SPL*HGARERAGDVDRG
Sbjct: 303 CFLMYSGAHQLPQQQETTWPGSRF*SPL*HGARERAGDVDRG 428
Score = 81.7 bits (172), Expect(2) = 6e-038
Identities = 35/36 (97%), Positives = 35/36 (97%)
Frame = +2 / -1
Query: 407 TSVHISRTFSSTMLQWRSKARTRPSSFLLLRQLMRT 514
TSVHISRTFSSTMLQWRSKARTRPSSFLLLRQLM T
Sbjct: 428 TSVHISRTFSSTMLQWRSKARTRPSSFLLLRQLMST 321
Score = 79.0 bits (166), Expect(2) = 1e-021
Identities = 32/36 (88%), Positives = 33/36 (91%)
Frame = -2 / +2
Query: 515 RFSSIAATTRSCLAGFVLLIATVTWCSRTCGRCGQR 408
R SSIAATTR+ LAGF LLIATVTWCSRTCGRCGQR
Sbjct: 320 RCSSIAATTRNYLAGFALLIATVTWCSRTCGRCGQR 427
Score = 78.5 bits (165), Expect(2) = 5e-034
Identities = 33/42 (78%), Positives = 35/42 (83%)
Frame = +1 / -3
Query: 409 LCPHLPHVLEHHVTVAIKSTNPAKQLLVVAAIDENLGVVLNT 534
LCPHLPHVLEHHVTVAIKS NPAK LVVAAIDE+L N+
Sbjct: 426 LCPHLPHVLEHHVTVAIKSANPAK*FLVVAAIDEHLNTSGNS 301
Score = 62.0 bits (129), Expect(2) = 5e-028
Identities = 24/27 (88%), Positives = 24/27 (88%)
Frame = +3 / -2
Query: 408 PLSTSPARSRAPCYSGDQKHEPGQAAS 488
PLSTSPARSRAPCYSGDQK EPGQ S
Sbjct: 427 PLSTSPARSRAPCYSGDQKREPGQVVS 347
Score = 45.1 bits (92), Expect(2) = 1e-021
Identities = 24/43 (55%), Positives = 26/43 (60%)
Frame = -2 / +2
Query: 410 RSPXXXXXXXXXXXXXRIDSSARCSSGATRSSSC*GTPSDRPT 282
RSP RIDSSARCSS ATRSSS *GT ++ PT
Sbjct: 521 RSPRLARAKRRLCL*TRIDSSARCSSXATRSSSF*GTQTELPT 649
>gb|CW246897.1|CW246897 104_707_11221527_148_35088_052 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11221527, DNA
sequence
Length = 738
Score = 96.8 bits (205), Expect(2) = 8e-042
Identities = 38/48 (79%), Positives = 39/48 (81%)
Frame = -3 / +1
Query: 409 GPQDWQGQKEGSACEQG*IHQQDVPQGRLGHHRAEEPQVIAQPEARSL 266
GPQDWQGQKEGSACEQG*IHQQDVP GRLGHHR+EE AQP L
Sbjct: 520 GPQDWQGQKEGSACEQG*IHQQDVPXGRLGHHRSEETPTDAQPSTLQL 663
Score = 95.0 bits (201), Expect(2) = 8e-042
Identities = 39/46 (84%), Positives = 41/46 (89%)
Frame = -1 / +2
Query: 543 LMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEV 406
L ++V QVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEV
Sbjct: 290 LKLTVS*CIQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEV 427
Score = 93.6 bits (198), Expect(3) = 9e-039
Identities = 38/43 (88%), Positives = 38/43 (88%)
Frame = +3 / -2
Query: 282 GWAITWGSSAR**PSRP*GTSC**IYPCSQAEPSFCPCQSWGP 410
GWA SS R**PSRP*GTSC**IYPCSQAEPSFCPCQSWGP
Sbjct: 647 GWASVGVSSER**PSRP*GTSC**IYPCSQAEPSFCPCQSWGP 519
Score = 89.0 bits (188), Expect(2) = 2e-035
Identities = 38/45 (84%), Positives = 39/45 (86%)
Frame = -1 / +2
Query: 408 VPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK*SPNRKP 274
VPKTGKGKKKALPVNKDRFISKMFL GDSVIIVLR P+ PN P
Sbjct: 521 VPKTGKGKKKALPVNKDRFISKMFLXGDSVIIVLRKPQLMPNPAP 655
Score = 88.1 bits (186), Expect(3) = 5e-036
Identities = 38/43 (88%), Positives = 39/43 (90%)
Frame = +1 / -3
Query: 283 VGRSLGVPQHDDDRVAPEEHLADESILVHRQSLLFALASLGDL 411
VG LG PQ+DDDRVA EEHLADESILVHRQSLLFALASLGDL
Sbjct: 646 VGHQLGFPQNDDDRVAXEEHLADESILVHRQSLLFALASLGDL 518
Score = 85.8 bits (181), Expect(2) = 1e-028
Identities = 38/45 (84%), Positives = 38/45 (84%)
Frame = +2 / -1
Query: 275 GFRLGDHLGFLSTMMTESPLRNILLMNLSLFTGRAFFLPLPVLGT 409
G LG GFL TMMTESP RNILLMNLSLFTGRAFFLPLPVLGT
Sbjct: 654 GAGLGISWGFLRTMMTESPXRNILLMNLSLFTGRAFFLPLPVLGT 520
Score = 81.7 bits (172), Expect(3) = 9e-039
Identities = 35/36 (97%), Positives = 35/36 (97%)
Frame = +2 / -1
Query: 407 TSVHISRTFSSTMLQWRSKARTRPSSFLLLRQLMRT 514
TSVHISRTFSSTMLQWRSKARTRPSSFLLLRQLM T
Sbjct: 426 TSVHISRTFSSTMLQWRSKARTRPSSFLLLRQLMST 319
Score = 81.7 bits (172), Expect(2) = 2e-035
Identities = 33/42 (78%), Positives = 35/42 (83%)
Frame = -3 / +1
Query: 532 C*EQHPGSHQLPQQQEAAWPGSCF*SPL*HGARERAGDVDRG 407
C + G+HQLPQQQE WPGS F*SPL*HGARERAGDVDRG
Sbjct: 301 CFLMYSGAHQLPQQQETTWPGSRF*SPL*HGARERAGDVDRG 426
Score = 79.0 bits (166), Expect(3) = 8e-023
Identities = 32/36 (88%), Positives = 33/36 (91%)
Frame = -2 / +3
Query: 515 RFSSIAATTRSCLAGFVLLIATVTWCSRTCGRCGQR 408
R SSIAATTR+ LAGF LLIATVTWCSRTCGRCGQR
Sbjct: 318 RCSSIAATTRNYLAGFALLIATVTWCSRTCGRCGQR 425
Score = 78.5 bits (165), Expect(3) = 5e-036
Identities = 33/42 (78%), Positives = 35/42 (83%)
Frame = +1 / -3
Query: 409 LCPHLPHVLEHHVTVAIKSTNPAKQLLVVAAIDENLGVVLNT 534
LCPHLPHVLEHHVTVAIKS NPAK LVVAAIDE+L N+
Sbjct: 424 LCPHLPHVLEHHVTVAIKSANPAK*FLVVAAIDEHLNTSGNS 299
Score = 62.0 bits (129), Expect(2) = 1e-028
Identities = 24/27 (88%), Positives = 24/27 (88%)
Frame = +3 / -2
Query: 408 PLSTSPARSRAPCYSGDQKHEPGQAAS 488
PLSTSPARSRAPCYSGDQK EPGQ S
Sbjct: 425 PLSTSPARSRAPCYSGDQKREPGQVVS 345
Score = 43.2 bits (88), Expect(3) = 8e-023
Identities = 24/43 (55%), Positives = 25/43 (58%)
Frame = -2 / +3
Query: 410 RSPXXXXXXXXXXXXXRIDSSARCSSGATRSSSC*GTPSDRPT 282
RSP RIDSSARCSS ATRSSS *G P+ PT
Sbjct: 519 RSPRLARAKRRLCL*TRIDSSARCSSXATRSSSF*GNPN*CPT 647
Score = 24.4 bits (47), Expect(3) = 9e-039
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +1 / -2
Query: 247 HKLQFSTET 273
HKLQFSTET
Sbjct: 719 HKLQFSTET 693
Score = 24.0 bits (46), Expect(3) = 5e-036
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = +3 / -1
Query: 228 NHPQHTS*ATVFNRDL 275
++P +*ATVFNRD+
Sbjct: 738 SYPPKHT*ATVFNRDI 691
Score = 23.5 bits (45), Expect(3) = 8e-023
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = -2 / +1
Query: 299 PSDRPTGSQVSVENCSL 249
P T + VSVENCSL
Sbjct: 667 PFSGVTEANVSVENCSL 717
>gb|CW102865.1|CW102865 104_471_11011572_116_34429_044 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11011572, DNA
sequence
Length = 705
Score = 91.8 bits (194), Expect(2) = 9e-039
Identities = 36/36 (100%), Positives = 36/36 (100%)
Frame = -1 / +3
Query: 513 VLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEV 406
VLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEV
Sbjct: 288 VLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEV 395
Score = 90.0 bits (190), Expect(2) = 9e-039
Identities = 38/40 (95%), Positives = 39/40 (97%)
Frame = -1 / +1
Query: 411 EVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK* 292
+VPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNP *
Sbjct: 481 QVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPN* 600
Score = 80.8 bits (170), Expect(2) = 2e-028
Identities = 34/37 (91%), Positives = 34/37 (91%)
Frame = +2 / -2
Query: 299 GFLSTMMTESPLRNILLMNLSLFTGRAFFLPLPVLGT 409
GFL TMMTESP RNILLMNLSLFTGRAFFLPLPV GT
Sbjct: 593 GFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGT 483
Score = 66.1 bits (138), Expect(2) = 2e-028
Identities = 30/36 (83%), Positives = 31/36 (86%)
Frame = +2 / -3
Query: 407 TSVHISRTFSSTMLQWRSKARTRPSSFLLLRQLMRT 514
TSVHIS TFS TMLQ RSKA TRPSSFLL RQL+RT
Sbjct: 394 TSVHISLTFSRTMLQCRSKALTRPSSFLLFRQLIRT 287
>gb|CW161652.1|CW161652 104_568_11150526_148_36435_021 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11150526, DNA
sequence
Length = 670
Score = 80.8 bits (170), Expect(2) = 3e-023
Identities = 34/40 (85%), Positives = 38/40 (95%)
Frame = -1 / +2
Query: 411 EVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK* 292
+VPKTGKGKK ALPVNKDRFISK+FLRG+ VIIVLR+PK*
Sbjct: 320 QVPKTGKGKKAALPVNKDRFISKIFLRGNRVIIVLRDPK* 439
Score = 48.7 bits (100), Expect(2) = 3e-023
Identities = 19/21 (90%), Positives = 19/21 (90%)
Frame = -1 / +1
Query: 480 LGRVRAFDRHCNMVLENVREM 418
LGRV AFDRHCNM LENVREM
Sbjct: 169 LGRVSAFDRHCNMFLENVREM 231
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 830,240,871
Number of Sequences: 832831
Number of extensions: 11879086
Number of successful extensions: 103999
Number of sequences better than 1.0e-020: 24
length of database: 163,786,556
effective HSP length: 54
effective length of database: 118,813,682
effective search space used: 20673580668
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)