TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 131555.2.1
(1236 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CN124163.1|CN124163 RHOH1_3_B09.b1_A002 Acid- and alkali... 221 e-100
gb|CN124236.1|CN124236 RHOH1_3_B09.g1_A002 Acid- and alkali... 246 1e-079
gb|CN125662.1|CN125662 RHOH1_12_B03.g1_A002 Acid- and alkal... 174 9e-079
gb|CN127950.1|CN127950 RHOH1_26_C10.b1_A002 Acid- and alkal... 221 3e-073
gb|CN125588.1|CN125588 RHOH1_12_B03.b1_A002 Acid- and alkal... 269 6e-071
gb|CX614598.1|CX614598 GABR1_15_C04.b1_A002 GA- or brassino... 261 1e-068
gb|CN146030.1|CN146030 WOUND1_37_A04.b1_A002 Wounded leaves... 256 4e-067
gb|CN132335.1|CN132335 OX1_5_C03.g1_A002 Oxidatively-stress... 148 1e-059
gb|BM324463.1|BM324463 PIC1_31_E07.b1_A002 Pathogen-infecte... 221 2e-056
gb|CF758652.1|CF758652 DSAF1_35_A01.g1_A011 Drought-stresse... 220 5e-056
gb|BG048617.1|BG048617 OV1_14_H08.b1_A002 Ovary 1 (OV1) Sor... 213 5e-054
gb|CN135147.1|CN135147 OX1_30_G11.g1_A002 Oxidatively-stres... 155 2e-051
gb|CW338277.1|CW338277 104_838_11484658_116_36129_039 Sorgh... 166 1e-050
gb|CD213624.1|CD213624 HS1_52_G04.b1_A012 Heat-shocked seed... 201 2e-050
gb|CW316181.1|CW316181 104_807_11472758_116_35843_055 Sorgh... 164 6e-050
gb|CN145669.1|CN145669 WOUND1_34_B03.g1_A002 Wounded leaves... 181 8e-050
gb|CW181597.1|CW181597 104_596_11163596_148_36653_070 Sorgh... 87 1e-048
gb|AW922257.1|AW922257 DG1_17_G01.b1_A002 Dark Grown 1 (DG1... 109 2e-048
gb|CW031414.1|CW031414 104_260_10500796_114_30365 Sorghum m... 87 7e-048
gb|CN132257.1|CN132257 OX1_5_C03.b1_A002 Oxidatively-stress... 115 2e-047
gb|CN128033.1|CN128033 RHOH1_26_C10.g1_A002 Acid- and alkal... 191 2e-047
gb|BE360688.1|BE360688 DG1_66_C04.b2_A002 Dark Grown 1 (DG1... 104 3e-046
gb|CD431095.1|CD431095 ETH1_6_A10.g1_A002 Ethylene-treated ... 102 9e-045
gb|CW203138.1|CW203138 104_629_11185470_116_36913_021 Sorgh... 177 4e-043
gb|CF429087.1|CF429087 PH1_19_G12.g1_A002 Phosphorous-defic... 88 3e-041
gb|CW269378.1|CW269378 104_740_11401813_116_36229_055 Sorgh... 97 1e-040
gb|BG240109.1|BG240109 OV1_18_A05.b1_A002 Ovary 1 (OV1) Sor... 129 2e-040
gb|BE359158.1|BE359158 DG1_39_C02.b1_A002 Dark Grown 1 (DG1... 139 3e-040
gb|CD206423.1|CD206423 HS1_22_G03.g1_A012 Heat-shocked seed... 139 3e-040
gb|BM330954.1|BM330954 PIC1_67_F03.g1_A002 Pathogen-infecte... 166 5e-040
gb|CW183575.1|CW183575 104_599_11164688_148_36677_024 Sorgh... 97 9e-040
gb|BE125424.1|BE125424 DG1_25_G01.b1_A002 Dark Grown 1 (DG1... 88 5e-039
gb|CX607102.1|CX607102 ANR1_6_E09.g1_A002 Anaerobic roots S... 88 7e-039
gb|CB925645.1|CB925645 ABA1_22_G02.g1_A012 Abscisic acid-tr... 144 9e-039
gb|CW332608.1|CW332608 104_830_11481507_116_36036_010 Sorgh... 96 3e-038
emb|AX512962.1| Sequence 7 from Patent WO02063021 119 3e-038
gb|CN152656.1|CN152656 WOUND1_83_A06.g1_A002 Wounded leaves... 105 4e-038
gb|BE363053.1|BE363053 DG1_9_D02.b1_A002 Dark Grown 1 (DG1)... 131 6e-038
gb|CF432928.1|CF432928 NIT1_19_B11.g1_A002 Nitrogen-deficie... 88 6e-038
gb|CF756225.1|CF756225 DSAF1_4_G03.b1_A011 Drought-stressed... 105 2e-037
gb|CB925802.1|CB925802 ABA1_23_F05.g1_A012 Abscisic acid-tr... 105 2e-037
gb|CX614668.1|CX614668 GABR1_15_C04.g1_A002 GA- or brassino... 132 4e-037
gb|CF428334.1|CF428334 PH1_14_C04.g1_A002 Phosphorous-defic... 105 1e-036
gb|CL161050.1|CL161050 104_352_10805442_116_31827_114 Sorgh... 92 1e-036
gb|CW494628.1|CW494628 fsbb001f286a06f0 Sorghum methylation... 92 1e-036
gb|CL178820.1|CL178820 104_387_10894861_116_31906_157 Sorgh... 89 2e-035
gb|CW192819.1|CW192819 104_615_11179234_148_36775_041 Sorgh... 89 2e-035
gb|BE357273.1|BE357273 DG1_148_D02.b1_A002 Dark Grown 1 (DG... 122 8e-035
gb|BM324287.1|BM324287 PIC1_26_E07.b1_A002 Pathogen-infecte... 130 8e-034
gb|CW261808.1|CW261808 104_729_11229713_148_35203_077 Sorgh... 83 4e-033
gb|CN147237.1|CN147237 WOUND1_48_B05.g1_A002 Wounded leaves... 105 8e-033
gb|CW065144.1|CW065144 104_311_10522975_114_30118 Sorghum m... 97 9e-033
gb|CN138545.1|CN138545 OX1_64_A03.g1_A002 Oxidatively-stres... 99 2e-032
gb|BZ780254.1|BZ780254 ii38c12.g1 WGS-SbicolorF (DH5a methy... 95 5e-032
gb|CW305139.1|CW305139 104_790_11466160_116_37435_058 Sorgh... 97 6e-032
gb|CF482349.1|CF482349 POL1_6_A05.g1_A002 Pollen Sorghum bi... 105 1e-031
gb|BE357345.1|BE357345 DG1_148_D02.g1_A002 Dark Grown 1 (DG... 88 1e-031
gb|BM328785.1|BM328785 PIC1_26_E07.g1_A002 Pathogen-infecte... 78 1e-031
gb|CW346174.1|CW346174 104_849_11488883_148_36218_040 Sorgh... 57 2e-031
gb|CL178474.1|CL178474 104_386_10894614_116_31912_294 Sorgh... 73 2e-031
gb|CL183456.1|CL183456 104_396_10898188_114_31923_028 Sorgh... 95 3e-031
gb|BE363139.1|BE363139 DG1_9_D02.g1_A002 Dark Grown 1 (DG1)... 83 4e-031
gb|CW266538.1|CW266538 104_736_11232481_148_35285_009 Sorgh... 85 6e-031
gb|CW317382.1|CW317382 104_809_11473385_148_35865_077 Sorgh... 63 7e-031
gb|CD213720.1|CD213720 HS1_52_G04.g1_A012 Heat-shocked seed... 81 2e-030
gb|CW098262.1|CW098262 104_464_11002911_116_34360_052 Sorgh... 85 2e-030
gb|CW180919.1|CW180919 104_595_11163212_148_36646_070 Sorgh... 73 2e-030
gb|CL173566.1|CL173566 104_377_10890963_116_31793_099 Sorgh... 85 2e-030
gb|CW338278.1|CW338278 104_838_11484658_148_36128_039 Sorgh... 97 7e-030
gb|CW442746.1|CW442746 fsbb001f162i18k0 Sorghum methylation... 84 1e-029
gb|CD213428.1|CD213428 HS1_40_A07.g1_A012 Heat-shocked seed... 99 1e-029
gb|BI211450.1|BI211450 IP1_60_H10.b1_A002 Immature pannicle... 125 2e-029
gb|BI351580.1|BI351580 IP1_72_F10.b1_A002 Immature pannicle... 125 3e-029
gb|CW332609.1|CW332609 104_830_11481507_148_36035_010 Sorgh... 85 5e-029
gb|CN138728.1|CN138728 OX1_13_C08.g1_A002 Oxidatively-stres... 50 1e-028
gb|AF010283.1| Sorghum bicolor ADP-glucose pyrophosphorylas... 55 2e-028
gb|CW065681.1|CW065681 104_312_10523281_114_30128 Sorghum m... 87 3e-028
gb|CW299315.1|CW299315 104_782_11463048_116_36235_092 Sorgh... 87 3e-028
gb|CF480908.1|CF480908 POL1_68_F11.g1_A002 Pollen Sorghum b... 86 3e-028
gb|CW482651.1|CW482651 fsbb001f242n16k0 Sorghum methylation... 87 3e-028
gb|CL161049.1|CL161049 104_352_10805442_114_31826_114 Sorgh... 87 4e-028
gb|CL183457.1|CL183457 104_396_10898188_116_31924_028 Sorgh... 87 4e-028
gb|CB926819.1|CB926819 ABA1_10_G05.g1_A012 Abscisic acid-tr... 108 4e-028
gb|CN129279.1|CN129279 RHOH1_34_B10.g1_A002 Acid- and alkal... 99 9e-028
gb|CN137521.1|CN137521 OX1_57_G07.g1_A002 Oxidatively-stres... 99 9e-028
gb|BI141055.1|BI141055 IP1_42_E11.b1_A002 Immature pannicle... 126 9e-028
gb|CF756413.1|CF756413 DSAF1_5_H08.b1_A011 Drought-stressed... 73 1e-027
gb|AW671852.1|AW671852 LG1_352_C05.b1_A002 Light Grown 1 (L... 98 3e-027
gb|CD225698.1|CD225698 CCC1_41_H04.b1_A007 Callus culture/c... 110 4e-027
gb|BM317843.1|BM317843 OV1_16_B11.b9_A002 Ovary 1 (OV1) Sor... 54 7e-027
gb|CW217859.1|CW217859 104_651_11195875_148_37457_076 Sorgh... 73 1e-026
gb|CD231600.1|CD231600 SS1_22_F09.g1_A012 Salt-stressed see... 99 8e-026
gb|CN137640.1|CN137640 OX1_58_D03.g1_A002 Oxidatively-stres... 99 8e-026
gb|CX610621.1|CX610621 ANR1_19_G06.g1_A002 Anaerobic roots ... 99 8e-026
gb|CW221907.1|CW221907 104_657_11202096_116_37451_094 Sorgh... 62 9e-026
gb|CW150814.1|CW150814 104_551_11143612_116_36314_010 Sorgh... 62 2e-025
gb|CF428323.1|CF428323 PH1_14_C04.b1_A002 Phosphorous-defic... 61 2e-025
gb|CW320108.1|CW320108 104_813_11474839_148_35894_032 Sorgh... 117 3e-025
gb|CW287591.1|CW287591 104_765_11411495_148_35525_084 Sorgh... 71 4e-025
gb|CW121998.1|CW121998 104_500_11110302_116_34668_025 Sorgh... 84 4e-025
gb|BZ347040.1|BZ347040 hw04e11.b1 WGS-SbicolorF (JM107 adap... 68 4e-025
gb|CX608316.1|CX608316 ANR1_37_H09.g1_A002 Anaerobic roots ... 94 2e-024
gb|CW247120.1|CW247120 104_708_11221624_148_36079_064 Sorgh... 70 2e-024
gb|BZ349735.1|BZ349735 hr45b01.g1 WGS-SbicolorF (JM107 adap... 81 2e-024
gb|BE362142.1|BE362142 DG1_84_C11.g1_A002 Dark Grown 1 (DG1... 70 3e-024
gb|CF756307.1|CF756307 DSAF1_4_G03.g1_A011 Drought-stressed... 60 3e-024
gb|CW168296.1|CW168296 104_577_11154068_148_36493_066 Sorgh... 81 3e-024
gb|CB925013.1|CB925013 ABA1_29_B06.g1_A012 Abscisic acid-tr... 84 7e-024
gb|CF428507.1|CF428507 PH1_15_D07.g1_A002 Phosphorous-defic... 84 7e-024
gb|CN138460.1|CN138460 OX1_64_A03.b1_A002 Oxidatively-stres... 68 9e-024
gb|CD225805.1|CD225805 CCC1_41_H04.g1_A007 Callus culture/c... 57 9e-024
gb|CW254776.1|CW254776 104_719_11225861_148_35126_029 Sorgh... 73 1e-023
gb|CW032378.1|CW032378 104_261_10501343_115_30364 Sorghum m... 95 3e-023
gb|CW390379.1|CW390379 fsbb001f076a05k0 Sorghum methylation... 62 4e-023
gb|CW339530.1|CW339530 104_840_11485320_116_36141_092 Sorgh... 110 4e-023
gb|CW442745.1|CW442745 fsbb001f162i18f0 Sorghum methylation... 62 5e-023
gb|BM323476.1|BM323476 PIC1_19_G04.b1_A002 Pathogen-infecte... 57 6e-023
gb|CW148381.1|CW148381 104_547_11141925_148_35008_095 Sorgh... 58 1e-022
gb|CW403429.1|CW403429 fsbb001f095c10f0 Sorghum methylation... 74 1e-022
gb|CW192938.1|CW192938 104_615_11179297_116_36769_005 Sorgh... 79 3e-022
gb|CW403430.1|CW403430 fsbb001f095c10k0 Sorghum methylation... 79 3e-022
gb|CL701845.2|CL701845 SP__Ba0078E02.f SP__Ba Sorghum propi... 107 3e-022
gb|CW304703.1|CW304703 104_789_11465922_116_35702_067 Sorgh... 84 3e-022
gb|CB927150.1|CB927150 ABA1_13_F08.g1_A012 Abscisic acid-tr... 86 4e-022
gb|CD228254.1|CD228254 CCC1_6_B12.g1_A007 Callus culture/ce... 88 5e-022
gb|CN129192.1|CN129192 RHOH1_34_B10.b3_A002 Acid- and alkal... 70 7e-022
gb|BE362152.1|BE362152 DG1_84_D11.g1_A002 Dark Grown 1 (DG1... 70 7e-022
gb|CW181342.1|CW181342 104_596_11163456_116_36654_092 Sorgh... 69 7e-022
gb|CW185694.1|CW185694 104_603_11166185_148_36702_073 Sorgh... 69 7e-022
gb|BZ349552.1|BZ349552 hr42b05.g1 WGS-SbicolorF (JM107 adap... 93 8e-022
gb|CW250340.1|CW250340 104_712_11223336_148_35055_088 Sorgh... 81 1e-021
gb|CW480229.1|CW480229 fsbb001f239d02f0 Sorghum methylation... 57 1e-021
gb|CW183574.1|CW183574 104_599_11164688_116_36678_024 Sorgh... 101 1e-021
gb|CW482650.1|CW482650 fsbb001f242n16f0 Sorghum methylation... 62 2e-021
gb|BG946962.1|BG946962 IP1_1_H02.b1_A002 Immature pannicle ... 100 3e-021
gb|BE592843.1|BE592843 WS1_91_B04.b1_A002 Water-stressed 1 ... 79 3e-021
gb|CW180918.1|CW180918 104_595_11163212_116_36642_070 Sorgh... 61 3e-021
gb|CW470814.1|CW470814 fsbb001f224d21k0 Sorghum methylation... 73 3e-021
gb|CW340854.1|CW340854 104_842_11486016_116_36172_096 Sorgh... 80 4e-021
gb|CD430564.1|CD430564 ETH1_19_A12.g1_A002 Ethylene-treated... 88 4e-021
gb|CW340855.1|CW340855 104_842_11486016_148_36171_096 Sorgh... 80 4e-021
gb|CW100055.1|CW100055 104_467_11003894_116_34391_059 Sorgh... 104 4e-021
gb|BM328946.1|BM328946 PIC1_31_E07.g1_A002 Pathogen-infecte... 104 4e-021
gb|CW090504.1|CW090504 104_436_10949318_116_32611_057 Sorgh... 72 4e-021
gb|CW442451.1|CW442451 fsbb001f162c02k0 Sorghum methylation... 73 4e-021
gb|CF485803.1|CF485803 POL1_33_F08.g1_A002 Pollen Sorghum b... 72 5e-021
gb|CD206390.1|CD206390 HS1_22_H01.g1_A012 Heat-shocked seed... 75 5e-021
gb|CW357175.1|CW357175 fsbb001f023k20f0 Sorghum methylation... 68 5e-021
>gb|CN124163.1|CN124163 RHOH1_3_B09.b1_A002 Acid- and alkaline-treated roots Sorghum bicolor
cDNA clone RHOH1_3_B09_A002 3', mRNA sequence
Length = 695
Score = 221 bits (478), Expect(2) = e-100
Identities = 91/112 (81%), Positives = 102/112 (91%)
Frame = +2 / +1
Query: 692 DLETVENVLSNMVDIRDVADALLLTYEKPEASGRYICSSHAIKISDMINILKTMYPSYPY 871
D ET+EN L N+VD+RDVADALLL YEKPEASGRYICSS IK+SDMINILKT+YP+YPY
Sbjct: 250 DRETIENRLRNIVDVRDVADALLLAYEKPEASGRYICSSQPIKVSDMINILKTLYPTYPY 429
Query: 872 PKNFVEDDVNSVYSSEKLQKLGWTFKPIEESLRDTVESYKAFGILN*TSN*D 1027
PKNFVE D NS+YSSEKLQKLGWTF+PIEE+LR++VESYKAFGILN* SN D
Sbjct: 430 PKNFVEMDDNSIYSSEKLQKLGWTFRPIEETLRESVESYKAFGILN*ASNWD 585
Score = 185 bits (399), Expect(2) = 3e-069
Identities = 82/113 (72%), Positives = 89/113 (78%)
Frame = -3 / -3
Query: 1030 TVLVGCSIQDAKCLVGFNSVTEGFLYRLEGPPQLLQFLRAVYRVDIIFHKIFGIRVRRIH 851
TV VG SIQDAKC VGFN+ EG LYR EGPP LL+FLR VY V I FHK+FGIRV I
Sbjct: 588 TVPVGRSIQDAKCFVGFNTFAEGLLYRPEGPP*LLKFLRTVYGVVIHFHKVFGIRVSWI* 409
Query: 850 GLQYVYHIRNFYCM*TADVSSRRFWLFVSQKKSISNITNIHHITEYIFNSLEI 692
L YVYHIRNFY +* ADVSSRRFW F+ QKKSISNITNIH+I+E IFN L I
Sbjct: 408 SL*YVYHIRNFYWL*AADVSSRRFWFFICQKKSISNITNIHNISESIFNGLTI 250
Score = 166 bits (357), Expect(2) = e-100
Identities = 61/82 (74%), Positives = 73/82 (89%)
Frame = +2 / +1
Query: 446 VYANPIYPKGKVFDEDCWSDEDYCRKKEDWYLVSKTLSEREALAFAAKTGLDVVTVCPSL 625
+++NP +PKGK FDEDCWSDEDYCRK EDWY +SKTLSEREA A+AAKTGLDVVT+CP+L
Sbjct: 1 IFSNPYWPKGKAFDEDCWSDEDYCRKNEDWYYLSKTLSEREAFAYAAKTGLDVVTICPAL 180
Query: 626 VFGPLMQPTVNLSSEMILKYFK 691
VFGPLMQ +N SS+++L YFK
Sbjct: 181 VFGPLMQSILNASSKILLNYFK 246
Score = 154 bits (330), Expect(2) = 6e-060
Identities = 75/114 (65%), Positives = 83/114 (72%)
Frame = +3 / +2
Query: 690 KISRLLKMYSVIWWIFVXXXXXXXXXTKSQKRLDDTSAVHMQ*KFLI**TY*RPCIRLTL 869
+I R LK+ S I W+FV K+QKRLDDTSA H Q*KFLI**TY*R I+LTL
Sbjct: 248 EIVRPLKIDSEILWMFVMLLMLFFWHMKNQKRLDDTSAAHNQ*KFLI**TY*RLYIQLTL 427
Query: 870 IPKILWKMMSTLYTALRNCRSWGGPSSL*RNPSVTLLNPTRHLAS*IEHPTRTV 1031
IPK LWK M+T YT LRN RS GGPS L*R PS +LNPT+HLAS*IE PT TV
Sbjct: 428 IPKTLWKWMTTPYTVLRNFRS*GGPSGL*RRPSAKVLNPTKHLAS*IERPTGTV 589
Score = 145 bits (312), Expect(2) = 9e-052
Identities = 73/133 (54%), Positives = 81/133 (60%)
Frame = -1 / -1
Query: 1089 LLFNCAYIIQEEFGGNSRWKQS*LDVQFRMPNAL*DSTVSRRDSSIGLKVHPSFCXXXXX 910
+L +C + ++ + S LD QFRMPNAL*DST+SRR SSIGLKVHPSF
Sbjct: 647 VLVHCLHEPDRDWTVGTAVSLSQLDAQFRMPNAL*DSTLSRRVSSIGLKVHPSF*SFSEL 468
Query: 909 XXXXXXXXTKFLG*G*DGYMVFSMFIISEIFIACELQMYRPDASGFXXXXXXXXXXXXXX 730
TKFLG*G* GY VF+MFIISE FI CELQMYRPDASGF
Sbjct: 467 YMELSSISTKFLG*G*VGYKVFNMFIISETFIGCELQMYRPDASGFSYARRRASATSRTS 288
Query: 729 XILLSTFSTVSRS 691
I LS FS VSRS
Sbjct: 287 TIFLSLFSMVSRS 249
Score = 145 bits (311), Expect(2) = 4e-056
Identities = 62/85 (72%), Positives = 68/85 (80%)
Frame = +1 / +3
Query: 772 KARSVWTIHLQFTCNKNF*YDKHTEDHVSVLPLSQKFCGR*CQLCIQL*ETAEAGVDLQA 951
K RSVWTIHLQ T NK+F*YDKH +D +S LPLSQK CG QL IQ *ET+EA VDLQA
Sbjct: 330 KTRSVWTIHLQLTTNKSF*YDKHIKDFISNLPLSQKLCGNG*QLHIQF*ETSEARVDLQA 509
Query: 952 YRGIPP*HC*ILQGIWHPELNIQLG 1026
YRG PP C*ILQ IWHPEL++QLG
Sbjct: 510 YRGDPPRKC*ILQSIWHPELSVQLG 584
Score = 143 bits (307), Expect(2) = 1e-049
Identities = 61/85 (71%), Positives = 65/85 (76%)
Frame = -2 / -2
Query: 1025 PSWMFNSGCQMPCRIQQCHGGIPL*A*RSTPASAVSQSCIQS*HHLPQNFWDKGKTDTWS 846
PSW NSGCQM CRIQ GG PL*A*RST AS VSQ+CI S H PQ+FWDKGK D S
Sbjct: 583 PSWTLNSGCQMLCRIQHFRGGSPL*A*RSTLASEVSQNCIWSCHPFPQSFWDKGKLDIKS 404
Query: 845 SVCLSYQKFLLHVNCRCIVQTLLAF 771
+CLSYQK LL V+CRCIVQTLL F
Sbjct: 403 LICLSYQKLLLVVSCRCIVQTLLVF 329
Score = 99.6 bits (211), Expect(2) = 6e-060
Identities = 49/77 (63%), Positives = 54/77 (70%)
Frame = +1 / +3
Query: 463 LSEG*GV**RLLVR*GLLQEEGGLVFSFQNTVGTRSSCFCSKNRAGRCNCLSVISIWTLD 642
L+ G G+**RLLVR*GLLQEE GLV FQN+V T C CSKN G CN L + IWTLD
Sbjct: 18 LA*GQGL**RLLVR*GLLQEE*GLVLPFQNSVRT*GFCLCSKNGVGCCNYLPGLGIWTLD 197
Query: 643 AAYSKFEQRNDP*IFQR 693
A Y K E N P*+FQR
Sbjct: 198 AVYIKCE**NTP*LFQR 248
Score = 99.1 bits (210), Expect(2) = 3e-069
Identities = 48/74 (64%), Positives = 52/74 (70%)
Frame = -2 / -2
Query: 692 L*NI*GSFRCSNLL*AASRVQILMTDKQLQRPALFLLQKQELLVPTVFWKLNTNPPSSCS 513
L*N *G F S+L+* ASRVQI K LQ P FLL KQ+ V T FWK NTNP SSCS
Sbjct: 247 L*NS*GVFYYSHLI*TASRVQIPRPGK*LQHPTPFLLHKQKPHVRTEFWKGNTNPHSSCS 68
Query: 512 NPHLTSSLHQTPYP 471
NPHLT+SLHQ P P
Sbjct: 67 NPHLTNSLHQRPCP 26
Score = 95.5 bits (202), Expect(2) = 4e-056
Identities = 46/74 (62%), Positives = 50/74 (67%)
Frame = +3 / +2
Query: 471 RVRCLMKTAGQMRITAXXXXXXXXFPKHCRNEKLLLLQQKQGWTL*LFVRH*YLDP*CSL 650
R R LMKT GQMRITA FPK C N +LLL+QQK+GW L*LF R YLDP*CSL
Sbjct: 26 RARPLMKTVGQMRITAGRMRIGITFPKLCPNVRLLLMQQKRGWML*LFARPWYLDP*CSL 205
Query: 651 Q*I*AAK*SLNISK 692
*+ K SL ISK
Sbjct: 206 Y*MRVVKYSLTISK 247
Score = 80.3 bits (169), Expect(2) = 9e-052
Identities = 42/79 (53%), Positives = 45/79 (56%)
Frame = -1 / -1
Query: 690 LKYLRIISLLKFTVGCIKGPNTNDGQTVTTSSPVFAAKARASRSDSVLETKYXXXXXXXX 511
LK LR I LL F + CIKGPNT GQ VTTS+PVFAA A+ASRSD VLE Y
Sbjct: 245 LK*LRSILLLAFNIDCIKGPNTKAGQIVTTSNPVFAA*AKASRSDRVLER*YQSSFFLQ* 66
Query: 510 XXXXXXXXSNTLPFG*IGL 454
S LP G GL
Sbjct: 65 SSSDQQSSSKALPLGQ*GL 9
Score = 75.8 bits (159), Expect(2) = 1e-049
Identities = 31/49 (63%), Positives = 36/49 (73%)
Frame = -3 / -3
Query: 691 FEIFKDHFAAQIYCRLHQGSKY**RTNSYNVQPCFCCKSKSFSFRQCFG 545
FEI K++F +I RLHQGSKY R NSYN+QP FCC SKS +F Q FG
Sbjct: 246 FEIVKEYFTTRI*YRLHQGSKYQGRANSYNIQPRFCCISKSLTFGQSFG 100
>gb|CN124236.1|CN124236 RHOH1_3_B09.g1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_3_B09_A002 5', mRNA sequence
Length = 566
Score = 246 bits (531), Expect(2) = 1e-079
Identities = 106/127 (83%), Positives = 111/127 (87%)
Frame = +2 / +1
Query: 41 KPKTMDPVRKSVCVTGAGGFVASELVKLLLSRGQYAVRGTVRDPGASKNAHLKVLEGAEE 220
KPK M KSVCVTGAGGF+AS LVKLLLSRGQY VRGTVRDPGASKNAHLK LEGA E
Sbjct: 88 KPKEMAAAAKSVCVTGAGGFIASWLVKLLLSRGQYTVRGTVRDPGASKNAHLKALEGAME 267
Query: 221 RLQLLKADLMDYDSIASAVAGCEGVFHVASPVLSHRPSNPEVEVIAPAVTGTTNVLKACY 400
RLQLLK DL+DY S+ASA+AGCEGVFHVASPV S R SNPEVEVI PAV GTTNVLKACY
Sbjct: 268 RLQLLKVDLLDYSSVASAIAGCEGVFHVASPVPSGRSSNPEVEVIGPAVLGTTNVLKACY 447
Query: 401 EAKVRRV 421
EAKV+RV
Sbjct: 448 EAKVKRV 468
Score = 234 bits (506), Expect(3) = 8e-068
Identities = 107/134 (79%), Positives = 109/134 (81%)
Frame = -1 / -1
Query: 420 TRLTFAS*QAFNTLVVPVTAGAMTSTSGLEGRWERTGLATWKTPSQPATADAMLS*SIRS 241
TRLTFAS*QAFNTLVVP TAG MTSTSGLE R E TGLATWKTPSQPA ADA L *S +S
Sbjct: 467 TRLTFAS*QAFNTLVVPNTAGPMTSTSGLEDRPEGTGLATWKTPSQPAIADATLL*SNKS 288
Query: 240 ALRSCNLSSAPSSTLRWAFLLAPGSRTVPRTAYWPRERRSFTSSDATKPPAPVTHTLFRT 61
LRSCNLS APSS LR AFLLAPGSRTVPRT YWPRERRSFTS DA KPPAPVTHTLF
Sbjct: 287 TLRSCNLSIAPSSALR*AFLLAPGSRTVPRTVYWPRERRSFTSHDAMKPPAPVTHTLFAA 108
Query: 60 GSIVFGLNTLRCSR 19
+I FGL R R
Sbjct: 107 AAISFGLALPRKKR 66
Score = 219 bits (473), Expect = 6e-056
Identities = 95/123 (77%), Positives = 103/123 (83%)
Frame = -3 / -3
Query: 409 FCLIASL*HIGCTCYSGSYDLHLRVGGSMGKDRASYMEDTLTAGNC*CNAVVVHQISLEK 230
FCLIASL*HIGC+ YS +YDLHLRVGG G++R SYMEDTLTAGNC*CN VV QI+L+K
Sbjct: 456 FCLIASL*HIGCS*YSRTYDLHLRVGGPTGRNRTSYMEDTLTAGNC*CNTAVVQQINLKK 277
Query: 229 LQPFLSSFQHLEMGILASTRVAHGAADRVLAPGEEELHQLRRDEAASAGHAHALPHRIHC 50
LQPF SSFQ LEM ILASTRVAHGAADRVLA GEEELH+ RRDEAA AGHA+AL R H
Sbjct: 276 LQPFHSSFQRLEMSILASTRVAHGAADRVLATGEEELHEPRRDEAARAGHAYALRRRRHF 97
Query: 49 FRF 41
F
Sbjct: 96 LWF 88
Score = 171 bits (367), Expect = 3e-041
Identities = 70/84 (83%), Positives = 76/84 (90%)
Frame = -2 / -2
Query: 422 QLA*LLPHSKPLTHWLYLLQREL*PPPQGWRVDGKGQG*LHGRHPHSRQLLMQCCRSPSD 243
QLA*LLPHSKPLTHWL+L+Q++L*PPPQGWR D K Q *LHGRHPHSRQLLMQ C SP++
Sbjct: 469 QLA*LLPHSKPLTHWLFLIQQDL*PPPQGWRTDRKEQD*LHGRHPHSRQLLMQHCCSPTN 290
Query: 242 QP*EAATFPQLLPAP*DGHSC*HQ 171
QP*EAATFP LLPAP*D HSC*HQ
Sbjct: 289 QP*EAATFP*LLPAP*DEHSC*HQ 218
Score = 167 bits (359), Expect(2) = 1e-047
Identities = 76/94 (80%), Positives = 78/94 (82%)
Frame = +3 / +2
Query: 141 NTRSAAPCATLVLARMPISRCWKELRKGCSFSRLI*WTTTALHQQLPAVRVSSM*LALSF 320
NTRSAAPCATLVLARM ISR WKEL KGCSF RLI WTT LHQQLPAVRVSSM*L L
Sbjct: 188 NTRSAAPCATLVLARMLISRRWKELWKGCSFLRLICWTTAVLHQQLPAVRVSSM*LVLFL 367
Query: 321 PIDPPTLRWRS*LPL*QVQPMC*RLAMRQKLGEL 422
P+ PPTLRWRS*+ L QPMC*RLAMRQKL EL
Sbjct: 368 PVGPPTLRWRS*VLLY*EQPMC*RLAMRQKLSEL 469
Score = 111 bits (236), Expect(3) = 2e-039
Identities = 50/76 (65%), Positives = 52/76 (68%)
Frame = +1 / +3
Query: 43 TENNGSGAEEXXXXXXXXXXXVGAGEAPPLPGPIRGPRHRARPWC*QECPSQGAGRS*GK 222
T+ NG G EE V A EAPPLP PI GPRHRARPWC*QEC SQGAGRS GK
Sbjct: 90 TKGNGGGGEERMRDRRGRLHRVVAREAPPLPWPIHGPRHRARPWC*QECSSQGAGRSYGK 269
Query: 223 VAASQG*SDGLRQHCI 270
VAAS G* GL+Q CI
Sbjct: 270 VAAS*G*FVGLQQCCI 317
Score = 73.0 bits (153), Expect(2) = 1e-079
Identities = 25/37 (67%), Positives = 31/37 (83%)
Frame = +2 / +2
Query: 407 KVRRVVVVSSCGAVYANPIYPKGKVFDEDCWSDEDYC 517
K+ +VVVSS A+++NP +PKGK FDEDCWSDEDYC
Sbjct: 455 KLSELVVVSSVAAIFSNPYWPKGKAFDEDCWSDEDYC 565
Score = 57.9 bits (120), Expect(3) = 2e-039
Identities = 26/30 (86%), Positives = 26/30 (86%)
Frame = +1 / +3
Query: 331 LQP*GGGHSSRCNRYNQCVKGLL*GKS*AS 420
LQP*GGGH S C R NQCVKGLL*GKS*AS
Sbjct: 378 LQP*GGGHRSCCIRNNQCVKGLL*GKS*AS 467
Score = 45.1 bits (92), Expect(2) = 1e-047
Identities = 19/32 (59%), Positives = 22/32 (68%)
Frame = +3 / +3
Query: 423 WWCLHVELCMLILFIRRVRCLMKTAGQMRITA 518
WWCL ++L + L R R LMKT GQMRITA
Sbjct: 471 WWCLLLQLYSVTLTGLRARPLMKTVGQMRITA 566
Score = 37.7 bits (76), Expect(3) = 8e-068
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = -2 / -1
Query: 518 CSNPHLTSSLHQTPYP 471
CSNPHLT+SLHQ P P
Sbjct: 566 CSNPHLTNSLHQRPCP 519
Score = 34.5 bits (69), Expect(3) = 2e-039
Identities = 20/31 (64%), Positives = 23/31 (74%)
Frame = +1 / +1
Query: 424 GGVFMWSCVC*SYLSEG*GV**RLLVR*GLL 516
GGVF S + * L+ G G+**RLLVR*GLL
Sbjct: 472 GGVFCCSYIQ*PLLA*GQGL**RLLVR*GLL 564
Score = 26.3 bits (51), Expect(3) = 8e-068
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = -1 / -3
Query: 477 LPFG*IGLAYTAPHEDTTTTRLTF 406
LP G GL A EDTTT L F
Sbjct: 525 LPLGQ*GLLNIAATEDTTTNSLNF 454
>gb|CN125662.1|CN125662 RHOH1_12_B03.g1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_12_B03_A002 5', mRNA sequence
Length = 688
Score = 174 bits (374), Expect(2) = 9e-079
Identities = 72/115 (62%), Positives = 90/115 (78%)
Frame = +2 / +3
Query: 335 NPEVEVIAPAVTGTTNVLKACYEAKVRRVVVVSSCGAVYANPIYPKGKVFDEDCWSDEDY 514
+PEVE++APAVTGT NVLKA EAKV+ VVVVSS AV NP +P+ +V DE CWSD ++
Sbjct: 336 DPEVELLAPAVTGTMNVLKASSEAKVKGVVVVSSVAAVMVNPGWPQDEVMDEACWSDVEF 515
Query: 515 CRKKEDWYLVSKTLSEREALAFAAKTGLDVVTVCPSLVFGPLMQPTVNLSSEMIL 679
CR ++WY +SKTL+E EA +A +TGLDVV+VCPSLV GPL Q TVN SS +I+
Sbjct: 516 CRTNQNWYCLSKTLAETEAFDYAKRTGLDVVSVCPSLVIGPLRQSTVNASSSIIV 680
Score = 142 bits (304), Expect(2) = 9e-079
Identities = 59/87 (67%), Positives = 72/87 (82%)
Frame = +2 / +3
Query: 71 SVCVTGAGGFVASELVKLLLSRGQYAVRGTVRDPGASKNAHLKVLEGAEERLQLLKADLM 250
+VCVTGAGGFVAS LV+ LL+ G+Y V GTVRDPG +KNAHL ++GA RL+L +ADL+
Sbjct: 69 AVCVTGAGGFVASWLVERLLAGGRYVVHGTVRDPGDAKNAHLAAMDGAAARLRLFRADLL 248
Query: 251 DYDSIASAVAGCEGVFHVASPVLSHRP 331
DY S+A+AVAGC+GVFHVASPV S P
Sbjct: 249 DYGSVAAAVAGCDGVFHVASPVPSTYP 329
Score = 115 bits (246), Expect(3) = 4e-048
Identities = 53/81 (65%), Positives = 59/81 (72%)
Frame = -1 / -1
Query: 315 TGLATWKTPSQPATADAMLS*SIRSALRSCNLSSAPSSTLRWAFLLAPGSRTVPRTAYWP 136
TG ATWKTPSQPATA A L *S +SAL + ++APS R AFL +PGSRTVP T Y P
Sbjct: 313 TGDATWKTPSQPATAAATLP*SSKSALNRRSRAAAPSIAARCAFLASPGSRTVPWTTYRP 134
Query: 135 RERRSFTSSDATKPPAPVTHT 73
RR TS +ATKPPAPVTHT
Sbjct: 133 PARRRSTSHEATKPPAPVTHT 71
Score = 62.0 bits (129), Expect(3) = 4e-048
Identities = 30/51 (58%), Positives = 34/51 (66%)
Frame = -1 / -1
Query: 687 KYLRIISLLKFTVGCIKGPNTNDGQTVTTSSPVFAAKARASRSDSVLETKY 535
K ++ LL FTV C KGP T DGQT TTSSPV A + AS S SVLE +Y
Sbjct: 688 KQSTMMELLAFTVDCRKGPITRDGQTDTTSSPVLLA*SNASVSASVLERQY 536
Score = 54.7 bits (113), Expect(3) = 4e-048
Identities = 27/48 (56%), Positives = 31/48 (64%)
Frame = -1 / -1
Query: 480 TLPFG*IGLAYTAPHEDTTTTRLTFAS*QAFNTLVVPVTAGAMTSTSG 337
T +G G TA +DTTTT LT AS A T +VPVTAGA +STSG
Sbjct: 481 TSSWGQPGFTITAATDDTTTTPLTLASELALRTFMVPVTAGASSSTSG 338
>gb|CN127950.1|CN127950 RHOH1_26_C10.b1_A002 Acid- and alkaline-treated roots Sorghum bicolor
cDNA clone RHOH1_26_C10_A002 3', mRNA sequence
Length = 800
Score = 221 bits (478), Expect(3) = 3e-073
Identities = 91/112 (81%), Positives = 102/112 (91%)
Frame = +2 / +1
Query: 692 DLETVENVLSNMVDIRDVADALLLTYEKPEASGRYICSSHAIKISDMINILKTMYPSYPY 871
D ET+EN L N+VD+RDVADALLL YEKPEASGRYICSS IK+SDMINILKT+YP+YPY
Sbjct: 115 DRETIENRLRNIVDVRDVADALLLAYEKPEASGRYICSSQPIKVSDMINILKTLYPTYPY 294
Query: 872 PKNFVEDDVNSVYSSEKLQKLGWTFKPIEESLRDTVESYKAFGILN*TSN*D 1027
PKNFVE D NS+YSSEKLQKLGWTF+PIEE+LR++VESYKAFGILN* SN D
Sbjct: 295 PKNFVEMDDNSIYSSEKLQKLGWTFRPIEETLRESVESYKAFGILN*ASNWD 450
Score = 185 bits (399), Expect(2) = 5e-058
Identities = 82/113 (72%), Positives = 89/113 (78%)
Frame = -3 / -3
Query: 1030 TVLVGCSIQDAKCLVGFNSVTEGFLYRLEGPPQLLQFLRAVYRVDIIFHKIFGIRVRRIH 851
TV VG SIQDAKC VGFN+ EG LYR EGPP LL+FLR VY V I FHK+FGIRV I
Sbjct: 453 TVPVGRSIQDAKCFVGFNTFAEGLLYRPEGPP*LLKFLRTVYGVVIHFHKVFGIRVSWI* 274
Query: 850 GLQYVYHIRNFYCM*TADVSSRRFWLFVSQKKSISNITNIHHITEYIFNSLEI 692
L YVYHIRNFY +* ADVSSRRFW F+ QKKSISNITNIH+I+E IFN L I
Sbjct: 273 SL*YVYHIRNFYWL*AADVSSRRFWFFICQKKSISNITNIHNISESIFNGLTI 115
Score = 154 bits (330), Expect(3) = 4e-047
Identities = 75/114 (65%), Positives = 83/114 (72%)
Frame = +3 / +2
Query: 690 KISRLLKMYSVIWWIFVXXXXXXXXXTKSQKRLDDTSAVHMQ*KFLI**TY*RPCIRLTL 869
+I R LK+ S I W+FV K+QKRLDDTSA H Q*KFLI**TY*R I+LTL
Sbjct: 113 EIVRPLKIDSEILWMFVMLLMLFFWHMKNQKRLDDTSAAHNQ*KFLI**TY*RLYIQLTL 292
Query: 870 IPKILWKMMSTLYTALRNCRSWGGPSSL*RNPSVTLLNPTRHLAS*IEHPTRTV 1031
IPK LWK M+T YT LRN RS GGPS L*R PS +LNPT+HLAS*IE PT TV
Sbjct: 293 IPKTLWKWMTTPYTVLRNFRS*GGPSGL*RRPSAKVLNPTKHLAS*IERPTGTV 454
Score = 145 bits (312), Expect(2) = 6e-045
Identities = 73/133 (54%), Positives = 81/133 (60%)
Frame = -1 / -1
Query: 1089 LLFNCAYIIQEEFGGNSRWKQS*LDVQFRMPNAL*DSTVSRRDSSIGLKVHPSFCXXXXX 910
+L +C + ++ + S LD QFRMPNAL*DST+SRR SSIGLKVHPSF
Sbjct: 512 VLVHCLHEPDRDWTVGTAVSLSQLDAQFRMPNAL*DSTLSRRVSSIGLKVHPSF*SFSEL 333
Query: 909 XXXXXXXXTKFLG*G*DGYMVFSMFIISEIFIACELQMYRPDASGFXXXXXXXXXXXXXX 730
TKFLG*G* GY VF+MFIISE FI CELQMYRPDASGF
Sbjct: 332 YMELSSISTKFLG*G*VGYKVFNMFIISETFIGCELQMYRPDASGFSYARRRASATSRTS 153
Query: 729 XILLSTFSTVSRS 691
I LS FS VSRS
Sbjct: 152 TIFLSLFSMVSRS 114
Score = 145 bits (311), Expect(2) = 3e-042
Identities = 62/85 (72%), Positives = 68/85 (80%)
Frame = +1 / +3
Query: 772 KARSVWTIHLQFTCNKNF*YDKHTEDHVSVLPLSQKFCGR*CQLCIQL*ETAEAGVDLQA 951
K RSVWTIHLQ T NK+F*YDKH +D +S LPLSQK CG QL IQ *ET+EA VDLQA
Sbjct: 195 KTRSVWTIHLQLTTNKSF*YDKHIKDFISNLPLSQKLCGNG*QLHIQF*ETSEARVDLQA 374
Query: 952 YRGIPP*HC*ILQGIWHPELNIQLG 1026
YRG PP C*ILQ IWHPEL++QLG
Sbjct: 375 YRGDPPRKC*ILQSIWHPELSVQLG 449
Score = 143 bits (307), Expect(2) = 2e-038
Identities = 61/85 (71%), Positives = 65/85 (76%)
Frame = -2 / -2
Query: 1025 PSWMFNSGCQMPCRIQQCHGGIPL*A*RSTPASAVSQSCIQS*HHLPQNFWDKGKTDTWS 846
PSW NSGCQM CRIQ GG PL*A*RST AS VSQ+CI S H PQ+FWDKGK D S
Sbjct: 448 PSWTLNSGCQMLCRIQHFRGGSPL*A*RSTLASEVSQNCIWSCHPFPQSFWDKGKLDIKS 269
Query: 845 SVCLSYQKFLLHVNCRCIVQTLLAF 771
+CLSYQK LL V+CRCIVQTLL F
Sbjct: 268 LICLSYQKLLLVVSCRCIVQTLLVF 194
Score = 69.8 bits (146), Expect(3) = 3e-073
Identities = 27/37 (72%), Positives = 33/37 (89%)
Frame = +2 / +1
Query: 581 AAKTGLDVVTVCPSLVFGPLMQPTVNLSSEMILKYFK 691
AAKTGLDVVT+CP+LVFGPLMQ +N SS+++L YFK
Sbjct: 1 AAKTGLDVVTICPALVFGPLMQSILNASSKILLNYFK 111
Score = 61.6 bits (128), Expect(2) = 5e-058
Identities = 24/37 (64%), Positives = 28/37 (75%)
Frame = -3 / -3
Query: 691 FEIFKDHFAAQIYCRLHQGSKY**RTNSYNVQPCFCC 581
FEI K++F +I RLHQGSKY R NSYN+QP FCC
Sbjct: 111 FEIVKEYFTTRI*YRLHQGSKYQGRANSYNIQPRFCC 1
Score = 57.4 bits (119), Expect(2) = 6e-045
Identities = 25/36 (69%), Positives = 27/36 (75%)
Frame = -1 / -1
Query: 690 LKYLRIISLLKFTVGCIKGPNTNDGQTVTTSSPVFA 583
LK LR I LL F + CIKGPNT GQ VTTS+PVFA
Sbjct: 110 LK*LRSILLLAFNIDCIKGPNTKAGQIVTTSNPVFA 3
Score = 51.9 bits (107), Expect(3) = 4e-047
Identities = 25/37 (67%), Positives = 27/37 (72%)
Frame = +3 / +2
Query: 582 QQKQGWTL*LFVRH*YLDP*CSLQ*I*AAK*SLNISK 692
QQK+GW L*LF R YLDP*CSL *+ K SL ISK
Sbjct: 2 QQKRGWML*LFARPWYLDP*CSLY*MRVVKYSLTISK 112
Score = 49.2 bits (101), Expect(2) = 3e-042
Identities = 22/37 (59%), Positives = 24/37 (64%)
Frame = +1 / +3
Query: 583 SKNRAGRCNCLSVISIWTLDAAYSKFEQRNDP*IFQR 693
SKN G CN L + IWTLDA Y K E N P*+FQR
Sbjct: 3 SKNGVGCCNYLPGLGIWTLDAVYIKCE**NTP*LFQR 113
Score = 37.7 bits (76), Expect(2) = 2e-038
Identities = 22/37 (59%), Positives = 24/37 (64%)
Frame = -2 / -2
Query: 692 L*NI*GSFRCSNLL*AASRVQILMTDKQLQRPALFLL 582
L*N *G F S+L+* ASRVQI K LQ P FLL
Sbjct: 112 L*NS*GVFYYSHLI*TASRVQIPRPGK*LQHPTPFLL 2
Score = 25.4 bits (49), Expect(3) = 3e-073
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +3 / +3
Query: 1104 SLFFNIVI*WFRTK*VGQ 1157
++FF+ VI FRTK* GQ
Sbjct: 558 AIFFSSVIWGFRTK*AGQ 611
Score = 23.1 bits (44), Expect(3) = 4e-047
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +2 / +2
Query: 1106 FIFQYCYLVVQDQISRP 1156
+IF CYL + ++SRP
Sbjct: 560 YIFFQCYLGIPYEMSRP 610
>gb|CN125588.1|CN125588 RHOH1_12_B03.b1_A002 Acid- and alkaline-treated roots Sorghum bicolor
cDNA clone RHOH1_12_B03_A002 3', mRNA sequence
Length = 763
Score = 269 bits (582), Expect = 6e-071
Identities = 114/211 (54%), Positives = 153/211 (72%)
Frame = +2 / +1
Query: 389 KACYEAKVRRVVVVSSCGAVYANPIYPKGKVFDEDCWSDEDYCRKKEDWYLVSKTLSERE 568
KA EAKV+ VVVVSS AV NP +P+ +V DE CWSD ++CR ++WY +SKTL+E E
Sbjct: 1 KASSEAKVKGVVVVSSVAAVMVNPGWPQDEVMDEACWSDVEFCRTNQNWYCLSKTLAETE 180
Query: 569 ALAFAAKTGLDVVTVCPSLVFGPLMQPTVNLSSEMILKYFKDLETVENVLSNMVDIRDVA 748
A +A +TGLDVV+VCPSLV GPL Q TVN SS +I+ K V+ L N VD+RDVA
Sbjct: 181 AFDYAKRTGLDVVSVCPSLVIGPLRQSTVNASSSIIVDCLKGDHEVKLKLRNFVDVRDVA 360
Query: 749 DALLLTYEKPEASGRYICSSHAIKISDMINILKTMYPSYPYPKNFVEDDVNSVYSSEKLQ 928
+ALLL YE PEASGRYIC ++A ++SD+I +LK YP+Y + V+ ++SS+KL+
Sbjct: 361 NALLLVYETPEASGRYICDANARQVSDVIALLKNWYPAYNHATKLVQVSDEPLFSSKKLE 540
Query: 929 KLGWTFKPIEESLRDTVESYKAFGILN*TSN 1021
LGW F+ EE+LRD+VES+ A G+L+*T++
Sbjct: 541 ALGWKFRTFEETLRDSVESFTAAGVLD*TNS 633
Score = 102 bits (217), Expect(2) = 2e-022
Identities = 53/127 (41%), Positives = 72/127 (56%)
Frame = -3 / -2
Query: 1015 CSIQDAKCLVGFNSVTEGFLYRLEGPPQLLQFLRAVYRVDIIFHKIFGIRVRRIHGLQYV 836
CSIQD GFN+V EG L R E P Q LQ L A R H++ G+ V R+ LQ
Sbjct: 627 CSIQDTCRREGFNAVPEGLLERPEFPAQRLQLLGAEQRFIAHLHELGGMIVGRVPVLQQR 448
Query: 835 YHIRNFYCM*TADVSSRRFWLFVSQKKSISNITNIHHITEYIFNSLEIFEIFKDHFAAQI 656
Y IR+ C+ ADV+SRR V Q++SI ++ NIH + + F+ + F+ AA +
Sbjct: 447 YDIRHLPCICIADVASRRLRSLVHQEQSIGDVANIHEVPQLQFHLMISFQAIDYDGAACV 268
Query: 655 YCRLHQG 635
+CRL QG
Sbjct: 267 HCRLPQG 247
Score = 28.6 bits (56), Expect(2) = 2e-022
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = -1 / -3
Query: 480 TLPFG*IGLAYTAPHEDTTTTRLTFAS 400
T +G G TA +DTTTT LT AS
Sbjct: 92 TSSWGQPGFTITAATDDTTTTPLTLAS 12
>gb|CX614598.1|CX614598 GABR1_15_C04.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_15_C04_A002 3', mRNA sequence
Length = 744
Score = 261 bits (565), Expect = 1e-068
Identities = 109/203 (53%), Positives = 148/203 (72%)
Frame = +2 / +3
Query: 413 RRVVVVSSCGAVYANPIYPKGKVFDEDCWSDEDYCRKKEDWYLVSKTLSEREALAFAAKT 592
+RVVVVSS AV NP +P+ +V DE CWSD ++CR ++WY +SKTL+E EA +A +T
Sbjct: 3 KRVVVVSSVAAVMVNPGWPQDEVMDEACWSDVEFCRTNQNWYCLSKTLAETEAFDYAKRT 182
Query: 593 GLDVVTVCPSLVFGPLMQPTVNLSSEMILKYFKDLETVENVLSNMVDIRDVADALLLTYE 772
GLDVV+VCPSLV GPL Q TVN SS +I+ K V+ L N VD+RDVA+ALLL YE
Sbjct: 183 GLDVVSVCPSLVIGPLRQSTVNASSSIIVDCLKGDHEVKLKLRNFVDVRDVANALLLVYE 362
Query: 773 KPEASGRYICSSHAIKISDMINILKTMYPSYPYPKNFVEDDVNSVYSSEKLQKLGWTFKP 952
PEASGRYIC ++A ++SD+I +LK YP+Y + V+ ++SS+KL+ LGW F+
Sbjct: 363 TPEASGRYICDANARQVSDVIALLKNWYPAYNHATKLVQVSDEPLFSSKKLEALGWKFRT 542
Query: 953 IEESLRDTVESYKAFGILN*TSN 1021
EE+LRD+VES+ A G+L+*T++
Sbjct: 543 FEETLRDSVESFTAAGVLD*TNS 611
>gb|CN146030.1|CN146030 WOUND1_37_A04.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_37_A04_A002 3', mRNA sequence
Length = 732
Score = 256 bits (554), Expect = 4e-067
Identities = 107/200 (53%), Positives = 145/200 (72%)
Frame = +2 / +2
Query: 422 VVVSSCGAVYANPIYPKGKVFDEDCWSDEDYCRKKEDWYLVSKTLSEREALAFAAKTGLD 601
VVVSS AV NP +P+ +V DE CWSD ++CR ++WY +SKTL+E EA +A +TGLD
Sbjct: 2 VVVSSVAAVMVNPGWPQDEVMDEACWSDVEFCRTNQNWYCLSKTLAETEAFDYAKRTGLD 181
Query: 602 VVTVCPSLVFGPLMQPTVNLSSEMILKYFKDLETVENVLSNMVDIRDVADALLLTYEKPE 781
VV+VCPSLV GPL Q TVN SS +I+ K V+ L N VD+RDVA+ALLL YE PE
Sbjct: 182 VVSVCPSLVIGPLRQSTVNASSSIIVDCLKGDHEVKLKLRNFVDVRDVANALLLVYETPE 361
Query: 782 ASGRYICSSHAIKISDMINILKTMYPSYPYPKNFVEDDVNSVYSSEKLQKLGWTFKPIEE 961
ASGRYIC ++A ++SD+I +LK YP+Y + V+ ++SS+KL+ LGW F+ EE
Sbjct: 362 ASGRYICDANARQVSDVIALLKNWYPAYNHATKLVQVSDEPLFSSKKLEALGWKFRTFEE 541
Query: 962 SLRDTVESYKAFGILN*TSN 1021
+LRD+VES+ A G+L+*T++
Sbjct: 542 TLRDSVESFTAAGVLD*TNS 601
>gb|CN132335.1|CN132335 OX1_5_C03.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_5_C03_A002 5', mRNA sequence
Length = 626
Score = 148 bits (318), Expect(2) = 1e-059
Identities = 57/111 (51%), Positives = 80/111 (72%)
Frame = +2 / +3
Query: 311 PVLSHRPSNPEVEVIAPAVTGTTNVLKACYEAKVRRVVVVSSCGAVYANPIYPKGKVFDE 490
P + + +PE EV++PAV GT NVL+AC V++VVVVSS AV+ NP +P G++ DE
Sbjct: 294 PCPADKVLDPESEVLSPAVKGTLNVLQACSANNVQKVVVVSSTAAVHYNPSWPHGRIKDE 473
Query: 491 DCWSDEDYCRKKEDWYLVSKTLSEREALAFAAKTGLDVVTVCPSLVFGPLM 643
CWSD+++C K E+WY +KT++E AL + K GL+VVTVCP +V GPL+
Sbjct: 474 SCWSDKNFCMKNENWYTAAKTIAEETALEYGEKNGLNVVTVCPCIVLGPLL 626
Score = 103 bits (220), Expect(2) = 1e-059
Identities = 47/81 (58%), Positives = 56/81 (69%)
Frame = +2 / +1
Query: 92 GGFVASELVKLLLSRGQYAVRGTVRDPGASKNAHLKVLEGAEERLQLLKADLMDYDSIAS 271
GG + + LL YAV TVRDP KNAHL+ L+GA E L L KAD++D D++A+
Sbjct: 76 GGGYVASWLVKLLLSRGYAVHATVRDPSDPKNAHLRRLDGAPESLLLFKADVLDRDALAA 255
Query: 272 AVAGCEGVFHVASPVLSHRPS 334
AVAGCEGVFHVASPVL R S
Sbjct: 256 AVAGCEGVFHVASPVLQTRSS 318
Score = 71.2 bits (149), Expect(5) = 3e-033
Identities = 37/58 (63%), Positives = 38/58 (65%)
Frame = -1 / -1
Query: 318 RTGLATWKTPSQPATADAMLS*SIRSALRSCNLSSAPSSTLRWAFLLAPGSRTVPRTA 145
RTG ATWKTPS PATA A S S SAL LS APSS R AFL + GSRTV TA
Sbjct: 302 RTGEATWKTPSHPATAAARASRSSTSALNRSKLSGAPSSRRRCAFLGSLGSRTVACTA 129
Score = 44.1 bits (90), Expect(5) = 3e-033
Identities = 17/22 (77%), Positives = 18/22 (81%)
Frame = -1 / -1
Query: 138 PRERRSFTSSDATKPPAPVTHT 73
PRERRS TS +AT PP PVTHT
Sbjct: 125 PRERRSLTSHEATYPPPPVTHT 60
Score = 43.2 bits (88), Expect(5) = 3e-033
Identities = 24/47 (51%), Positives = 30/47 (63%)
Frame = -1 / -2
Query: 477 LPFG*IGLAYTAPHEDTTTTRLTFAS*QAFNTLVVPVTAGAMTSTSG 337
LP+G +GL TA ++TTTT T + QA T VP+TAG TS SG
Sbjct: 460 LPWGQLGL**TAAVDETTTTF*TLFAEQA*RTFRVPLTAGDNTSDSG 320
Score = 35.4 bits (71), Expect(5) = 3e-033
Identities = 17/34 (50%), Positives = 19/34 (55%)
Frame = -1 / -2
Query: 636 GPNTNDGQTVTTSSPVFAAKARASRSDSVLETKY 535
GP T GQTVTT SP F+ + A S VL Y
Sbjct: 619 GPKTIQGQTVTTFSPFFSPYSNAVSSAIVLAAVY 518
Score = 22.6 bits (43), Expect(5) = 3e-033
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = -2 / -3
Query: 548 WKLNTNPPSSCSNPHLTSSLH 486
W+ T+ SSC + LTSS H
Sbjct: 531 WQQCTSSHSSCRSFCLTSSSH 469
>gb|BM324463.1|BM324463 PIC1_31_E07.b1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 484
Score = 221 bits (476), Expect = 2e-056
Identities = 97/127 (76%), Positives = 109/127 (85%)
Frame = +2 / +2
Query: 71 SVCVTGAGGFVASELVKLLLSRGQYAVRGTVRDPGASKNAHLKVLEGAEERLQLLKADLM 250
+ CVTGAGGF+AS LVKLLLS G+YAVRGTVRD G KNAHL LE A ERLQL+KAD++
Sbjct: 92 TACVTGAGGFLASWLVKLLLSTGRYAVRGTVRDLGDGKNAHLMTLEDAGERLQLVKADML 271
Query: 251 DYDSIASAVAGCEGVFHVASPVLSHRPSNPEVEVIAPAVTGTTNVLKACYEAKVRRVVVV 430
DY S+ASAVAGCEGVFHVASPV S + SNPE +VIAPAVTGT NVLKAC+EAKV+RVVVV
Sbjct: 272 DYGSVASAVAGCEGVFHVASPVPSGQLSNPEADVIAPAVTGTLNVLKACHEAKVKRVVVV 451
Query: 431 SSCGAVY 451
SS AV+
Sbjct: 452 SSVAAVF 472
Score = 192 bits (414), Expect = 9e-048
Identities = 90/126 (71%), Positives = 95/126 (75%)
Frame = -1 / -2
Query: 447 TAPHEDTTTTRLTFAS*QAFNTLVVPVTAGAMTSTSGLEGRWERTGLATWKTPSQPATAD 268
TA EDTTTT TFAS QAFNT VPVTAGAMTS SGLE E TGLATWKTPSQPATAD
Sbjct: 468 TAATEDTTTTLFTFASWQAFNTFSVPVTAGAMTSASGLES*PEGTGLATWKTPSQPATAD 289
Query: 267 AMLS*SIRSALRSCNLSSAPSSTLRWAFLLAPGSRTVPRTAYWPRERRSFTSSDATKPPA 88
A L *S SAL +CNLS A SS +RWAFL +P SRTVPRTA P E +S TS DA KPPA
Sbjct: 288 ATLP*SSMSALTNCNLSPASSSVIRWAFLPSPRSRTVPRTA*RPVESKSLTSHDARKPPA 109
Query: 87 PVTHTL 70
PVT +
Sbjct: 108 PVTQAV 91
Score = 140 bits (300), Expect = 5e-032
Identities = 65/111 (58%), Positives = 76/111 (68%)
Frame = -3 / -1
Query: 409 FCLIASL*HIGCTCYSGSYDLHLRVGGSMGKDRASYMEDTLTAGNC*CNAVVVHQISLEK 230
FCL+AS HI CT YS SYD+ LRVG G DRA MEDTLTAG+ NA VV +SL++
Sbjct: 430 FCLVASFQHIQCTSYSRSYDICLRVGELTGGDRARDMEDTLTAGDRGRNAAVVQHVSLDQ 251
Query: 229 LQPFLSSFQHLEMGILASTRVAHGAADRVLAPGEEELHQLRRDEAASAGHA 77
LQP F+ +MGILA T + HGAAD V A GE+EL + RR EA AGHA
Sbjct: 250 LQPLAGVFECHKMGILAITEIPHGAADGVAAGGEQELDEPRRQEAPRAGHA 98
Score = 118 bits (252), Expect = 2e-025
Identities = 54/93 (58%), Positives = 63/93 (67%)
Frame = -2 / -3
Query: 449 TQLHMKTPPQLA*LLPHSKPLTHWLYLLQREL*PPPQGWRVDGKGQG*LHGRHPHSRQLL 270
TQ +K P QL+ LLP K TH +Y LQ+EL* PQGWRVD +GQG HGRHPHSR+
Sbjct: 470 TQQPLKIPQQLSSLLPRGKLSTHSVYQLQQEL*HLPQGWRVDRRGQGSRHGRHPHSRRPR 291
Query: 269 MQCCRSPSDQP*EAATFPQLLPAP*DGHSC*HQ 171
Q CRSP+ QP* AT + L *DGHSC H+
Sbjct: 290 TQRCRSPACQP*PTATSRRRLRVS*DGHSCHHR 192
Score = 112 bits (240), Expect = 9e-024
Identities = 60/102 (58%), Positives = 67/102 (65%)
Frame = +3 / +3
Query: 144 TRSAAPCATLVLARMPISRCWKELRKGCSFSRLI*WTTTALHQQLPAVRVSSM*LALSFP 323
T SAAPC V+ARMPI K +GCS+SRL WTT AL + PAVRVSSM ALS P
Sbjct: 165 TPSAAPCGISVMARMPIL*HSKTPARGCSWSRLTCWTTAALRPRSPAVRVSSMSRALSPP 344
Query: 324 IDPPTLRWRS*LPL*QVQPMC*RLAMRQKLGELWWCLHVELC 449
++ PTLR S*L L* V MC*+LA RQK EL W L LC
Sbjct: 345 VNSPTLRQMS*LLL*LVH*MC*KLATRQK*RELLWYLQWLLC 470
>gb|CF758652.1|CF758652 DSAF1_35_A01.g1_A011 Drought-stressed after flowering Sorghum
bicolor cDNA clone DSAF1_35_A01_A011 3', mRNA sequence
Length = 463
Score = 220 bits (474), Expect = 5e-056
Identities = 89/111 (80%), Positives = 97/111 (87%)
Frame = +2 / +2
Query: 197 KVLEGAEERLQLLKADLMDYDSIASAVAGCEGVFHVASPVLSHRPSNPEVEVIAPAVTGT 376
K LEGA ERLQLLK DL+DY S+ASA+AGCEGVFHVASPV S R SNPEVEVI PAV GT
Sbjct: 2 KALEGAMERLQLLKVDLLDYSSVASAIAGCEGVFHVASPVPSGRSSNPEVEVIGPAVLGT 181
Query: 377 TNVLKACYEAKVRRVVVVSSCGAVYANPIYPKGKVFDEDCWSDEDYCRKKE 529
TNVLKACYEAKV+RVVVVSS A+++NP +PKGK FDEDCWSDEDYCRK E
Sbjct: 182 TNVLKACYEAKVKRVVVVSSVAAIFSNPYWPKGKAFDEDCWSDEDYCRKNE 334
Score = 171 bits (367), Expect = 3e-041
Identities = 77/107 (71%), Positives = 82/107 (76%)
Frame = +3 / +3
Query: 198 RCWKELRKGCSFSRLI*WTTTALHQQLPAVRVSSM*LALSFPIDPPTLRWRS*LPL*QVQ 377
R WKEL KGCSF RLI WTT LHQQLPAVRVSSM*L L P+ PPTLRWRS*+ L Q
Sbjct: 3 RRWKELWKGCSFLRLICWTTAVLHQQLPAVRVSSM*LVLFLPVGPPTLRWRS*VLLY*EQ 182
Query: 378 PMC*RLAMRQKLGELWWCLHVELCMLILFIRRVRCLMKTAGQMRITA 518
PMC*RLAMRQKL ELWWCL ++L + L R R LMKT GQMRITA
Sbjct: 183 PMC*RLAMRQKLSELWWCLLLQLYSVTLTGLRARPLMKTVGQMRITA 323
Score = 165 bits (355), Expect(2) = 3e-047
Identities = 67/82 (81%), Positives = 73/82 (89%)
Frame = -2 / -3
Query: 443 LHMKTPPQLA*LLPHSKPLTHWLYLLQREL*PPPQGWRVDGKGQG*LHGRHPHSRQLLMQ 264
L KTPPQLA*LLPHSKPLTHWL+L+Q++L*PPPQGWR D K Q *LHGRHPHSRQLLMQ
Sbjct: 248 LQQKTPPQLA*LLPHSKPLTHWLFLIQQDL*PPPQGWRTDRKEQD*LHGRHPHSRQLLMQ 69
Query: 263 CCRSPSDQP*EAATFPQLLPAP 198
C SP++QP*EAATFP LLPAP
Sbjct: 68 HCCSPTNQP*EAATFP*LLPAP 3
Score = 151 bits (324), Expect = 2e-035
Identities = 73/94 (77%), Positives = 74/94 (78%)
Frame = -1 / -2
Query: 477 LPFG*IGLAYTAPHEDTTTTRLTFAS*QAFNTLVVPVTAGAMTSTSGLEGRWERTGLATW 298
LP G GL A EDTTTTRLTFAS*QAFNTLVVP TAG MTSTSGLE R E TGLATW
Sbjct: 282 LPLGQ*GLLNIAATEDTTTTRLTFAS*QAFNTLVVPNTAGPMTSTSGLEDRPEGTGLATW 103
Query: 297 KTPSQPATADAMLS*SIRSALRSCNLSSAPSSTL 196
KTPSQPA ADA L *S +S LRSCNLS APSS L
Sbjct: 102 KTPSQPAIADATLL*SNKSTLRSCNLSIAPSSAL 1
Score = 133 bits (284), Expect = 8e-030
Identities = 55/71 (77%), Positives = 61/71 (85%)
Frame = -3 / -1
Query: 409 FCLIASL*HIGCTCYSGSYDLHLRVGGSMGKDRASYMEDTLTAGNC*CNAVVVHQISLEK 230
FCLIASL*HIGC+ YS +YDLHLRVGG G++R SYMEDTLTAGNC*CN VV QI+L+K
Sbjct: 214 FCLIASL*HIGCS*YSRTYDLHLRVGGPTGRNRTSYMEDTLTAGNC*CNTAVVQQINLKK 35
Query: 229 LQPFLSSFQHL 197
LQPF SSFQ L
Sbjct: 34 LQPFHSSFQRL 2
Score = 101 bits (215), Expect(2) = 6e-026
Identities = 51/67 (76%), Positives = 54/67 (80%)
Frame = +1 / +1
Query: 331 LQP*GGGHSSRCNRYNQCVKGLL*GKS*ASCGGVFMWSCVC*SYLSEG*GV**RLLVR*G 510
LQP*GGGH S C R NQCVKGLL*GKS*ASCGGVF S + * L+ G G+**RLLVR*G
Sbjct: 136 LQP*GGGHRSCCIRNNQCVKGLL*GKS*ASCGGVFCCSYIQ*PLLA*GQGL**RLLVR*G 315
Query: 511 LLQEEGG 531
LLQEE G
Sbjct: 316 LLQEE*G 336
Score = 45.5 bits (93), Expect(2) = 3e-047
Identities = 17/30 (56%), Positives = 21/30 (70%)
Frame = -2 / -3
Query: 560 PTVFWKLNTNPPSSCSNPHLTSSLHQTPYP 471
P ++ +P SSCSNPHLT+SLHQ P P
Sbjct: 365 PLLY*GTTVSPHSSCSNPHLTNSLHQRPCP 276
Score = 38.2 bits (77), Expect(2) = 6e-026
Identities = 19/25 (76%), Positives = 20/25 (80%)
Frame = +1 / +1
Query: 196 QGAGRS*GKVAASQG*SDGLRQHCI 270
QGAGRS GKVAAS G* GL+Q CI
Sbjct: 1 QGAGRSYGKVAAS*G*FVGLQQCCI 75
>gb|BG048617.1|BG048617 OV1_14_H08.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 482
Score = 213 bits (459), Expect = 5e-054
Identities = 92/133 (69%), Positives = 110/133 (82%)
Frame = +2 / +1
Query: 62 VRKSVCVTGAGGFVASELVKLLLSRGQYAVRGTVRDPGASKNAHLKVLEGAEERLQLLKA 241
++K+VCVTGAGGFVAS LV+ LLSRG Y VRGTVRDP KNAHL L+GA ERL+L KA
Sbjct: 25 MKKTVCVTGAGGFVASWLVQRLLSRGDYLVRGTVRDPSDPKNAHLMALDGAGERLRLFKA 204
Query: 242 DLMDYDSIASAVAGCEGVFHVASPVLSHRPSNPEVEVIAPAVTGTTNVLKACYEAKVRRV 421
DL+D S+A+AVAGC+GVFHVASPV + P+NP+VE++APAVTGT N+L+A + A VRRV
Sbjct: 205 DLLDRASVAAAVAGCDGVFHVASPVPAVEPTNPDVEIMAPAVTGTQNMLEASHAANVRRV 384
Query: 422 VVVSSCGAVYANP 460
VVVSS AV ANP
Sbjct: 385 VVVSSVAAVIANP 423
Score = 173 bits (373), Expect = 4e-042
Identities = 84/132 (63%), Positives = 94/132 (71%)
Frame = -1 / -1
Query: 462 IGLAYTAPHEDTTTTRLTFAS*QAFNTLVVPVTAGAMTSTSGLEGRWERTGLATWKTPSQ 283
+G A TA +DTTTTR T A+ A + VPVTAGAM STSGL G TGLATWKTPSQ
Sbjct: 425 VGFAITAATDDTTTTRRTLAAWLASSMFCVPVTAGAMISTSGLVGSTAGTGLATWKTPSQ 246
Query: 282 PATADAMLS*SIRSALRSCNLSSAPSSTLRWAFLLAPGSRTVPRTAYWPRERRSFTSSDA 103
PATA A L+ S +SAL S S APSS +R AFL + GSRTVPRT P ERR TS +A
Sbjct: 245 PATAAATLARSNKSALNSRRRSPAPSSAIRCAFLGSLGSRTVPRTR*SPLERRRCTSHEA 66
Query: 102 TKPPAPVTHTLF 67
TKPPAPVTHT+F
Sbjct: 65 TKPPAPVTHTVF 30
Score = 102 bits (218), Expect = 1e-020
Identities = 50/114 (43%), Positives = 69/114 (60%)
Frame = -3 / -3
Query: 400 IASL*HIGCTCYSGSYDLHLRVGGSMGKDRASYMEDTLTAGNC*CNAVVVHQISLEKLQP 221
+ASL H+ + S+DLH+ VGG G+D A +ED + A N +A V Q+SLE+ Q
Sbjct: 363 VASLQHVLRAGHRRSHDLHIGVGGLDGRDGAGDVEDAVAASNGGGDAGTVQQVSLEQPQA 184
Query: 220 FLSSFQHLEMGILASTRVAHGAADRVLAPGEEELHQLRRDEAASAGHAHALPHR 59
+ Q ++ +L TR+A+ A V+A GEE LH+ R DEAA A HAH L HR
Sbjct: 183 LPGAVQRHQVRVLGITRIANSATHEVVASGEEALHEPRGDEAAGARHAHRLLHR 22
>gb|CN135147.1|CN135147 OX1_30_G11.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_30_G11_A002 5', mRNA sequence
Length = 773
Score = 155 bits (333), Expect(2) = 2e-051
Identities = 61/117 (52%), Positives = 87/117 (74%)
Frame = +2 / +1
Query: 341 EVEVIAPAVTGTTNVLKACYEAKVRRVVVVSSCGAVYANPIYPKGKVFDEDCWSDEDYCR 520
++EV+ PAV GT NVLK C KV +VVV+SS AV +NP +P+ ++ DE CWSD ++C+
Sbjct: 376 QLEVLDPAVKGT*NVLKVCSTLKVHKVVVMSSNAAVTSNPNWPQDRLKDESCWSDTEFCK 555
Query: 521 KKEDWYLVSKTLSEREALAFAAKTGLDVVTVCPSLVFGPLMQPTVNLSSEMILKYFK 691
+KEDWY V+KTL+E+EA +A GL+VV +CP VFGPL+Q +VN SS++++ K
Sbjct: 556 EKEDWYSVAKTLAEQEASEYARNNGLNVVALCPPYVFGPLLQSSVNTSSKLLIYVIK 726
Score = 77.1 bits (162), Expect(2) = 1e-022
Identities = 45/108 (41%), Positives = 52/108 (48%)
Frame = -1 / -1
Query: 666 LLKFTVGCIKGPNTNDGQTVTTSSPVFAAKARASRSDSVLETKYXXXXXXXXXXXXXXXX 487
LL FT C GP T G + TT SP+ A + AS S VL T+Y
Sbjct: 701 LLVFTEDCNSGPKT*GGHSATTFSPLLRAYSEASCSARVLATEYQSSFSLQNSVSDQQLS 522
Query: 486 SNTLPFG*IGLAYTAPHEDTTTTRLTFAS*QAFNTLVVPVTAGAMTST 343
S +L G GL TA ED TTT TF Q F T VP TAG+ TS+
Sbjct: 521 SLSLS*GQFGLEVTAALEDITTTL*TFRVEQTFKTFQVPFTAGSSTSS 378
Score = 72.5 bits (152), Expect(2) = 2e-051
Identities = 29/60 (48%), Positives = 42/60 (70%)
Frame = +2 / +3
Query: 173 GASKNAHLKVLEGAEERLQLLKADLMDYDSIASAVAGCEGVFHVASPVLSHRPSNPEVEV 352
G KNAHLK L+ A E L L KAD++D +++ AV GC+GVFH+A+PV + +P+V +
Sbjct: 21 GDPKNAHLKKLDRAPENLHLFKADVLDCETLTPAVQGCQGVFHLATPVPEDKILHPDVSL 200
Score = 54.2 bits (112), Expect(2) = 1e-022
Identities = 25/48 (52%), Positives = 28/48 (58%)
Frame = -1 / -2
Query: 315 TGLATWKTPSQPATADAMLS*SIRSALRSCNLSSAPSSTLRWAFLLAP 172
TG+A WKTP P TA +S S SAL C S A SS RWAF +P
Sbjct: 163 TGVARWKTP*HP*TAGVRVSQSSTSALNRCRFSGALSSFFRWAFFGSP 20
>gb|CW338277.1|CW338277 104_838_11484658_116_36129_039 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11484658, DNA
sequence
Length = 647
Score = 166 bits (357), Expect(2) = 1e-050
Identities = 69/112 (61%), Positives = 87/112 (77%)
Frame = +2 / -3
Query: 173 GASKNAHLKVLEGAEERLQLLKADLMDYDSIASAVAGCEGVFHVASPVLSHRPSNPEVEV 352
G K AHL L+GA ERL+L KAD++D+ +A+AVAGC+GVFHVASPV + +P++PE+EV
Sbjct: 336 GDPKYAHLMALDGAVERLRLFKADMLDHAGVAAAVAGCDGVFHVASPVPASKPADPELEV 157
Query: 353 IAPAVTGTTNVLKACYEAKVRRVVVVSSCGAVYANPIYPKGKVFDEDCWSDE 508
+APAV GT NVL+AC+EA VRRVVVVSS A+ NP G V DE+ WSDE
Sbjct: 156 VAPAVDGTRNVLRACHEANVRRVVVVSSVAAIAVNPNCRNGVVLDEEWWSDE 1
Score = 109 bits (232), Expect(2) = 1e-033
Identities = 56/103 (54%), Positives = 67/103 (65%)
Frame = -1 / +2
Query: 480 TLPFG*IGLAYTAPHEDTTTTRLTFAS*QAFNTLVVPVTAGAMTSTSGLEGRWERTGLAT 301
T P +G A ++TTTTR T AS QA +TL VP TAGA TS+SG G TGLAT
Sbjct: 29 TTPLRQLGFTAMAATDETTTTRRTLASWQALSTLRVPSTAGATTSSSGSAGFDAGTGLAT 208
Query: 300 WKTPSQPATADAMLS*SIRSALRSCNLSSAPSSTLRWAFLLAP 172
WKTPSQPATA A + S SAL S + S+APSS +R A+ +P
Sbjct: 209 WKTPSQPATAAATPAWSSMSALNSRSRSTAPSSAIRCAYFGSP 337
Score = 58.8 bits (122), Expect(2) = 1e-050
Identities = 24/34 (70%), Positives = 27/34 (79%)
Frame = +2 / -2
Query: 71 SVCVTGAGGFVASELVKLLLSRGQYAVRGTVRDP 172
+VCVTGAGGF+AS LV+ LLS G Y V G VRDP
Sbjct: 568 TVCVTGAGGFIASWLVQRLLSSGSYVVHGAVRDP 467
Score = 56.5 bits (117), Expect(2) = 1e-033
Identities = 25/44 (56%), Positives = 29/44 (65%)
Frame = -3 / +2
Query: 187 ILASTRVAHGAADRVLAPGEEELHQLRRDEAASAGHAHALPHRI 56
++ TRVAHGA V A GEE LHQ RRDEA SA HA+ R+
Sbjct: 452 VVLLTRVAHGAVHDVAAAGEEALHQPRRDEATSASHANRRRRRL 583
>gb|CD213624.1|CD213624 HS1_52_G04.b1_A012 Heat-shocked seedlings Sorghum bicolor cDNA clone
HS1_52_G04_A012 3', mRNA sequence
Length = 604
Score = 201 bits (433), Expect = 2e-050
Identities = 86/158 (54%), Positives = 116/158 (73%)
Frame = +2 / +3
Query: 548 KTLSEREALAFAAKTGLDVVTVCPSLVFGPLMQPTVNLSSEMILKYFKDLETVENVLSNM 727
KTL+E EA +A +TGLDVV+VCPSLV GPL+Q TVN SS +I+ K V+ L N
Sbjct: 3 KTLAETEAFDYAKRTGLDVVSVCPSLVIGPLLQSTVNASSSIIVDCLKGDHEVKLKLRNF 182
Query: 728 VDIRDVADALLLTYEKPEASGRYICSSHAIKISDMINILKTMYPSYPYPKNFVEDDVNSV 907
VD+RDVADALLL YE PEASGRYIC ++A ++SD+I +LK YP+Y + V+ +
Sbjct: 183 VDVRDVADALLLVYETPEASGRYICDANARQVSDVIALLKNWYPAYNHATKLVQVSDEPL 362
Query: 908 YSSEKLQKLGWTFKPIEESLRDTVESYKAFGILN*TSN 1021
+SS+KL+ LGW F+ EE+LRD+VES+ A G+L+*T++
Sbjct: 363 FSSKKLEALGWKFRTFEETLRDSVESFTAAGVLD*TNS 476
>gb|CW316181.1|CW316181 104_807_11472758_116_35843_055 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11472758, DNA
sequence
Length = 620
Score = 164 bits (352), Expect(2) = 6e-050
Identities = 68/111 (61%), Positives = 86/111 (77%)
Frame = +2 / -3
Query: 173 GASKNAHLKVLEGAEERLQLLKADLMDYDSIASAVAGCEGVFHVASPVLSHRPSNPEVEV 352
G K AHL L+GA ERL+L KAD++D+ +A+AVAGC+GVFHVASPV + +P++PE+EV
Sbjct: 333 GDPKYAHLMALDGAVERLRLFKADMLDHAGVAAAVAGCDGVFHVASPVPASKPADPELEV 154
Query: 353 IAPAVTGTTNVLKACYEAKVRRVVVVSSCGAVYANPIYPKGKVFDEDCWSD 505
+APAV GT NVL+AC+EA VRRVVVVSS A+ NP G V DE+ WSD
Sbjct: 153 VAPAVDGTRNVLRACHEANVRRVVVVSSVAAIAVNPNCRNGVVLDEEWWSD 1
Score = 109 bits (232), Expect(2) = 1e-033
Identities = 56/103 (54%), Positives = 67/103 (65%)
Frame = -1 / +2
Query: 480 TLPFG*IGLAYTAPHEDTTTTRLTFAS*QAFNTLVVPVTAGAMTSTSGLEGRWERTGLAT 301
T P +G A ++TTTTR T AS QA +TL VP TAGA TS+SG G TGLAT
Sbjct: 26 TTPLRQLGFTAMAATDETTTTRRTLASWQALSTLRVPSTAGATTSSSGSAGFDAGTGLAT 205
Query: 300 WKTPSQPATADAMLS*SIRSALRSCNLSSAPSSTLRWAFLLAP 172
WKTPSQPATA A + S SAL S + S+APSS +R A+ +P
Sbjct: 206 WKTPSQPATAAATPAWSSMSALNSRSRSTAPSSAIRCAYFGSP 334
Score = 58.8 bits (122), Expect(2) = 6e-050
Identities = 24/34 (70%), Positives = 27/34 (79%)
Frame = +2 / -2
Query: 71 SVCVTGAGGFVASELVKLLLSRGQYAVRGTVRDP 172
+VCVTGAGGF+AS LV+ LLS G Y V G VRDP
Sbjct: 565 TVCVTGAGGFIASWLVQRLLSSGSYVVHGAVRDP 464
Score = 56.5 bits (117), Expect(2) = 1e-033
Identities = 25/44 (56%), Positives = 29/44 (65%)
Frame = -3 / +2
Query: 187 ILASTRVAHGAADRVLAPGEEELHQLRRDEAASAGHAHALPHRI 56
++ TRVAHGA V A GEE LHQ RRDEA SA HA+ R+
Sbjct: 449 VVLLTRVAHGAVHDVAAAGEEALHQPRRDEATSASHANRRRRRL 580
>gb|CN145669.1|CN145669 WOUND1_34_B03.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_34_B03_A002 5', mRNA sequence
Length = 737
Score = 181 bits (390), Expect(2) = 8e-050
Identities = 79/168 (47%), Positives = 111/168 (66%)
Frame = +2 / +2
Query: 179 SKNAHLKVLEGAEERLQLLKADLMDYDSIASAVAGCEGVFHVASPVLSHRPSNPEVEVIA 358
S+ HL+ ++GA RL+L + DL++ SI AV G GVFHVASPV+ HR +PE E++
Sbjct: 194 SETKHLQAMDGANSRLRLFQMDLLEPASIRPAVEGARGVFHVASPVILHRAQDPENELVE 373
Query: 359 PAVTGTTNVLKACYEAKVRRVVVVSSCGAVYANPIYPKGKVFDEDCWSDEDYCRKKEDWY 538
PA+ GT +VL+A + V RVV+VSS A+ NP +P KV DED W+D + +K + WY
Sbjct: 374 PALKGTLSVLRAAKDCGVGRVVMVSSQTAMVPNPAWPADKVVDEDSWADIEQLKKLQLWY 553
Query: 539 LVSKTLSEREALAFAAKTGLDVVTVCPSLVFGPLMQPTVNLSSEMILK 682
VSKTL+E+ A FA K GL+ V + P+LV GP + P + S +M L+
Sbjct: 554 NVSKTLAEKAAWDFAEKEGLEPVVLNPALVLGPTLTPNIMASLQMFLQ 697
Score = 106 bits (226), Expect = 8e-022
Identities = 67/162 (41%), Positives = 77/162 (47%)
Frame = -1 / -3
Query: 678 RIISLLKFTVGCIKGPNTNDGQTVTTSSPVFAAKARASRSDSVLETKYXXXXXXXXXXXX 499
R I L +G GPNT G + T S P F+AK+ A+ S SVLET Y
Sbjct: 693 RNIWRLAMILGVKVGPNTRAGLSTTGSKPSFSAKSHAAFSASVLETLYQS*SFLSCSMSA 514
Query: 498 XXXXSNTLPFG*IGLAYTAPHEDTTTTRLTFAS*QAFNTLVVPVTAGAMTSTSGLEGRWE 319
S TL G G A +DT TTR T S A TL VP AG+ S SG R
Sbjct: 513 QESSSTTLSAGHAGFGTMAVCDDTMTTRPTPQSFAARRTLSVPFNAGSTNSFSGSCARCR 334
Query: 318 RTGLATWKTPSQPATADAMLS*SIRSALRSCNLSSAPSSTLR 193
TG ATWKTP P+TA M + S RS S + APS R
Sbjct: 333 MTGEATWKTPRAPSTAGRMEAGSRRSIWNSRSREFAPSIACR 208
Score = 38.2 bits (77), Expect(2) = 8e-050
Identities = 15/22 (68%), Positives = 17/22 (77%)
Frame = +2 / +2
Query: 74 VCVTGAGGFVASELVKLLLSRG 139
VCVTG GF+ S LV+LLL RG
Sbjct: 89 VCVTGGSGFIGSWLVRLLLGRG 154
>gb|CW181597.1|CW181597 104_596_11163596_148_36653_070 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11163596, DNA
sequence
Length = 722
Score = 87.2 bits (184), Expect(3) = 1e-048
Identities = 36/55 (65%), Positives = 41/55 (74%)
Frame = +2 / -3
Query: 356 APAVTGTTNVLKACYEAKVRRVVVVSSCGAVYANPIYPKGKVFDEDCWSDEDYCR 520
APAV GT NVL+AC+EA VRRVVVVSS A+ NP G V DE+ WSDED+CR
Sbjct: 693 APAVDGTRNVLRACHEANVRRVVVVSSVAAIAVNPNCRNGVVLDEEWWSDEDFCR 529
Score = 83.1 bits (175), Expect(3) = 1e-048
Identities = 33/53 (62%), Positives = 41/53 (77%)
Frame = +2 / -1
Query: 533 WYLVSKTLSEREALAFAAKTGLDVVTVCPSLVFGPLMQPTVNLSSEMILKYFK 691
WY +SKTL+ER A A+A +TGLDVV+VCPS GPL+QPTVN SS ++ Y K
Sbjct: 365 WYFLSKTLAERAAFAYAKETGLDVVSVCPSWCLGPLLQPTVNNSSLTLIDYLK 207
Score = 69.3 bits (145), Expect(3) = 4e-021
Identities = 29/46 (63%), Positives = 36/46 (78%)
Frame = -1 / +1
Query: 672 ISLLKFTVGCIKGPNTNDGQTVTTSSPVFAAKARASRSDSVLETKY 535
+ LL FTVGC +GP +DGQT+TTSSPV A A+A+RS SVL+ KY
Sbjct: 226 VKLLLFTVGCSRGPRHHDGQTLTTSSPVSLAYAKAARSASVLDRKY 363
Score = 68.4 bits (143), Expect(3) = 1e-048
Identities = 25/46 (54%), Positives = 38/46 (82%)
Frame = +2 / -3
Query: 692 DLETVENVLSNMVDIRDVADALLLTYEKPEASGRYICSSHAIKISD 829
D +TV++ + N+VD+RDVA+AL+L YE PEASGRYIC S+ + +++
Sbjct: 138 DRDTVDDKMKNVVDVRDVAEALVLVYETPEASGRYICRSYPMSMTE 1
Score = 45.5 bits (93), Expect(3) = 4e-021
Identities = 23/48 (47%), Positives = 27/48 (56%)
Frame = -1 / +2
Query: 480 TLPFG*IGLAYTAPHEDTTTTRLTFAS*QAFNTLVVPVTAGAMTSTSG 337
T P +G A ++TTTTR T AS QA +TL VP TAGA G
Sbjct: 569 TTPLRQLGFTAMAATDETTTTRRTLASWQALSTLRVPSTAGARPPAPG 712
Score = 30.9 bits (61), Expect(3) = 4e-021
Identities = 16/46 (34%), Positives = 19/46 (41%)
Frame = -1 / +2
Query: 828 SEIFIACELQMYRPDASGFXXXXXXXXXXXXXXXILLSTFSTVSRS 691
S + I +LQM RP+ASG STVSRS
Sbjct: 2 SVMLIGYDLQM*RPEASGVSYTRTRASATSRTSTTFFILSSTVSRS 139
>gb|AW922257.1|AW922257 DG1_17_G01.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 559
Score = 109 bits (232), Expect(3) = 2e-048
Identities = 44/98 (44%), Positives = 61/98 (62%)
Frame = +2 / +2
Query: 350 VIAPAVTGTTNVLKACYEAKVRRVVVVSSCGAVYANPIYPKGKVFDEDCWSDEDYCRKKE 529
+I PA+ GT V+ A + V+RVV SS G VY NP K D+ CWSD +YC+ +
Sbjct: 263 MIEPAIRGTQYVMTAAADTGVKRVVFTSSIGTVYMNPYREPNKPVDDTCWSDLEYCKNTQ 442
Query: 530 DWYLVSKTLSEREALAFAAKTGLDVVTVCPSLVFGPLM 643
+WY +KT++E+ A A K GLD++ V P LV GPL+
Sbjct: 443 NWYCYAKTVAEQGAWEVARKRGLDLIVVNPVLVLGPLL 556
Score = 88.1 bits (186), Expect(3) = 2e-048
Identities = 35/58 (60%), Positives = 45/58 (77%)
Frame = +2 / +2
Query: 143 YAVRGTVRDPGASKNAHLKVLEGAEERLQLLKADLMDYDSIASAVAGCEGVFHVASPV 316
Y VRGTVR+P KN HL+ L+GA +RL LL+ADL+D +S+ A +GC+GVFH ASPV
Sbjct: 71 YTVRGTVRNPVDPKNDHLRALDGAADRLVLLRADLLDPESLVEAFSGCDGVFHAASPV 244
Score = 35.9 bits (72), Expect(3) = 2e-048
Identities = 15/20 (75%), Positives = 17/20 (85%)
Frame = +2 / +2
Query: 80 VTGAGGFVASELVKLLLSRG 139
VTGAGGF+AS LVK LL +G
Sbjct: 11 VTGAGGFIASWLVKRLLEKG 70
>gb|CW031414.1|CW031414 104_260_10500796_114_30365 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10500796, DNA
sequence
Length = 801
Score = 87.2 bits (184), Expect(4) = 7e-048
Identities = 33/55 (60%), Positives = 44/55 (80%)
Frame = +2 / +3
Query: 527 EDWYLVSKTLSEREALAFAAKTGLDVVTVCPSLVFGPLMQPTVNLSSEMILKYFK 691
++WY +SKT++EREALA+ +TG+DVVTVCP V GPL+QPTVN +S +KY K
Sbjct: 549 QNWYCLSKTVAEREALAYGERTGMDVVTVCPPWVLGPLLQPTVNATSMGFVKYLK 713
Score = 84.5 bits (178), Expect(4) = 7e-048
Identities = 35/56 (62%), Positives = 44/56 (78%)
Frame = +2 / +2
Query: 191 HLKVLEGAEERLQLLKADLMDYDSIASAVAGCEGVFHVASPVLSHRPSNPEVEVIA 358
HL L+GA ERL+L KADL+D S+A+AVAGC+GVFHVASPV + P+NP+V A
Sbjct: 2 HLMALDGAGERLRLFKADLLDRASVAAAVAGCDGVFHVASPVPAVEPTNPDVPASA 169
Score = 71.2 bits (149), Expect(3) = 4e-032
Identities = 34/55 (61%), Positives = 38/55 (69%)
Frame = -1 / -1
Query: 357 AMTSTSGLEGRWERTGLATWKTPSQPATADAMLS*SIRSALRSCNLSSAPSSTLR 193
A+ TSGL G TGLATWKTPSQPATA A L+ S +SAL S S APSS +R
Sbjct: 168 ALAGTSGLVGSTAGTGLATWKTPSQPATAAATLARSNKSALNSRRRSPAPSSAIR 4
Score = 62.9 bits (131), Expect(3) = 4e-032
Identities = 28/51 (54%), Positives = 34/51 (66%)
Frame = -1 / -3
Query: 687 KYLRIISLLKFTVGCIKGPNTNDGQTVTTSSPVFAAKARASRSDSVLETKY 535
+Y L+ FTVGC GP T+ GQTVTTS PV + A ASRS +VLE +Y
Sbjct: 709 RYFTKPMLVAFTVGCSSGPRTHGGQTVTTSIPVLSPYASASRSATVLERQY 557
Score = 49.2 bits (101), Expect(3) = 4e-032
Identities = 23/40 (57%), Positives = 27/40 (67%)
Frame = -1 / -1
Query: 462 IGLAYTAPHEDTTTTRLTFAS*QAFNTLVVPVTAGAMTST 343
+G A TA +DTTTTR T A+ A + VPVTAGAM ST
Sbjct: 375 VGFAITAATDDTTTTRRTLAAWLASSMFCVPVTAGAMIST 256
Score = 45.1 bits (92), Expect(4) = 7e-048
Identities = 19/36 (52%), Positives = 20/36 (55%)
Frame = +2 / +2
Query: 413 RRVVVVSSCGAVYANPIYPKGKVFDEDCWSDEDYCR 520
R VVV S + P V DEDCWSDEDYCR
Sbjct: 329 RVVVVSSVAAVIANPTSIPDDAVADEDCWSDEDYCR 436
Score = 32.7 bits (65), Expect(4) = 7e-048
Identities = 14/30 (46%), Positives = 15/30 (50%)
Frame = +3 / +3
Query: 342 RWRS*LPL*QVQPMC*RLAMRQKLGELWWC 431
RWRS L * + C RLA R WWC
Sbjct: 255 RWRSWLRR*PARRTCWRLATRPTSAASWWC 344
>gb|CN132257.1|CN132257 OX1_5_C03.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_5_C03_A002 3', mRNA sequence
Length = 673
Score = 115 bits (246), Expect(3) = 2e-047
Identities = 39/79 (49%), Positives = 58/79 (73%)
Frame = +2 / +2
Query: 455 NPIYPKGKVFDEDCWSDEDYCRKKEDWYLVSKTLSEREALAFAAKTGLDVVTVCPSLVFG 634
NP +P G++ DE CWSD+++C K E+WY +KT++E AL + K GL+VVTVCP +V G
Sbjct: 8 NPSWPHGRIKDESCWSDKNFCMKNENWYTAAKTIAEETALEYGEKNGLNVVTVCPCIVLG 187
Query: 635 PLMQPTVNLSSEMILKYFK 691
PL+QP +N +SE+++ K
Sbjct: 188 PLLQPLINTTSELLIYIIK 244
Score = 76.7 bits (161), Expect(3) = 2e-047
Identities = 30/56 (53%), Positives = 42/56 (75%)
Frame = +2 / +2
Query: 704 VENVLSNMVDIRDVADALLLTYEKPEASGRYICSSHAIKISDMINILKTMYPSYPY 871
++N+ N+VD+RDVADALLL YEK +SGRYIC+ I +D++ +LK YP+Y Y
Sbjct: 260 MKNLPWNIVDVRDVADALLLVYEKVGSSGRYICAPDRISTNDIVKLLKKSYPNYNY 427
Score = 38.2 bits (77), Expect(3) = 2e-047
Identities = 16/35 (45%), Positives = 24/35 (68%)
Frame = +2 / +2
Query: 902 SVYSSEKLQKLGWTFKPIEESLRDTVESYKAFGIL 1006
S +SEKL+ LGW + +EE+L D+VE ++ G L
Sbjct: 464 SPVTSEKLKSLGWKPRKMEETLLDSVEYFEKAGFL 568
>gb|CN128033.1|CN128033 RHOH1_26_C10.g1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_26_C10_A002 5', mRNA sequence
Length = 297
Score = 191 bits (412), Expect = 2e-047
Identities = 82/95 (86%), Positives = 86/95 (90%)
Frame = +2 / +3
Query: 68 KSVCVTGAGGFVASELVKLLLSRGQYAVRGTVRDPGASKNAHLKVLEGAEERLQLLKADL 247
KSVCVTGAGGF+AS LVKLLLSRGQY VRGTVRDPGASKNAHLK LEGA ERLQLLK DL
Sbjct: 12 KSVCVTGAGGFIASWLVKLLLSRGQYTVRGTVRDPGASKNAHLKALEGAMERLQLLKVDL 191
Query: 248 MDYDSIASAVAGCEGVFHVASPVLSHRPSNPEVEV 352
+DY S+ASA+AGCEGVFHVASPV S R SNPEVEV
Sbjct: 192 LDYSSVASAIAGCEGVFHVASPVPSGRSSNPEVEV 296
Score = 182 bits (392), Expect = 1e-044
Identities = 80/95 (84%), Positives = 81/95 (85%)
Frame = -1 / -3
Query: 351 TSTSGLEGRWERTGLATWKTPSQPATADAMLS*SIRSALRSCNLSSAPSSTLRWAFLLAP 172
TSTSGLE R E TGLATWKTPSQPA ADA L *S +S LRSCNLS APSS LR AFLLAP
Sbjct: 295 TSTSGLEDRPEGTGLATWKTPSQPAIADATLL*SNKSTLRSCNLSIAPSSALR*AFLLAP 116
Query: 171 GSRTVPRTAYWPRERRSFTSSDATKPPAPVTHTLF 67
GSRTVPRT YWPRERRSFTS DA KPPAPVTHTLF
Sbjct: 115 GSRTVPRTVYWPRERRSFTSHDAMKPPAPVTHTLF 11
Score = 181 bits (390), Expect = 2e-044
Identities = 78/98 (79%), Positives = 84/98 (85%)
Frame = -3 / -2
Query: 352 DLHLRVGGSMGKDRASYMEDTLTAGNC*CNAVVVHQISLEKLQPFLSSFQHLEMGILAST 173
DLHLRVGG G++R SYMEDTLTAGNC*CN VV QI+L+KLQPF SSFQ LEM ILAST
Sbjct: 296 DLHLRVGGPTGRNRTSYMEDTLTAGNC*CNTAVVQQINLKKLQPFHSSFQRLEMSILAST 117
Query: 172 RVAHGAADRVLAPGEEELHQLRRDEAASAGHAHALPHR 59
RVAHGAADRVLA GEEELH+ RRDEAA AGHA+AL R
Sbjct: 116 RVAHGAADRVLATGEEELHEPRRDEAARAGHAYALRRR 3
Score = 137 bits (293), Expect = 4e-031
Identities = 59/71 (83%), Positives = 60/71 (84%)
Frame = +3 / +1
Query: 141 NTRSAAPCATLVLARMPISRCWKELRKGCSFSRLI*WTTTALHQQLPAVRVSSM*LALSF 320
NTRSAAPCATLVLARM ISR WKEL KGCSF RLI WTT LHQQLPAVRVSSM*L L
Sbjct: 85 NTRSAAPCATLVLARMLISRRWKELWKGCSFLRLICWTTAVLHQQLPAVRVSSM*LVLFL 264
Query: 321 PIDPPTLRWRS 353
P+ PPTLRWRS
Sbjct: 265 PVGPPTLRWRS 297
Score = 122 bits (261), Expect = 1e-026
Identities = 51/61 (83%), Positives = 53/61 (86%)
Frame = -2 / -1
Query: 353 *PPPQGWRVDGKGQG*LHGRHPHSRQLLMQCCRSPSDQP*EAATFPQLLPAP*DGHSC*H 174
*PPPQGWR D K Q *LHGRHPHSRQLLMQ C SP++QP*EAATFP LLPAP*D HSC*H
Sbjct: 297 *PPPQGWRTDRKEQD*LHGRHPHSRQLLMQHCCSPTNQP*EAATFP*LLPAP*DEHSC*H 118
Query: 173 Q 171
Q
Sbjct: 117 Q 115
Score = 102 bits (218), Expect = 1e-020
Identities = 47/70 (67%), Positives = 48/70 (68%)
Frame = +1 / +2
Query: 61 GAEEXXXXXXXXXXXVGAGEAPPLPGPIRGPRHRARPWC*QECPSQGAGRS*GKVAASQG 240
G EE V A EAPPLP PI GPRHRARPWC*QEC SQGAGRS GKVAAS G
Sbjct: 5 GGEERMRDRRGRLHRVVAREAPPLPWPIHGPRHRARPWC*QECSSQGAGRSYGKVAAS*G 184
Query: 241 *SDGLRQHCI 270
* GL+Q CI
Sbjct: 185 *FVGLQQCCI 214
>gb|BE360688.1|BE360688 DG1_66_C04.b2_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 555
Score = 104 bits (222), Expect(2) = 3e-046
Identities = 45/92 (48%), Positives = 58/92 (63%)
Frame = +2 / +1
Query: 410 VRRVVVVSSCGAVYANPIYPKGKVFDEDCWSDEDYCRKKEDWYLVSKTLSEREALAFAAK 589
VRRVV SS GAV +P V DE CWSD ++C+K +WY K ++E+ A A +
Sbjct: 268 VRRVVFTSSIGAVTMDPSRGPDVVVDESCWSDLEFCKKTRNWYCYGKAVAEQAAWDAARQ 447
Query: 590 TGLDVVTVCPSLVFGPLMQPTVNLSSEMILKY 685
G+D+V V P LV GPL+QPTVN S +LKY
Sbjct: 448 RGVDLVVVNPVLVVGPLLQPTVNASIAHVLKY 543
Score = 103 bits (219), Expect(2) = 3e-046
Identities = 42/62 (67%), Positives = 49/62 (79%)
Frame = +2 / +1
Query: 131 SRGQYAVRGTVRDPGASKNAHLKVLEGAEERLQLLKADLMDYDSIASAVAGCEGVFHVAS 310
+RG Y V+GTVR+P KNAHLK L+GA ERL L KADL+DYD+I AV GC+GVFH AS
Sbjct: 1 ARGGYTVKGTVRNPDDPKNAHLKALDGAAERLILCKADLLDYDAICRAVQGCQGVFHTAS 180
Query: 311 PV 316
PV
Sbjct: 181 PV 186
Score = 73.0 bits (153), Expect(3) = 4e-022
Identities = 36/61 (59%), Positives = 40/61 (65%)
Frame = -1 / -2
Query: 315 TGLATWKTPSQPATADAMLS*SIRSALRSCNLSSAPSSTLRWAFLLAPGSRTVPRTAYWP 136
TG A WKTP QP TA M S*S RSAL+ + S+APSS LR AF + G TVP T Y P
Sbjct: 185 TGEAVWKTPWQPCTARQMAS*SRRSALQRISRSAAPSSALRCAFFGSSGFLTVPLTVYPP 6
Query: 135 R 133
R
Sbjct: 5 R 3
Score = 46.9 bits (96), Expect(3) = 4e-022
Identities = 21/51 (41%), Positives = 30/51 (58%)
Frame = -1 / -2
Query: 687 KYLRIISLLKFTVGCIKGPNTNDGQTVTTSSPVFAAKARASRSDSVLETKY 535
+YL ++L FTVGC GP T+ G T T S+P A + A+ S + L +Y
Sbjct: 545 RYLSTCAMLAFTVGCSSGPTTSTGFTTTRSTPRCRAASHAACSATALP*QY 393
Score = 24.4 bits (47), Expect(3) = 4e-022
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = -1 / -2
Query: 462 IGLAYTAPHEDTTTTRLT 409
+G TAP ED TTR T
Sbjct: 320 LGSMVTAPMEDVNTTRRT 267
>gb|CD431095.1|CD431095 ETH1_6_A10.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_6_A10_A002 5', mRNA sequence
Length = 681
Score = 102 bits (217), Expect(4) = 9e-045
Identities = 42/64 (65%), Positives = 50/64 (78%)
Frame = +2 / +3
Query: 125 LLSRGQYAVRGTVRDPGASKNAHLKVLEGAEERLQLLKADLMDYDSIASAVAGCEGVFHV 304
LL YAVRGTVR+P +KNAHL+ L GA ERL L KADL+DYD++ +A+AGC GVFH
Sbjct: 258 LLLERGYAVRGTVRNPDDAKNAHLRALPGATERLALCKADLLDYDTLRAAIAGCHGVFHT 437
Query: 305 ASPV 316
ASPV
Sbjct: 438 ASPV 449
Score = 62.5 bits (130), Expect(4) = 9e-045
Identities = 24/50 (48%), Positives = 32/50 (64%)
Frame = +2 / +3
Query: 410 VRRVVVVSSCGAVYANPIYPKGKVFDEDCWSDEDYCRKKEDWYLVSKTLS 559
VRRVV+ SS GAV +P V DE CWSD D+C+K ++WY K ++
Sbjct: 531 VRRVVLTSSIGAVAMDPNRSPDAVVDESCWSDLDFCKKTKNWYCYXKAVA 680
Score = 42.8 bits (87), Expect(4) = 9e-045
Identities = 17/23 (73%), Positives = 20/23 (86%)
Frame = +2 / +3
Query: 71 SVCVTGAGGFVASELVKLLLSRG 139
+VCVTGAGG+V S +VKLLL RG
Sbjct: 207 TVCVTGAGGYVGSWIVKLLLERG 275
Score = 31.3 bits (62), Expect(4) = 9e-045
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = +2 / +3
Query: 347 EVIAPAVTGTTNVLKACYEAKVRRVVVVSS 436
E++ PAVTGT ++ A EA R VV++S
Sbjct: 465 EMVEPAVTGTRYIIDAAAEAGTVRRVVLTS 554
>gb|CW203138.1|CW203138 104_629_11185470_116_36913_021 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11185470, DNA
sequence
Length = 621
Score = 177 bits (380), Expect = 4e-043
Identities = 72/116 (62%), Positives = 91/116 (78%)
Frame = +2 / -1
Query: 173 GASKNAHLKVLEGAEERLQLLKADLMDYDSIASAVAGCEGVFHVASPVLSHRPSNPEVEV 352
G K AHL L+GA ERL+L KAD++D+ +A+AVAGC+GVFHVASPV + +P++PE+EV
Sbjct: 492 GDPKYAHLMALDGAVERLRLFKADMLDHAGVAAAVAGCDGVFHVASPVPASKPADPELEV 313
Query: 353 IAPAVTGTTNVLKACYEAKVRRVVVVSSCGAVYANPIYPKGKVFDEDCWSDEDYCR 520
+APAV GT NVL+AC+EA VRRVVVVSS A+ NP G V DE+ WSDED+CR
Sbjct: 312 VAPAVDGTRNVLRACHEANVRRVVVVSSVAAIAVNPNCRNGVVLDEEWWSDEDFCR 145
Score = 109 bits (232), Expect = 1e-022
Identities = 56/103 (54%), Positives = 67/103 (65%)
Frame = -1 / +2
Query: 480 TLPFG*IGLAYTAPHEDTTTTRLTFAS*QAFNTLVVPVTAGAMTSTSGLEGRWERTGLAT 301
T P +G A ++TTTTR T AS QA +TL VP TAGA TS+SG G TGLAT
Sbjct: 185 TTPLRQLGFTAMAATDETTTTRRTLASWQALSTLRVPSTAGATTSSSGSAGFDAGTGLAT 364
Query: 300 WKTPSQPATADAMLS*SIRSALRSCNLSSAPSSTLRWAFLLAP 172
WKTPSQPATA A + S SAL S + S+APSS +R A+ +P
Sbjct: 365 WKTPSQPATAAATPAWSSMSALNSRSRSTAPSSAIRCAYFGSP 493
>gb|CF429087.1|CF429087 PH1_19_G12.g1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_19_G12_A002 5', mRNA sequence
Length = 721
Score = 88.1 bits (186), Expect(3) = 3e-041
Identities = 35/58 (60%), Positives = 45/58 (77%)
Frame = +2 / +2
Query: 143 YAVRGTVRDPGASKNAHLKVLEGAEERLQLLKADLMDYDSIASAVAGCEGVFHVASPV 316
Y VRGTVR+P KN HL+ L+GA +RL LL+ADL+D +S+ A +GC+GVFH ASPV
Sbjct: 329 YTVRGTVRNPVDPKNDHLRALDGAADRLVLLRADLLDPESLVEAFSGCDGVFHAASPV 502
Score = 77.1 bits (162), Expect(3) = 3e-041
Identities = 29/67 (43%), Positives = 40/67 (59%)
Frame = +2 / +2
Query: 350 VIAPAVTGTTNVLKACYEAKVRRVVVVSSCGAVYANPIYPKGKVFDEDCWSDEDYCRKKE 529
+I PA+ GT V+ A + V+RVV SS G VY NP K D+ CWSD +YC+ +
Sbjct: 521 MIEPAIRGTQYVMTAAADTGVKRVVFTSSIGTVYVNPYREPNKPVDDTCWSDLEYCKNTQ 700
Query: 530 DWYLVSK 550
+WY +K
Sbjct: 701 NWYCYAK 721
Score = 44.1 bits (90), Expect(3) = 3e-041
Identities = 18/32 (56%), Positives = 23/32 (71%)
Frame = +2 / +2
Query: 44 PKTMDPVRKSVCVTGAGGFVASELVKLLLSRG 139
P + ++VCVTGAGGF+AS LVK LL +G
Sbjct: 233 PPALSGQGRTVCVTGAGGFIASWLVKRLLEKG 328
>gb|CW269378.1|CW269378 104_740_11401813_116_36229_055 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11401813, DNA
sequence
Length = 689
Score = 97.3 bits (206), Expect(3) = 1e-040
Identities = 40/63 (63%), Positives = 50/63 (79%)
Frame = +2 / +3
Query: 158 TVRDPGASKNAHLKVLEGAEERLQLLKADLMDYDSIASAVAGCEGVFHVASPVLSHRPSN 337
T+ D G KNAHL L+GA ERL+L KADL+D S+A+AVAGC+GVFHVASPV + P+N
Sbjct: 303 TICDAGDPKNAHLMALDGAAERLRLFKADLLDRASVAAAVAGCDGVFHVASPVPAVEPTN 482
Query: 338 PEV 346
P+V
Sbjct: 483 PDV 491
Score = 80.8 bits (170), Expect(3) = 2e-030
Identities = 39/63 (61%), Positives = 45/63 (71%)
Frame = -1 / -2
Query: 345 TSGLEGRWERTGLATWKTPSQPATADAMLS*SIRSALRSCNLSSAPSSTLRWAFLLAPGS 166
TSGL G TGLATWKTPSQPATA A L+ S +SAL S S+APSS +R AFL +P S
Sbjct: 490 TSGLVGSTAGTGLATWKTPSQPATAAATLARSSKSALNSRRRSAAPSSAIRCAFLGSPAS 311
Query: 165 RTV 157
+ V
Sbjct: 310 QIV 302
Score = 65.2 bits (136), Expect(3) = 1e-040
Identities = 28/35 (80%), Positives = 30/35 (85%)
Frame = +2 / +3
Query: 68 KSVCVTGAGGFVASELVKLLLSRGQYAVRGTVRDP 172
K+VCVTGAGGFVAS LV+ LLSRG Y VRGTV DP
Sbjct: 69 KTVCVTGAGGFVASWLVQRLLSRGDYLVRGTVDDP 173
Score = 57.4 bits (119), Expect(3) = 2e-030
Identities = 24/35 (68%), Positives = 27/35 (77%)
Frame = -1 / -2
Query: 171 GSRTVPRTAYWPRERRSFTSSDATKPPAPVTHTLF 67
GS TVPRT P +RR TS +ATKPPAPVTHT+F
Sbjct: 172 GSSTVPRTR*SPLDRRRCTSHEATKPPAPVTHTVF 68
Score = 49.6 bits (102), Expect(3) = 1e-040
Identities = 21/31 (67%), Positives = 26/31 (83%)
Frame = +2 / +3
Query: 344 VEVIAPAVTGTTNVLKACYEAKVRRVVVVSS 436
V+++APAVTGT NVL+ + A VRRVVVVSS
Sbjct: 591 VDILAPAVTGTQNVLEGSHAANVRRVVVVSS 683
Score = 38.6 bits (78), Expect(3) = 2e-030
Identities = 18/31 (58%), Positives = 21/31 (67%)
Frame = -1 / -2
Query: 435 EDTTTTRLTFAS*QAFNTLVVPVTAGAMTST 343
+DTTTTR T A+ +T VPVTAGA ST
Sbjct: 682 DDTTTTRRTLAAWLPSSTFCVPVTAGARMST 590
>gb|BG240109.1|BG240109 OV1_18_A05.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 458
Score = 129 bits (276), Expect(3) = 2e-040
Identities = 54/99 (54%), Positives = 66/99 (66%)
Frame = +2 / +3
Query: 413 RRVVVVSSCGAVYANPIYPKGKVFDEDCWSDEDYCRKKEDWYLVSKTLSEREALAFAAKT 592
R VVV S + P V DEDCWSDEDYCR ++WY +SKT++EREALA+ +T
Sbjct: 102 RVVVVSSVAAVIANPTSIPDDAVADEDCWSDEDYCRATKNWYCLSKTVAEREALAYGERT 281
Query: 593 GLDVVTVCPSLVFGPLMQPTVNLSSEMILKYFKDLETVE 709
G+DVVTVCP V GPL+QPTVN +S +KY K T E
Sbjct: 282 GMDVVTVCPPWVLGPLLQPTVNATSMGFVKYLKGENTDE 398
Score = 68.0 bits (142), Expect(3) = 2e-023
Identities = 31/59 (52%), Positives = 38/59 (64%)
Frame = -1 / -2
Query: 711 FSTVSRSLKYLRIISLLKFTVGCIKGPNTNDGQTVTTSSPVFAAKARASRSDSVLETKY 535
FS+V +Y L+ FTVGC GP T+ GQTVTTS PV + A ASRS +VLE +Y
Sbjct: 400 FSSVFSPFRYFTKPMLVAFTVGCSSGPRTHGGQTVTTSIPVLSPYASASRSATVLERQY 224
Score = 57.4 bits (119), Expect(3) = 2e-023
Identities = 27/45 (60%), Positives = 31/45 (68%)
Frame = -1 / -2
Query: 462 IGLAYTAPHEDTTTTRLTFAS*QAFNTLVVPVTAGAMTSTSGLEG 328
+G A TA +DTTTTR T A+ A + VPVTAGAM STSGL G
Sbjct: 148 VGFAITAATDDTTTTRRTLAAWLASSMFCVPVTAGAMISTSGLVG 14
Score = 40.0 bits (81), Expect(3) = 2e-040
Identities = 16/25 (64%), Positives = 19/25 (76%)
Frame = +2 / +3
Query: 698 ETVENVLSNMVDIRDVADALLLTYE 772
E + NMVD+RDVADAL+LTYE
Sbjct: 384 ENTDEKRRNMVDVRDVADALVLTYE 458
Score = 37.3 bits (75), Expect(3) = 2e-040
Identities = 16/34 (47%), Positives = 17/34 (50%)
Frame = +3 / +1
Query: 330 PPTLRWRS*LPL*QVQPMC*RLAMRQKLGELWWC 431
PPT WRS L * + C RLA R WWC
Sbjct: 16 PPTPMWRSWLRR*PARRTCWRLATRPTSAASWWC 117
Score = 23.5 bits (45), Expect(3) = 2e-023
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = -2 / -3
Query: 548 WKLNTNPPSSCSNPHLTSSLHQ 483
WK +T+ CS+P TSSL +
Sbjct: 237 WKGSTSS*WLCSSPRPTSSLRR 172
>gb|BE359158.1|BE359158 DG1_39_C02.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 548
Score = 139 bits (298), Expect(2) = 3e-040
Identities = 63/112 (56%), Positives = 79/112 (70%)
Frame = +2 / +3
Query: 125 LLSRGQYAVRGTVRDPGASKNAHLKVLEGAEERLQLLKADLMDYDSIASAVAGCEGVFHV 304
LL Y V GTVRD K HLK LE A L++ KADL+DYD++A+AV GC+GV HV
Sbjct: 162 LLLSRGYTVHGTVRDLSDEKTNHLKRLENAAGNLRIFKADLLDYDAMAAAVVGCQGVLHV 341
Query: 305 ASPVLSHRPSNPEVEVIAPAVTGTTNVLKACYEAKVRRVVVVSSCGAVYANP 460
A+PV S ++PE++++ PAVTGTTNVLKA A V+RVVVVSS AV +P
Sbjct: 342 ATPVPSENLTDPELQMLGPAVTGTTNVLKAASAANVQRVVVVSSMVAVEISP 497
Score = 106 bits (226), Expect(2) = 2e-029
Identities = 55/105 (52%), Positives = 65/105 (61%)
Frame = -1 / -2
Query: 462 IGLAYTAPHEDTTTTRLTFAS*QAFNTLVVPVTAGAMTSTSGLEGRWERTGLATWKTPSQ 283
+GL TA +DTTTTR TFA+ A +TLVVPVTAG +SG E TG+ATW+TP
Sbjct: 499 LGLISTATMDDTTTTRWTFAAEAALSTLVVPVTAGPNICSSGSVRFSEGTGVATWRTPWH 320
Query: 282 PATADAMLS*SIRSALRSCNLSSAPSSTLRWAFLLAPGSRTVPRT 148
P TA AM S*S RSAL+ +A S RW + SRTVP T
Sbjct: 319 PTTAAAMAS*SSRSALKILRFPAAFSRRFRWFVFSSLRSRTVPCT 185
Score = 48.3 bits (99), Expect(2) = 3e-040
Identities = 20/23 (86%), Positives = 22/23 (95%)
Frame = +2 / +3
Query: 71 SVCVTGAGGFVASELVKLLLSRG 139
+VCVTGAGGF+AS LVKLLLSRG
Sbjct: 111 TVCVTGAGGFIASWLVKLLLSRG 179
Score = 45.1 bits (92), Expect(2) = 2e-029
Identities = 17/23 (73%), Positives = 19/23 (82%)
Frame = -1 / -2
Query: 138 PRERRSFTSSDATKPPAPVTHTL 70
PRE RSFTS +A PPAPVTHT+
Sbjct: 178 PRESRSFTSHEAMNPPAPVTHTV 110
>gb|CD206423.1|CD206423 HS1_22_G03.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_22_G03_A012 5', mRNA sequence
Length = 511
Score = 139 bits (298), Expect(2) = 3e-040
Identities = 63/112 (56%), Positives = 79/112 (70%)
Frame = +2 / +1
Query: 125 LLSRGQYAVRGTVRDPGASKNAHLKVLEGAEERLQLLKADLMDYDSIASAVAGCEGVFHV 304
LL Y V GTVRD K HLK LE A L++ KADL+DYD++A+AV GC+GV HV
Sbjct: 169 LLLSRGYTVHGTVRDLSDEKTNHLKRLENAAGNLRIFKADLLDYDAMAAAVVGCQGVLHV 348
Query: 305 ASPVLSHRPSNPEVEVIAPAVTGTTNVLKACYEAKVRRVVVVSSCGAVYANP 460
A+PV S ++PE++++ PAVTGTTNVLKA A V+RVVVVSS AV +P
Sbjct: 349 ATPVPSENLTDPELQMLGPAVTGTTNVLKAASAANVQRVVVVSSMVAVEISP 504
Score = 106 bits (226), Expect(2) = 2e-029
Identities = 55/105 (52%), Positives = 65/105 (61%)
Frame = -1 / -3
Query: 462 IGLAYTAPHEDTTTTRLTFAS*QAFNTLVVPVTAGAMTSTSGLEGRWERTGLATWKTPSQ 283
+GL TA +DTTTTR TFA+ A +TLVVPVTAG +SG E TG+ATW+TP
Sbjct: 506 LGLISTATMDDTTTTRWTFAAEAALSTLVVPVTAGPNICSSGSVRFSEGTGVATWRTPWH 327
Query: 282 PATADAMLS*SIRSALRSCNLSSAPSSTLRWAFLLAPGSRTVPRT 148
P TA AM S*S RSAL+ +A S RW + SRTVP T
Sbjct: 326 PTTAAAMAS*SSRSALKILRFPAAFSRRFRWFVFSSLRSRTVPCT 192
Score = 48.3 bits (99), Expect(2) = 3e-040
Identities = 20/23 (86%), Positives = 22/23 (95%)
Frame = +2 / +1
Query: 71 SVCVTGAGGFVASELVKLLLSRG 139
+VCVTGAGGF+AS LVKLLLSRG
Sbjct: 118 TVCVTGAGGFIASWLVKLLLSRG 186
Score = 45.1 bits (92), Expect(2) = 2e-029
Identities = 17/23 (73%), Positives = 19/23 (82%)
Frame = -1 / -3
Query: 138 PRERRSFTSSDATKPPAPVTHTL 70
PRE RSFTS +A PPAPVTHT+
Sbjct: 185 PRESRSFTSHEAMNPPAPVTHTV 117
>gb|BM330954.1|BM330954 PIC1_67_F03.g1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 515
Score = 166 bits (358), Expect = 5e-040
Identities = 66/109 (60%), Positives = 88/109 (80%)
Frame = +2 / +3
Query: 692 DLETVENVLSNMVDIRDVADALLLTYEKPEASGRYICSSHAIKISDMINILKTMYPSYPY 871
D ETV N N+VD+RDVADALLL YE P+ASGRY+C S AI++SD++N LKT YP++ Y
Sbjct: 18 DQETVNNGSMNLVDVRDVADALLLAYENPQASGRYLCCSPAIRVSDIVNTLKTSYPTHTY 197
Query: 872 PKNFVEDDVNSVYSSEKLQKLGWTFKPIEESLRDTVESYKAFGILN*TS 1018
P+ FVE + ++ Y +EKL+KLGWT +P+EE+LRD+V+ Y+A GILN* S
Sbjct: 198 PQKFVEVEGSNTYITEKLRKLGWTSRPMEETLRDSVDCYRALGILN*AS 344
>gb|CW183575.1|CW183575 104_599_11164688_148_36677_024 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11164688, DNA
sequence
Length = 689
Score = 97.3 bits (206), Expect(3) = 9e-040
Identities = 40/63 (63%), Positives = 50/63 (79%)
Frame = +2 / +3
Query: 158 TVRDPGASKNAHLKVLEGAEERLQLLKADLMDYDSIASAVAGCEGVFHVASPVLSHRPSN 337
T+ D G KNAHL L+GA ERL+L KADL+D S+A+AVAGC+GVFHVASPV + P+N
Sbjct: 303 TICDAGDPKNAHLMALDGAAERLRLFKADLLDRASVAAAVAGCDGVFHVASPVPAVEPTN 482
Query: 338 PEV 346
P+V
Sbjct: 483 PDV 491
Score = 80.8 bits (170), Expect(3) = 5e-030
Identities = 39/63 (61%), Positives = 45/63 (71%)
Frame = -1 / -2
Query: 345 TSGLEGRWERTGLATWKTPSQPATADAMLS*SIRSALRSCNLSSAPSSTLRWAFLLAPGS 166
TSGL G TGLATWKTPSQPATA A L+ S +SAL S S+APSS +R AFL +P S
Sbjct: 490 TSGLVGSTAGTGLATWKTPSQPATAAATLARSSKSALNSRRRSAAPSSAIRCAFLGSPAS 311
Query: 165 RTV 157
+ V
Sbjct: 310 QIV 302
Score = 65.2 bits (136), Expect(3) = 9e-040
Identities = 28/35 (80%), Positives = 30/35 (85%)
Frame = +2 / +3
Query: 68 KSVCVTGAGGFVASELVKLLLSRGQYAVRGTVRDP 172
K+VCVTGAGGFVAS LV+ LLSRG Y VRGTV DP
Sbjct: 69 KTVCVTGAGGFVASWLVQRLLSRGDYLVRGTVDDP 173
Score = 57.4 bits (119), Expect(3) = 5e-030
Identities = 24/35 (68%), Positives = 27/35 (77%)
Frame = -1 / -2
Query: 171 GSRTVPRTAYWPRERRSFTSSDATKPPAPVTHTLF 67
GS TVPRT P +RR TS +ATKPPAPVTHT+F
Sbjct: 172 GSSTVPRTR*SPLDRRRCTSHEATKPPAPVTHTVF 68
Score = 46.4 bits (95), Expect(3) = 9e-040
Identities = 20/31 (64%), Positives = 25/31 (80%)
Frame = +2 / +3
Query: 344 VEVIAPAVTGTTNVLKACYEAKVRRVVVVSS 436
V+++APAVTGT NVL+ + A V RVVVVSS
Sbjct: 591 VDILAPAVTGTQNVLEGSHAANVPRVVVVSS 683
Score = 37.7 bits (76), Expect(3) = 5e-030
Identities = 18/31 (58%), Positives = 21/31 (67%)
Frame = -1 / -2
Query: 435 EDTTTTRLTFAS*QAFNTLVVPVTAGAMTST 343
+DTTTTR T A+ +T VPVTAGA ST
Sbjct: 682 DDTTTTRGTLAAWLPSSTFCVPVTAGARMST 590
>gb|BE125424.1|BE125424 DG1_25_G01.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 487
Score = 88.1 bits (186), Expect(3) = 5e-039
Identities = 35/58 (60%), Positives = 45/58 (77%)
Frame = +2 / +2
Query: 143 YAVRGTVRDPGASKNAHLKVLEGAEERLQLLKADLMDYDSIASAVAGCEGVFHVASPV 316
Y VRGTVR+P KN HL+ L+GA +RL LL+ADL+D +S+ A +GC+GVFH ASPV
Sbjct: 71 YTVRGTVRNPVDPKNDHLRALDGAADRLVLLRADLLDPESLVEAFSGCDGVFHAASPV 244
Score = 77.6 bits (163), Expect(3) = 5e-039
Identities = 30/68 (44%), Positives = 40/68 (58%)
Frame = +2 / +2
Query: 350 VIAPAVTGTTNVLKACYEAKVRRVVVVSSCGAVYANPIYPKGKVFDEDCWSDEDYCRKKE 529
+I PA+ GT V+ A + V+RVV SS G VY NP K D+ CWSD +YC +
Sbjct: 263 MIEPAIRGTQYVMTAAADTGVKRVVFTSSIGTVYMNPYREPNKPVDDTCWSDLEYCXNTQ 442
Query: 530 DWYLVSKT 553
+WY +KT
Sbjct: 443 NWYCYAKT 466
Score = 35.9 bits (72), Expect(3) = 5e-039
Identities = 15/20 (75%), Positives = 17/20 (85%)
Frame = +2 / +2
Query: 80 VTGAGGFVASELVKLLLSRG 139
VTGAGGF+AS LVK LL +G
Sbjct: 11 VTGAGGFIASWLVKRLLEKG 70
>gb|CX607102.1|CX607102 ANR1_6_E09.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_6_E09_A002 5', mRNA sequence
Length = 742
Score = 88.1 bits (186), Expect(3) = 7e-039
Identities = 37/58 (63%), Positives = 43/58 (74%)
Frame = +2 / +2
Query: 143 YAVRGTVRDPGASKNAHLKVLEGAEERLQLLKADLMDYDSIASAVAGCEGVFHVASPV 316
Y V+GTV +P KNAHLK L+GA ERL L KADL+DYD+I AV GC+GVF SPV
Sbjct: 269 YTVKGTVWNPDDPKNAHLKGLDGAAERLILCKADLLDYDAICRAVQGCQGVFRTGSPV 442
Score = 72.5 bits (152), Expect(3) = 7e-039
Identities = 33/73 (45%), Positives = 42/73 (57%)
Frame = +2 / +2
Query: 410 VRRVVVVSSCGAVYANPIYPKGKVFDEDCWSDEDYCRKKEDWYLVSKTLSEREALAFAAK 589
VRRVV SS GAV +P V DE CWSD +C+K +WY K ++E+ A A
Sbjct: 524 VRRVVFTSSIGAVTMDPSRGPDVVVDESCWSDL*FCKKTRNWYCYGKAVAEQAAWDAARH 703
Query: 590 TGLDVVTVCPSLV 628
G+D+V V P LV
Sbjct: 704 RGVDLVVVNPVLV 742
Score = 40.5 bits (82), Expect(3) = 7e-039
Identities = 15/24 (62%), Positives = 21/24 (87%)
Frame = +2 / +2
Query: 68 KSVCVTGAGGFVASELVKLLLSRG 139
++VCVTGA G++AS LVK+LL +G
Sbjct: 197 QTVCVTGAAGYIASWLVKMLLEKG 268
>gb|CB925645.1|CB925645 ABA1_22_G02.g1_A012 Abscisic acid-treated seedlings Sorghum bicolor
cDNA clone ABA1_22_G02_A012 5', mRNA sequence
Length = 582
Score = 144 bits (309), Expect(2) = 9e-039
Identities = 62/127 (48%), Positives = 86/127 (67%)
Frame = +2 / +3
Query: 179 SKNAHLKVLEGAEERLQLLKADLMDYDSIASAVAGCEGVFHVASPVLSHRPSNPEVEVIA 358
S+ HL+ ++GA RL+L + DL++ SI AV G GVFHVASPV+ HR +PE E++
Sbjct: 201 SETKHLQAMDGANSRLRLFQMDLLEPASIRPAVEGARGVFHVASPVILHRAQDPENELVE 380
Query: 359 PAVTGTTNVLKACYEAKVRRVVVVSSCGAVYANPIYPKGKVFDEDCWSDEDYCRKKEDWY 538
PA+ GT +VL+A + V RVV+VSS A+ NP +P KV DED W+D + +K + WY
Sbjct: 381 PALKGTLSVLRAAKDCGVGRVVMVSSQTAMVPNPAWPADKVVDEDSWADIEQLKKLQLWY 560
Query: 539 LVSKTLS 559
VSKTL+
Sbjct: 561 NVSKTLA 581
Score = 38.2 bits (77), Expect(2) = 9e-039
Identities = 15/22 (68%), Positives = 17/22 (77%)
Frame = +2 / +3
Query: 74 VCVTGAGGFVASELVKLLLSRG 139
VCVTG GF+ S LV+LLL RG
Sbjct: 96 VCVTGGSGFIGSWLVRLLLGRG 161
>gb|CW332608.1|CW332608 104_830_11481507_116_36036_010 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11481507, DNA
sequence
Length = 712
Score = 95.9 bits (203), Expect(2) = 3e-038
Identities = 39/63 (61%), Positives = 49/63 (77%)
Frame = +2 / -1
Query: 341 EVEVIAPAVTGTTNVLKACYEAKVRRVVVVSSCGAVYANPIYPKGKVFDEDCWSDEDYCR 520
+VE++APAVTGT NVLKA EAKV+RVVVVSS AV NP +P+ +V DE CWSD ++CR
Sbjct: 328 QVELLAPAVTGTMNVLKASSEAKVKRVVVVSSVAAVMVNPGWPQDEVMDEACWSDVEFCR 149
Query: 521 KKE 529
+
Sbjct: 148 TNQ 140
Score = 84.9 bits (179), Expect(2) = 3e-038
Identities = 34/53 (64%), Positives = 43/53 (81%)
Frame = +2 / -3
Query: 173 GASKNAHLKVLEGAEERLQLLKADLMDYDSIASAVAGCEGVFHVASPVLSHRP 331
G +KNAHL ++GA RL+L +ADL+DY S+A+AVAGC+GVFHVASPV S P
Sbjct: 599 GDAKNAHLAAMDGAAARLRLFRADLLDYGSVAAAVAGCDGVFHVASPVPSTYP 441
>emb|AX512962.1| Sequence 7 from Patent WO02063021
Length = 697
Score = 119 bits (254), Expect(2) = 3e-038
Identities = 55/119 (46%), Positives = 76/119 (63%)
Frame = +2 / +1
Query: 80 VTGAGGFVASELVKLLLSRGQYAVRGTVRDPGASKNAHLKVLEGAEERLQLLKADLMDYD 259
VTGA GF+AS L+K LL G + V K AHL L GA+ERLQ+++ADL++
Sbjct: 1 VTGASGFIASWLIKRLLESGYHVVGTVRDPGNHQKTAHLWKLPGAKERLQIVRADLLEEG 180
Query: 260 SIASAVAGCEGVFHVASPVLSHRPSNPEVEVIAPAVTGTTNVLKACYEAKVRRVVVVSS 436
S +AV C+GVFH ASPVL+ S+ + E + PAV GT NVL++C + + VV++S
Sbjct: 181 SFDNAVMDCDGVFHTASPVLAKSDSSSKEETLCPAVNGTLNVLRSCKKNPFLKRVVLTS 357
Score = 61.6 bits (128), Expect(2) = 3e-038
Identities = 24/69 (34%), Positives = 39/69 (56%)
Frame = +2 / +1
Query: 485 DEDCWSDEDYCRKKEDWYLVSKTLSEREALAFAAKTGLDVVTVCPSLVFGPLMQPTVNLS 664
DE WS C K + WY ++K +E+ A FA + +D+VTV PS V GP + + ++
Sbjct: 409 DETTWSSVPLCEKMQLWYALAKVFAEKAAWEFAKENNIDLVTVLPSFVIGPSLSHELCVT 588
Query: 665 SEMILKYFK 691
+ +L F+
Sbjct: 589 ASDVLGLFQ 615
>gb|CN152656.1|CN152656 WOUND1_83_A06.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_83_A06_A002 5', mRNA sequence
Length = 857
Score = 105 bits (223), Expect(3) = 4e-038
Identities = 43/101 (42%), Positives = 64/101 (63%)
Frame = +2 / +1
Query: 485 DEDCWSDEDYCRKKEDWYLVSKTLSEREALAFAAKTGLDVVTVCPSLVFGPLMQPTVNLS 664
DE ++D C K + WY++SKTL+E+ A F+ G ++VT+ P++V GPL+QPT+N S
Sbjct: 553 DETWFTDPQICEKTQQWYVLSKTLAEQAAWKFSRDNGFEIVTINPAMVIGPLLQPTLNTS 732
Query: 665 SEMILKYFKDLETVENVLSNMVDIRDVADALLLTYEKPEAS 787
+E ILK T N V+++DVA A +L YE P A+
Sbjct: 733 AEAILKLINGSSTYPNSSFGWVNVKDVALAHILAYEIPSAN 855
Score = 57.0 bits (118), Expect(3) = 4e-038
Identities = 23/44 (52%), Positives = 30/44 (68%)
Frame = +2 / +1
Query: 182 KNAHLKVLEGAEERLQLLKADLMDYDSIASAVAGCEGVFHVASP 313
K HL L+GA++RL L KA L++ S +AV GC+ VFH ASP
Sbjct: 250 KTLHLTALDGAKDRLHLFKASLLEEGSFDAAVHGCDTVFHTASP 381
Score = 41.8 bits (85), Expect(3) = 4e-038
Identities = 18/42 (42%), Positives = 25/42 (59%)
Frame = +2 / +1
Query: 14 RQREQRRVFKPKTMDPVRKSVCVTGAGGFVASELVKLLLSRG 139
+Q + + M K VCVTGA G++AS +V+LLL RG
Sbjct: 82 KQHKATAMSSAAAMTGAGKVVCVTGASGYIASWIVRLLLDRG 207
>gb|BE363053.1|BE363053 DG1_9_D02.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 509
Score = 131 bits (281), Expect(2) = 6e-038
Identities = 58/102 (56%), Positives = 73/102 (71%)
Frame = +2 / +2
Query: 125 LLSRGQYAVRGTVRDPGASKNAHLKVLEGAEERLQLLKADLMDYDSIASAVAGCEGVFHV 304
LL Y V GTVRD K HLK LE A L++ KADL+DYD++A+AV GC+GV HV
Sbjct: 203 LLLSRGYTVHGTVRDLSDEKTNHLKRLENAAGNLRIFKADLLDYDAMAAAVVGCQGVLHV 382
Query: 305 ASPVLSHRPSNPEVEVIAPAVTGTTNVLKACYEAKVRRVVVV 430
A+PV S ++PE++++ PAVTGTTNVLKA A V+RVVVV
Sbjct: 383 ATPVPSENLTDPELQMLGPAVTGTTNVLKAASAANVQRVVVV 508
Score = 95.9 bits (203), Expect(2) = 2e-026
Identities = 50/94 (53%), Positives = 58/94 (61%)
Frame = -1 / -3
Query: 429 TTTTRLTFAS*QAFNTLVVPVTAGAMTSTSGLEGRWERTGLATWKTPSQPATADAMLS*S 250
TTTTR TFA+ A +TLVVPVTAG +SG E TG+ATW+TP P TA AM S*S
Sbjct: 507 TTTTRWTFAAEAALSTLVVPVTAGPNICSSGSVRFSEGTGVATWRTPWHPTTAAAMAS*S 328
Query: 249 IRSALRSCNLSSAPSSTLRWAFLLAPGSRTVPRT 148
RSAL+ +A S RW + SRTVP T
Sbjct: 327 SRSALKILRFPAAFSRRFRWFVFSSLRSRTVPCT 226
Score = 48.3 bits (99), Expect(2) = 6e-038
Identities = 20/23 (86%), Positives = 22/23 (95%)
Frame = +2 / +2
Query: 71 SVCVTGAGGFVASELVKLLLSRG 139
+VCVTGAGGF+AS LVKLLLSRG
Sbjct: 152 TVCVTGAGGFIASWLVKLLLSRG 220
Score = 45.1 bits (92), Expect(2) = 2e-026
Identities = 17/23 (73%), Positives = 19/23 (82%)
Frame = -1 / -3
Query: 138 PRERRSFTSSDATKPPAPVTHTL 70
PRE RSFTS +A PPAPVTHT+
Sbjct: 219 PRESRSFTSHEAMNPPAPVTHTV 151
>gb|CF432928.1|CF432928 NIT1_19_B11.g1_A002 Nitrogen-deficient seedlings Sorghum bicolor
cDNA clone NIT1_19_B11_A002 5', mRNA sequence
Length = 700
Score = 88.1 bits (186), Expect(3) = 6e-038
Identities = 35/58 (60%), Positives = 45/58 (77%)
Frame = +2 / +2
Query: 143 YAVRGTVRDPGASKNAHLKVLEGAEERLQLLKADLMDYDSIASAVAGCEGVFHVASPV 316
Y VRGTVR+P KN HL+ L+GA +RL LL+ADL+D +S+ A +GC+GVFH ASPV
Sbjct: 332 YTVRGTVRNPVDPKNDHLRALDGAADRLVLLRADLLDPESLVEAFSGCDGVFHAASPV 505
Score = 65.7 bits (137), Expect(3) = 6e-038
Identities = 26/57 (45%), Positives = 34/57 (59%)
Frame = +2 / +2
Query: 350 VIAPAVTGTTNVLKACYEAKVRRVVVVSSCGAVYANPIYPKGKVFDEDCWSDEDYCR 520
+I PA+ GT V+ A + V+RVV SS G VY NP K D+ CWSD +YC+
Sbjct: 524 MIEPAIRGTQYVMTAAADTGVKRVVFTSSIGTVYMNPYREPNKPVDDTCWSDLEYCK 694
Score = 44.1 bits (90), Expect(3) = 6e-038
Identities = 18/32 (56%), Positives = 23/32 (71%)
Frame = +2 / +2
Query: 44 PKTMDPVRKSVCVTGAGGFVASELVKLLLSRG 139
P + ++VCVTGAGGF+AS LVK LL +G
Sbjct: 236 PPALSGQGRTVCVTGAGGFIASWLVKRLLEKG 331
>gb|CF756225.1|CF756225 DSAF1_4_G03.b1_A011 Drought-stressed after flowering Sorghum
bicolor cDNA clone DSAF1_4_G03_A011 5', mRNA sequence
Length = 537
Score = 105 bits (225), Expect(2) = 2e-037
Identities = 45/91 (49%), Positives = 61/91 (67%)
Frame = +2 / +1
Query: 410 VRRVVVVSSCGAVYANPIYPKGKVFDEDCWSDEDYCRKKEDWYLVSKTLSEREALAFAAK 589
VRRVVV SS A+ +P +P G+V DE CW+D DY K WY VSKTL+E+ A FA +
Sbjct: 181 VRRVVVTSSSCAIMPSPGWPAGEVRDERCWTDIDYSEKNGVWYPVSKTLAEKAAWKFAEE 360
Query: 590 TGLDVVTVCPSLVFGPLMQPTVNLSSEMILK 682
G+DVV V P+ V G ++ PT+N S ++L+
Sbjct: 361 NGVDVVVVNPTSVLGTIIPPTINSSMSVLLR 453
Score = 72.5 bits (152), Expect(2) = 2e-037
Identities = 32/67 (47%), Positives = 44/67 (65%)
Frame = +2 / +1
Query: 236 KADLMDYDSIASAVAGCEGVFHVASPVLSHRPSNPEVEVIAPAVTGTTNVLKACYEAKVR 415
+ DL+D ++ A GC GVFH+ASP + S+P+ ++I PAV GT NVL+A EA
Sbjct: 4 RGDLLDGAALIDAARGCSGVFHLASPCIVDAVSDPQKQLIVPAVEGTLNVLRAAKEAGSV 183
Query: 416 RVVVVSS 436
R VVV+S
Sbjct: 184 RRVVVTS 204
>gb|CB925802.1|CB925802 ABA1_23_F05.g1_A012 Abscisic acid-treated seedlings Sorghum bicolor
cDNA clone ABA1_23_F05_A012 5', mRNA sequence
Length = 645
Score = 105 bits (224), Expect(3) = 2e-037
Identities = 44/93 (47%), Positives = 62/93 (66%)
Frame = +2 / +3
Query: 335 NPEVEVIAPAVTGTTNVLKACYEAKVRRVVVVSSCGAVYANPIYPKGKVFDEDCWSDEDY 514
+PE E++ PAV GT NVL+A + V RVV++SS A+ NP +P GKV D+DCW+D +
Sbjct: 363 DPEKELLEPAVKGTLNVLRAAKDCGVGRVVLMSSQAAMVPNPNWPPGKVIDDDCWADVEL 542
Query: 515 CRKKEDWYLVSKTLSEREALAFAAKTGLDVVTV 613
+K + WY VSKTL+E+ A FA K L + +
Sbjct: 543 LKKLQLWYSVSKTLAEKAAWDFAEKEELQIAVL 641
Score = 53.3 bits (110), Expect(3) = 2e-037
Identities = 20/43 (46%), Positives = 31/43 (72%)
Frame = +2 / +3
Query: 191 HLKVLEGAEERLQLLKADLMDYDSIASAVAGCEGVFHVASPVL 319
HL+ + GA+ RL+L + DL+D S+ A+ G GVFH+ASP++
Sbjct: 222 HLQAMGGADARLRLFQMDLVDPASVQPAIEGAHGVFHLASPMI 350
Score = 37.7 bits (76), Expect(3) = 2e-037
Identities = 15/22 (68%), Positives = 17/22 (77%)
Frame = +2 / +3
Query: 74 VCVTGAGGFVASELVKLLLSRG 139
VCVTGA GF+ S LV+ LL RG
Sbjct: 105 VCVTGASGFIGSWLVRCLLDRG 170
>gb|CX614668.1|CX614668 GABR1_15_C04.g1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_15_C04_A002 5', mRNA sequence
Length = 492
Score = 132 bits (282), Expect(2) = 4e-037
Identities = 56/87 (64%), Positives = 70/87 (80%)
Frame = +2 / +1
Query: 71 SVCVTGAGGFVASELVKLLLSRGQYAVRGTVRDPGASKNAHLKVLEGAEERLQLLKADLM 250
+VCVTGAGGF+AS LV+ LL+ G+Y V GTVRDPG + NAHL ++GA RL+L +ADL+
Sbjct: 148 AVCVTGAGGFLASWLVERLLAGGRYVVHGTVRDPGDA*NAHLAAMDGAAARLRLFRADLL 327
Query: 251 DYDSIASAVAGCEGVFHVASPVLSHRP 331
DY S+A+AVAG +GVFHVASPV S P
Sbjct: 328 DYGSVAAAVAGSDGVFHVASPVPSTYP 408
Score = 105 bits (225), Expect(2) = 8e-026
Identities = 50/81 (61%), Positives = 56/81 (69%)
Frame = -1 / -2
Query: 315 TGLATWKTPSQPATADAMLS*SIRSALRSCNLSSAPSSTLRWAFLLAPGSRTVPRTAYWP 136
TG ATWKTPS PATA A L *S +SAL + ++APS R AF +PGSRTVP T Y P
Sbjct: 392 TGDATWKTPSLPATAAATLP*SSKSALNRRSRAAAPSIAARCAF*ASPGSRTVPWTTYRP 213
Query: 135 RERRSFTSSDATKPPAPVTHT 73
RR TS +A KPPAPVTHT
Sbjct: 212 PARRRSTSHEAKKPPAPVTHT 150
Score = 45.1 bits (92), Expect(2) = 4e-037
Identities = 19/26 (73%), Positives = 22/26 (84%)
Frame = +2 / +1
Query: 335 NPEVEVIAPAVTGTTNVLKACYEAKV 412
+PEVE++APAVTGT NVL A EAKV
Sbjct: 415 DPEVELLAPAVTGTLNVLNASSEAKV 492
Score = 33.1 bits (66), Expect(2) = 8e-026
Identities = 16/25 (64%), Positives = 17/25 (68%)
Frame = -1 / -2
Query: 411 TFAS*QAFNTLVVPVTAGAMTSTSG 337
T AS A T VPVTAGA +STSG
Sbjct: 491 TLASELALRTFRVPVTAGASSSTSG 417
>gb|CF428334.1|CF428334 PH1_14_C04.g1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_14_C04_A002 5', mRNA sequence
Length = 659
Score = 105 bits (223), Expect(3) = 1e-036
Identities = 44/90 (48%), Positives = 61/90 (67%)
Frame = +2 / +1
Query: 335 NPEVEVIAPAVTGTTNVLKACYEAKVRRVVVVSSCGAVYANPIYPKGKVFDEDCWSDEDY 514
+PE E++ PAV GT NVL+A + V RVV++SS A+ NP +P GKV D+DCW+D +
Sbjct: 382 DPEKELLEPAVKGTLNVLRAAKDCGVGRVVLMSSQAAMVPNPNWPPGKVIDDDCWADVEL 561
Query: 515 CRKKEDWYLVSKTLSEREALAFAAKTGLDV 604
+K + WY VSKTL+E+ A FA K L +
Sbjct: 562 LKKLQLWYSVSKTLAEKAAWDFAEKEELQI 651
Score = 51.0 bits (105), Expect(3) = 1e-036
Identities = 19/43 (44%), Positives = 30/43 (69%)
Frame = +2 / +1
Query: 191 HLKVLEGAEERLQLLKADLMDYDSIASAVAGCEGVFHVASPVL 319
HL+ + GA+ RL+L + DL+D + A+ G GVFH+ASP++
Sbjct: 241 HLQAMGGADARLRLFQMDLVDPAPVQPAIEGAHGVFHLASPMI 369
Score = 37.7 bits (76), Expect(3) = 1e-036
Identities = 15/22 (68%), Positives = 17/22 (77%)
Frame = +2 / +1
Query: 74 VCVTGAGGFVASELVKLLLSRG 139
VCVTGA GF+ S LV+ LL RG
Sbjct: 124 VCVTGASGFIGSWLVRCLLDRG 189
>gb|CL161050.1|CL161050 104_352_10805442_116_31827_114 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10805442, DNA
sequence
Length = 668
Score = 91.8 bits (194), Expect(2) = 1e-036
Identities = 38/63 (60%), Positives = 47/63 (74%)
Frame = +2 / -3
Query: 341 EVEVIAPAVTGTTNVLKACYEAKVRRVVVVSSCGAVYANPIYPKGKVFDEDCWSDEDYCR 520
+VE++APAVTGT NVL+AC EA+V+RVVVVSS AV P + + KV DE CWSD +CR
Sbjct: 249 QVELVAPAVTGTMNVLRACSEAEVKRVVVVSSLSAVMIKPEWDECKVMDEGCWSDVGHCR 70
Query: 521 KKE 529
E
Sbjct: 69 TTE 61
Score = 86.8 bits (183), Expect(2) = 1e-036
Identities = 36/62 (58%), Positives = 47/62 (75%)
Frame = +2 / -3
Query: 173 GASKNAHLKVLEGAEERLQLLKADLMDYDSIASAVAGCEGVFHVASPVLSHRPSNPEVEV 352
G +KNAHL L+GA ERL+L KADL+D S+A+AVAGC+GVFHVA PV + ++PE
Sbjct: 567 GDAKNAHLLALDGAAERLRLFKADLLDSGSVAAAVAGCDGVFHVACPVPDYALTDPEAPP 388
Query: 353 IA 358
+A
Sbjct: 387 LA 382
>gb|CW494628.1|CW494628 fsbb001f286a06f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f286a06, DNA
sequence
Length = 752
Score = 91.8 bits (194), Expect(2) = 1e-036
Identities = 38/63 (60%), Positives = 47/63 (74%)
Frame = +2 / -1
Query: 341 EVEVIAPAVTGTTNVLKACYEAKVRRVVVVSSCGAVYANPIYPKGKVFDEDCWSDEDYCR 520
+VE++APAVTGT NVL+AC EA+V+RVVVVSS AV P + + KV DE CWSD +CR
Sbjct: 374 QVELVAPAVTGTMNVLRACSEAEVKRVVVVSSLSAVMIKPEWDECKVMDEGCWSDVGHCR 195
Query: 521 KKE 529
E
Sbjct: 194 TTE 186
Score = 86.8 bits (183), Expect(2) = 1e-036
Identities = 36/62 (58%), Positives = 47/62 (75%)
Frame = +2 / -1
Query: 173 GASKNAHLKVLEGAEERLQLLKADLMDYDSIASAVAGCEGVFHVASPVLSHRPSNPEVEV 352
G +KNAHL L+GA ERL+L KADL+D S+A+AVAGC+GVFHVA PV + ++PE
Sbjct: 692 GDAKNAHLLALDGAAERLRLFKADLLDSGSVAAAVAGCDGVFHVACPVPDYALTDPEAPP 513
Query: 353 IA 358
+A
Sbjct: 512 LA 507
>gb|CL178820.1|CL178820 104_387_10894861_116_31906_157 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10894861, DNA
sequence
Length = 746
Score = 88.6 bits (187), Expect(2) = 2e-035
Identities = 33/73 (45%), Positives = 53/73 (72%)
Frame = +2 / +3
Query: 692 DLETVENVLSNMVDIRDVADALLLTYEKPEASGRYICSSHAIKISDMINILKTMYPSYPY 871
D +TV++ + N+VD+RDVA+AL+L YE PEASGRYIC S+ + ++++++I+K+ YP+ Y
Sbjct: 288 DRDTVDDKMKNVVDVRDVAEALVLVYETPEASGRYICRSYPMSMTEILDIIKSFYPNLSY 467
Query: 872 PKNFVEDDVNSVY 910
P + N Y
Sbjct: 468 PNK*ASNS*NH*Y 506
Score = 83.1 bits (175), Expect(2) = 2e-035
Identities = 33/53 (62%), Positives = 41/53 (77%)
Frame = +2 / +1
Query: 533 WYLVSKTLSEREALAFAAKTGLDVVTVCPSLVFGPLMQPTVNLSSEMILKYFK 691
WY +SKTL+ER A A+A +TGLDVV+VCPS GPL+QPTVN SS ++ Y K
Sbjct: 61 WYFLSKTLAERAAFAYAKETGLDVVSVCPSWCLGPLLQPTVNNSSLTLIDYLK 219
>gb|CW192819.1|CW192819 104_615_11179234_148_36775_041 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11179234, DNA
sequence
Length = 666
Score = 88.6 bits (187), Expect(2) = 2e-035
Identities = 33/73 (45%), Positives = 53/73 (72%)
Frame = +2 / +1
Query: 692 DLETVENVLSNMVDIRDVADALLLTYEKPEASGRYICSSHAIKISDMINILKTMYPSYPY 871
D +TV++ + N+VD+RDVA+AL+L YE PEASGRYIC S+ + ++++++I+K+ YP+ Y
Sbjct: 319 DRDTVDDKMKNVVDVRDVAEALVLVYETPEASGRYICRSYPMSMTEILDIIKSFYPNLSY 498
Query: 872 PKNFVEDDVNSVY 910
P + N Y
Sbjct: 499 PNK*ASNS*NH*Y 537
Score = 83.1 bits (175), Expect(2) = 2e-035
Identities = 33/53 (62%), Positives = 41/53 (77%)
Frame = +2 / +2
Query: 533 WYLVSKTLSEREALAFAAKTGLDVVTVCPSLVFGPLMQPTVNLSSEMILKYFK 691
WY +SKTL+ER A A+A +TGLDVV+VCPS GPL+QPTVN SS ++ Y K
Sbjct: 92 WYFLSKTLAERAAFAYAKETGLDVVSVCPSWCLGPLLQPTVNNSSLTLIDYLK 250
>gb|BE357273.1|BE357273 DG1_148_D02.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 548
Score = 122 bits (261), Expect(2) = 8e-035
Identities = 51/98 (52%), Positives = 70/98 (71%)
Frame = +2 / +2
Query: 125 LLSRGQYAVRGTVRDPGASKNAHLKVLEGAEERLQLLKADLMDYDSIASAVAGCEGVFHV 304
LL Y V TVRDPG KNAHL LEGA E L+L KA+++D +++A+AV+GC GVFH+
Sbjct: 254 LLLSRGYTVHATVRDPGDPKNAHLGRLEGASENLRLFKANVLDQNALAAAVSGCRGVFHL 433
Query: 305 ASPVLSHRPSNPEVEVIAPAVTGTTNVLKACYEAKVRR 418
A PV + + +PE EV+APAV GT N+L+AC +++
Sbjct: 434 ACPVPTDKVLDPESEVLAPAVQGTLNILQACSNNNIQK 547
Score = 80.3 bits (169), Expect(2) = 4e-021
Identities = 44/83 (53%), Positives = 45/83 (54%)
Frame = -1 / -3
Query: 396 QAFNTLVVPVTAGAMTSTSGLEGRWERTGLATWKTPSQPATADAMLS*SIRSALRSCNLS 217
QA VP TAGA TS SG TG A WKTP P TA A S AL S S
Sbjct: 525 QA*RMFKVPCTAGASTSDSGSRTLSVGTGQARWKTPRHPETAAASAFWSSTLALNSRRFS 346
Query: 216 SAPSSTLRWAFLLAPGSRTVPRT 148
APSS RWAFL +PGSRTV T
Sbjct: 345 EAPSSRPRWAFLGSPGSRTVACT 277
Score = 46.9 bits (96), Expect(2) = 8e-035
Identities = 19/23 (82%), Positives = 22/23 (95%)
Frame = +2 / +2
Query: 71 SVCVTGAGGFVASELVKLLLSRG 139
+VCVTGAGG++AS LVKLLLSRG
Sbjct: 203 TVCVTGAGGYIASWLVKLLLSRG 271
Score = 43.2 bits (88), Expect(2) = 4e-021
Identities = 17/23 (73%), Positives = 19/23 (82%)
Frame = -1 / -3
Query: 138 PRERRSFTSSDATKPPAPVTHTL 70
PRERRS TS +A PPAPVTHT+
Sbjct: 270 PRERRSLTSHEAM*PPAPVTHTV 202
>gb|BM324287.1|BM324287 PIC1_26_E07.b1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 459
Score = 130 bits (278), Expect(2) = 8e-034
Identities = 53/116 (45%), Positives = 78/116 (67%)
Frame = +2 / +1
Query: 335 NPEVEVIAPAVTGTTNVLKACYEAKVRRVVVVSSCGAVYANPIYPKGKVFDEDCWSDEDY 514
+PE E++ PAV GT NVL+A + V RVV++SS A+ NP +P GKV D+DCW+D +
Sbjct: 103 DPEKELLEPAVKGTLNVLRAAKDCGVGRVVLMSSQAAMVPNPNWPPGKVIDDDCWADVEL 282
Query: 515 CRKKEDWYLVSKTLSEREALAFAAKTGLDVVTVCPSLVFGPLMQPTVNLSSEMILK 682
+K + WY VSKTL+E+ A FA K L + + P +V GP++ P+VN S ++L+
Sbjct: 283 LKKLQLWYSVSKTLAEKAAWDFAEKEELQIAVLNPGMVLGPMLTPSVNASLRLLLQ 450
Score = 35.9 bits (72), Expect(2) = 8e-034
Identities = 13/26 (50%), Positives = 19/26 (73%)
Frame = +2 / +1
Query: 242 DLMDYDSIASAVAGCEGVFHVASPVL 319
DL+D S+ A+ G GVFH+ASP++
Sbjct: 13 DLVDPASVQPAIEGAHGVFHLASPMI 90
>gb|CW261808.1|CW261808 104_729_11229713_148_35203_077 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11229713, DNA
sequence
Length = 677
Score = 83.1 bits (175), Expect(2) = 4e-033
Identities = 31/58 (53%), Positives = 45/58 (77%)
Frame = +2 / +2
Query: 698 ETVENVLSNMVDIRDVADALLLTYEKPEASGRYICSSHAIKISDMINILKTMYPSYPY 871
+ V N L ++VD+RD+ADALLL YE PEA+GR+IC+ H I D++++LK+MYP P+
Sbjct: 314 DLVRNKLWHVVDVRDLADALLLLYEVPEAAGRHICAPHVISARDLLDLLKSMYPDNPF 487
Score = 80.8 bits (170), Expect(2) = 4e-033
Identities = 31/58 (53%), Positives = 43/58 (74%)
Frame = +2 / +2
Query: 527 EDWYLVSKTLSEREALAFAAKTGLDVVTVCPSLVFGPLMQPTVNLSSEMILKYFKDLE 700
+ WY V+K +SE ALA+ +TGLDVVT+ P LVFGPL+QPTVN S + ++ + K L+
Sbjct: 53 QSWYPVAKIISEEAALAYGRQTGLDVVTINPGLVFGPLLQPTVNASIQFLIYFLKGLD 226
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,542,469,265
Number of Sequences: 832831
Number of extensions: 23208913
Number of successful extensions: 150395
Number of sequences better than 1.0e-020: 156
length of database: 163,786,556
effective HSP length: 55
effective length of database: 117,980,851
effective search space used: 42001182956
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)