TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 131537.2.723
(715 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|DN551859.1|DN551859 pSPR-RT-MR-H1_C07_C263 pSPR Sorghum ... 563 e-160
gb|CD228245.1|CD228245 CCC1_6_E11.g1_A007 Callus culture/ce... 394 e-109
gb|CN134509.1|CN134509 OX1_26_F12.g1_A002 Oxidatively-stres... 376 e-103
gb|BF421433.1|BF421433 FM1_8_F10.b1_A003 Floral-Induced Mer... 258 9e-068
gb|DN551908.1|DN551908 pSPR-RT-MR-H2_E02_C027 pSPR Sorghum ... 238 7e-062
gb|CW272375.1|CW272375 104_744_11403400_148_36227_054 Sorgh... 84 9e-055
gb|BI140650.1|BI140650 IP1_52_A07.b1_A002 Immature pannicle... 192 2e-054
gb|CW041428.1|CW041428 104_274_10506544_116_30434 Sorghum m... 97 1e-053
gb|CW041429.1|CW041429 104_274_10506544_116_30484 Sorghum m... 97 1e-053
gb|CF482007.1|CF482007 POL1_76_B05.b1_A002 Pollen Sorghum b... 199 4e-050
gb|CF488045.1|CF488045 POL1_47_A08.g1_A002 Pollen Sorghum b... 111 8e-048
gb|DN551899.1|DN551899 pSPR-RT-MR-H1_B06_S170 pSPR Sorghum ... 110 6e-041
gb|BE593425.1|BE593425 WS1_97_F09.b1_A002 Water-stressed 1 ... 110 6e-041
gb|BG649190.1|BG649190 EM1_77_G11.g1_A002 Embryo 1 (EM1) So... 165 6e-040
gb|BF176662.1|BF176662 EM1_1_E11.g1_A002 Embryo 1 (EM1) Sor... 159 4e-038
gb|CF428487.1|CF428487 PH1_15_D10.g1_A002 Phosphorous-defic... 106 4e-035
gb|CW083677.1|CW083677 104_426_10945316_116_32439_080 Sorgh... 101 8e-035
gb|CN134426.1|CN134426 OX1_26_F12.b1_A002 Oxidatively-stres... 146 3e-034
gb|BF421511.1|BF421511 FM1_8_F10.g1_A003 Floral-Induced Mer... 144 1e-033
gb|CL187585.1|CL187585 104_403_10900988_114_32462_076 Sorgh... 75 1e-032
gb|BF587888.1|BF587888 FM1_34_C12.g1_A003 Floral-Induced Me... 141 1e-032
gb|BG412421.1|BG412421 OV2_33_H08.g1_A002 Ovary 2 (OV2) Sor... 141 1e-032
gb|BG948185.1|BG948185 IP1_10_D07.g1_A002 Immature pannicle... 141 1e-032
gb|CD228133.1|CD228133 CCC1_6_E11.b1_A007 Callus culture/ce... 138 1e-031
gb|BI074812.1|BI074812 IP1_16_G03.b1_A002 Immature pannicle... 114 5e-031
gb|CW194330.1|CW194330 104_617_11180039_148_36789_088 Sorgh... 95 7e-031
gb|AW564805.1|AW564805 LG1_301_F09.b1_A002 Light Grown 1 (L... 113 4e-029
gb|AW564753.1|AW564753 LG1_301_D09.b1_A002 Light Grown 1 (L... 113 4e-029
gb|BI245776.1|BI245776 IP1_64_C06.g1_A002 Immature pannicle... 128 7e-029
gb|BG605739.1|BG605739 RHIZ2_80_H09.g1_A003 Rhizome2 (RHIZ2... 126 5e-028
gb|CW066457.1|CW066457 104_313_10523697_114_30148 Sorghum m... 51 9e-028
gb|CW288849.1|CW288849 104_767_11412169_148_35539_007 Sorgh... 54 1e-027
gb|BG103497.1|BG103497 RHIZ2_37_C08.g1_A003 Rhizome2 (RHIZ2... 123 3e-027
gb|CW030108.1|CW030108 104_258_10500065_114_30403 Sorghum m... 52 1e-026
gb|CW140518.1|CW140518 104_531_11135826_116_34925_077 Sorgh... 68 2e-026
gb|CW061656.1|CW061656 104_305_10520518_114_30152 Sorghum m... 75 2e-026
gb|BF585842.1|BF585842 FM1_25_B08.g1_A003 Floral-Induced Me... 120 3e-026
gb|CW288848.1|CW288848 104_767_11412169_116_35543_007 Sorgh... 75 4e-026
gb|CW272374.1|CW272374 104_744_11403400_116_36228_054 Sorgh... 105 5e-025
gb|CW452022.1|CW452022 fsbb001f192f20k0 Sorghum methylation... 73 6e-025
gb|CW356188.1|CW356188 fsbb001f021c08k0 Sorghum methylation... 95 1e-024
gb|BE359363.1|BE359363 DG1_40_D01.g1_A002 Dark Grown 1 (DG1... 114 1e-024
gb|BF587838.1|BF587838 FM1_33_F06.g1_A003 Floral-Induced Me... 114 1e-024
gb|BM324187.1|BM324187 PIC1_25_D06.b1_A002 Pathogen-infecte... 95 2e-024
gb|CF485232.1|CF485232 POL1_30_F05.b1_A002 Pollen Sorghum b... 113 2e-024
gb|CW410447.1|CW410447 fsbb001f105d07f0 Sorghum methylation... 97 6e-024
gb|CW410448.1|CW410448 fsbb001f105d07k0 Sorghum methylation... 97 6e-024
gb|CF487966.1|CF487966 POL1_47_A08.b1_A002 Pollen Sorghum b... 111 1e-023
gb|BG103154.1|BG103154 RHIZ2_18_G08.g1_A003 Rhizome2 (RHIZ2... 110 2e-023
gb|CW257089.1|CW257089 104_722_11227151_148_35148_090 Sorgh... 54 3e-023
gb|CL187586.1|CL187586 104_403_10900988_116_32466_076 Sorgh... 67 5e-023
gb|CW140519.1|CW140519 104_531_11135826_148_34921_077 Sorgh... 67 5e-023
gb|BZ336052.1|BZ336052 hz28d11.b1 WGS-SbicolorF (JM107 adap... 54 7e-023
gb|CW484158.1|CW484158 fsbb001f246c16f0 Sorghum methylation... 95 1e-022
gb|CW190349.1|CW190349 104_612_11174456_116_36836_032 Sorgh... 95 2e-022
gb|BE593115.1|BE593115 WS1_97_F09.g1_A002 Water-stressed 1 ... 105 1e-021
gb|CF485311.1|CF485311 POL1_30_F05.g1_A002 Pollen Sorghum b... 95 1e-021
gb|CW089146.1|CW089146 104_434_10948530_115_32585_073 Sorgh... 52 2e-020
gb|CW135737.1|CW135737 104_520_11118005_116_34836_023 Sorgh... 100 2e-020
gb|BG463628.1|BG463628 EM1_50_A05.g1_A002 Embryo 1 (EM1) So... 98 1e-019
gb|CW231166.1|CW231166 104_680_11210980_116_37342_010 Sorgh... 97 3e-019
gb|BG412718.1|BG412718 OV2_33_H08.b1_A002 Ovary 2 (OV2) Sor... 95 1e-018
gb|BE595663.1|BE595663 PI1_55_A07.g1_A002 Pathogen induced ... 95 2e-018
gb|BG052653.1|BG052653 RHIZ2_27_F12.g1_A003 Rhizome2 (RHIZ2... 93 4e-018
gb|BG241626.1|BG241626 RHIZ2_17_H06.g1_A003 Rhizome2 (RHIZ2... 93 4e-018
gb|CW409275.1|CW409275 fsbb001f103i06k0 Sorghum methylation... 48 2e-017
gb|BF177091.1|BF177091 EM1_3_E09.g1_A002 Embryo 1 (EM1) Sor... 90 4e-017
gb|CW099174.1|CW099174 104_466_11003407_148_34378_032 Sorgh... 58 6e-017
gb|CW182991.1|CW182991 104_598_11164376_116_36666_020 Sorgh... 58 6e-017
gb|BM328689.1|BM328689 PIC1_25_D06.g1_A002 Pathogen-infecte... 89 7e-017
gb|BG933514.1|BG933514 WS1_4_C11.b1_A002 Water-stressed 1 (... 71 2e-016
gb|CW178747.1|CW178747 104_592_11159733_116_36617_085 Sorgh... 57 4e-016
gb|CW168693.1|CW168693 104_578_11154280_148_36605_058 Sorgh... 86 6e-016
gb|CW382183.1|CW382183 fsbb001f063p06k0 Sorghum methylation... 86 6e-016
gb|CW330844.1|CW330844 104_827_11480592_116_36010_082 Sorgh... 56 9e-016
gb|CL148074.1|CL148074 104_327_10592836_116_31781_344 Sorgh... 56 9e-016
gb|CW157762.1|CW157762 104_561_11147696_148_36393_028 Sorgh... 56 9e-016
gb|CW135738.1|CW135738 104_520_11118005_148_34832_023 Sorgh... 39 2e-015
gb|BZ366524.1|BZ366524 ic97f02.g1 WGS-SbicolorF (JM107 adap... 52 3e-015
gb|BF656550.1|BF656550 FM1_51_D09.g1_A003 Floral-Induced Me... 83 6e-015
gb|CW205365.1|CW205365 104_633_11187029_116_36925_019 Sorgh... 50 4e-014
gb|BF481845.1|BF481845 FM1_22_B03.g1_A003 Floral-Induced Me... 79 1e-013
gb|CF485335.1|CF485335 POL1_30_H08.g1_A002 Pollen Sorghum b... 46 2e-013
gb|CW411648.1|CW411648 fsbb001f106o17k0 Sorghum methylation... 64 4e-013
gb|BG557100.1|BG557100 EM1_42_F06.g1_A002 Embryo 1 (EM1) So... 76 5e-013
gb|BI351076.1|BI351076 IP1_69_E06.g1_A002 Immature pannicle... 76 5e-013
gb|CW030109.1|CW030109 104_258_10500065_116_30404 Sorghum m... 38 7e-013
gb|BZ347855.1|BZ347855 ho35g11.g1 WGS-SbicolorF (JM107 adap... 57 1e-012
gb|BZ336053.1|BZ336053 hz28d11.g1 WGS-SbicolorF (JM107 adap... 75 1e-012
gb|CW051010.1|CW051010 104_291_10514996_114_30192 Sorghum m... 75 1e-012
gb|CW061657.1|CW061657 104_305_10520518_115_30153 Sorghum m... 75 1e-012
gb|CF485254.1|CF485254 POL1_30_H08.b1_A002 Pollen Sorghum b... 74 2e-012
gb|CW443602.1|CW443602 fsbb001f163m16f0 Sorghum methylation... 73 5e-012
gb|CF488341.1|CF488341 POL1_49_G04.b1_A002 Pollen Sorghum b... 72 9e-012
gb|CW456784.1|CW456784 fsbb001f202e21f0 Sorghum methylation... 72 1e-011
gb|BE595412.1|BE595412 PI1_55_A07.b1_A002 Pathogen induced ... 71 2e-011
gb|BF655915.1|BF655915 FM1_42_D11.g1_A003 Floral-Induced Me... 71 2e-011
gb|CF770658.1|CF770658 DSBF1_9_B10.b1_A010 Drought-stressed... 71 2e-011
gb|CL174610.1|CL174610 104_379_10891763_116_31769_131 Sorgh... 70 4e-011
gb|CW066459.1|CW066459 104_313_10523697_115_30149 Sorghum m... 68 2e-010
gb|CW407009.1|CW407009 fsbb001f100e16k0 Sorghum methylation... 64 3e-009
gb|CW447924.1|CW447924 fsbb001f181e09k0 Sorghum methylation... 57 3e-009
gb|BG355831.1|BG355831 EM1_17_C03.g1_A002 Embryo 1 (EM1) So... 63 4e-009
gb|BF655982.1|BF655982 FM1_42_D11.b1_A003 Floral-Induced Me... 61 2e-008
gb|CW030073.1|CW030073 104_258_10500040_116_30404 Sorghum m... 61 2e-008
gb|CW433307.1|CW433307 fsbb001f148h14k0 Sorghum methylation... 61 2e-008
gb|CL173508.1|CL173508 104_377_10890920_116_31793_056 Sorgh... 41 3e-008
gb|CW253696.1|CW253696 104_717_11225238_148_35107_023 Sorgh... 60 3e-008
gb|CW066458.1|CW066458 104_313_10523697_115_30147 Sorghum m... 58 1e-007
gb|CW102127.1|CW102127 104_470_11011172_116_34417_076 Sorgh... 58 1e-007
gb|BG050659.1|BG050659 FM1_71_B03.g1_A003 Floral-Induced Me... 58 1e-007
gb|CW102128.1|CW102128 104_470_11011172_148_34413_076 Sorgh... 42 3e-007
gb|BZ342950.1|BZ342950 ho31g07.b1 WGS-SbicolorF (JM107 adap... 56 6e-007
gb|BG463556.1|BG463556 EM1_50_A05.b1_A002 Embryo 1 (EM1) So... 56 6e-007
gb|CW119121.1|CW119121 104_495_11108581_116_34626_049 Sorgh... 35 1e-006
gb|CL185414.1|CL185414 104_399_10899512_116_32395_024 Sorgh... 38 1e-006
gb|CW302363.1|CW302363 104_786_11464680_116_35663_088 Sorgh... 39 1e-006
gb|CW214679.1|CW214679 104_646_11194141_116_37048_051 Sorgh... 42 1e-006
gb|CW140185.1|CW140185 104_530_11135648_148_34919_022 Sorgh... 55 2e-006
gb|CW243936.1|CW243936 104_704_11220319_148_37582_022 Sorgh... 55 2e-006
gb|CW358042.1|CW358042 fsbb001f024p12f0 Sorghum methylation... 55 2e-006
gb|CW358043.1|CW358043 fsbb001f024p12k0 Sorghum methylation... 55 2e-006
gb|CW362575.1|CW362575 fsbb001f033k24f0 Sorghum methylation... 55 2e-006
gb|CW392215.1|CW392215 fsbb001f078l18k0 Sorghum methylation... 55 2e-006
gb|CW433903.1|CW433903 fsbb001f149f13k0 Sorghum methylation... 55 2e-006
gb|CW449999.1|CW449999 fsbb001f188g17f0 Sorghum methylation... 55 2e-006
gb|BG051562.1|BG051562 FM1_58_A07.g1_A003 Floral-Induced Me... 55 2e-006
gb|CW478346.1|CW478346 fsbb001f236c23k0 Sorghum methylation... 32 7e-006
gb|BZ346558.1|BZ346558 hv20d11.b1 WGS-SbicolorF (JM107 adap... 39 8e-006
gb|CW099173.1|CW099173 104_466_11003407_116_34382_032 Sorgh... 39 8e-006
gb|CW178748.1|CW178748 104_592_11159733_148_36618_085 Sorgh... 51 2e-005
gb|CW468737.1|CW468737 fsbb001f221b11k0 Sorghum methylation... 51 2e-005
gb|CW380871.1|CW380871 fsbb001f061o24k0 Sorghum methylation... 35 2e-005
gb|CW163008.1|CW163008 104_570_11151237_116_36445_087 Sorgh... 51 3e-005
gb|CW301269.1|CW301269 104_785_11464112_148_36268_032 Sorgh... 51 3e-005
gb|CL162485.1|CL162485 104_354_10806435_116_31831_339 Sorgh... 50 4e-005
gb|CF758348.1|CF758348 DSAF1_30_F09.g1_A011 Drought-stresse... 50 4e-005
gb|BZ366523.1|BZ366523 ic97f02.b1 WGS-SbicolorF (JM107 adap... 32 5e-005
gb|BF704780.1|BF704780 FM1_51_D09.b1_A003 Floral-Induced Me... 37 7e-005
gb|CW482935.1|CW482935 fsbb001f244e18f0 Sorghum methylation... 48 1e-004
gb|CF770746.1|CF770746 DSBF1_9_B10.g1_A010 Drought-stressed... 48 1e-004
gb|BG557163.1|BG557163 EM1_43_D03.g1_A002 Embryo 1 (EM1) So... 47 2e-004
gb|CW249691.1|CW249691 104_711_11222983_148_35045_022 Sorgh... 46 6e-004
gb|CW481997.1|CW481997 fsbb001f241n20k0 Sorghum methylation... 38 8e-004
gb|CW205366.1|CW205366 104_633_11187029_148_36926_019 Sorgh... 32 8e-004
gb|CW248569.1|CW248569 104_710_11222371_148_35033_080 Sorgh... 44 0.002
gb|CW096175.1|CW096175 104_461_11001747_116_34332_004 Sorgh... 44 0.003
gb|CW128073.1|CW128073 104_509_11113800_116_34745_088 Sorgh... 44 0.003
gb|CW302364.1|CW302364 104_786_11464680_148_35667_088 Sorgh... 44 0.003
gb|CW435603.1|CW435603 fsbb001f151n10f0 Sorghum methylation... 44 0.003
gb|CW197942.1|CW197942 104_622_11181949_116_36825_055 Sorgh... 32 0.004
gb|BG102640.1|BG102640 RHIZ2_35_E02.g1_A003 Rhizome2 (RHIZ2... 43 0.004
gb|CW051011.1|CW051011 104_291_10514996_115_30196 Sorghum m... 42 0.011
gb|BZ343186.1|BZ343186 ho35g11.b2 WGS-SbicolorF (JM107 adap... 39 0.074
gb|BF422058.1|BF422058 FM1_12_D07.g1_A003 Floral-Induced Me... 39 0.10
gb|CW046283.1|CW046283 104_283_10510095_115_30139 Sorghum m... 38 0.14
gb|CW243935.1|CW243935 104_704_11220319_116_37581_022 Sorgh... 38 0.14
gb|CW478345.1|CW478345 fsbb001f236c23f0 Sorghum methylation... 38 0.19
gb|CW140184.1|CW140184 104_530_11135648_116_34915_022 Sorgh... 37 0.26
gb|CW396612.1|CW396612 fsbb001f085c03k0 Sorghum methylation... 37 0.26
gb|CW450000.1|CW450000 fsbb001f188g17k0 Sorghum methylation... 37 0.26
gb|BE366757.1|BE366757 PI1_3_G03.g1_A002 Pathogen induced 1... 35 0.94
gb|CL185413.1|CL185413 104_399_10899512_114_32391_024 Sorgh... 35 1.3
gb|CW194329.1|CW194329 104_617_11180039_116_36785_088 Sorgh... 35 1.3
gb|CW249690.1|CW249690 104_711_11222983_116_35041_022 Sorgh... 35 1.3
gb|CF482822.1|CF482822 POL1_9_H11.b1_A002 Pollen Sorghum bi... 35 1.3
gb|BG054168.1|BG054168 OV2_2_B05.b1_A002 Ovary 2 (OV2) Sorg... 30 1.6
gb|CW411647.1|CW411647 fsbb001f106o17f0 Sorghum methylation... 34 3.3
gb|BZ330034.1|BZ330034 hv89e08.g1 WGS-SbicolorF (JM107 adap... 33 6.3
gb|CL190502.1|CL190502 104_408_10906121_114_32485_069 Sorgh... 33 6.3
gb|CW071775.1|CW071775 104_324_10591753_116_30464 Sorghum m... 33 6.3
gb|CW275217.1|CW275217 104_748_11404844_116_35381_074 Sorgh... 33 6.3
gb|CW297774.1|CW297774 104_780_11462220_116_35647_046 Sorgh... 33 6.3
gb|CW297775.1|CW297775 104_780_11462220_148_35651_046 Sorgh... 33 6.3
gb|CW423017.1|CW423017 fsbb001f132j24f0 Sorghum methylation... 33 6.3
gb|CN126550.1|CN126550 RHOH1_17_G08.g1_A002 Acid- and alkal... 26 6.8
gb|CD462983.1|CD462983 ETH1_41_F05.g1_A002 Ethylene-treated... 26 6.9
gb|CL153964.1|CL153964 104_338_10781069_114_31369_317 Sorgh... 32 8.7
gb|CW097746.1|CW097746 104_464_11002633_148_34366_015 Sorgh... 32 8.7
gb|CW321292.1|CW321292 104_814_11475470_116_35933_053 Sorgh... 32 8.7
gb|CW372826.1|CW372826 fsbb001f048o13k0 Sorghum methylation... 32 8.7
gb|CL703892.2|CL703892 SP__Bb0007I12.r SP__Bb Sorghum propi... 32 8.7
gb|CL704627.2|CL704627 SP__Bb0024B11.r SP__Bb Sorghum propi... 32 8.7
gb|CN134542.1|CN134542 OX1_27_B04.b1_A002 Oxidatively-stres... 32 8.7
>gb|DN551859.1|DN551859 pSPR-RT-MR-H1_C07_C263 pSPR Sorghum propinquum cDNA, mRNA sequence
Length = 1523
Score = 563 bits (1224), Expect = e-160
Identities = 232/238 (97%), Positives = 236/238 (99%)
Frame = +2 / -1
Query: 2 YLLNLLMKINAKLGGLNSLLQVEASSSIPHVSQVPTIILGMDVSHGHPGQDRPSVAAVVS 181
YLLNLLMKINAKLGGLNSLLQVEAS SIPHVS+VPTIILGMDVSHGHPGQDRPSVAAVVS
Sbjct: 1220 YLLNLLMKINAKLGGLNSLLQVEASPSIPHVSEVPTIILGMDVSHGHPGQDRPSVAAVVS 1041
Query: 182 SRQWPLISRYRASVHTQSARLEMMSSLFKPRGTDDDGLIRESLIDFYTSSGKRKPEHIII 361
SRQWPLIS+YRASVHTQSARLEMMSSLFKPRGTDDDGLIRESLIDFYTSSGKRKP+HIII
Sbjct: 1040 SRQWPLISKYRASVHTQSARLEMMSSLFKPRGTDDDGLIRESLIDFYTSSGKRKPDHIII 861
Query: 362 FRDGVSESQFTQVINIELDQIIEACKFLDEKWSPKFTVIVAQKNHHTKFFQTASPDNVLP 541
FRDGVSESQFTQVINIELDQIIEACKFLDEKWSPKFTVIVAQKNHHTKFFQT SPDNVLP
Sbjct: 860 FRDGVSESQFTQVINIELDQIIEACKFLDEKWSPKFTVIVAQKNHHTKFFQTGSPDNVLP 681
Query: 542 GTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFSADEMQEFVHSLSYVY 715
GTVVD+KVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFSADEMQEFVHSLSYVY
Sbjct: 680 GTVVDNKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFSADEMQEFVHSLSYVY 507
Score = 477 bits (1036), Expect = e-134
Identities = 211/238 (88%), Positives = 215/238 (90%)
Frame = -2 / +1
Query: 714 YT*DSE*TNSCISSAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPGR 535
YT*+SE*TNSCISSAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPGR
Sbjct: 508 YT*ESE*TNSCISSAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPGR 687
Query: 534 TLSGDAV*KNLVWWFF*ATITVNLGDHFSSRNLHASMI*SSSMLMTWVN*LSLTPSLKII 355
TLSGD V*KNLVWWFF*ATITVNLGDHFSSRNLHAS+I*SSSMLMTWVN*LSLTPSLK+I
Sbjct: 688 TLSGDPV*KNLVWWFF*ATITVNLGDHFSSRNLHASII*SSSMLMTWVN*LSLTPSLKMI 867
Query: 354 MCSGFRFPELV*KXXXXXXXXXXXXXXRGLNNEDIISSLADWVCTDALYLEIRGH*RELT 175
M SGFR PELV*K RGLN EDIISSLADWVCTDALYLEIRGH*RELT
Sbjct: 868 MWSGFRLPELV*KSISDSLMRPSSSVPRGLNKEDIISSLADWVCTDALYLEIRGH*RELT 1047
Query: 174 TAATEGLSCPG*PCETSIPKMMVGTCDTCGIDEDASTCSNEFRPPSFALIFISKLSRY 1
TAATEGLSCPG P +TSIPKMMVGT DT GID DASTCSNEFRPPSFALIFISKLSRY
Sbjct: 1048 TAATEGLSCPGWP*DTSIPKMMVGTSDTWGIDGDASTCSNEFRPPSFALIFISKLSRY 1221
Score = 462 bits (1002), Expect = e-129
Identities = 195/238 (81%), Positives = 211/238 (88%)
Frame = -1 / +3
Query: 715 VHVR*RMNKLLHLVCRETYLVVQNMIVGGPCCSNHPSMCTHVEVEVLRMANFTIHHSSRK 536
+H+R RMNKLLH V RETYL+VQNMI+G PCCSNHPSMCTHVEV+VLRMANF +H SS K
Sbjct: 507 IHIRERMNKLLHFVSRETYLIVQNMIMGRPCCSNHPSMCTHVEVKVLRMANFIVHDSSGK 686
Query: 535 NIVW*CRLKELGVVVLLSNNHSELG*PLLIQKLTCLDDLIQLNVDDLGKLTFTDSIPENN 356
NIVW* LK+LGVVVLLSNNHSELG*PLLI+KLTCL+ LIQ NVDDLGKLTF DSIPEN+
Sbjct: 687 NIVW*SGLKKLGVVVLLSNNHSELG*PLLIKKLTCLNYLIQFNVDDLGKLTFADSIPEND 866
Query: 355 YVFWFSLSRASVEVDQ*FPDEAIIISTPRLKQRGHHF*SGRLGVH*CSISRDKRPLTRTN 176
V WFSL+RASVEV+Q*FP+EAIIISTP LKQ GHHF*SG LGVH*CSI RDKRPLTRTN
Sbjct: 867 NVVWFSLARASVEVNQ*FPNEAIIISTPWLKQGGHHF*SGGLGVH*CSIFRDKRPLTRTN 1046
Query: 175 HRCNRRSILSWMTM*NIHT*DDGGYLRHMWY*RRCFNLQQRVQTTKLCIDLHQQIKQV 2
H CN R ILSWM M +IHT DDGGY RHM Y* RCFNLQQR+QTTKLCI+LHQQIKQV
Sbjct: 1047 HGCN*RPILSWMAMRHIHTQDDGGYFRHMGY*WRCFNLQQRIQTTKLCINLHQQIKQV 1220
Score = 449 bits (975), Expect = e-125
Identities = 198/237 (83%), Positives = 208/237 (87%)
Frame = -3 / +2
Query: 713 TRKIANEQTPASRLQRNLSRRAEHDSGWALLFQSSQHVHTCRSRSS*DGKLYYPPQFQEE 534
T K ANEQTPA R QRNLS RAEHD+G ALLFQSSQHVHTCRS+SS*DGKLY P QF+EE
Sbjct: 509 THKRANEQTPAFRQQRNLSHRAEHDNGSALLFQSSQHVHTCRSQSS*DGKLYCPRQFREE 688
Query: 533 HCLVMPSERTWCGGSFEQQSQ*TWVTTSHPETYMPR*SDPAQC**PG*TDFH*LHP*K*L 354
HCLV+ SE+TWCGGSFEQQSQ*TWVTTSH ETYMP+ SDP QC**PG*TDF *LHP*K*
Sbjct: 689 HCLVIRSEKTWCGGSFEQQSQ*TWVTTSHQETYMPQLSDPVQC**PG*TDFR*LHP*K** 868
Query: 353 CVLVFAFQS*CRSRSVIPG*GHHHQYPAA*TTRTSFLVWQIGCALMLYI*R*EAIDEN*P 174
C LVFA QS*CRS+SVIP *GHHHQYP A*T RTSFLVW+IGCALMLYI*R*EAIDEN*P
Sbjct: 869 CGLVFACQS*CRSQSVIP**GHHHQYPVA*TRRTSFLVWRIGCALMLYI*R*EAIDEN*P 1048
Query: 173 PLQPKVYLVLDDHVKHPYLR*WWVLATHVVLTKMLQLAATSSDHQALH*SSSAN*AG 3
LQ K YLVLD H HPY R*WWVL TH VL +MLQLAAT+SDHQALH*SSSAN*AG
Sbjct: 1049 RLQLKAYLVLDGHETHPYPR*WWVLPTHGVLMEMLQLAATNSDHQALH*SSSAN*AG 1219
Score = 407 bits (882), Expect = e-112
Identities = 182/237 (76%), Positives = 187/237 (78%)
Frame = +3 / -2
Query: 3 TCLIC**RSMQSLVV*TRCCKLKHLRQYHMCRKYPPSS*VWMFHMVIQDKIDLRLQRWLV 182
TCLIC**R MQSLVV* RCCKLKHL QY MCRKYPPSS VWM M IQDKI L+LQ WLV
Sbjct: 1219 TCLIC**RLMQSLVV*IRCCKLKHLHQYPMCRKYPPSSWVWMCLMAIQDKIGLQLQPWLV 1040
Query: 183 LVNGLLSLDIEHQCTPNLPD*K*CPRCLSRGVLMMMASSGNH*STSTLALESENQNT*LF 362
LVNGLLSL+IEHQCTPN PD*K*CP CLS GVLMMMAS GNH* TSTLAL SENQ T F
Sbjct: 1039 LVNGLLSLNIEHQCTPNPPD*K*CPPCLSHGVLMMMASLGNH*LTSTLALASENQTTLSF 860
Query: 363 SGMESVKVSLPRSSTLSWIRSSRHVSFWMRSGHPXXXXXXXXXXXXXXXFRRHHQTMFFL 542
SGMES KVSLPRSSTL+WIR RHVSF MRSGHP FR HQTMFF
Sbjct: 859 SGMESAKVSLPRSSTLNWIR*LRHVSFLMRSGHPSSL*LLLKRTTTPSFFRPDHQTMFFP 680
Query: 543 ELWWIVKFAILRTSTSTCVHMLG*LEQQGPPTIMFCTTR*VSLQTRCRSLFIRYLTC 713
EL W +KFAILRT TSTCVHMLG*LEQQG P IMFCT R*VSL T+CRSLFIR L C
Sbjct: 679 ELSWTIKFAILRTLTSTCVHMLG*LEQQGRPIIMFCTMR*VSLLTKCRSLFIRSLMC 509
Score = 341 bits (740), Expect(2) = e-115
Identities = 149/175 (85%), Positives = 155/175 (88%)
Frame = +1 / -3
Query: 190 MASYL*I*SISAHPICQTRNDVLVV*AAGY***WPHPGITDRLLH*LWKAKTRTHNYFQG 369
MASYL*I*SISAHPI QTRNDVL+V*A GY***WPH GITD LLH*LW+AKTR H +FQG
Sbjct: 1032 MASYL*I*SISAHPIRQTRNDVLLV*ATGY***WPH*GITD*LLH*LWQAKTRPHYHFQG 853
Query: 370 WSQ*KSVYPGHQH*AGSDHRGM*VSG*EVVTQVHCDCCSKEPPHQVLSDGITRQCSSWNC 549
WSQ KSVYPGHQH* GSD+ GM*VS *EVVTQVHCDCCSKEPPHQV SD ITRQCSS NC
Sbjct: 852 WSQRKSVYPGHQH*TGSDN*GM*VS**EVVTQVHCDCCSKEPPHQVFSDRITRQCSSRNC 673
Query: 550 GG**SLPS*ELRLLHVCTCWDDWNNKAHPLSCSARRDRFLCRRDAGVCSFAILRV 714
G *SLPS*EL LLHVCTCWDDWNNKA PLSCSAR DRFLC R+AGVCSFA+L V
Sbjct: 672 RGQ*SLPS*EL*LLHVCTCWDDWNNKADPLSCSAR*DRFLC*RNAGVCSFALLCV 508
Score = 96.8 bits (205), Expect(2) = e-115
Identities = 37/46 (80%), Positives = 39/46 (84%)
Frame = +1 / -3
Query: 1 VPA*FADEDQCKAWWSELVAAS*SIFVNTTCVASTHHHLRYGCFTW 138
VPA*FADED CKAWWSE VAAS*SI +NT CV STHHHL YGC +W
Sbjct: 1221 VPA*FADED*CKAWWSEFVAAS*SISINTPCVGSTHHHLGYGCVSW 1084
>gb|CD228245.1|CD228245 CCC1_6_E11.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_6_E11_A007 5', mRNA sequence
Length = 599
Score = 394 bits (855), Expect = e-109
Identities = 166/170 (97%), Positives = 169/170 (99%)
Frame = +2 / +2
Query: 2 YLLNLLMKINAKLGGLNSLLQVEASSSIPHVSQVPTIILGMDVSHGHPGQDRPSVAAVVS 181
YLLNLLMKINAKLGGLNSLLQVEAS SIPHVS+VPTIILGMDVSHGHPGQDRPSVAAVVS
Sbjct: 89 YLLNLLMKINAKLGGLNSLLQVEASPSIPHVSEVPTIILGMDVSHGHPGQDRPSVAAVVS 268
Query: 182 SRQWPLISRYRASVHTQSARLEMMSSLFKPRGTDDDGLIRESLIDFYTSSGKRKPEHIII 361
SRQWPLIS+YRASVHTQSARLEMMSSLFKPRGTDDDGLIRESLIDFYTSSGKRKP+HIII
Sbjct: 269 SRQWPLISKYRASVHTQSARLEMMSSLFKPRGTDDDGLIRESLIDFYTSSGKRKPDHIII 448
Query: 362 FRDGVSESQFTQVINIELDQIIEACKFLDEKWSPKFTVIVAQKNHHTKFF 511
FRDGVSESQFTQVINIELDQIIEACKFLDEKWSPKFTVIVAQKNHHTKFF
Sbjct: 449 FRDGVSESQFTQVINIELDQIIEACKFLDEKWSPKFTVIVAQKNHHTKFF 598
Score = 329 bits (713), Expect = 3e-089
Identities = 142/170 (83%), Positives = 152/170 (89%)
Frame = -1 / -2
Query: 511 KELGVVVLLSNNHSELG*PLLIQKLTCLDDLIQLNVDDLGKLTFTDSIPENNYVFWFSLS 332
K+LGVVVLLSNNHSELG*PLLI+KLTCL+ LIQ NVDDLGKLTF DSIPEN+ V WFSL+
Sbjct: 598 KKLGVVVLLSNNHSELG*PLLIKKLTCLNYLIQFNVDDLGKLTFADSIPENDNVVWFSLA 419
Query: 331 RASVEVDQ*FPDEAIIISTPRLKQRGHHF*SGRLGVH*CSISRDKRPLTRTNHRCNRRSI 152
RASVEV+Q*FP+EAIIISTP LKQ GHHF*SG LGVH*CSI RDKRPLTRTNH CN R I
Sbjct: 418 RASVEVNQ*FPNEAIIISTPWLKQGGHHF*SGGLGVH*CSIFRDKRPLTRTNHGCN*RPI 239
Query: 151 LSWMTM*NIHT*DDGGYLRHMWY*RRCFNLQQRVQTTKLCIDLHQQIKQV 2
LSWM M +IHT DDGGY RHM Y* RCFNLQQR+QTTKLCI+LHQQIKQV
Sbjct: 238 LSWMAMRHIHTQDDGGYFRHMGY*WRCFNLQQRIQTTKLCINLHQQIKQV 89
Score = 328 bits (711), Expect = 5e-089
Identities = 145/170 (85%), Positives = 148/170 (87%)
Frame = -2 / -3
Query: 510 KNLVWWFF*ATITVNLGDHFSSRNLHASMI*SSSMLMTWVN*LSLTPSLKIIMCSGFRFP 331
KNLVWWFF*ATITVNLGDHFSSRNLHAS+I*SSSMLMTWVN*LSLTPSLK+IM SGFR P
Sbjct: 597 KNLVWWFF*ATITVNLGDHFSSRNLHASII*SSSMLMTWVN*LSLTPSLKMIMWSGFRLP 418
Query: 330 ELV*KXXXXXXXXXXXXXXRGLNNEDIISSLADWVCTDALYLEIRGH*RELTTAATEGLS 151
ELV*K RGLN EDIISSLADWVCTDALYLEIRGH*RELTTAATEGLS
Sbjct: 417 ELV*KSISDSLMRPSSSVPRGLNKEDIISSLADWVCTDALYLEIRGH*RELTTAATEGLS 238
Query: 150 CPG*PCETSIPKMMVGTCDTCGIDEDASTCSNEFRPPSFALIFISKLSRY 1
CPG P +TSIPKMMVGT DT GID DASTCSNEFRPPSFALIFISKLSRY
Sbjct: 237 CPGWP*DTSIPKMMVGTSDTWGIDGDASTCSNEFRPPSFALIFISKLSRY 88
Score = 324 bits (701), Expect = 1e-087
Identities = 143/170 (84%), Positives = 150/170 (88%)
Frame = -3 / -1
Query: 512 ERTWCGGSFEQQSQ*TWVTTSHPETYMPR*SDPAQC**PG*TDFH*LHP*K*LCVLVFAF 333
++TWCGGSFEQQSQ*TWVTTSH ETYMP+ SDP QC**PG*TDF *LHP*K* C LVFA
Sbjct: 599 KKTWCGGSFEQQSQ*TWVTTSHQETYMPQLSDPVQC**PG*TDFR*LHP*K**CGLVFAC 420
Query: 332 QS*CRSRSVIPG*GHHHQYPAA*TTRTSFLVWQIGCALMLYI*R*EAIDEN*PPLQPKVY 153
QS*CRS+SVIP *GHHHQYP A*T RTSFLVW+IGCALMLYI*R*EAIDEN*P LQ K Y
Sbjct: 419 QS*CRSQSVIP**GHHHQYPVA*TRRTSFLVWRIGCALMLYI*R*EAIDEN*PRLQLKAY 240
Query: 152 LVLDDHVKHPYLR*WWVLATHVVLTKMLQLAATSSDHQALH*SSSAN*AG 3
LVLD H HPY R*WWVL TH VL +MLQLAAT+SDHQALH*SSSAN*AG
Sbjct: 239 LVLDGHETHPYPR*WWVLPTHGVLMEMLQLAATNSDHQALH*SSSAN*AG 90
Score = 290 bits (627), Expect = 2e-077
Identities = 128/154 (83%), Positives = 131/154 (85%)
Frame = +3 / +3
Query: 3 TCLIC**RSMQSLVV*TRCCKLKHLRQYHMCRKYPPSS*VWMFHMVIQDKIDLRLQRWLV 182
TCLIC**R MQSLVV* RCCKLKHL QY MCRKYPPSS VWM M IQDKI L+LQ WLV
Sbjct: 90 TCLIC**RLMQSLVV*IRCCKLKHLHQYPMCRKYPPSSWVWMCLMAIQDKIGLQLQPWLV 269
Query: 183 LVNGLLSLDIEHQCTPNLPD*K*CPRCLSRGVLMMMASSGNH*STSTLALESENQNT*LF 362
LVNGLLSL+IEHQCTPN PD*K*CP CLS GVLMMMAS GNH* TSTLAL SENQ T F
Sbjct: 270 LVNGLLSLNIEHQCTPNPPD*K*CPPCLSHGVLMMMASLGNH*LTSTLALASENQTTLSF 449
Query: 363 SGMESVKVSLPRSSTLSWIRSSRHVSFWMRSGHP 464
SGMES KVSLPRSSTL+WIR RHVSF MRSGHP
Sbjct: 450 SGMESAKVSLPRSSTLNWIR*LRHVSFLMRSGHP 551
Score = 210 bits (452), Expect(2) = 4e-076
Identities = 92/106 (86%), Positives = 96/106 (90%)
Frame = +1 / +1
Query: 190 MASYL*I*SISAHPICQTRNDVLVV*AAGY***WPHPGITDRLLH*LWKAKTRTHNYFQG 369
MASYL*I*SISAHPI QTRNDVL+V*A GY***WPH GITD LLH*LW+AKTR H +FQG
Sbjct: 277 MASYL*I*SISAHPIRQTRNDVLLV*ATGY***WPH*GITD*LLH*LWQAKTRPHYHFQG 456
Query: 370 WSQ*KSVYPGHQH*AGSDHRGM*VSG*EVVTQVHCDCCSKEPPHQV 507
WSQ KSVYPGHQH* GSD+ GM*VS *EVVTQVHCDCCSKEPPHQV
Sbjct: 457 WSQRKSVYPGHQH*TGSDN*GM*VS**EVVTQVHCDCCSKEPPHQV 594
Score = 96.8 bits (205), Expect(2) = 4e-076
Identities = 37/46 (80%), Positives = 39/46 (84%)
Frame = +1 / +1
Query: 1 VPA*FADEDQCKAWWSELVAAS*SIFVNTTCVASTHHHLRYGCFTW 138
VPA*FADED CKAWWSE VAAS*SI +NT CV STHHHL YGC +W
Sbjct: 88 VPA*FADED*CKAWWSEFVAAS*SISINTPCVGSTHHHLGYGCVSW 225
>gb|CN134509.1|CN134509 OX1_26_F12.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_26_F12_A002 5', mRNA sequence
Length = 723
Score = 376 bits (816), Expect = e-103
Identities = 147/188 (78%), Positives = 169/188 (89%)
Frame = +2 / +3
Query: 152 DRPSVAAVVSSRQWPLISRYRASVHTQSARLEMMSSLFKPRGTDDDGLIRESLIDFYTSS 331
D PS+AAVVSSR+WPLIS+YRASV TQS ++EM+ SLFKPR T+DD LIRE LIDFYTSS
Sbjct: 63 DVPSIAAVVSSREWPLISKYRASVRTQSPKMEMIDSLFKPRETEDDSLIRECLIDFYTSS 242
Query: 332 GKRKPEHIIIFRDGVSESQFTQVINIELDQIIEACKFLDEKWSPKFTVIVAQKNHHTKFF 511
GK+KP+ +IIFRDGVSESQF QV+NIEL QIIEACKFLDEKW+PKFT+I+AQKNHHTKFF
Sbjct: 243 GKKKPDQVIIFRDGVSESQFNQVLNIELQQIIEACKFLDEKWNPKFTLIIAQKNHHTKFF 422
Query: 512 QTASPDNVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFSADEMQEF 691
+NV GTVVD+KVCHP+NFDFYMC+HAGMIGTTRPTHYH+LHDEIGF+ D++QE
Sbjct: 423 IPGKTENVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFNPDDLQEL 602
Query: 692 VHSLSYVY 715
VHSLSYVY
Sbjct: 603 VHSLSYVY 626
Score = 247 bits (533), Expect(2) = 1e-069
Identities = 124/188 (65%), Positives = 133/188 (70%)
Frame = -2 / -3
Query: 714 YT*DSE*TNSCISSAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPGR 535
YT*+SE T+SC SS KPISSC ** VGLVVPIIPAC HM*KSKFLG QTLLSTTVP
Sbjct: 625 YT*ESECTSSCRSSGLKPISSCSI***VGLVVPIIPACEHM*KSKFLG*QTLLSTTVPAG 446
Query: 534 TLSGDAV*KNLVWWFF*ATITVNLGDHFSSRNLHASMI*SSSMLMTWVN*LSLTPSLKII 355
T S KNLVW FF A I VN G HFSS+NL ASMI +SM T +N*LSLTPSLK++
Sbjct: 445 TFSVFPGIKNLVW*FFWAIINVNFGFHFSSKNLQASMICCNSMFST*LN*LSLTPSLKMM 266
Query: 354 MCSGFRFPELV*KXXXXXXXXXXXXXXRGLNNEDIISSLADWVCTDALYLEIRGH*RELT 175
SGF FPELV*K RGLN E IIS L DWV T+ALY EIRGH RELT
Sbjct: 265 TWSGFFFPELV*KSIRHSRIRLSSSVSRGLNKESIISILGDWVRTEALYFEIRGHSRELT 86
Query: 174 TAATEGLS 151
TAA +G S
Sbjct: 85 TAAMDGTS 62
Score = 197 bits (424), Expect = 2e-049
Identities = 98/188 (52%), Positives = 121/188 (64%)
Frame = -1 / -2
Query: 715 VHVR*RMNKLLHLVCRETYLVVQNMIVGGPCCSNHPSMCTHVEVEVLRMANFTIHHSSRK 536
VHVR RM++LL ++ E YL++Q MI+ P +H SM THVEV+V M NF +H+SS
Sbjct: 626 VHVRERMHQLLQIIRIEAYLIMQYMIMSWPRSPDHSSM*THVEVKVPWMTNFVVHNSSSW 447
Query: 535 NIVW*CRLKELGVVVLLSNNHSELG*PLLIQKLTCLDDLIQLNVDDLGKLTFTDSIPENN 356
NI R K+ VV+LL NN EL P IQKL LDDL+QLNV L KLTFT++IPE++
Sbjct: 446 NIFCLSRNKKFSVVILLGNNQRELWIPFFIQKLASLDDLLQLNVQHLIKLTFTNTIPEDD 267
Query: 355 YVFWFSLSRASVEVDQ*FPDEAIIISTPRLKQRGHHF*SGRLGVH*CSISRDKRPLTRTN 176
+ L R VEV+Q PD+ II S P LKQR +HF LG SI RDKRP TRTN
Sbjct: 266 DLVRLLLPRTGVEVNQTLPDQTIIFSFPWLKQRVNHFHLR*LGADRSSIFRDKRPFTRTN 87
Query: 175 HRCNRRSI 152
+ N R I
Sbjct: 86 NSSNGRYI 63
Score = 159 bits (342), Expect(2) = 9e-045
Identities = 84/175 (48%), Positives = 108/175 (61%)
Frame = +1 / +2
Query: 190 MASYL*I*SISAHPICQTRNDVLVV*AAGY***WPHPGITDRLLH*LWKAKTRTHNYFQG 369
MASYL I*S HPI ND L V*A G * * PG++D LLH W+ + ++ QG
Sbjct: 101 MASYLEI*SFCPHPIT*DGND*LFV*ATGN*R**SDPGVSD*LLHQFWEEEA*PSHHLQG 280
Query: 370 WSQ*KSVYPGHQH*AGSDHRGM*VSG*EVVTQVHCDCCSKEPPHQVLSDGITRQCSSWNC 549
W *KSV G +H* ++HRG+ V G*++ ++VH D C +E PH + R+CSSWNC
Sbjct: 281 WC**KSV*SGAEH*VATNHRGLQVFG*KMESKVHVDYCPEESPH*IFYSWKDRKCSSWNC 460
Query: 550 GG**SLPS*ELRLLHVCTCWDDWNNKAHPLSCSARRDRFLCRRDAGVCSFAILRV 714
G SL S EL LLHV TCW+D + +A+ LS +A DR AG +FA+LRV
Sbjct: 461 CGQQSLSSKEL*LLHVFTCWNDRDYEANSLSYTA**DRLQS**SAGAGAFALLRV 625
Score = 149 bits (320), Expect = 4e-035
Identities = 89/187 (47%), Positives = 105/187 (56%)
Frame = -3 / -1
Query: 713 TRKIANEQTPASRLQRNLSRRAEHDSGWALLFQSSQHVHTCRSRSS*DGKLYYPPQFQEE 534
TRK AN PA +LS A +D+ A +S QHV+TCRS+SS D KL P QFQ E
Sbjct: 624 TRKRANAPAPADHQD*SLSHHAVYDNELAS*SRSFQHVNTCRSQSSLDDKLCCPQQFQLE 445
Query: 533 HCLVMPSERTWCGGSFEQQSQ*TWVTTSHPETYMPR*SDPAQC**PG*TDFH*LHP*K*L 354
H L + CG S Q S *T + HP+T PR* QC P *TDFH* HP*+*
Sbjct: 444 HFLSFQE*KI*CGDSSGQ*ST*TLDSIFHPKTCKPR*FVATQCSAPD*TDFH*HHP*R** 265
Query: 353 CVLVFAFQS*CRSRSVIPG*GHHHQYPAA*TTRTSFLVWQIGCALMLYI*R*EAIDEN*P 174
+ Q+ CRS+S PG +H Q+P A*T SF IGC LYI R*EAI EN*
Sbjct: 264 LGQASSSQNWCRSQSDTPGSDYHLQFPVA*TKSQSFPS*VIGCGQKLYISR*EAIHEN*Q 85
Query: 173 PLQPKVY 153
Q V+
Sbjct: 84 QQQWTVH 64
Score = 78.0 bits (164), Expect(2) = 1e-028
Identities = 48/94 (51%), Positives = 55/94 (58%)
Frame = +3 / +1
Query: 177 LVLVNGLLSLDIEHQCTPNLPD*K*CPRCLSRGVLMMMASSGNH*STSTLALESENQNT* 356
LVLVNGLLS +IE PN K* CLS G L M+ SG+ * TST L +
Sbjct: 88 LVLVNGLLSRNIELLSAPNHLRWK*LTLCLSHGKLKMIV*SGSV*LTSTPVLGRRSLTKS 267
Query: 357 LFSGMESVKVSLPRSSTLSWIRSSRHVSFWMRSG 458
SGM VKVSL R TLS +SSR SFWM++G
Sbjct: 268 SSSGMVLVKVSLIRC*TLSCNKSSRLASFWMKNG 369
Score = 69.8 bits (146), Expect(2) = 1e-028
Identities = 34/63 (53%), Positives = 38/63 (60%)
Frame = +3 / +1
Query: 525 QTMFFLELWWIVKFAILRTSTSTCVHMLG*LEQQGPPTIMFCTTR*VSLQTRCRSLFIRY 704
Q MF LEL W KF I T TSTCVHML * +G I++C R* S+ CRS IR
Sbjct: 436 QKMFQLELLWTTKFVIQGTLTSTCVHMLE*SGLRGQLIIIYCMMR*ASILMICRSWCIRS 615
Query: 705 LTC 713
LTC
Sbjct: 616 LTC 624
Score = 42.3 bits (86), Expect(2) = 9e-045
Identities = 19/30 (63%), Positives = 20/30 (66%)
Frame = +2 / +3
Query: 95 SQVPTIILGMDVSHGHPGQDRPSVAAVVSS 184
S+VPTIILGMDVSHG PG A V S
Sbjct: 3 SKVPTIILGMDVSHGSPGHSDVPSIAAVVS 92
Score = 37.7 bits (76), Expect(2) = 1e-069
Identities = 16/28 (57%), Positives = 18/28 (64%)
Frame = -2 / -3
Query: 177 TTAATEGLSCPG*PCETSIPKMMVGTCD 94
T A CPG P ETSIPK++VGT D
Sbjct: 85 TAAMDGTSECPGEPWETSIPKIIVGTLD 2
>gb|BF421433.1|BF421433 FM1_8_F10.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 557
Score = 258 bits (557), Expect = 9e-068
Identities = 110/113 (97%), Positives = 112/113 (99%)
Frame = +2 / +3
Query: 2 YLLNLLMKINAKLGGLNSLLQVEASSSIPHVSQVPTIILGMDVSHGHPGQDRPSVAAVVS 181
YLLNLLMKINAKLGGLNSLLQVEAS SIPHVS+VPTIILGMDVSHGHPGQDRPSVAAVVS
Sbjct: 219 YLLNLLMKINAKLGGLNSLLQVEASPSIPHVSEVPTIILGMDVSHGHPGQDRPSVAAVVS 398
Query: 182 SRQWPLISRYRASVHTQSARLEMMSSLFKPRGTDDDGLIRESLIDFYTSSGKR 340
SRQWPLIS+YRASVHTQSARLEMMSSLFKPRGTDDDGLIRESLIDFYTSSGKR
Sbjct: 399 SRQWPLISKYRASVHTQSARLEMMSSLFKPRGTDDDGLIRESLIDFYTSSGKR 557
Score = 219 bits (472), Expect = 5e-056
Identities = 94/113 (83%), Positives = 100/113 (88%)
Frame = -1 / -1
Query: 340 SLSRASVEVDQ*FPDEAIIISTPRLKQRGHHF*SGRLGVH*CSISRDKRPLTRTNHRCNR 161
SL+RASVEV+Q*FP+EAIIISTP LKQ GHHF*SG LGVH*CSI RDKRPLTRTNH CN
Sbjct: 557 SLARASVEVNQ*FPNEAIIISTPWLKQGGHHF*SGGLGVH*CSIFRDKRPLTRTNHGCN* 378
Query: 160 RSILSWMTM*NIHT*DDGGYLRHMWY*RRCFNLQQRVQTTKLCIDLHQQIKQV 2
R ILSWM M +IHT DDGGY RHM Y* RCFNLQQR+QTTKLCI+LHQQIKQV
Sbjct: 377 RPILSWMAMRHIHTQDDGGYFRHMGY*WRCFNLQQRIQTTKLCINLHQQIKQV 219
Score = 214 bits (461), Expect = 2e-054
Identities = 94/112 (83%), Positives = 96/112 (85%)
Frame = +3 / +1
Query: 3 TCLIC**RSMQSLVV*TRCCKLKHLRQYHMCRKYPPSS*VWMFHMVIQDKIDLRLQRWLV 182
TCLIC**R MQSLVV* RCCKLKHL QY MCRKYPPSS VWM M IQDKI L+LQ WLV
Sbjct: 220 TCLIC**RLMQSLVV*IRCCKLKHLHQYPMCRKYPPSSWVWMCLMAIQDKIGLQLQPWLV 399
Query: 183 LVNGLLSLDIEHQCTPNLPD*K*CPRCLSRGVLMMMASSGNH*STSTLALES 338
LVNGLLSL+IEHQCTPN PD*K*CP CLS GVLMMMAS GNH* TSTLAL S
Sbjct: 400 LVNGLLSLNIEHQCTPNPPD*K*CPPCLSHGVLMMMASLGNH*LTSTLALAS 555
Score = 210 bits (452), Expect = 3e-053
Identities = 94/112 (83%), Positives = 98/112 (87%)
Frame = -3 / -3
Query: 338 AFQS*CRSRSVIPG*GHHHQYPAA*TTRTSFLVWQIGCALMLYI*R*EAIDEN*PPLQPK 159
A QS*CRS+SVIP *GHHHQYP A*T RTSFLVW+IGCALMLYI*R*EAIDEN*P LQ K
Sbjct: 555 ACQS*CRSQSVIP**GHHHQYPVA*TRRTSFLVWRIGCALMLYI*R*EAIDEN*PRLQLK 376
Query: 158 VYLVLDDHVKHPYLR*WWVLATHVVLTKMLQLAATSSDHQALH*SSSAN*AG 3
YLVLD H HPY R*WWVL TH VL +MLQLAAT+SDHQALH*SSSAN*AG
Sbjct: 375 AYLVLDGHETHPYPR*WWVLPTHGVLMEMLQLAATNSDHQALH*SSSAN*AG 220
Score = 204 bits (440), Expect = 1e-051
Identities = 91/113 (80%), Positives = 92/113 (81%)
Frame = -2 / -2
Query: 339 RFPELV*KXXXXXXXXXXXXXXRGLNNEDIISSLADWVCTDALYLEIRGH*RELTTAATE 160
R PELV*K RGLN EDIISSLADWVCTDALYLEIRGH*RELTTAATE
Sbjct: 556 RLPELV*KSISDSLMRPSSSVPRGLNKEDIISSLADWVCTDALYLEIRGH*RELTTAATE 377
Query: 159 GLSCPG*PCETSIPKMMVGTCDTCGIDEDASTCSNEFRPPSFALIFISKLSRY 1
GLSCPG P +TSIPKMMVGT DT GID DASTCSNEFRPPSFALIFISKLSRY
Sbjct: 376 GLSCPGWP*DTSIPKMMVGTSDTWGIDGDASTCSNEFRPPSFALIFISKLSRY 218
Score = 96.8 bits (205), Expect(2) = 2e-041
Identities = 37/46 (80%), Positives = 39/46 (84%)
Frame = +1 / +2
Query: 1 VPA*FADEDQCKAWWSELVAAS*SIFVNTTCVASTHHHLRYGCFTW 138
VPA*FADED CKAWWSE VAAS*SI +NT CV STHHHL YGC +W
Sbjct: 218 VPA*FADED*CKAWWSEFVAAS*SISINTPCVGSTHHHLGYGCVSW 355
Score = 94.1 bits (199), Expect(2) = 2e-041
Identities = 44/50 (88%), Positives = 46/50 (92%)
Frame = +1 / +2
Query: 190 MASYL*I*SISAHPICQTRNDVLVV*AAGY***WPHPGITDRLLH*LWKA 339
MASYL*I*SISAHPI QTRNDVL+V*A GY***WPH GITD LLH*LW+A
Sbjct: 407 MASYL*I*SISAHPIRQTRNDVLLV*ATGY***WPH*GITD*LLH*LWQA 556
>gb|DN551908.1|DN551908 pSPR-RT-MR-H2_E02_C027 pSPR Sorghum propinquum cDNA, mRNA sequence
Length = 871
Score = 238 bits (514), Expect = 7e-062
Identities = 90/113 (79%), Positives = 102/113 (90%)
Frame = +2 / -1
Query: 377 SESQFTQVINIELDQIIEACKFLDEKWSPKFTVIVAQKNHHTKFFQTASPDNVLPGTVVD 556
SESQF QV+NIEL QIIEACKFLDEKW+PKFT+I+AQKNHHTKFF +NV GTVVD
Sbjct: 871 SESQFNQVLNIELQQIIEACKFLDEKWNPKFTLIIAQKNHHTKFFIPGKTENVPAGTVVD 692
Query: 557 SKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFSADEMQEFVHSLSYVY 715
+KVCHP+NFDFYMC+HAGMIGTTRPTHYH+LHDEIGF+ D++QE VHSLSYVY
Sbjct: 691 NKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFNPDDLQELVHSLSYVY 533
Score = 155 bits (334), Expect = 5e-037
Identities = 79/112 (70%), Positives = 84/112 (75%)
Frame = -2 / +3
Query: 714 YT*DSE*TNSCISSAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPGR 535
YT*+SE T+SC SS KPISSCR ** VGLVVPIIPAC HM*KSKFLG QTLLSTTVP
Sbjct: 534 YT*ESECTSSCRSSGLKPISSCRI***VGLVVPIIPACEHM*KSKFLG*QTLLSTTVPAG 713
Query: 534 TLSGDAV*KNLVWWFF*ATITVNLGDHFSSRNLHASMI*SSSMLMTWVN*LS 379
T S KNLVW FF A I VN G HFSS+NL ASMI +SM T +N*LS
Sbjct: 714 TFSVFPGMKNLVW*FFCAIINVNFGFHFSSKNLQASMICCNSMFST*LN*LS 869
Score = 129 bits (276), Expect = 5e-029
Identities = 61/113 (53%), Positives = 76/113 (67%)
Frame = -1 / +2
Query: 715 VHVR*RMNKLLHLVCRETYLVVQNMIVGGPCCSNHPSMCTHVEVEVLRMANFTIHHSSRK 536
VHVR RM++LL ++ E YL++QNMI+ P +H SM THVEV+V M NF +H+SS
Sbjct: 533 VHVRERMHQLLQIIRIEAYLIMQNMIMSWPRSPDHSSMRTHVEVKVPWMTNFVVHNSSSW 712
Query: 535 NIVW*CRLKELGVVVLLSNNHSELG*PLLIQKLTCLDDLIQLNVDDLGKLTFT 377
NI R ++ VV+LL NN EL P IQKL LDDL+QLNV L KLTFT
Sbjct: 713 NIFCLSRNEKFSVVILLRNNQRELRIPFFIQKLASLDDLLQLNVQHLIKLTFT 871
Score = 109 bits (233), Expect = 4e-023
Identities = 54/112 (48%), Positives = 72/112 (64%)
Frame = +1 / -3
Query: 379 *KSVYPGHQH*AGSDHRGM*VSG*EVVTQVHCDCCSKEPPHQVLSDGITRQCSSWNCGG* 558
*KSV G +H* ++HRG+ V G*++ ++VH D C++E PH + R+CSSWNC G
Sbjct: 869 *KSV*SGAEH*VATNHRGLQVFG*KMESEVHVDYCAEESPH*IFHSWKDRKCSSWNCCGQ 690
Query: 559 *SLPS*ELRLLHVCTCWDDWNNKAHPLSCSARRDRFLCRRDAGVCSFAILRV 714
SL S EL LLHV CW+D + +A+ LS SA DR AG +FA+LRV
Sbjct: 689 QSLSSKEL*LLHVFACWNDRDYEANSLSYSA**DRLQS**SAGAGAFALLRV 534
Score = 95.9 bits (203), Expect = 6e-019
Identities = 53/112 (47%), Positives = 62/112 (55%)
Frame = -3 / +1
Query: 713 TRKIANEQTPASRLQRNLSRRAEHDSGWALLFQSSQHVHTCRSRSS*DGKLYYPPQFQEE 534
TRK AN PA +LS AE+D+ A +S QH +TCRS+SS D KL P QFQ E
Sbjct: 535 TRKRANAPAPADHQD*SLSHHAEYDNELAS*SRSFQHANTCRSQSSLDDKLCCPQQFQLE 714
Query: 533 HCLVMPSERTWCGGSFEQQSQ*TWVTTSHPETYMPR*SDPAQC**PG*TDFH 378
H L + CG S Q S *T + HP+T PR* QC P *TDFH
Sbjct: 715 HFLSFQE*KI*CGDSSAQ*ST*TSDSIFHPKTCKPR*FVATQCSAPD*TDFH 870
Score = 67.5 bits (141), Expect(2) = 1e-015
Identities = 34/63 (53%), Positives = 37/63 (58%)
Frame = +3 / -2
Query: 525 QTMFFLELWWIVKFAILRTSTSTCVHMLG*LEQQGPPTIMFCTTR*VSLQTRCRSLFIRY 704
Q MF LEL W KF I T TSTCV ML * +G I+FC R* S+ CRS IR
Sbjct: 723 QKMFQLELLWTTKFVIQGTLTSTCVRMLE*SGLRGQLIIIFCMMR*ASILMICRSWCIRS 544
Query: 705 LTC 713
LTC
Sbjct: 543 LTC 535
Score = 36.3 bits (73), Expect(2) = 1e-015
Identities = 17/27 (62%), Positives = 20/27 (74%)
Frame = +3 / -2
Query: 378 VKVSLPRSSTLSWIRSSRHVSFWMRSG 458
VKVSL R TLS +SSR SFWM++G
Sbjct: 870 VKVSLIRC*TLSCNKSSRLASFWMKNG 790
>gb|CW272375.1|CW272375 104_744_11403400_148_36227_054 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11403400, DNA
sequence
Length = 709
Score = 84.5 bits (178), Expect(5) = 9e-055
Identities = 31/35 (88%), Positives = 34/35 (97%)
Frame = +2 / -2
Query: 422 IIEACKFLDEKWSPKFTVIVAQKNHHTKFFQTASP 526
+++ACKFLDEKWSPKFTVIVAQKNHHTKFFQT SP
Sbjct: 105 LMQACKFLDEKWSPKFTVIVAQKNHHTKFFQTGSP 1
Score = 77.6 bits (163), Expect(5) = 8e-047
Identities = 31/32 (96%), Positives = 31/32 (96%)
Frame = -2 / +2
Query: 525 GDAV*KNLVWWFF*ATITVNLGDHFSSRNLHA 430
GD V*KNLVWWFF*ATITVNLGDHFSSRNLHA
Sbjct: 2 GDPV*KNLVWWFF*ATITVNLGDHFSSRNLHA 97
Score = 74.4 bits (156), Expect(5) = 3e-039
Identities = 28/32 (87%), Positives = 30/32 (93%)
Frame = -3 / +3
Query: 524 VMPSERTWCGGSFEQQSQ*TWVTTSHPETYMP 429
V+ SE+TWCGGSFEQQSQ*TWVTTSH ETYMP
Sbjct: 3 VIRSEKTWCGGSFEQQSQ*TWVTTSHQETYMP 98
Score = 70.3 bits (147), Expect(5) = 1e-041
Identities = 29/32 (90%), Positives = 29/32 (90%)
Frame = +1 / -1
Query: 430 GM*VSG*EVVTQVHCDCCSKEPPHQVLSDGIT 525
GM*VS *EVVTQVHCDCCSKEPPHQV SD IT
Sbjct: 97 GM*VS**EVVTQVHCDCCSKEPPHQVFSDRIT 2
Score = 67.0 bits (140), Expect(4) = 3e-033
Identities = 29/33 (87%), Positives = 31/33 (93%)
Frame = -1 / +1
Query: 526 W*CRLKELGVVVLLSNNHSELG*PLLIQKLTCL 428
W* LK+LGVVVLLSNNHSELG*PLLI+KLTCL
Sbjct: 1 W*SGLKKLGVVVLLSNNHSELG*PLLIKKLTCL 99
Score = 64.3 bits (134), Expect(5) = 8e-047
Identities = 26/27 (96%), Positives = 26/27 (96%)
Frame = -2 / +3
Query: 267 LNNEDIISSLADWVCTDALYLEIRGH* 187
LN EDIISSLADWVCTDALYLEIRGH*
Sbjct: 627 LNKEDIISSLADWVCTDALYLEIRGH* 707
Score = 61.6 bits (128), Expect(5) = 9e-055
Identities = 25/26 (96%), Positives = 26/26 (100%)
Frame = +2 / -1
Query: 185 RQWPLISRYRASVHTQSARLEMMSSL 262
RQWPLIS+YRASVHTQSARLEMMSSL
Sbjct: 709 RQWPLISKYRASVHTQSARLEMMSSL 632
Score = 59.7 bits (124), Expect(5) = 1e-041
Identities = 24/30 (80%), Positives = 26/30 (86%)
Frame = +3 / -2
Query: 186 VNGLLSLDIEHQCTPNLPD*K*CPRCLSRG 275
VNGLLSL+IEHQCTPN PD*K*CP C + G
Sbjct: 708 VNGLLSLNIEHQCTPNPPD*K*CPPC*ATG 619
Score = 57.4 bits (119), Expect(5) = 3e-039
Identities = 25/30 (83%), Positives = 26/30 (86%)
Frame = -3 / +1
Query: 275 PAA*TTRTSFLVWQIGCALMLYI*R*EAID 186
P T RTSFLVW+IGCALMLYI*R*EAID
Sbjct: 619 PRGLTRRTSFLVWRIGCALMLYI*R*EAID 708
Score = 55.6 bits (115), Expect(4) = 3e-033
Identities = 23/26 (88%), Positives = 23/26 (88%)
Frame = -1 / +2
Query: 262 QRGHHF*SGRLGVH*CSISRDKRPLT 185
Q GHHF*SG LGVH*CSI RDKRPLT
Sbjct: 632 QGGHHF*SGGLGVH*CSIFRDKRPLT 709
Score = 55.6 bits (115), Expect(5) = 9e-055
Identities = 22/23 (95%), Positives = 23/23 (100%)
Frame = +2 / -2
Query: 299 RESLIDFYTSSGKRKPEHIIIFR 367
RESLIDFYTSSGKRKP+HIIIFR
Sbjct: 498 RESLIDFYTSSGKRKPDHIIIFR 430
Score = 54.2 bits (112), Expect(5) = 9e-055
Identities = 23/23 (100%), Positives = 23/23 (100%)
Frame = +2 / -1
Query: 362 FRDGVSESQFTQVINIELDQIIE 430
FRDGVSESQFTQVINIELDQIIE
Sbjct: 274 FRDGVSESQFTQVINIELDQIIE 206
Score = 49.6 bits (102), Expect(4) = 2e-018
Identities = 23/25 (92%), Positives = 24/25 (96%)
Frame = +1 / -3
Query: 190 MASYL*I*SISAHPICQTRNDVLVV 264
MASYL*I*SISAHPI QTRNDVL+V
Sbjct: 704 MASYL*I*SISAHPIRQTRNDVLLV 630
Score = 48.7 bits (100), Expect(5) = 1e-041
Identities = 19/25 (76%), Positives = 21/25 (84%)
Frame = +1 / -3
Query: 358 YFQGWSQ*KSVYPGHQH*AGSDHRG 432
+F GWSQ KSVYPGHQH* GSD+ G
Sbjct: 278 WF*GWSQRKSVYPGHQH*TGSDN*G 204
Score = 48.7 bits (100), Expect(5) = 8e-047
Identities = 22/23 (95%), Positives = 23/23 (100%)
Frame = -2 / +3
Query: 429 SMI*SSSMLMTWVN*LSLTPSLK 361
S+I*SSSMLMTWVN*LSLTPSLK
Sbjct: 207 SII*SSSMLMTWVN*LSLTPSLK 275
Score = 46.0 bits (94), Expect(5) = 8e-047
Identities = 18/24 (75%), Positives = 22/24 (91%)
Frame = -1 / +1
Query: 367 PENNYVFWFSLSRASVEVDQ*FPD 296
PEN+ V WFSL+RASVEV+Q*FP+
Sbjct: 430 PENDNVVWFSLARASVEVNQ*FPE 501
Score = 44.6 bits (91), Expect(5) = 3e-039
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -3 / +1
Query: 434 MPR*SDPAQC**PG*TDFH*LHP* 363
+P+ SDP QC**PG*TDF *LHP*
Sbjct: 202 LPQLSDPVQC**PG*TDFR*LHP* 273
Score = 44.1 bits (90), Expect(4) = 2e-018
Identities = 20/29 (68%), Positives = 21/29 (72%)
Frame = +3 / -2
Query: 336 SENQNT*LFSGMESVKVSLPRSSTLSWIR 422
S N L GMES KVSLPRSSTL+WIR
Sbjct: 300 SVKSNHLLVLGMESAKVSLPRSSTLNWIR 214
Score = 44.1 bits (90), Expect(4) = 3e-033
Identities = 18/25 (72%), Positives = 21/25 (84%)
Frame = -1 / +2
Query: 430 LDDLIQLNVDDLGKLTFTDSIPENN 356
L+ LIQ NVDDLGKLTF DSIP+ +
Sbjct: 206 LNYLIQFNVDDLGKLTFADSIPKTS 280
Score = 42.8 bits (87), Expect(5) = 1e-041
Identities = 17/22 (77%), Positives = 19/22 (86%)
Frame = +1 / -1
Query: 301 GITDRLLH*LWKAKTRTHNYFQ 366
GITD LLH*LW+AKTR H +FQ
Sbjct: 496 GITD*LLH*LWQAKTRPHYHFQ 431
Score = 42.3 bits (86), Expect = 0.008
Identities = 19/26 (73%), Positives = 21/26 (80%)
Frame = +3 / -3
Query: 297 SGNH*STSTLALESENQNT*LFSGME 374
SGNH* TSTLAL SENQ T FSG++
Sbjct: 500 SGNH*LTSTLALASENQTTLSFSGLK 423
Score = 37.7 bits (76), Expect(5) = 3e-039
Identities = 19/25 (76%), Positives = 20/25 (80%)
Frame = -3 / +3
Query: 374 LHP*K*LCVLVFAFQS*CRSRSVIP 300
L *K* C LVFA QS*CRS+SVIP
Sbjct: 423 LQT*K**CGLVFACQS*CRSQSVIP 497
Score = 35.9 bits (72), Expect(5) = 9e-055
Identities = 14/21 (66%), Positives = 16/21 (76%)
Frame = +2 / -3
Query: 260 LFKPRGTDDDGLIRESLIDFY 322
L KPRGTDDDGLIR + +Y
Sbjct: 635 LVKPRGTDDDGLIR*VISSYY 573
Score = 34.5 bits (69), Expect(4) = 3e-033
Identities = 15/20 (75%), Positives = 17/20 (85%)
Frame = -2 / +2
Query: 375 TPSLKIIMCSGFRFPELV*K 316
T +LK+IM SGFR PELV*K
Sbjct: 422 TSNLKMIMWSGFRLPELV*K 481
Score = 31.8 bits (63), Expect(4) = 2e-018
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = +3 / -3
Query: 429 RHVSFWMRSGHPXXXXXXXXXXXXXXXFRRHH 524
RHVSF MRSGHP FR H
Sbjct: 98 RHVSFLMRSGHPSSL*LLLKRTTTPSFFRPDH 3
Score = 28.1 bits (55), Expect(5) = 8e-047
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = -3 / +2
Query: 296 *GHHHQYPAA* 264
*GHHHQYP A*
Sbjct: 599 *GHHHQYPVA* 631
Score = 25.4 bits (49), Expect(5) = 1e-041
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = +3 / -1
Query: 264 LSRGVLMMMASSG 302
LS GVLMMMAS G
Sbjct: 631 LSHGVLMMMASLG 593
Score = 24.4 bits (47), Expect(5) = 3e-039
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = -1 / +3
Query: 301 PDEAIIISTPRLKQ 260
P+EAIIISTP L +
Sbjct: 594 PNEAIIISTPWLNK 635
Score = 24.4 bits (47), Expect(4) = 2e-018
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = +1 / -2
Query: 265 *AAGY***WPH 297
*A GY***WPH
Sbjct: 630 *ATGY***WPH 598
>gb|BI140650.1|BI140650 IP1_52_A07.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 531
Score = 192 bits (414), Expect(2) = 2e-054
Identities = 79/99 (79%), Positives = 90/99 (90%)
Frame = +2 / +2
Query: 152 DRPSVAAVVSSRQWPLISRYRASVHTQSARLEMMSSLFKPRGTDDDGLIRESLIDFYTSS 331
D PS+AAVVSSR+WPLIS+YRASV TQS ++EM+ SLFKPR T+DDGLIRE LIDFYTSS
Sbjct: 233 DVPSIAAVVSSREWPLISKYRASVRTQSPKMEMIDSLFKPRETEDDGLIRECLIDFYTSS 412
Query: 332 GKRKPEHIIIFRDGVSESQFTQVINIELDQIIEACKFLD 448
GK+KP+ +IIFRDGVSESQF QV+NIEL QIIEACKFLD
Sbjct: 413 GKKKPDQVIIFRDGVSESQFNQVLNIELQQIIEACKFLD 529
Score = 122 bits (262), Expect(2) = 4e-043
Identities = 61/100 (61%), Positives = 68/100 (68%)
Frame = -2 / -1
Query: 450 SSRNLHASMI*SSSMLMTWVN*LSLTPSLKIIMCSGFRFPELV*KXXXXXXXXXXXXXXR 271
SS+NL ASMI +SM T +N*LSLTPSLK++ SGF FPELV*K R
Sbjct: 531 SSKNLQASMICCNSMFST*LN*LSLTPSLKMMTWSGFFFPELV*KSIRHSRIRPSSSVSR 352
Query: 270 GLNNEDIISSLADWVCTDALYLEIRGH*RELTTAATEGLS 151
GLN E IIS L DWV T+ALY EIRGH RELTTAA +G S
Sbjct: 351 GLNKESIISILGDWVRTEALYFEIRGHSRELTTAAMDGTS 232
Score = 110 bits (234), Expect(2) = 5e-027
Identities = 55/99 (55%), Positives = 65/99 (65%)
Frame = -1 / -3
Query: 448 IQKLTCLDDLIQLNVDDLGKLTFTDSIPENNYVFWFSLSRASVEVDQ*FPDEAIIISTPR 269
IQKL LDDL+QLNV L KLTFT++IPE++ + L R VEV+Q PD+ II S P
Sbjct: 529 IQKLASLDDLLQLNVQHLIKLTFTNTIPEDDDLVRLLLPRTGVEVNQTLPDQTIIFSFPW 350
Query: 268 LKQRGHHF*SGRLGVH*CSISRDKRPLTRTNHRCNRRSI 152
LKQR +HF LG SI RDKRP TRTN+ N R I
Sbjct: 349 LKQRVNHFHLR*LGADRSSIFRDKRPFTRTNNSSNGRYI 233
Score = 95.0 bits (201), Expect(2) = 4e-038
Identities = 41/61 (67%), Positives = 47/61 (77%)
Frame = +2 / +2
Query: 2 YLLNLLMKINAKLGGLNSLLQVEASSSIPHVSQVPTIILGMDVSHGHPGQDRPSVAAVVS 181
YL N+L+KINAKLGG+NSLLQ+E S +IP VS+VPTIILGMDVSHG PG A V
Sbjct: 80 YLTNVLLKINAKLGGMNSLLQIETSPAIPQVSKVPTIILGMDVSHGSPGHSDVPSIAAVV 259
Query: 182 S 184
S
Sbjct: 260 S 262
Score = 89.5 bits (189), Expect(2) = 2e-018
Identities = 51/99 (51%), Positives = 58/99 (58%)
Frame = -3 / -2
Query: 449 HPETYMPR*SDPAQC**PG*TDFH*LHP*K*LCVLVFAFQS*CRSRSVIPG*GHHHQYPA 270
HP+T PR* QC P *TDFH* HP*+* + Q+ CRS+S PG HH Q+P
Sbjct: 530 HPKTCKPR*FVATQCSAPD*TDFH*HHP*R**LGQASSSQNWCRSQSDTPGSDHHLQFPV 351
Query: 269 A*TTRTSFLVWQIGCALMLYI*R*EAIDEN*PPLQPKVY 153
A*T SF IGC LYI R*EAI EN* Q V+
Sbjct: 350 A*TKSQSFPS*VIGCGQKLYISR*EAIHEN*QQQQWTVH 234
Score = 84.5 bits (178), Expect(2) = 4e-038
Identities = 44/87 (50%), Positives = 54/87 (62%)
Frame = +1 / +1
Query: 190 MASYL*I*SISAHPICQTRNDVLVV*AAGY***WPHPGITDRLLH*LWKAKTRTHNYFQG 369
MASYL I*S HPI ND L V*A G * *W PG++D LLH W+ + ++ QG
Sbjct: 271 MASYLEI*SFCPHPIT*DGND*LFV*ATGN*R*WSDPGVSD*LLHQFWEEEA*PSHHLQG 450
Query: 370 WSQ*KSVYPGHQH*AGSDHRGM*VSG* 450
W *KSV G +H* ++HRG+ V G*
Sbjct: 451 WC**KSV*SGAEH*VATNHRGLQVFG* 531
Score = 75.8 bits (159), Expect(2) = 4e-016
Identities = 48/91 (52%), Positives = 52/91 (57%)
Frame = +3 / +3
Query: 177 LVLVNGLLSLDIEHQCTPNLPD*K*CPRCLSRGVLMMMASSGNH*STSTLALESENQNT* 356
LVLVNGLLS +IE PN K* CLS G L MM SG+ * TST L +
Sbjct: 258 LVLVNGLLSRNIELLSAPNHLRWK*LTLCLSHGKLKMMV*SGSV*LTSTPVLGRRSLTKS 437
Query: 357 LFSGMESVKVSLPRSSTLSWIRSSRHVSFWM 449
SGM VKVSL R TLS +SSR SFWM
Sbjct: 438 SSSGMVLVKVSLIRC*TLSCNKSSRLASFWM 530
Score = 73.5 bits (154), Expect(2) = 4e-043
Identities = 34/59 (57%), Positives = 36/59 (61%)
Frame = -2 / -1
Query: 177 TTAATEGLSCPG*PCETSIPKMMVGTCDTCGIDEDASTCSNEFRPPSFALIFISKLSRY 1
T A CPG P ETSIPK++VGT DT GI D S SNEF PPSFA IF RY
Sbjct: 255 TAAMDGTSECPGEPWETSIPKIIVGTLDT*GIAGDVSIWSNEFMPPSFAFIFSRTFVRY 79
Score = 41.4 bits (84), Expect(2) = 2e-054
Identities = 15/39 (38%), Positives = 25/39 (64%)
Frame = +1 / +1
Query: 22 EDQCKAWWSELVAAS*SIFVNTTCVASTHHHLRYGCFTW 138
+D+CKA W E VA +*+I N++ + +++L GC W
Sbjct: 100 KDKCKAGWHEFVAPN*NIPSNSSSIQGPNYNLGNGCLPW 216
Score = 32.2 bits (64), Expect(2) = 5e-027
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = -1 / -3
Query: 73 CFNLQQRVQTTKLCIDL 23
CFNL+QR+ T+LCI L
Sbjct: 151 CFNLEQRIHATQLCIYL 101
Score = 29.9 bits (59), Expect(2) = 4e-016
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = +3 / +3
Query: 21 *RSMQSLVV*TRCCKLKHLRQY 86
*R MQS V * RC KLKH +Q+
Sbjct: 99 *R*MQSWVA*IRCSKLKHPQQF 164
Score = 23.5 bits (45), Expect(2) = 2e-018
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = -3 / -2
Query: 83 LTKMLQLAATSSDHQALH 30
L M Q AT+S H ALH
Sbjct: 161 LLGMFQFGATNSCHPALH 108
>gb|CW041428.1|CW041428 104_274_10506544_116_30434 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10506544, DNA
sequence
Length = 715
Score = 97.3 bits (206), Expect(3) = 1e-053
Identities = 37/39 (94%), Positives = 37/39 (94%)
Frame = +2 / +2
Query: 434 CKFLDEKWSPKFTVIVAQKNHHTKFFQTASPDNVLPGTV 550
CKFLDEKWSPKFTVIVAQKNHHTKFFQT SPDNVLPG V
Sbjct: 2 CKFLDEKWSPKFTVIVAQKNHHTKFFQTGSPDNVLPGNV 118
Score = 92.7 bits (196), Expect(3) = 1e-047
Identities = 37/39 (94%), Positives = 38/39 (97%)
Frame = -2 / -2
Query: 549 TVPGRTLSGDAV*KNLVWWFF*ATITVNLGDHFSSRNLH 433
T+PGRTLSGD V*KNLVWWFF*ATITVNLGDHFSSRNLH
Sbjct: 117 TLPGRTLSGDPV*KNLVWWFF*ATITVNLGDHFSSRNLH 1
Score = 85.8 bits (181), Expect(3) = 1e-053
Identities = 34/40 (85%), Positives = 35/40 (87%)
Frame = +2 / +1
Query: 593 MCAHAGMIGTTRPTHYHVLHDEIGFSADEMQEFVHSLSYV 712
+CA GTTRPTHYHVLHDEIGFSADEMQEFVHSLSYV
Sbjct: 382 VCACCSYQGTTRPTHYHVLHDEIGFSADEMQEFVHSLSYV 501
Score = 84.9 bits (179), Expect(3) = 3e-041
Identities = 31/37 (83%), Positives = 35/37 (94%)
Frame = -3 / -3
Query: 545 FQEEHCLVMPSERTWCGGSFEQQSQ*TWVTTSHPETY 435
++EEHCLV+ SE+TWCGGSFEQQSQ*TWVTTSH ETY
Sbjct: 113 YREEHCLVIRSEKTWCGGSFEQQSQ*TWVTTSHQETY 3
Score = 80.8 bits (170), Expect(3) = 2e-037
Identities = 34/39 (87%), Positives = 34/39 (87%)
Frame = +1 / +1
Query: 433 M*VSG*EVVTQVHCDCCSKEPPHQVLSDGITRQCSSWNC 549
M*VS *EVVTQVHCDCCSKEPPHQV SD ITRQCSS C
Sbjct: 1 M*VS**EVVTQVHCDCCSKEPPHQVFSDRITRQCSSR*C 117
Score = 74.8 bits (157), Expect(3) = 1e-047
Identities = 34/40 (85%), Positives = 35/40 (87%)
Frame = -2 / -3
Query: 714 YT*DSE*TNSCISSAEKPISSCRT**WVGLVVPIIPACAH 595
YT*+SE*TNSCISSAEKPISSCRT**WVGLVVP AH
Sbjct: 503 YT*ESE*TNSCISSAEKPISSCRT**WVGLVVP*YEQQAH 384
Score = 69.8 bits (146), Expect(3) = 2e-034
Identities = 31/35 (88%), Positives = 33/35 (94%)
Frame = -1 / -1
Query: 538 KNIVW*CRLKELGVVVLLSNNHSELG*PLLIQKLT 434
KNIVW* LK+LGVVVLLSNNHSELG*PLLI+KLT
Sbjct: 106 KNIVW*SGLKKLGVVVLLSNNHSELG*PLLIKKLT 2
Score = 67.0 bits (140), Expect(3) = 3e-041
Identities = 25/33 (75%), Positives = 29/33 (87%)
Frame = -1 / -2
Query: 715 VHVR*RMNKLLHLVCRETYLVVQNMIVGGPCCS 617
+H+R RMNKLLH V RETYL+VQNMI+G PCCS
Sbjct: 504 LHIRERMNKLLHFVSRETYLIVQNMIMGRPCCS 406
Score = 67.0 bits (140), Expect(3) = 1e-053
Identities = 24/25 (96%), Positives = 25/25 (100%)
Frame = +2 / +1
Query: 542 GTVVDSKVCHPKNFDFYMCAHAGMI 616
GTVVD+KVCHPKNFDFYMCAHAGMI
Sbjct: 211 GTVVDNKVCHPKNFDFYMCAHAGMI 285
Score = 62.5 bits (130), Expect(3) = 1e-047
Identities = 25/25 (100%), Positives = 25/25 (100%)
Frame = -2 / -3
Query: 615 IIPACAHM*KSKFLGWQTLLSTTVP 541
IIPACAHM*KSKFLGWQTLLSTTVP
Sbjct: 284 IIPACAHM*KSKFLGWQTLLSTTVP 210
Score = 62.5 bits (130), Expect(3) = 2e-037
Identities = 27/40 (67%), Positives = 30/40 (75%)
Frame = +1 / +3
Query: 595 VCTCWDDWNNKAHPLSCSARRDRFLCRRDAGVCSFAILRV 714
+C NNKA PLSCSAR DRFLC R+AGVCSFA+L V
Sbjct: 384 MCLLLVSGNNKADPLSCSAR*DRFLC*RNAGVCSFALLCV 503
Score = 59.3 bits (123), Expect(3) = 1e-023
Identities = 25/32 (78%), Positives = 26/32 (81%)
Frame = +3 / +2
Query: 618 EQQGPPTIMFCTTR*VSLQTRCRSLFIRYLTC 713
EQQG P IMFCT R*VSL T+CRSLFIR L C
Sbjct: 407 EQQGRPIIMFCTMR*VSLLTKCRSLFIRSLMC 502
Score = 59.3 bits (123), Expect(3) = 2e-034
Identities = 26/39 (66%), Positives = 28/39 (71%)
Frame = -3 / -1
Query: 713 TRKIANEQTPASRLQRNLSRRAEHDSGWALLFQSSQHVH 597
T K ANEQTPA R QRNLS RAEHD+G ALLF + H
Sbjct: 502 THKRANEQTPAFRQQRNLSHRAEHDNGSALLFPDTSSKH 386
Score = 56.5 bits (117), Expect(3) = 3e-041
Identities = 22/33 (66%), Positives = 27/33 (81%)
Frame = -3 / -1
Query: 617 QSSQHVHTCRSRSS*DGKLYYPPQFQEEHCLVM 519
QSSQHVHTCRS+SS*DGKLY P QF + + ++
Sbjct: 286 QSSQHVHTCRSQSS*DGKLYCPRQFLQNNTFIV 188
Score = 56.5 bits (117), Expect(3) = 2e-034
Identities = 21/25 (84%), Positives = 23/25 (92%)
Frame = -1 / -2
Query: 616 NHPSMCTHVEVEVLRMANFTIHHSS 542
NHPSMCTHVEV+VLRMANF +H SS
Sbjct: 285 NHPSMCTHVEVKVLRMANFIVHDSS 211
Score = 51.9 bits (107), Expect(3) = 2e-037
Identities = 21/24 (87%), Positives = 21/24 (87%)
Frame = +1 / +3
Query: 544 NCGG**SLPS*ELRLLHVCTCWDD 615
NC G *SLPS*EL LLHVCTCWDD
Sbjct: 213 NCRGQ*SLPS*EL*LLHVCTCWDD 284
Score = 51.0 bits (105), Expect(3) = 1e-023
Identities = 21/25 (84%), Positives = 22/25 (88%)
Frame = +3 / +2
Query: 543 ELWWIVKFAILRTSTSTCVHMLG*L 617
EL W +KFAILRT TSTCVHMLG*L
Sbjct: 212 ELSWTIKFAILRTLTSTCVHMLG*L 286
Score = 38.2 bits (77), Expect(3) = 1e-023
Identities = 17/35 (48%), Positives = 17/35 (48%)
Frame = +3 / +3
Query: 435 VSFWMRSGHPXXXXXXXXXXXXXXXFRRHHQTMFF 539
VSF MRSGHP FR HQTMFF
Sbjct: 3 VSFLMRSGHPSSL*LLLKRTTTPSFFRPDHQTMFF 107
>gb|CW041429.1|CW041429 104_274_10506544_116_30484 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10506544, DNA
sequence
Length = 679
Score = 97.3 bits (206), Expect(3) = 1e-053
Identities = 37/39 (94%), Positives = 37/39 (94%)
Frame = +2 / +2
Query: 434 CKFLDEKWSPKFTVIVAQKNHHTKFFQTASPDNVLPGTV 550
CKFLDEKWSPKFTVIVAQKNHHTKFFQT SPDNVLPG V
Sbjct: 2 CKFLDEKWSPKFTVIVAQKNHHTKFFQTGSPDNVLPGNV 118
Score = 92.7 bits (196), Expect(3) = 1e-047
Identities = 37/39 (94%), Positives = 38/39 (97%)
Frame = -2 / -2
Query: 549 TVPGRTLSGDAV*KNLVWWFF*ATITVNLGDHFSSRNLH 433
T+PGRTLSGD V*KNLVWWFF*ATITVNLGDHFSSRNLH
Sbjct: 117 TLPGRTLSGDPV*KNLVWWFF*ATITVNLGDHFSSRNLH 1
Score = 85.8 bits (181), Expect(3) = 1e-053
Identities = 34/40 (85%), Positives = 35/40 (87%)
Frame = +2 / +1
Query: 593 MCAHAGMIGTTRPTHYHVLHDEIGFSADEMQEFVHSLSYV 712
+CA GTTRPTHYHVLHDEIGFSADEMQEFVHSLSYV
Sbjct: 382 VCACCSYQGTTRPTHYHVLHDEIGFSADEMQEFVHSLSYV 501
Score = 84.9 bits (179), Expect(3) = 3e-041
Identities = 31/37 (83%), Positives = 35/37 (94%)
Frame = -3 / -3
Query: 545 FQEEHCLVMPSERTWCGGSFEQQSQ*TWVTTSHPETY 435
++EEHCLV+ SE+TWCGGSFEQQSQ*TWVTTSH ETY
Sbjct: 113 YREEHCLVIRSEKTWCGGSFEQQSQ*TWVTTSHQETY 3
Score = 80.8 bits (170), Expect(3) = 2e-037
Identities = 34/39 (87%), Positives = 34/39 (87%)
Frame = +1 / +1
Query: 433 M*VSG*EVVTQVHCDCCSKEPPHQVLSDGITRQCSSWNC 549
M*VS *EVVTQVHCDCCSKEPPHQV SD ITRQCSS C
Sbjct: 1 M*VS**EVVTQVHCDCCSKEPPHQVFSDRITRQCSSR*C 117
Score = 74.8 bits (157), Expect(3) = 1e-047
Identities = 34/40 (85%), Positives = 35/40 (87%)
Frame = -2 / -3
Query: 714 YT*DSE*TNSCISSAEKPISSCRT**WVGLVVPIIPACAH 595
YT*+SE*TNSCISSAEKPISSCRT**WVGLVVP AH
Sbjct: 503 YT*ESE*TNSCISSAEKPISSCRT**WVGLVVP*YEQQAH 384
Score = 69.8 bits (146), Expect(3) = 2e-034
Identities = 31/35 (88%), Positives = 33/35 (94%)
Frame = -1 / -1
Query: 538 KNIVW*CRLKELGVVVLLSNNHSELG*PLLIQKLT 434
KNIVW* LK+LGVVVLLSNNHSELG*PLLI+KLT
Sbjct: 106 KNIVW*SGLKKLGVVVLLSNNHSELG*PLLIKKLT 2
Score = 67.0 bits (140), Expect(3) = 1e-053
Identities = 24/25 (96%), Positives = 25/25 (100%)
Frame = +2 / +1
Query: 542 GTVVDSKVCHPKNFDFYMCAHAGMI 616
GTVVD+KVCHPKNFDFYMCAHAGMI
Sbjct: 211 GTVVDNKVCHPKNFDFYMCAHAGMI 285
Score = 67.0 bits (140), Expect(3) = 3e-041
Identities = 25/33 (75%), Positives = 29/33 (87%)
Frame = -1 / -2
Query: 715 VHVR*RMNKLLHLVCRETYLVVQNMIVGGPCCS 617
+H+R RMNKLLH V RETYL+VQNMI+G PCCS
Sbjct: 504 LHIRERMNKLLHFVSRETYLIVQNMIMGRPCCS 406
Score = 62.5 bits (130), Expect(3) = 1e-047
Identities = 25/25 (100%), Positives = 25/25 (100%)
Frame = -2 / -3
Query: 615 IIPACAHM*KSKFLGWQTLLSTTVP 541
IIPACAHM*KSKFLGWQTLLSTTVP
Sbjct: 284 IIPACAHM*KSKFLGWQTLLSTTVP 210
Score = 62.5 bits (130), Expect(3) = 2e-037
Identities = 27/40 (67%), Positives = 30/40 (75%)
Frame = +1 / +3
Query: 595 VCTCWDDWNNKAHPLSCSARRDRFLCRRDAGVCSFAILRV 714
+C NNKA PLSCSAR DRFLC R+AGVCSFA+L V
Sbjct: 384 MCLLLVSGNNKADPLSCSAR*DRFLC*RNAGVCSFALLCV 503
Score = 59.3 bits (123), Expect(3) = 1e-023
Identities = 25/32 (78%), Positives = 26/32 (81%)
Frame = +3 / +2
Query: 618 EQQGPPTIMFCTTR*VSLQTRCRSLFIRYLTC 713
EQQG P IMFCT R*VSL T+CRSLFIR L C
Sbjct: 407 EQQGRPIIMFCTMR*VSLLTKCRSLFIRSLMC 502
Score = 59.3 bits (123), Expect(3) = 2e-034
Identities = 26/39 (66%), Positives = 28/39 (71%)
Frame = -3 / -1
Query: 713 TRKIANEQTPASRLQRNLSRRAEHDSGWALLFQSSQHVH 597
T K ANEQTPA R QRNLS RAEHD+G ALLF + H
Sbjct: 502 THKRANEQTPAFRQQRNLSHRAEHDNGSALLFPDTSSKH 386
Score = 56.5 bits (117), Expect(3) = 3e-041
Identities = 22/33 (66%), Positives = 27/33 (81%)
Frame = -3 / -1
Query: 617 QSSQHVHTCRSRSS*DGKLYYPPQFQEEHCLVM 519
QSSQHVHTCRS+SS*DGKLY P QF + + ++
Sbjct: 286 QSSQHVHTCRSQSS*DGKLYCPRQFLQNNTFIV 188
Score = 56.5 bits (117), Expect(3) = 2e-034
Identities = 21/25 (84%), Positives = 23/25 (92%)
Frame = -1 / -2
Query: 616 NHPSMCTHVEVEVLRMANFTIHHSS 542
NHPSMCTHVEV+VLRMANF +H SS
Sbjct: 285 NHPSMCTHVEVKVLRMANFIVHDSS 211
Score = 51.9 bits (107), Expect(3) = 2e-037
Identities = 21/24 (87%), Positives = 21/24 (87%)
Frame = +1 / +3
Query: 544 NCGG**SLPS*ELRLLHVCTCWDD 615
NC G *SLPS*EL LLHVCTCWDD
Sbjct: 213 NCRGQ*SLPS*EL*LLHVCTCWDD 284
Score = 51.0 bits (105), Expect(3) = 1e-023
Identities = 21/25 (84%), Positives = 22/25 (88%)
Frame = +3 / +2
Query: 543 ELWWIVKFAILRTSTSTCVHMLG*L 617
EL W +KFAILRT TSTCVHMLG*L
Sbjct: 212 ELSWTIKFAILRTLTSTCVHMLG*L 286
Score = 38.2 bits (77), Expect(3) = 1e-023
Identities = 17/35 (48%), Positives = 17/35 (48%)
Frame = +3 / +3
Query: 435 VSFWMRSGHPXXXXXXXXXXXXXXXFRRHHQTMFF 539
VSF MRSGHP FR HQTMFF
Sbjct: 3 VSFLMRSGHPSSL*LLLKRTTTPSFFRPDHQTMFF 107
>gb|CF482007.1|CF482007 POL1_76_B05.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_76_B05_A002 3', mRNA sequence
Length = 683
Score = 199 bits (429), Expect = 4e-050
Identities = 73/93 (78%), Positives = 84/93 (90%)
Frame = +2 / +3
Query: 437 KFLDEKWSPKFTVIVAQKNHHTKFFQTASPDNVLPGTVVDSKVCHPKNFDFYMCAHAGMI 616
KFLDEKW+PKFT+I+AQKNHHTKFF +NV GTVVD+KVCHP+NFDFYMC+HAGMI
Sbjct: 3 KFLDEKWNPKFTLIIAQKNHHTKFFIPGKTENVPAGTVVDNKVCHPRNFDFYMCSHAGMI 182
Query: 617 GTTRPTHYHVLHDEIGFSADEMQEFVHSLSYVY 715
GTTRPTHYH+LHDEIGF+ D++QE VHSLSYVY
Sbjct: 183 GTTRPTHYHILHDEIGFNPDDLQELVHSLSYVY 281
Score = 135 bits (290), Expect = 6e-031
Identities = 67/93 (72%), Positives = 70/93 (75%)
Frame = -2 / -2
Query: 714 YT*DSE*TNSCISSAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPGR 535
YT*+SE T+SC SS KPISSC ** VGLVVPIIPAC HM*KSKFLG QTLLSTTVP
Sbjct: 280 YT*ESECTSSCRSSGLKPISSCSI***VGLVVPIIPACEHM*KSKFLG*QTLLSTTVPAG 101
Query: 534 TLSGDAV*KNLVWWFF*ATITVNLGDHFSSRNL 436
T S KNLVW FF A I VN G HFSS+NL
Sbjct: 100 TFSVFPGIKNLVW*FFWAIINVNFGFHFSSKNL 2
Score = 98.2 bits (208), Expect = 1e-019
Identities = 47/93 (50%), Positives = 60/93 (64%)
Frame = -1 / -1
Query: 715 VHVR*RMNKLLHLVCRETYLVVQNMIVGGPCCSNHPSMCTHVEVEVLRMANFTIHHSSRK 536
VHVR RM++LL ++ E YL++Q MI+ P +H SM THVEV+V M NF +H+SS
Sbjct: 281 VHVRERMHQLLQIIRIEAYLIMQYMIMSWPRSPDHSSM*THVEVKVPWMTNFVVHNSSSW 102
Query: 535 NIVW*CRLKELGVVVLLSNNHSELG*PLLIQKL 437
NI R K+ VV+LL NN EL P IQKL
Sbjct: 101 NIFCLSRNKKFSVVILLGNNQRELWIPFFIQKL 3
Score = 89.0 bits (188), Expect = 7e-017
Identities = 44/92 (47%), Positives = 58/92 (63%)
Frame = +1 / +2
Query: 439 VSG*EVVTQVHCDCCSKEPPHQVLSDGITRQCSSWNCGG**SLPS*ELRLLHVCTCWDDW 618
V G*++ ++VH D C +E PH + R+CSSWNC G SL S EL LLHV TCW+D
Sbjct: 5 VFG*KMESKVHVDYCPEESPH*IFYSWKDRKCSSWNCCGQQSLSSKEL*LLHVFTCWNDR 184
Query: 619 NNKAHPLSCSARRDRFLCRRDAGVCSFAILRV 714
+ +A+ LS +A DR AG +FA+LRV
Sbjct: 185 DYEANSLSYTA**DRLQS**SAGAGAFALLRV 280
Score = 75.3 bits (158), Expect = 9e-013
Identities = 42/92 (45%), Positives = 51/92 (55%)
Frame = -3 / -3
Query: 713 TRKIANEQTPASRLQRNLSRRAEHDSGWALLFQSSQHVHTCRSRSS*DGKLYYPPQFQEE 534
TRK AN PA +LS A +D+ A +S QHV+TCRS+SS D KL P QFQ E
Sbjct: 279 TRKRANAPAPADHQD*SLSHHAVYDNELAS*SRSFQHVNTCRSQSSLDDKLCCPQQFQLE 100
Query: 533 HCLVMPSERTWCGGSFEQQSQ*TWVTTSHPET 438
H L + CG S Q S *T + HP+T
Sbjct: 99 HFLSFQE*KI*CGDSSGQ*ST*TLDSIFHPKT 4
Score = 69.8 bits (146), Expect = 4e-011
Identities = 34/63 (53%), Positives = 38/63 (60%)
Frame = +3 / +1
Query: 525 QTMFFLELWWIVKFAILRTSTSTCVHMLG*LEQQGPPTIMFCTTR*VSLQTRCRSLFIRY 704
Q MF LEL W KF I T TSTCVHML * +G I++C R* S+ CRS IR
Sbjct: 91 QKMFQLELLWTTKFVIQGTLTSTCVHMLE*SGLRGQLIIIYCMMR*ASILMICRSWCIRS 270
Query: 705 LTC 713
LTC
Sbjct: 271 LTC 279
>gb|CF488045.1|CF488045 POL1_47_A08.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_47_A08_A002 5', mRNA sequence
Length = 763
Score = 111 bits (237), Expect(3) = 8e-048
Identities = 40/67 (59%), Positives = 51/67 (76%)
Frame = +2 / +3
Query: 515 TASPDNVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFSADEMQEFV 694
T N+LPGTVVD+ +CHP FDFY+C+HAG+ GT+RPTHYHVL+DE FSAD +Q
Sbjct: 441 TDKSGNILPGTVVDTSICHPSEFDFYLCSHAGIKGTSRPTHYHVLYDENRFSADALQFLT 620
Query: 695 HSLSYVY 715
++L Y Y
Sbjct: 621 NNLCYTY 641
Score = 77.6 bits (163), Expect(3) = 8e-048
Identities = 32/80 (40%), Positives = 49/80 (61%)
Frame = +2 / +3
Query: 272 RGTDDDGLIRESLIDFYTSSGKRKPEHIIIFRDGVSESQFTQVINIELDQIIEACKFLDE 451
+GT +G + L+ + RKP+ II +RDGVSE QF+ V+ E+D I +AC +++
Sbjct: 174 KGTPVNGGMIRELLTSFFKRTGRKPKRIIFYRDGVSEGQFSHVLLHEMDAIRKACASMED 353
Query: 452 KWSPKFTVIVAQKNHHTKFF 511
+ P T +V QK HHT+ F
Sbjct: 354 GYLPPVTFVVVQKRHHTRLF 413
Score = 65.2 bits (136), Expect(3) = 5e-020
Identities = 33/51 (64%), Positives = 38/51 (74%)
Frame = -2 / -1
Query: 687 SCISSAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPGR 535
+C +SAEK SS RT** VGL+VP+IPA *KS LG Q L+STTVPGR
Sbjct: 613 NCRASAEKRFSS*RT**CVGLLVPLIPAWLQR*KSNSLG*QMLVSTTVPGR 461
Score = 62.9 bits (131), Expect(2) = 7e-010
Identities = 25/52 (48%), Positives = 37/52 (71%)
Frame = -1 / -3
Query: 685 LHLVCRETYLVVQNMIVGGPCCSNHPSMCTHVEVEVLRMANFTIHHSSRKNI 530
L + RET L++++MIV P CS + SM T VE+++ M N +I+HSSRKN+
Sbjct: 611 LQSISRETVLIIEDMIVCWPACSLNSSMATEVEIKLAGMTNASINHSSRKNV 456
Score = 44.6 bits (91), Expect(3) = 5e-020
Identities = 27/58 (46%), Positives = 31/58 (53%)
Frame = -2 / -1
Query: 510 KNLVWWFF*ATITVNLGDHFSSRNLHASMI*SSSMLMTWVN*LSLTPSLKIIMCSGFR 337
K+LVW F T V G SS A +I S S TW+N SLTPSL I+ GFR
Sbjct: 412 KSLVWCLFCTTTNVTGGR*PSSIEAQAFLIASISWSKTWLNCPSLTPSL*NIILLGFR 239
Score = 41.8 bits (85), Expect(2) = 3e-004
Identities = 24/50 (48%), Positives = 26/50 (52%)
Frame = +3 / +1
Query: 534 FFLELWWIVKFAILRTSTSTCVHMLG*LEQQGPPTIMFCTTR*VSLQTRC 683
FFLELW I+ F I + ST V ML EQ G TIM R VS C
Sbjct: 460 FFLELWLILAFVIPASLISTSVAMLELREQAGQHTIMSSMMRTVSRLMLC 609
Score = 41.4 bits (84), Expect(3) = 8e-048
Identities = 16/35 (45%), Positives = 25/35 (71%)
Frame = +2 / +3
Query: 161 SVAAVVSSRQWPLISRYRASVHTQSARLEMMSSLF 265
S+AAVV+S WP ++ Y+A V Q+ R E++ +LF
Sbjct: 48 SIAAVVASMDWPQVTTYKALVSAQAHREEIIQNLF 152
Score = 40.9 bits (83), Expect = 0.021
Identities = 22/50 (44%), Positives = 26/50 (52%)
Frame = -3 / -2
Query: 683 ASRLQRNLSRRAEHDSGWALLFQSSQHVHTCRSRSS*DGKLYYPPQFQEE 534
A RN S HDS A LF QH + R+++ D K Y PQFQEE
Sbjct: 609 AEHQPRNGSHHRGHDSVLACLFP*FQHGYRGRNQTRWDDKC*YQPQFQEE 460
Score = 37.7 bits (76), Expect = 0.19
Identities = 18/40 (45%), Positives = 24/40 (60%)
Frame = +1 / +2
Query: 526 RQCSSWNCGG**SLPS*ELRLLHVCTCWDDWNNKAHPLSC 645
R+ SSWNCG * L S + L + CW+ N +A+ LSC
Sbjct: 452 RKHSSWNCG*Y*HLSSQRV*FLPL*PCWN*GNKQANTLSC 571
Score = 26.3 bits (51), Expect(3) = 5e-020
Identities = 15/31 (48%), Positives = 17/31 (54%)
Frame = -2 / -1
Query: 252 IISSLADWVCTDALYLEIRGH*RELTTAATE 160
IISSL T ALY+ G + TTAA E
Sbjct: 139 IISSLCACAETSALYVVTCGQSMDATTAAIE 47
Score = 23.5 bits (45), Expect(2) = 7e-010
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = -1 / -3
Query: 220 *CSISRDKRPLTRTNHRCNR 161
*C I D P+ NH CNR
Sbjct: 107 *CFICCDLWPVHGCNHSCNR 48
Score = 23.1 bits (44), Expect(2) = 3e-004
Identities = 9/29 (31%), Positives = 15/29 (51%)
Frame = +3 / +1
Query: 360 FSGMESVKVSLPRSSTLSWIRSSRHVSFW 446
F+GM V+ + ++ W +S R V W
Sbjct: 262 FTGMV*VRDNSATFCSMKWTQSGRPVPLW 348
>gb|DN551899.1|DN551899 pSPR-RT-MR-H1_B06_S170 pSPR Sorghum propinquum cDNA, mRNA sequence
Length = 884
Score = 110 bits (235), Expect(2) = 6e-041
Identities = 41/75 (54%), Positives = 52/75 (69%)
Frame = +2 / -2
Query: 491 NHHTKFFQTASPDNVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFS 670
N+H N+LPGTVVDSK+CHP FDFY+C+HAG+ GT+RP HYHVL DE F+
Sbjct: 643 NNHNDQRAVDKSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFT 464
Query: 671 ADEMQEFVHSLSYVY 715
AD +Q ++L Y Y
Sbjct: 463 ADGLQTLTNNLCYTY 419
Score = 78.5 bits (165), Expect(2) = 6e-041
Identities = 33/68 (48%), Positives = 44/68 (64%)
Frame = +2 / -2
Query: 308 LIDFYTSSGKRKPEHIIIFRDGVSESQFTQVINIELDQIIEACKFLDEKWSPKFTVIVAQ 487
L+ + S K+KP+ II +RDGVSE QF QV+ ELD I +AC L+ + P T +V Q
Sbjct: 850 LLISFWRSTKQKPKRIIFYRDGVSEGQFYQVLLHELDAIRKACASLESDYQPPVTFVVVQ 671
Query: 488 KNHHTKFF 511
K HHT+ F
Sbjct: 670 KRHHTRLF 647
Score = 55.1 bits (114), Expect(2) = 2e-010
Identities = 27/49 (55%), Positives = 30/49 (61%)
Frame = -2 / +3
Query: 684 CISSAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPG 538
C SA SS RT**W G +VP +PA *KS +GWQ STTVPG
Sbjct: 450 CNPSAVNLFSSHRT**WAGRLVP*MPAWLQR*KSNSVGWQIFESTTVPG 596
Score = 45.1 bits (92), Expect = 0.001
Identities = 18/43 (41%), Positives = 29/43 (67%)
Frame = -1 / +2
Query: 658 LVVQNMIVGGPCCSNHPSMCTHVEVEVLRMANFTIHHSSRKNI 530
L+ Q+MI+G CS + SM T VE++ MA+ +HHS+R+ +
Sbjct: 476 LIPQDMIMGRAACSLNASMATEVEIKFSWMADL*VHHSTRQYV 604
Score = 34.5 bits (69), Expect = 1.8
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = +1 / -1
Query: 535 SSWNCGG**SLPS*ELRLLHVCTCWDDWNNKAHPLSC 645
++W CGG LPS + L + CW N PLSC
Sbjct: 599 TAWYCGGLKDLPSN*I*FLPL*PCWHSGNKPPCPLSC 489
Score = 34.1 bits (68), Expect = 2.4
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = -3 / +1
Query: 644 HDSGWALLFQSSQHVHTCRSRSS*DGKLYYPPQFQ 540
HD+G LF QH + R++ DG+ PPQ+Q
Sbjct: 490 HDNGQGGLFPECQHGYRGRNQIQLDGRSLSPPQYQ 594
Score = 30.9 bits (61), Expect(2) = 2e-010
Identities = 24/61 (39%), Positives = 30/61 (49%)
Frame = -2 / +3
Query: 507 NLVWWFF*ATITVNLGDHFSSRNLHASMI*SSSMLMTWVN*LSLTPSLKIIMCSGFRFPE 328
NLV F T V G S + A ++ SSS TW N SLTPSL ++ GF +
Sbjct: 651 NLV**RFWTTTNVTGGW*SDSNDAQAFLMASSSCNRTW*NCPSLTPSL*NMILFGFCLVD 830
Query: 327 L 325
L
Sbjct: 831 L 833
>gb|BE593425.1|BE593425 WS1_97_F09.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 515
Score = 110 bits (235), Expect(2) = 6e-041
Identities = 41/75 (54%), Positives = 52/75 (69%)
Frame = +2 / +3
Query: 491 NHHTKFFQTASPDNVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFS 670
N+H N+LPGTVVDSK+CHP FDFY+C+HAG+ GT+RP HYHVL DE F+
Sbjct: 234 NNHNDQRAVDKSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFT 413
Query: 671 ADEMQEFVHSLSYVY 715
AD +Q ++L Y Y
Sbjct: 414 ADGLQTLTNNLCYTY 458
Score = 78.5 bits (165), Expect(2) = 6e-041
Identities = 33/68 (48%), Positives = 44/68 (64%)
Frame = +2 / +3
Query: 308 LIDFYTSSGKRKPEHIIIFRDGVSESQFTQVINIELDQIIEACKFLDEKWSPKFTVIVAQ 487
L+ + S K+KP+ II +RDGVSE QF QV+ ELD I +AC L+ + P T +V Q
Sbjct: 27 LLISFWRSTKQKPKRIIFYRDGVSEGQFYQVLLHELDAIRKACASLESDYQPPVTFVVVQ 206
Query: 488 KNHHTKFF 511
K HHT+ F
Sbjct: 207 KRHHTRLF 230
Score = 55.1 bits (114), Expect(2) = 2e-010
Identities = 27/49 (55%), Positives = 30/49 (61%)
Frame = -2 / -2
Query: 684 CISSAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPG 538
C SA SS RT**W G +VP +PA *KS +GWQ STTVPG
Sbjct: 427 CNPSAVNLFSSHRT**WAGRLVP*MPAWLQR*KSNSVGWQIFESTTVPG 281
Score = 45.1 bits (92), Expect = 0.001
Identities = 18/43 (41%), Positives = 29/43 (67%)
Frame = -1 / -1
Query: 658 LVVQNMIVGGPCCSNHPSMCTHVEVEVLRMANFTIHHSSRKNI 530
L+ Q+MI+G CS + SM T VE++ MA+ +HHS+R+ +
Sbjct: 401 LIPQDMIMGRAACSLNASMATEVEIKFSWMADL*VHHSTRQYV 273
Score = 34.5 bits (69), Expect = 1.8
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = +1 / +2
Query: 535 SSWNCGG**SLPS*ELRLLHVCTCWDDWNNKAHPLSC 645
++W CGG LPS + L + CW N PLSC
Sbjct: 278 TAWYCGGLKDLPSN*I*FLPL*PCWHSGNKPPCPLSC 388
Score = 34.1 bits (68), Expect = 2.4
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = -3 / -3
Query: 644 HDSGWALLFQSSQHVHTCRSRSS*DGKLYYPPQFQ 540
HD+G LF QH + R++ DG+ PPQ+Q
Sbjct: 387 HDNGQGGLFPECQHGYRGRNQIQLDGRSLSPPQYQ 283
Score = 30.9 bits (61), Expect(2) = 2e-010
Identities = 24/61 (39%), Positives = 30/61 (49%)
Frame = -2 / -2
Query: 507 NLVWWFF*ATITVNLGDHFSSRNLHASMI*SSSMLMTWVN*LSLTPSLKIIMCSGFRFPE 328
NLV F T V G S + A ++ SSS TW N SLTPSL ++ GF +
Sbjct: 226 NLV**RFWTTTNVTGGW*SDSNDAQAFLMASSSCNRTW*NCPSLTPSL*NMILFGFCLVD 47
Query: 327 L 325
L
Sbjct: 46 L 44
>gb|BG649190.1|BG649190 EM1_77_G11.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 602
Score = 165 bits (355), Expect = 6e-040
Identities = 61/78 (78%), Positives = 69/78 (88%)
Frame = +2 / +3
Query: 482 AQKNHHTKFFQTASPDNVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEI 661
AQKNHHTKFF +NV GTVVD+KVCHP+NFDFYMC+HAGMIGTTRPTHYH+LHDEI
Sbjct: 3 AQKNHHTKFFIPGKTENVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEI 182
Query: 662 GFSADEMQEFVHSLSYVY 715
GF+ D++QE VHSLSYVY
Sbjct: 183 GFNPDDLQELVHSLSYVY 236
Score = 112 bits (240), Expect = 5e-024
Identities = 56/76 (73%), Positives = 58/76 (76%)
Frame = -2 / -2
Query: 714 YT*DSE*TNSCISSAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPGR 535
YT*+SE T+SC SS KPISSC ** VGLVVPIIPAC HM*KSKFLG QTLLSTTVP
Sbjct: 235 YT*ESECTSSCRSSGLKPISSCSI***VGLVVPIIPACEHM*KSKFLG*QTLLSTTVPAG 56
Query: 534 TLSGDAV*KNLVWWFF 487
T S KNLVW FF
Sbjct: 55 TFSVFPGIKNLVW*FF 8
Score = 80.3 bits (169), Expect = 3e-014
Identities = 38/77 (49%), Positives = 51/77 (66%)
Frame = -1 / -1
Query: 715 VHVR*RMNKLLHLVCRETYLVVQNMIVGGPCCSNHPSMCTHVEVEVLRMANFTIHHSSRK 536
VHVR RM++LL ++ E YL++Q MI+ P +H SM THVEV+V M NF +H+SS
Sbjct: 236 VHVRERMHQLLQIIRIEAYLIMQYMIMSWPRSPDHSSM*THVEVKVPWMTNFVVHNSSSW 57
Query: 535 NIVW*CRLKELGVVVLL 485
NI R K+ VV+LL
Sbjct: 56 NIFCLSRNKKFSVVILL 6
Score = 77.1 bits (162), Expect = 3e-013
Identities = 38/78 (48%), Positives = 48/78 (61%)
Frame = +1 / +2
Query: 481 CSKEPPHQVLSDGITRQCSSWNCGG**SLPS*ELRLLHVCTCWDDWNNKAHPLSCSARRD 660
C +E PH + R+CSSWNC G SL S EL LLHV TCW+D + +A+ LS +A D
Sbjct: 2 CPEESPH*IFYSWKDRKCSSWNCCGQQSLSSKEL*LLHVFTCWNDRDYEANSLSYTA**D 181
Query: 661 RFLCRRDAGVCSFAILRV 714
R AG +FA+LRV
Sbjct: 182 RLQS**SAGAGAFALLRV 235
Score = 69.8 bits (146), Expect = 4e-011
Identities = 34/63 (53%), Positives = 38/63 (60%)
Frame = +3 / +1
Query: 525 QTMFFLELWWIVKFAILRTSTSTCVHMLG*LEQQGPPTIMFCTTR*VSLQTRCRSLFIRY 704
Q MF LEL W KF I T TSTCVHML * +G I++C R* S+ CRS IR
Sbjct: 46 QKMFQLELLWTTKFVIQGTLTSTCVHMLE*SGLRGQLIIIYCMMR*ASILMICRSWCIRS 225
Query: 705 LTC 713
LTC
Sbjct: 226 LTC 234
Score = 66.6 bits (139), Expect = 4e-010
Identities = 36/78 (46%), Positives = 43/78 (55%)
Frame = -3 / -3
Query: 713 TRKIANEQTPASRLQRNLSRRAEHDSGWALLFQSSQHVHTCRSRSS*DGKLYYPPQFQEE 534
TRK AN PA +LS A +D+ A +S QHV+TCRS+SS D KL P QFQ E
Sbjct: 234 TRKRANAPAPADHQD*SLSHHAVYDNELAS*SRSFQHVNTCRSQSSLDDKLCCPQQFQLE 55
Query: 533 HCLVMPSERTWCGGSFEQ 480
H L + CG S Q
Sbjct: 54 HFLSFQE*KI*CGDSSGQ 1
>gb|BF176662.1|BF176662 EM1_1_E11.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 627
Score = 159 bits (342), Expect = 4e-038
Identities = 61/62 (98%), Positives = 62/62 (100%)
Frame = +2 / +1
Query: 530 NVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFSADEMQEFVHSLSY 709
NVLPGTVVD+KVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFSADEMQEFVHSLSY
Sbjct: 1 NVLPGTVVDNKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFSADEMQEFVHSLSY 180
Query: 710 VY 715
VY
Sbjct: 181 VY 186
Score = 140 bits (301), Expect = 2e-032
Identities = 60/61 (98%), Positives = 61/61 (100%)
Frame = -2 / -2
Query: 714 YT*DSE*TNSCISSAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPGR 535
YT*+SE*TNSCISSAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPGR
Sbjct: 185 YT*ESE*TNSCISSAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPGR 6
Query: 534 T 532
T
Sbjct: 5 T 3
Score = 127 bits (272), Expect = 2e-028
Identities = 49/62 (79%), Positives = 55/62 (88%)
Frame = -1 / -1
Query: 715 VHVR*RMNKLLHLVCRETYLVVQNMIVGGPCCSNHPSMCTHVEVEVLRMANFTIHHSSRK 536
+H+R RMNKLLH V RETYL+VQNMI+G PCCSNHPSMCTHVEV+VLRMANF +H SS K
Sbjct: 186 IHIRERMNKLLHFVSRETYLIVQNMIMGRPCCSNHPSMCTHVEVKVLRMANFIVHDSSGK 7
Query: 535 NI 530
NI
Sbjct: 6 NI 1
Score = 122 bits (261), Expect = 6e-027
Identities = 51/61 (83%), Positives = 53/61 (86%)
Frame = +1 / +3
Query: 532 CSSWNCGG**SLPS*ELRLLHVCTCWDDWNNKAHPLSCSARRDRFLCRRDAGVCSFAILR 711
CSS NC G *SLPS*EL LLHVCTCWDDWNNKA PLSCSAR DRFLC R+AGVCSFA+L
Sbjct: 3 CSSRNCRGQ*SLPS*EL*LLHVCTCWDDWNNKADPLSCSAR*DRFLC*RNAGVCSFALLC 182
Query: 712 V 714
V
Sbjct: 183 V 185
Score = 117 bits (250), Expect = 2e-025
Identities = 50/61 (81%), Positives = 53/61 (86%)
Frame = -3 / -3
Query: 713 TRKIANEQTPASRLQRNLSRRAEHDSGWALLFQSSQHVHTCRSRSS*DGKLYYPPQFQEE 534
T K ANEQTPA R QRNLS RAEHD+G ALLFQSSQHVHTCRS+SS*DGKLY P QF+EE
Sbjct: 184 THKRANEQTPAFRQQRNLSHRAEHDNGSALLFQSSQHVHTCRSQSS*DGKLYCPRQFREE 5
Query: 533 H 531
H
Sbjct: 4 H 2
Score = 113 bits (242), Expect = 2e-024
Identities = 49/61 (80%), Positives = 51/61 (83%)
Frame = +3 / +2
Query: 531 MFFLELWWIVKFAILRTSTSTCVHMLG*LEQQGPPTIMFCTTR*VSLQTRCRSLFIRYLT 710
MFF EL W +KFAILRT TSTCVHMLG*LEQQG P IMFCT R*VSL T+CRSLFIR L
Sbjct: 2 MFFPELSWTIKFAILRTLTSTCVHMLG*LEQQGRPIIMFCTMR*VSLLTKCRSLFIRSLM 181
Query: 711 C 713
C
Sbjct: 182 C 184
>gb|CF428487.1|CF428487 PH1_15_D10.g1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_15_D10_A002 5', mRNA sequence
Length = 509
Score = 106 bits (226), Expect(2) = 4e-035
Identities = 38/52 (73%), Positives = 45/52 (86%)
Frame = +2 / +3
Query: 530 NVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFSADEMQ 685
N+LPGTVVDSK+CHP FDFY+C+HAG+ GT+RP HYHVL DE FSADE+Q
Sbjct: 354 NILPGTVVDSKICHPTEFDFYLCSHAGIKGTSRPAHYHVLWDENNFSADELQ 509
Score = 62.9 bits (131), Expect(2) = 4e-035
Identities = 25/48 (52%), Positives = 33/48 (68%)
Frame = +2 / +3
Query: 368 DGVSESQFTQVINIELDQIIEACKFLDEKWSPKFTVIVAQKNHHTKFF 511
DGVSE QF QV+ EL+ I +AC L+ ++ PK T +V QK HHT+ F
Sbjct: 168 DGVSEGQFYQVLLYELNAIRKACASLEAEYQPKVTFVVVQKRHHTRLF 311
Score = 54.2 bits (112), Expect(2) = 1e-010
Identities = 28/49 (57%), Positives = 33/49 (67%)
Frame = -2 / -2
Query: 684 CISSAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPG 538
C SSAEK SS +T** G +VP++PA H *KS +G Q STTVPG
Sbjct: 508 CNSSAEKLFSSHKT***AGRLVPLMPAWLHK*KSNSVG*QIFESTTVPG 362
Score = 32.7 bits (65), Expect(2) = 1e-010
Identities = 22/47 (46%), Positives = 24/47 (51%)
Frame = -2 / -2
Query: 507 NLVWWFF*ATITVNLGDHFSSRNLHASMI*SSSMLMTWVN*LSLTPS 367
NLV W F* T V G + +SR A I SS T N SLTPS
Sbjct: 307 NLV*WRF*TTTKVTFGWYSASREAQAFRIALSSYNRT**NCPSLTPS 167
>gb|CW083677.1|CW083677 104_426_10945316_116_32439_080 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10945316, DNA
sequence
Length = 425
Score = 101 bits (215), Expect(2) = 8e-035
Identities = 38/43 (88%), Positives = 41/43 (95%)
Frame = +2 / +3
Query: 422 IIEACKFLDEKWSPKFTVIVAQKNHHTKFFQTASPDNVLPGTV 550
+++ACKFLDEKWSPKFTVIVAQKNHHTKFFQT SPDNVLPG V
Sbjct: 12 LMQACKFLDEKWSPKFTVIVAQKNHHTKFFQTGSPDNVLPGNV 140
Score = 94.5 bits (200), Expect(2) = 2e-031
Identities = 38/40 (95%), Positives = 39/40 (97%)
Frame = -2 / -2
Query: 549 TVPGRTLSGDAV*KNLVWWFF*ATITVNLGDHFSSRNLHA 430
T+PGRTLSGD V*KNLVWWFF*ATITVNLGDHFSSRNLHA
Sbjct: 139 TLPGRTLSGDPV*KNLVWWFF*ATITVNLGDHFSSRNLHA 20
Score = 90.4 bits (191), Expect(2) = 2e-028
Identities = 33/39 (84%), Positives = 37/39 (94%)
Frame = -3 / -3
Query: 545 FQEEHCLVMPSERTWCGGSFEQQSQ*TWVTTSHPETYMP 429
++EEHCLV+ SE+TWCGGSFEQQSQ*TWVTTSH ETYMP
Sbjct: 135 YREEHCLVIRSEKTWCGGSFEQQSQ*TWVTTSHQETYMP 19
Score = 83.5 bits (176), Expect(2) = 5e-025
Identities = 35/40 (87%), Positives = 35/40 (87%)
Frame = +1 / +2
Query: 430 GM*VSG*EVVTQVHCDCCSKEPPHQVLSDGITRQCSSWNC 549
GM*VS *EVVTQVHCDCCSKEPPHQV SD ITRQCSS C
Sbjct: 20 GM*VS**EVVTQVHCDCCSKEPPHQVFSDRITRQCSSR*C 139
Score = 75.8 bits (159), Expect(2) = 5e-024
Identities = 33/37 (89%), Positives = 35/37 (94%)
Frame = -1 / -1
Query: 538 KNIVW*CRLKELGVVVLLSNNHSELG*PLLIQKLTCL 428
KNIVW* LK+LGVVVLLSNNHSELG*PLLI+KLTCL
Sbjct: 128 KNIVW*SGLKKLGVVVLLSNNHSELG*PLLIKKLTCL 18
Score = 67.0 bits (140), Expect(2) = 8e-035
Identities = 24/25 (96%), Positives = 25/25 (100%)
Frame = +2 / +2
Query: 542 GTVVDSKVCHPKNFDFYMCAHAGMI 616
GTVVD+KVCHPKNFDFYMCAHAGMI
Sbjct: 233 GTVVDNKVCHPKNFDFYMCAHAGMI 307
Score = 62.5 bits (130), Expect(2) = 2e-031
Identities = 25/25 (100%), Positives = 25/25 (100%)
Frame = -2 / -3
Query: 615 IIPACAHM*KSKFLGWQTLLSTTVP 541
IIPACAHM*KSKFLGWQTLLSTTVP
Sbjct: 306 IIPACAHM*KSKFLGWQTLLSTTVP 232
Score = 56.5 bits (117), Expect(2) = 2e-028
Identities = 22/33 (66%), Positives = 27/33 (81%)
Frame = -3 / -1
Query: 617 QSSQHVHTCRSRSS*DGKLYYPPQFQEEHCLVM 519
QSSQHVHTCRS+SS*DGKLY P QF + + ++
Sbjct: 308 QSSQHVHTCRSQSS*DGKLYCPRQFLQNNTFIV 210
Score = 56.5 bits (117), Expect(2) = 5e-024
Identities = 21/25 (84%), Positives = 23/25 (92%)
Frame = -1 / -2
Query: 616 NHPSMCTHVEVEVLRMANFTIHHSS 542
NHPSMCTHVEV+VLRMANF +H SS
Sbjct: 307 NHPSMCTHVEVKVLRMANFIVHDSS 233
Score = 51.9 bits (107), Expect(2) = 5e-025
Identities = 21/24 (87%), Positives = 21/24 (87%)
Frame = +1 / +1
Query: 544 NCGG**SLPS*ELRLLHVCTCWDD 615
NC G *SLPS*EL LLHVCTCWDD
Sbjct: 235 NCRGQ*SLPS*EL*LLHVCTCWDD 306
Score = 51.0 bits (105), Expect(2) = 5e-013
Identities = 21/25 (84%), Positives = 22/25 (88%)
Frame = +3 / +3
Query: 543 ELWWIVKFAILRTSTSTCVHMLG*L 617
EL W +KFAILRT TSTCVHMLG*L
Sbjct: 234 ELSWTIKFAILRTLTSTCVHMLG*L 308
Score = 44.1 bits (90), Expect(2) = 5e-013
Identities = 19/37 (51%), Positives = 19/37 (51%)
Frame = +3 / +1
Query: 429 RHVSFWMRSGHPXXXXXXXXXXXXXXXFRRHHQTMFF 539
RHVSF MRSGHP FR HQTMFF
Sbjct: 19 RHVSFLMRSGHPSSL*LLLKRTTTPSFFRPDHQTMFF 129
>gb|CN134426.1|CN134426 OX1_26_F12.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_26_F12_A002 3', mRNA sequence
Length = 733
Score = 146 bits (314), Expect = 3e-034
Identities = 54/71 (76%), Positives = 62/71 (87%)
Frame = +2 / +2
Query: 503 KFFQTASPDNVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFSADEM 682
KFF +NV GTVVD+KVCHP+NFDFYMC+HAGMIGTTRPTHYH+LHDEIGF+ D++
Sbjct: 2 KFFIPGKTENVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFNPDDL 181
Query: 683 QEFVHSLSYVY 715
QE VHSLSYVY
Sbjct: 182 QELVHSLSYVY 214
Score = 102 bits (217), Expect = 7e-021
Identities = 52/71 (73%), Positives = 54/71 (76%)
Frame = -2 / -2
Query: 714 YT*DSE*TNSCISSAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPGR 535
YT*+SE T+SC SS KPISSC ** VGLVVPIIPAC HM*KSKFLG QTLLSTTVP
Sbjct: 213 YT*ESECTSSCRSSGLKPISSCSI***VGLVVPIIPACEHM*KSKFLG*QTLLSTTVPAG 34
Query: 534 TLSGDAV*KNL 502
T S KNL
Sbjct: 33 TFSVFPGIKNL 1
Score = 72.1 bits (151), Expect = 9e-012
Identities = 34/63 (53%), Positives = 39/63 (61%)
Frame = +3 / +3
Query: 525 QTMFFLELWWIVKFAILRTSTSTCVHMLG*LEQQGPPTIMFCTTR*VSLQTRCRSLFIRY 704
Q MF LEL W KF I T TSTCVHML * +G I++C R* S+ CRS IR+
Sbjct: 24 QKMFQLELLWTTKFVIQGTLTSTCVHMLE*SGLRGQLIIIYCMMR*ASILMICRSWCIRF 203
Query: 705 LTC 713
LTC
Sbjct: 204 LTC 212
Score = 71.6 bits (150), Expect = 1e-011
Identities = 32/62 (51%), Positives = 43/62 (69%)
Frame = -1 / -1
Query: 715 VHVR*RMNKLLHLVCRETYLVVQNMIVGGPCCSNHPSMCTHVEVEVLRMANFTIHHSSRK 536
VHVR RM++LL ++ E YL++Q MI+ P +H SM THVEV+V M NF +H+SS
Sbjct: 214 VHVRKRMHQLLQIIRIEAYLIMQYMIMSWPRSPDHSSM*THVEVKVPWMTNFVVHNSSSW 35
Query: 535 NI 530
NI
Sbjct: 34 NI 29
Score = 67.5 bits (141), Expect = 2e-010
Identities = 34/63 (53%), Positives = 41/63 (65%)
Frame = +1 / +1
Query: 526 RQCSSWNCGG**SLPS*ELRLLHVCTCWDDWNNKAHPLSCSARRDRFLCRRDAGVCSFAI 705
R+CSSWNC G SL S EL LLHV TCW+D + +A+ LS +A DR AG +FA
Sbjct: 25 RKCSSWNCCGQQSLSSKEL*LLHVFTCWNDRDYEANSLSYTA**DRLQS**SAGAGAFAF 204
Query: 706 LRV 714
LRV
Sbjct: 205 LRV 213
Score = 62.5 bits (130), Expect = 7e-009
Identities = 32/63 (50%), Positives = 38/63 (60%)
Frame = -3 / -3
Query: 713 TRKIANEQTPASRLQRNLSRRAEHDSGWALLFQSSQHVHTCRSRSS*DGKLYYPPQFQEE 534
TRK AN PA +LS A +D+ A +S QHV+TCRS+SS D KL P QFQ E
Sbjct: 212 TRKKANAPAPADHQD*SLSHHAVYDNELAS*SRSFQHVNTCRSQSSLDDKLCCPQQFQLE 33
Query: 533 HCL 525
H L
Sbjct: 32 HFL 24
>gb|BF421511.1|BF421511 FM1_8_F10.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 624
Score = 144 bits (310), Expect = 1e-033
Identities = 55/56 (98%), Positives = 56/56 (100%)
Frame = +2 / +1
Query: 548 VVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFSADEMQEFVHSLSYVY 715
VVD+KVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFSADEMQEFVHSLSYVY
Sbjct: 1 VVDNKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFSADEMQEFVHSLSYVY 168
Score = 126 bits (269), Expect = 5e-028
Identities = 54/55 (98%), Positives = 55/55 (100%)
Frame = -2 / -2
Query: 714 YT*DSE*TNSCISSAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLST 550
YT*+SE*TNSCISSAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLST
Sbjct: 167 YT*ESE*TNSCISSAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLST 3
Score = 118 bits (252), Expect = 1e-025
Identities = 44/55 (80%), Positives = 50/55 (90%)
Frame = -1 / -1
Query: 715 VHVR*RMNKLLHLVCRETYLVVQNMIVGGPCCSNHPSMCTHVEVEVLRMANFTIH 551
+H+R RMNKLLH V RETYL+VQNMI+G PCCSNHPSMCTHVEV+VLRMANF +H
Sbjct: 168 IHIRERMNKLLHFVSRETYLIVQNMIMGRPCCSNHPSMCTHVEVKVLRMANFIVH 4
Score = 110 bits (234), Expect = 3e-023
Identities = 46/54 (85%), Positives = 48/54 (88%)
Frame = +1 / +3
Query: 553 G**SLPS*ELRLLHVCTCWDDWNNKAHPLSCSARRDRFLCRRDAGVCSFAILRV 714
G *SLPS*EL LLHVCTCWDDWNNKA PLSCSAR DRFLC R+AGVCSFA+L V
Sbjct: 6 GQ*SLPS*EL*LLHVCTCWDDWNNKADPLSCSAR*DRFLC*RNAGVCSFALLCV 167
Score = 104 bits (222), Expect = 1e-021
Identities = 45/54 (83%), Positives = 47/54 (87%)
Frame = -3 / -3
Query: 713 TRKIANEQTPASRLQRNLSRRAEHDSGWALLFQSSQHVHTCRSRSS*DGKLYYP 552
T K ANEQTPA R QRNLS RAEHD+G ALLFQSSQHVHTCRS+SS*DGKLY P
Sbjct: 166 THKRANEQTPAFRQQRNLSHRAEHDNGSALLFQSSQHVHTCRSQSS*DGKLYCP 5
Score = 104 bits (222), Expect = 1e-021
Identities = 44/54 (81%), Positives = 46/54 (85%)
Frame = +3 / +2
Query: 552 WIVKFAILRTSTSTCVHMLG*LEQQGPPTIMFCTTR*VSLQTRCRSLFIRYLTC 713
W +KFAILRT TSTCVHMLG*LEQQG P IMFCT R*VSL T+CRSLFIR L C
Sbjct: 5 WTIKFAILRTLTSTCVHMLG*LEQQGRPIIMFCTMR*VSLLTKCRSLFIRSLMC 166
>gb|CL187585.1|CL187585 104_403_10900988_114_32462_076 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10900988, DNA
sequence
Length = 683
Score = 74.8 bits (157), Expect(3) = 1e-032
Identities = 31/47 (65%), Positives = 39/47 (82%)
Frame = +2 / +3
Query: 35 KLGGLNSLLQVEASSSIPHVSQVPTIILGMDVSHGHPGQDRPSVAAV 175
+LGGLNSLL++E + +IP VS+VPTII GMDVSHG P + PS+AAV
Sbjct: 12 QLGGLNSLLEIERNQAIPIVSRVPTIIFGMDVSHGAPRSNVPSIAAV 152
Score = 67.0 bits (140), Expect(3) = 1e-032
Identities = 29/43 (67%), Positives = 34/43 (79%)
Frame = +2 / +2
Query: 173 VVSSRQWPLISRYRASVHTQSARLEMMSSLFKPRGTDDDGLIR 301
VVSS WP ISRYRASV T S R+E++ SLFKP+G +D GLIR
Sbjct: 284 VVSSLGWPCISRYRASVCTLSPRVEIIDSLFKPQGNEDRGLIR 412
Score = 58.8 bits (122), Expect(3) = 1e-012
Identities = 27/48 (56%), Positives = 31/48 (64%)
Frame = -2 / -2
Query: 180 LTTAATEGLSCPG*PCETSIPKMMVGTCDTCGIDEDASTCSNEFRPPS 37
L TAA +G G PCETSIPK+MVGT DT G+ S +EF PPS
Sbjct: 157 LHTAAMDGTFDRGAPCETSIPKIMVGTLDTIGMAWFLSISKSEFNPPS 14
Score = 50.1 bits (103), Expect(2) = 3e-006
Identities = 22/42 (52%), Positives = 29/42 (69%)
Frame = -2 / -3
Query: 270 GLNNEDIISSLADWVCTDALYLEIRGH*RELTTAATEGLSCP 145
GLN E IIS+L D V T+ALYLE++G +ELTT + + P
Sbjct: 381 GLNRESIISTLGDRVHTEALYLEMQGQPKELTTLSVQKYKVP 256
Score = 41.4 bits (84), Expect(2) = 2e-004
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +1 / +2
Query: 37 AWWSELVAAS*SIFVNTTCVASTHHHLRYGCFTW 138
AWW E +* ++ CV ++H+L YGCF W
Sbjct: 14 AWWVEFTFGN*KKPGHSYCVEGSYHYLWYGCFAW 115
Score = 40.0 bits (81), Expect(3) = 1e-032
Identities = 15/22 (68%), Positives = 18/22 (81%)
Frame = +2 / +2
Query: 302 ESLIDFYTSSGKRKPEHIIIFR 367
E L DFY SSGK++PE +IIFR
Sbjct: 509 ELLFDFYLSSGKQRPEQVIIFR 574
Score = 38.6 bits (78), Expect(2) = 0.004
Identities = 20/49 (40%), Positives = 28/49 (57%)
Frame = +3 / +1
Query: 36 SLVV*TRCCKLKHLRQYHMCRKYPPSS*VWMFHMVIQDKIDLRLQRWLV 182
SLV * KLK R + +CR + P S VWMF MV ++ L R+++
Sbjct: 13 SLVG*IHFWKLKETRPFLLCRGFLPLSLVWMFRMVHHGRMYHPLLRYVM 159
Score = 33.1 bits (66), Expect(2) = 0.28
Identities = 17/46 (36%), Positives = 21/46 (45%)
Frame = -3 / -3
Query: 173 PLQPKVYLVLDDHVKHPYLR*WWVLATHVVLTKMLQLAATSSDHQA 36
P Q V+ + H KHPY R*W +T Q +S HQA
Sbjct: 150 PQQWMVHSTVVHHAKHPYQR*W*EPSTQ*EWPGFFQFPKVNSTHQA 13
Score = 28.6 bits (56), Expect(3) = 1e-012
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = -1 / -2
Query: 367 PENNYVFWFSLSRASVEV 314
PEN+ +FW L+RA VE+
Sbjct: 574 PENDDLFWSLLTRAKVEI 521
Score = 26.3 bits (51), Expect(2) = 2e-004
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +1 / +1
Query: 319 LH*LWKAKTRTHNYFQ 366
L *LW AKTRT ++FQ
Sbjct: 526 LP*LW*AKTRTSHHFQ 573
Score = 25.8 bits (50), Expect(3) = 1e-012
Identities = 17/42 (40%), Positives = 20/42 (47%)
Frame = -3 / -1
Query: 296 *GHHHQYPAA*TTRTSFLVWQIGCALMLYI*R*EAIDEN*PP 171
*GH ++P A*T W I C L I R +A N* P
Sbjct: 407 *GHGLRFPEA*TGNQ*SPPWVIECTRKLCIWRCKANPRN*QP 282
Score = 24.4 bits (47), Expect(2) = 0.004
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +3 / +3
Query: 318 STLALESENQNT*LFSGM 371
STLAL S++QN FSG+
Sbjct: 525 STLALVSKDQNKSSFSGL 578
Score = 24.0 bits (46), Expect(2) = 3e-006
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -2 / -3
Query: 369 SLKIIMCSGFRFPELV*K 316
+LK++ CSG PEL *K
Sbjct: 576 NLKMMTCSGLCLPELR*K 523
Score = 23.5 bits (45), Expect(2) = 0.28
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = -3 / -1
Query: 374 LHP*K*LCVLVFAFQS*CRSRSV 306
L *K* VLVFA+QS* R++ +
Sbjct: 581 LQT*K**LVLVFAYQS*GRNQII 513
>gb|BF587888.1|BF587888 FM1_34_C12.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 656
Score = 141 bits (302), Expect = 1e-032
Identities = 51/63 (80%), Positives = 59/63 (93%)
Frame = +2 / +1
Query: 527 DNVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFSADEMQEFVHSLS 706
+NV GTVVD+KVCHP+NFDFYMC+HAGMIGTTRPTHYH+LHDEIGF+ D++QE VHSLS
Sbjct: 1 ENVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFNPDDLQELVHSLS 180
Query: 707 YVY 715
YVY
Sbjct: 181 YVY 189
Score = 102 bits (218), Expect = 5e-021
Identities = 49/61 (80%), Positives = 51/61 (83%)
Frame = -2 / -1
Query: 714 YT*DSE*TNSCISSAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPGR 535
YT*+SE T+SC SS KPISSCR ** VGLVVPIIPAC HM*KSKFLG QTLLSTTVP
Sbjct: 188 YT*ESECTSSCRSSGLKPISSCRI***VGLVVPIIPACEHM*KSKFLG*QTLLSTTVPAG 9
Query: 534 T 532
T
Sbjct: 8 T 6
Score = 75.8 bits (159), Expect = 7e-013
Identities = 33/62 (53%), Positives = 44/62 (70%)
Frame = -1 / -3
Query: 715 VHVR*RMNKLLHLVCRETYLVVQNMIVGGPCCSNHPSMCTHVEVEVLRMANFTIHHSSRK 536
VHVR RM++LL ++ E YL++QNMI+ P +H SM THVEV+V M NF +H+SS
Sbjct: 189 VHVRERMHQLLQIIRIEAYLIMQNMIMSWPRSPDHSSMRTHVEVKVPWMTNFVVHNSSSW 10
Query: 535 NI 530
NI
Sbjct: 9 NI 4
Score = 65.7 bits (137), Expect = 7e-010
Identities = 33/61 (54%), Positives = 36/61 (59%)
Frame = +3 / +2
Query: 531 MFFLELWWIVKFAILRTSTSTCVHMLG*LEQQGPPTIMFCTTR*VSLQTRCRSLFIRYLT 710
MF LEL W KF I T TSTCV ML * +G I+FC R* S+ CRS IR LT
Sbjct: 5 MFQLELLWTTKFVIQGTLTSTCVRMLE*SGLRGQLIIIFCMMR*ASILMICRSWCIRSLT 184
Query: 711 C 713
C
Sbjct: 185 C 187
Score = 65.2 bits (136), Expect = 1e-009
Identities = 33/62 (53%), Positives = 40/62 (64%)
Frame = +1 / +3
Query: 529 QCSSWNCGG**SLPS*ELRLLHVCTCWDDWNNKAHPLSCSARRDRFLCRRDAGVCSFAIL 708
+CSSWNC G SL S EL LLHV CW+D + +A+ LS SA DR AG +FA+L
Sbjct: 3 KCSSWNCCGQQSLSSKEL*LLHVFACWNDRDYEANSLSYSA**DRLQS**SAGAGAFALL 182
Query: 709 RV 714
RV
Sbjct: 183 RV 188
Score = 62.9 bits (131), Expect = 5e-009
Identities = 31/61 (50%), Positives = 37/61 (60%)
Frame = -3 / -2
Query: 713 TRKIANEQTPASRLQRNLSRRAEHDSGWALLFQSSQHVHTCRSRSS*DGKLYYPPQFQEE 534
TRK AN PA +LS AE+D+ A +S QH +TCRS+SS D KL P QFQ E
Sbjct: 187 TRKRANAPAPADHQD*SLSHHAEYDNELAS*SRSFQHANTCRSQSSLDDKLCCPQQFQLE 8
Query: 533 H 531
H
Sbjct: 7 H 5
>gb|BG412421.1|BG412421 OV2_33_H08.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 677
Score = 141 bits (302), Expect = 1e-032
Identities = 51/63 (80%), Positives = 59/63 (93%)
Frame = +2 / +2
Query: 527 DNVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFSADEMQEFVHSLS 706
+NV GTVVD+KVCHP+NFDFYMC+HAGMIGTTRPTHYH+LHDEIGF+ D++QE VHSLS
Sbjct: 2 ENVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFNPDDLQELVHSLS 181
Query: 707 YVY 715
YVY
Sbjct: 182 YVY 190
Score = 101 bits (216), Expect = 9e-021
Identities = 49/63 (77%), Positives = 51/63 (80%)
Frame = -2 / -3
Query: 714 YT*DSE*TNSCISSAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPGR 535
YT*+SE T+SC SS KPISSC ** VGLVVPIIPAC HM*KSKFLG QTLLSTTVP
Sbjct: 189 YT*ESECTSSCRSSGLKPISSCSI***VGLVVPIIPACEHM*KSKFLG*QTLLSTTVPAG 10
Query: 534 TLS 526
T S
Sbjct: 9 TFS 1
Score = 71.6 bits (150), Expect = 1e-011
Identities = 32/62 (51%), Positives = 43/62 (69%)
Frame = -1 / -2
Query: 715 VHVR*RMNKLLHLVCRETYLVVQNMIVGGPCCSNHPSMCTHVEVEVLRMANFTIHHSSRK 536
VHVR RM++LL ++ E YL++Q MI+ P +H SM THVEV+V M NF +H+SS
Sbjct: 190 VHVRERMHQLLQIIRIEAYLIMQYMIMSWPRSPDHSSM*THVEVKVPWMTNFVVHNSSSW 11
Query: 535 NI 530
NI
Sbjct: 10 NI 5
Score = 68.4 bits (143), Expect = 1e-010
Identities = 34/63 (53%), Positives = 42/63 (66%)
Frame = +1 / +1
Query: 526 RQCSSWNCGG**SLPS*ELRLLHVCTCWDDWNNKAHPLSCSARRDRFLCRRDAGVCSFAI 705
R+CSSWNC G SL S EL LLHV TCW+D + +A+ LS +A DR AG +FA+
Sbjct: 1 RKCSSWNCCGQQSLSSKEL*LLHVFTCWNDRDYEANSLSYTA**DRLQS**SAGAGAFAL 180
Query: 706 LRV 714
LRV
Sbjct: 181 LRV 189
Score = 68.0 bits (142), Expect = 2e-010
Identities = 33/61 (54%), Positives = 37/61 (60%)
Frame = +3 / +3
Query: 531 MFFLELWWIVKFAILRTSTSTCVHMLG*LEQQGPPTIMFCTTR*VSLQTRCRSLFIRYLT 710
MF LEL W KF I T TSTCVHML * +G I++C R* S+ CRS IR LT
Sbjct: 6 MFQLELLWTTKFVIQGTLTSTCVHMLE*SGLRGQLIIIYCMMR*ASILMICRSWCIRSLT 185
Query: 711 C 713
C
Sbjct: 186 C 188
Score = 61.6 bits (128), Expect = 1e-008
Identities = 31/61 (50%), Positives = 37/61 (60%)
Frame = -3 / -1
Query: 713 TRKIANEQTPASRLQRNLSRRAEHDSGWALLFQSSQHVHTCRSRSS*DGKLYYPPQFQEE 534
TRK AN PA +LS A +D+ A +S QHV+TCRS+SS D KL P QFQ E
Sbjct: 188 TRKRANAPAPADHQD*SLSHHAVYDNELAS*SRSFQHVNTCRSQSSLDDKLCCPQQFQLE 9
Query: 533 H 531
H
Sbjct: 8 H 6
>gb|BG948185.1|BG948185 IP1_10_D07.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 597
Score = 141 bits (302), Expect = 1e-032
Identities = 51/63 (80%), Positives = 59/63 (93%)
Frame = +2 / +3
Query: 527 DNVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFSADEMQEFVHSLS 706
+NV GTVVD+KVCHP+NFDFYMC+HAGMIGTTRPTHYH+LHDEIGF+ D++QE VHSLS
Sbjct: 15 ENVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFNPDDLQELVHSLS 194
Query: 707 YVY 715
YVY
Sbjct: 195 YVY 203
Score = 101 bits (216), Expect = 9e-021
Identities = 49/63 (77%), Positives = 51/63 (80%)
Frame = -2 / -3
Query: 714 YT*DSE*TNSCISSAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPGR 535
YT*+SE T+SC SS KPISSC ** VGLVVPIIPAC HM*KSKFLG QTLLSTTVP
Sbjct: 202 YT*ESECTSSCRSSGLKPISSCSI***VGLVVPIIPACEHM*KSKFLG*QTLLSTTVPAG 23
Query: 534 TLS 526
T S
Sbjct: 22 TFS 14
Score = 71.6 bits (150), Expect = 1e-011
Identities = 32/62 (51%), Positives = 43/62 (69%)
Frame = -1 / -2
Query: 715 VHVR*RMNKLLHLVCRETYLVVQNMIVGGPCCSNHPSMCTHVEVEVLRMANFTIHHSSRK 536
VHVR RM++LL ++ E YL++Q MI+ P +H SM THVEV+V M NF +H+SS
Sbjct: 203 VHVRERMHQLLQIIRIEAYLIMQYMIMSWPRSPDHSSM*THVEVKVPWMTNFVVHNSSSW 24
Query: 535 NI 530
NI
Sbjct: 23 NI 18
Score = 69.8 bits (146), Expect = 4e-011
Identities = 34/63 (53%), Positives = 38/63 (60%)
Frame = +3 / +1
Query: 525 QTMFFLELWWIVKFAILRTSTSTCVHMLG*LEQQGPPTIMFCTTR*VSLQTRCRSLFIRY 704
Q MF LEL W KF I T TSTCVHML * +G I++C R* S+ CRS IR
Sbjct: 13 QKMFQLELLWTTKFVIQGTLTSTCVHMLE*SGLRGQLIIIYCMMR*ASILMICRSWCIRS 192
Query: 705 LTC 713
LTC
Sbjct: 193 LTC 201
Score = 68.4 bits (143), Expect = 1e-010
Identities = 34/63 (53%), Positives = 42/63 (66%)
Frame = +1 / +2
Query: 526 RQCSSWNCGG**SLPS*ELRLLHVCTCWDDWNNKAHPLSCSARRDRFLCRRDAGVCSFAI 705
R+CSSWNC G SL S EL LLHV TCW+D + +A+ LS +A DR AG +FA+
Sbjct: 14 RKCSSWNCCGQQSLSSKEL*LLHVFTCWNDRDYEANSLSYTA**DRLQS**SAGAGAFAL 193
Query: 706 LRV 714
LRV
Sbjct: 194 LRV 202
Score = 62.5 bits (130), Expect = 7e-009
Identities = 32/63 (50%), Positives = 38/63 (60%)
Frame = -3 / -1
Query: 713 TRKIANEQTPASRLQRNLSRRAEHDSGWALLFQSSQHVHTCRSRSS*DGKLYYPPQFQEE 534
TRK AN PA +LS A +D+ A +S QHV+TCRS+SS D KL P QFQ E
Sbjct: 201 TRKRANAPAPADHQD*SLSHHAVYDNELAS*SRSFQHVNTCRSQSSLDDKLCCPQQFQLE 22
Query: 533 HCL 525
H L
Sbjct: 21 HFL 13
>gb|CD228133.1|CD228133 CCC1_6_E11.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_6_E11_A007 3', mRNA sequence
Length = 638
Score = 138 bits (295), Expect = 1e-031
Identities = 52/52 (100%), Positives = 52/52 (100%)
Frame = +2 / +3
Query: 560 KVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFSADEMQEFVHSLSYVY 715
KVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFSADEMQEFVHSLSYVY
Sbjct: 3 KVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFSADEMQEFVHSLSYVY 158
Score = 120 bits (256), Expect = 3e-026
Identities = 51/52 (98%), Positives = 52/52 (100%)
Frame = -2 / -2
Query: 714 YT*DSE*TNSCISSAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTL 559
YT*+SE*TNSCISSAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTL
Sbjct: 157 YT*ESE*TNSCISSAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTL 2
Score = 114 bits (243), Expect = 2e-024
Identities = 44/52 (84%), Positives = 48/52 (92%)
Frame = -1 / -1
Query: 715 VHVR*RMNKLLHLVCRETYLVVQNMIVGGPCCSNHPSMCTHVEVEVLRMANF 560
+HVR RMNKLLH V RETYL+VQNMI+G PCCSNHPSMCTHVEV+VLRMANF
Sbjct: 158 IHVRERMNKLLHFVSRETYLIVQNMIMGRPCCSNHPSMCTHVEVKVLRMANF 3
Score = 112 bits (240), Expect = 5e-024
Identities = 46/52 (88%), Positives = 48/52 (92%)
Frame = +1 / +2
Query: 559 *SLPS*ELRLLHVCTCWDDWNNKAHPLSCSARRDRFLCRRDAGVCSFAILRV 714
*SLPS*EL LLHVCTCWDDWNNKA PLSCSAR DRFLC R+AGVCSFA+LRV
Sbjct: 2 *SLPS*EL*LLHVCTCWDDWNNKADPLSCSAR*DRFLC*RNAGVCSFALLRV 157
Score = 104 bits (222), Expect = 1e-021
Identities = 45/52 (86%), Positives = 47/52 (90%)
Frame = -3 / -3
Query: 713 TRKIANEQTPASRLQRNLSRRAEHDSGWALLFQSSQHVHTCRSRSS*DGKLY 558
TRK ANEQTPA R QRNLS RAEHD+G ALLFQSSQHVHTCRS+SS*DGKLY
Sbjct: 156 TRKRANEQTPAFRQQRNLSHRAEHDNGSALLFQSSQHVHTCRSQSS*DGKLY 1
Score = 102 bits (218), Expect = 5e-021
Identities = 44/52 (84%), Positives = 46/52 (88%)
Frame = +3 / +1
Query: 558 VKFAILRTSTSTCVHMLG*LEQQGPPTIMFCTTR*VSLQTRCRSLFIRYLTC 713
+KFAILRT TSTCVHMLG*LEQQG P IMFCT R*VSL T+CRSLFIR LTC
Sbjct: 1 IKFAILRTLTSTCVHMLG*LEQQGRPIIMFCTMR*VSLLTKCRSLFIRSLTC 156
>gb|BI074812.1|BI074812 IP1_16_G03.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 511
Score = 114 bits (243), Expect(2) = 5e-031
Identities = 47/60 (78%), Positives = 54/60 (90%)
Frame = +2 / +3
Query: 152 DRPSVAAVVSSRQWPLISRYRASVHTQSARLEMMSSLFKPRGTDDDGLIRESLIDFYTSS 331
D PS+AAVVSSR+WPLIS+YRASV TQS ++EM+ SLFKPR T+DDGLIRE LIDFYTSS
Sbjct: 330 DVPSIAAVVSSREWPLISKYRASVRTQSPKMEMIDSLFKPRETEDDGLIRECLIDFYTSS 509
Score = 95.0 bits (201), Expect(2) = 6e-029
Identities = 41/61 (67%), Positives = 47/61 (77%)
Frame = +2 / +3
Query: 2 YLLNLLMKINAKLGGLNSLLQVEASSSIPHVSQVPTIILGMDVSHGHPGQDRPSVAAVVS 181
YL N+L+KINAKLGG+NSLLQ+E S +IP VS+VPTIILGMDVSHG PG A V
Sbjct: 177 YLTNVLLKINAKLGGMNSLLQIETSPAIPQVSKVPTIILGMDVSHGSPGHSDVPSIAAVV 356
Query: 182 S 184
S
Sbjct: 357 S 359
Score = 74.8 bits (157), Expect(2) = 8e-029
Identities = 36/61 (59%), Positives = 38/61 (62%)
Frame = -2 / -1
Query: 333 PELV*KXXXXXXXXXXXXXXRGLNNEDIISSLADWVCTDALYLEIRGH*RELTTAATEGL 154
PELV*K RGLN E IIS L DWV T+ALY EIRGH RELTTAA +G
Sbjct: 511 PELV*KSIRHSRIRPSSSVSRGLNKESIISILGDWVRTEALYFEIRGHSRELTTAAMDGT 332
Query: 153 S 151
S
Sbjct: 331 S 329
Score = 73.5 bits (154), Expect(2) = 8e-029
Identities = 34/59 (57%), Positives = 36/59 (61%)
Frame = -2 / -1
Query: 177 TTAATEGLSCPG*PCETSIPKMMVGTCDTCGIDEDASTCSNEFRPPSFALIFISKLSRY 1
T A CPG P ETSIPK++VGT DT GI D S SNEF PPSFA IF RY
Sbjct: 352 TAAMDGTSECPGEPWETSIPKIIVGTLDT*GIAGDVSIWSNEFMPPSFAFIFSRTFVRY 176
Score = 65.7 bits (137), Expect(2) = 7e-014
Identities = 33/60 (55%), Positives = 37/60 (61%)
Frame = -1 / -3
Query: 331 RASVEVDQ*FPDEAIIISTPRLKQRGHHF*SGRLGVH*CSISRDKRPLTRTNHRCNRRSI 152
R VEV+Q PD+ II S P LKQR +HF LG SI RDKRP TRTN+ N R I
Sbjct: 509 RTGVEVNQTLPDQTIIFSFPWLKQRVNHFHLR*LGADRSSIFRDKRPFTRTNNSSNGRYI 330
Score = 58.8 bits (122), Expect(2) = 3e-009
Identities = 32/60 (53%), Positives = 36/60 (60%)
Frame = -3 / -2
Query: 332 QS*CRSRSVIPG*GHHHQYPAA*TTRTSFLVWQIGCALMLYI*R*EAIDEN*PPLQPKVY 153
Q+ CRS+S PG HH Q+P A*T SF IGC LYI R*EAI EN* Q V+
Sbjct: 510 QNWCRSQSDTPGSDHHLQFPVA*TKSQSFPS*VIGCGQKLYISR*EAIHEN*QQQQWTVH 331
Score = 53.8 bits (111), Expect(2) = 6e-029
Identities = 28/48 (58%), Positives = 30/48 (62%)
Frame = +1 / +2
Query: 190 MASYL*I*SISAHPICQTRNDVLVV*AAGY***WPHPGITDRLLH*LW 333
MASYL I*S HPI ND L V*A G * *W PG++D LLH W
Sbjct: 368 MASYLEI*SFCPHPIT*DGND*LFV*ATGN*R*WSDPGVSD*LLHQFW 511
Score = 47.3 bits (97), Expect(2) = 8e-008
Identities = 29/52 (55%), Positives = 31/52 (59%)
Frame = +3 / +1
Query: 177 LVLVNGLLSLDIEHQCTPNLPD*K*CPRCLSRGVLMMMASSGNH*STSTLAL 332
LVLVNGLLS +IE PN K* CLS G L MM SG+ * TST L
Sbjct: 355 LVLVNGLLSRNIELLSAPNHLRWK*LTLCLSHGKLKMMV*SGSV*LTSTPVL 510
Score = 41.4 bits (84), Expect(2) = 5e-031
Identities = 15/39 (38%), Positives = 25/39 (64%)
Frame = +1 / +2
Query: 22 EDQCKAWWSELVAAS*SIFVNTTCVASTHHHLRYGCFTW 138
+D+CKA W E VA +*+I N++ + +++L GC W
Sbjct: 197 KDKCKAGWHEFVAPN*NIPSNSSSIQGPNYNLGNGCLPW 313
Score = 32.2 bits (64), Expect(2) = 7e-014
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = -1 / -3
Query: 73 CFNLQQRVQTTKLCIDL 23
CFNL+QR+ T+LCI L
Sbjct: 248 CFNLEQRIHATQLCIYL 198
Score = 29.9 bits (59), Expect(2) = 8e-008
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = +3 / +1
Query: 21 *RSMQSLVV*TRCCKLKHLRQY 86
*R MQS V * RC KLKH +Q+
Sbjct: 196 *R*MQSWVA*IRCSKLKHPQQF 261
Score = 23.5 bits (45), Expect(2) = 3e-009
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = -3 / -2
Query: 83 LTKMLQLAATSSDHQALH 30
L M Q AT+S H ALH
Sbjct: 258 LLGMFQFGATNSCHPALH 205
>gb|CW194330.1|CW194330 104_617_11180039_148_36789_088 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11180039, DNA
sequence
Length = 712
Score = 94.5 bits (200), Expect(3) = 7e-031
Identities = 33/68 (48%), Positives = 50/68 (73%)
Frame = +2 / +1
Query: 512 QTASPDNVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFSADEMQEF 691
Q NV PGTVVD+ V P +DFY+C+H G++GT+RPTHY+ L DE GF +D++Q+
Sbjct: 271 QQTKTGNVPPGTVVDTGVVDPSAYDFYLCSHTGLLGTSRPTHYYSLVDEHGFGSDDLQKL 450
Query: 692 VHSLSYVY 715
+++L +V+
Sbjct: 451 IYNLCFVF 474
Score = 51.5 bits (106), Expect = 1e-005
Identities = 29/51 (56%), Positives = 31/51 (60%)
Frame = -2 / -3
Query: 684 CISSAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPGRT 532
C SS KP SS R ** VGL+VP P H *KS G T +STTVPG T
Sbjct: 443 CRSSDPKPCSSTRL**CVGLLVPRSPVWLHR*KSYADGSTTPVSTTVPGGT 291
Score = 46.0 bits (94), Expect(3) = 7e-031
Identities = 22/50 (44%), Positives = 29/50 (58%)
Frame = +2 / +1
Query: 290 GLIRESLIDFYTSSGKRKPEHIIIFRDGVSESQFTQVINIELDQIIEACK 439
G I LI + + KP+ II FRDGVS+ QF V+N EL + +A K
Sbjct: 37 GEICLELIGVFVKINRVKPQKIIYFRDGVSDGQFDMVLNEELADLEKAIK 186
Score = 36.8 bits (74), Expect = 0.36
Identities = 17/56 (30%), Positives = 32/56 (57%)
Frame = -1 / -2
Query: 697 MNKLLHLVCRETYLVVQNMIVGGPCCSNHPSMCTHVEVEVLRMANFTIHHSSRKNI 530
+++LL +V E LV Q ++V P P + VEV R+ + ++HH +R+++
Sbjct: 456 VDQLLQVVRPEAVLVHQAVVVCRPARP*KPGVAAQVEVVCRRVNHTSVHHRARRHV 289
Score = 32.7 bits (65), Expect(3) = 7e-031
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +2 / +1
Query: 455 WSPKFTVIVAQKNHHTKFF 511
++P TVIVA+K HHT+ F
Sbjct: 196 YAPTITVIVAKKRHHTRLF 252
>gb|AW564805.1|AW564805 LG1_301_F09.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 435
Score = 113 bits (241), Expect(2) = 4e-029
Identities = 42/75 (56%), Positives = 53/75 (70%)
Frame = +2 / +1
Query: 491 NHHTKFFQTASPDNVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFS 670
N+H N+LPGTVVDSK+CHP FDFY+C+HAG+ GT+RP HYHVL DE F+
Sbjct: 97 NNHNDQRTVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFT 276
Query: 671 ADEMQEFVHSLSYVY 715
ADE+Q ++L Y Y
Sbjct: 277 ADELQTLTNNLCYTY 321
Score = 54.2 bits (112), Expect = 2e-006
Identities = 28/49 (57%), Positives = 31/49 (63%)
Frame = -2 / -2
Query: 684 CISSAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPG 538
C SSA SS RT * G +VP +PA H *KS +GWQ L STTVPG
Sbjct: 290 CSSSAVNLFSSHRTW**AGRLVP*MPAWLHR*KSNSVGWQILESTTVPG 144
Score = 45.1 bits (92), Expect = 0.001
Identities = 18/52 (34%), Positives = 31/52 (59%)
Frame = -1 / -1
Query: 685 LHLVCRETYLVVQNMIVGGPCCSNHPSMCTHVEVEVLRMANFTIHHSSRKNI 530
L L+ + L+ Q+M++ CS + M T VE++ RMAN I+H +R+ +
Sbjct: 291 LQLISCKLVLIPQDMVMSRAACSLNAGMATQVEIKFRRMANLGINHGARQYV 136
Score = 35.9 bits (72), Expect(2) = 4e-029
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +2 / +1
Query: 431 ACKFLDEKWSPKFTVIVAQKNHHTKFF 511
AC L+ + P T +V QK HHT+ F
Sbjct: 13 ACASLEPNYQPPVTFVVVQKRHHTRLF 93
Score = 32.7 bits (65), Expect = 6.3
Identities = 18/42 (42%), Positives = 20/42 (47%)
Frame = +3 / +2
Query: 534 FFLELWWIVKFAILRTSTSTCVHMLG*LEQQGPPTIMFCTTR 659
+ L W I +FAILR STCV M EQ M C R
Sbjct: 140 YCLAPWLIPRFAILRNLISTCVAMPAFREQAALLITMSCGMR 265
>gb|AW564753.1|AW564753 LG1_301_D09.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 432
Score = 113 bits (241), Expect(2) = 4e-029
Identities = 42/75 (56%), Positives = 53/75 (70%)
Frame = +2 / +1
Query: 491 NHHTKFFQTASPDNVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFS 670
N+H N+LPGTVVDSK+CHP FDFY+C+HAG+ GT+RP HYHVL DE F+
Sbjct: 97 NNHNDQRTVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFT 276
Query: 671 ADEMQEFVHSLSYVY 715
ADE+Q ++L Y Y
Sbjct: 277 ADELQTLTNNLCYTY 321
Score = 54.2 bits (112), Expect = 2e-006
Identities = 28/49 (57%), Positives = 31/49 (63%)
Frame = -2 / -2
Query: 684 CISSAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPG 538
C SSA SS RT * G +VP +PA H *KS +GWQ L STTVPG
Sbjct: 290 CSSSAVNLFSSHRTW**AGRLVP*MPAWLHR*KSNSVGWQILESTTVPG 144
Score = 45.1 bits (92), Expect = 0.001
Identities = 18/52 (34%), Positives = 31/52 (59%)
Frame = -1 / -1
Query: 685 LHLVCRETYLVVQNMIVGGPCCSNHPSMCTHVEVEVLRMANFTIHHSSRKNI 530
L L+ + L+ Q+M++ CS + M T VE++ RMAN I+H +R+ +
Sbjct: 291 LQLISCKLVLIPQDMVMSRAACSLNAGMATQVEIKFRRMANLGINHGARQYV 136
Score = 35.9 bits (72), Expect(2) = 4e-029
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +2 / +1
Query: 431 ACKFLDEKWSPKFTVIVAQKNHHTKFF 511
AC L+ + P T +V QK HHT+ F
Sbjct: 13 ACASLEPNYQPPVTFVVVQKRHHTRLF 93
Score = 32.7 bits (65), Expect = 6.3
Identities = 18/42 (42%), Positives = 20/42 (47%)
Frame = +3 / +2
Query: 534 FFLELWWIVKFAILRTSTSTCVHMLG*LEQQGPPTIMFCTTR 659
+ L W I +FAILR STCV M EQ M C R
Sbjct: 140 YCLAPWLIPRFAILRNLISTCVAMPAFREQAALLITMSCGMR 265
>gb|BI245776.1|BI245776 IP1_64_C06.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 676
Score = 128 bits (275), Expect = 7e-029
Identities = 45/54 (83%), Positives = 52/54 (96%)
Frame = +2 / +1
Query: 554 DSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFSADEMQEFVHSLSYVY 715
D+KVCHP+NFDFYMC+HAGMIGTTRPTHYH+LHDEIGF+ D++QE VHSLSYVY
Sbjct: 1 DNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFNPDDLQELVHSLSYVY 162
Score = 87.2 bits (184), Expect = 2e-016
Identities = 42/53 (79%), Positives = 44/53 (83%)
Frame = -2 / -3
Query: 714 YT*DSE*TNSCISSAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLL 556
YT*+SE T+SC SS KPISSC ** VGLVVPIIPAC HM*KSKFLG QTLL
Sbjct: 161 YT*ESECTSSCRSSGLKPISSCSI***VGLVVPIIPACEHM*KSKFLG*QTLL 3
Score = 61.1 bits (127), Expect = 2e-008
Identities = 27/54 (50%), Positives = 37/54 (68%)
Frame = -1 / -2
Query: 715 VHVR*RMNKLLHLVCRETYLVVQNMIVGGPCCSNHPSMCTHVEVEVLRMANFTI 554
VHVR RM++LL ++ E YL++Q MI+ P +H SM THVEV+V M NF +
Sbjct: 162 VHVRERMHQLLQIIRIEAYLIMQYMIMSWPRSPDHSSM*THVEVKVPWMTNFVV 1
Score = 54.7 bits (113), Expect = 2e-006
Identities = 27/51 (52%), Positives = 31/51 (60%)
Frame = +3 / +2
Query: 561 KFAILRTSTSTCVHMLG*LEQQGPPTIMFCTTR*VSLQTRCRSLFIRYLTC 713
KF I T TSTCVHML * +G I++C R* S+ CRS IR LTC
Sbjct: 8 KFVIQGTLTSTCVHMLE*SGLRGQLIIIYCMMR*ASILMICRSWCIRSLTC 160
Score = 48.7 bits (100), Expect = 9e-005
Identities = 25/51 (49%), Positives = 31/51 (60%)
Frame = -3 / -1
Query: 713 TRKIANEQTPASRLQRNLSRRAEHDSGWALLFQSSQHVHTCRSRSS*DGKL 561
TRK AN PA +LS A +D+ A +S QHV+TCRS+SS D KL
Sbjct: 160 TRKRANAPAPADHQD*SLSHHAVYDNELAS*SRSFQHVNTCRSQSSLDDKL 8
Score = 48.3 bits (99), Expect = 1e-004
Identities = 26/51 (50%), Positives = 33/51 (64%)
Frame = +1 / +3
Query: 562 SLPS*ELRLLHVCTCWDDWNNKAHPLSCSARRDRFLCRRDAGVCSFAILRV 714
SL S EL LLHV TCW+D + +A+ LS +A DR AG +FA+LRV
Sbjct: 9 SLSSKEL*LLHVFTCWNDRDYEANSLSYTA**DRLQS**SAGAGAFALLRV 161
>gb|BG605739.1|BG605739 RHIZ2_80_H09.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 646
Score = 126 bits (269), Expect = 5e-028
Identities = 44/53 (83%), Positives = 51/53 (96%)
Frame = +2 / +1
Query: 557 SKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFSADEMQEFVHSLSYVY 715
+KVCHP+NFDFYMC+HAGMIGTTRPTHYH+LHDEIGF+ D++QE VHSLSYVY
Sbjct: 1 NKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFNPDDLQELVHSLSYVY 159
Score = 85.4 bits (180), Expect = 9e-016
Identities = 41/52 (78%), Positives = 43/52 (82%)
Frame = -2 / -3
Query: 714 YT*DSE*TNSCISSAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTL 559
YT*+SE T+SC SS KPISSC ** VGLVVPIIPAC HM*KSKFLG QTL
Sbjct: 158 YT*ESECTSSCRSSGLKPISSCSI***VGLVVPIIPACEHM*KSKFLG*QTL 3
Score = 59.7 bits (124), Expect = 5e-008
Identities = 27/52 (51%), Positives = 36/52 (69%)
Frame = -1 / -2
Query: 715 VHVR*RMNKLLHLVCRETYLVVQNMIVGGPCCSNHPSMCTHVEVEVLRMANF 560
VHVR RM++LL ++ E YL++Q MI+ P +H SM THVEV+V M NF
Sbjct: 159 VHVRERMHQLLQIIRIEAYLIMQYMIMSWPRSPDHSSM*THVEVKVPWMTNF 4
Score = 54.7 bits (113), Expect = 2e-006
Identities = 27/51 (52%), Positives = 31/51 (60%)
Frame = +3 / +2
Query: 561 KFAILRTSTSTCVHMLG*LEQQGPPTIMFCTTR*VSLQTRCRSLFIRYLTC 713
KF I T TSTCVHML * +G I++C R* S+ CRS IR LTC
Sbjct: 5 KFVIQGTLTSTCVHMLE*SGLRGQLIIIYCMMR*ASILMICRSWCIRSLTC 157
Score = 48.7 bits (100), Expect = 9e-005
Identities = 25/51 (49%), Positives = 31/51 (60%)
Frame = -3 / -1
Query: 713 TRKIANEQTPASRLQRNLSRRAEHDSGWALLFQSSQHVHTCRSRSS*DGKL 561
TRK AN PA +LS A +D+ A +S QHV+TCRS+SS D KL
Sbjct: 157 TRKRANAPAPADHQD*SLSHHAVYDNELAS*SRSFQHVNTCRSQSSLDDKL 5
Score = 48.3 bits (99), Expect = 1e-004
Identities = 26/51 (50%), Positives = 33/51 (64%)
Frame = +1 / +3
Query: 562 SLPS*ELRLLHVCTCWDDWNNKAHPLSCSARRDRFLCRRDAGVCSFAILRV 714
SL S EL LLHV TCW+D + +A+ LS +A DR AG +FA+LRV
Sbjct: 6 SLSSKEL*LLHVFTCWNDRDYEANSLSYTA**DRLQS**SAGAGAFALLRV 158
>gb|CW066457.1|CW066457 104_313_10523697_114_30148 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10523697, DNA
sequence
Length = 696
Score = 51.0 bits (105), Expect(4) = 9e-028
Identities = 18/27 (66%), Positives = 22/27 (81%)
Frame = +2 / +1
Query: 449 EKWSPKFTVIVAQKNHHTKFFQTASPD 529
+ W PKFTVIVAQKNHHT+FF+ + D
Sbjct: 421 DTWLPKFTVIVAQKNHHTRFFRDGNND 501
Score = 49.6 bits (102), Expect(4) = 9e-028
Identities = 17/25 (68%), Positives = 21/25 (84%)
Frame = +2 / +3
Query: 542 GTVVDSKVCHPKNFDFYMCAHAGMI 616
GTVVD+ +C P+ +DFYMCAHAG I
Sbjct: 594 GTVVDTGICPPRYYDFYMCAHAGRI 668
Score = 41.8 bits (85), Expect(4) = 9e-028
Identities = 18/27 (66%), Positives = 20/27 (74%)
Frame = +2 / +2
Query: 362 FRDGVSESQFTQVINIELDQIIEACKF 442
FRDGVSE +F V+NIEL QIIE F
Sbjct: 242 FRDGVSEGEFKHVLNIELAQIIEVETF 322
Score = 40.9 bits (83), Expect(4) = 2e-016
Identities = 19/34 (55%), Positives = 24/34 (70%)
Frame = -2 / -3
Query: 615 IIPACAHM*KSKFLGWQTLLSTTVPGRTLSGDAV 514
I+PA AHM*KS +LG Q +STTVP R L + +
Sbjct: 667 ILPA*AHM*KS*YLGGQIPVSTTVPARGLQDEDI 566
Score = 40.0 bits (81), Expect(4) = 9e-028
Identities = 15/22 (68%), Positives = 18/22 (81%)
Frame = +2 / +3
Query: 302 ESLIDFYTSSGKRKPEHIIIFR 367
E L DFY SSGK++PE +IIFR
Sbjct: 54 ELLFDFYLSSGKQRPEQVIIFR 119
Score = 37.3 bits (75), Expect(4) = 2e-016
Identities = 16/21 (76%), Positives = 16/21 (76%)
Frame = -2 / -2
Query: 510 KNLVWWFF*ATITVNLGDHFS 448
KNLV WFF ATITVNLG S
Sbjct: 482 KNLV*WFFCATITVNLGSQVS 420
Score = 33.6 bits (67), Expect(4) = 2e-016
Identities = 14/23 (60%), Positives = 18/23 (78%)
Frame = -1 / -3
Query: 430 LDDLIQLNVDDLGKLTFTDSIPE 362
L+DL QLNV ++ KL T+SIPE
Sbjct: 310 LNDLCQLNVQNMLKLALTNSIPE 242
Score = 33.1 bits (66), Expect(3) = 2e-006
Identities = 10/15 (66%), Positives = 13/15 (86%)
Frame = +1 / +3
Query: 463 QVHCDCCSKEPPHQV 507
QVH DCC++EP H+V
Sbjct: 435 QVHSDCCAEEPSHKV 479
Score = 32.7 bits (65), Expect(4) = 8e-007
Identities = 16/33 (48%), Positives = 21/33 (63%)
Frame = -2 / -1
Query: 459 DHFSSRNLHASMI*SSSMLMTWVN*LSLTPSLK 361
+ + N+ SMI +SSM T +N SLTPSLK
Sbjct: 339 EQITGGNVSTSMICASSMFRTCLNSPSLTPSLK 241
Score = 29.9 bits (59), Expect(3) = 0.001
Identities = 15/25 (60%), Positives = 18/25 (72%)
Frame = -3 / -2
Query: 437 YMPR*SDPAQC**PG*TDFH*LHP* 363
++P+*S PAQC *T H*LHP*
Sbjct: 317 FLPQ*SVPAQCSEHA*TRPH*LHP* 243
Score = 29.9 bits (59), Expect(3) = 2e-006
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = +1 / +1
Query: 361 FQGWSQ*KSVYPGHQH*AGSDHRG 432
FQGWS * V +H*AG+DH G
Sbjct: 241 FQGWS**GRV*ACSEH*AGTDH*G 312
Score = 29.0 bits (57), Expect(2) = 0.63
Identities = 14/23 (60%), Positives = 15/23 (65%)
Frame = +3 / +3
Query: 363 SGMESVKVSLPRSSTLSWIRSSR 431
SGME V+ SL TLSW RS R
Sbjct: 243 SGMELVRASLSMF*TLSWHRSLR 311
Score = 28.6 bits (56), Expect(4) = 2e-016
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = -1 / -2
Query: 367 PENNYVFWFSLSRASVEV 314
PEN+ +FW L+RA VE+
Sbjct: 119 PENDDLFWSLLTRAKVEI 66
Score = 27.2 bits (53), Expect(4) = 8e-007
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = -1 / -1
Query: 499 VVVLLSNNHSELG*P 455
V+VLL NNH ELG P
Sbjct: 471 VMVLLRNNHCELGEP 427
Score = 26.3 bits (51), Expect(3) = 2e-006
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +1 / +2
Query: 319 LH*LWKAKTRTHNYFQ 366
L *LW AKTRT ++FQ
Sbjct: 71 LP*LW*AKTRTSHHFQ 118
Score = 25.4 bits (49), Expect(3) = 0.001
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = -3 / -3
Query: 509 RTWCGGSFEQQSQ*TW 462
+T C GS QQS *TW
Sbjct: 481 KTLCDGSSAQQSL*TW 434
Score = 24.4 bits (47), Expect(2) = 0.63
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +3 / +1
Query: 318 STLALESENQNT*LFSGM 371
STLAL S++QN FSG+
Sbjct: 70 STLALVSKDQNKSSFSGL 123
Score = 24.0 bits (46), Expect(4) = 8e-007
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -2 / -3
Query: 369 SLKIIMCSGFRFPELV*K 316
+LK++ CSG PEL *K
Sbjct: 121 NLKMMTCSGLCLPELR*K 68
Score = 23.5 bits (45), Expect(3) = 0.001
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = -3 / -1
Query: 374 LHP*K*LCVLVFAFQS*CRSRSV 306
L *K* VLVFA+QS* R++ +
Sbjct: 126 LQT*K**LVLVFAYQS*GRNQII 58
Score = 22.6 bits (43), Expect(4) = 8e-007
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = -1 / -2
Query: 616 NHPSMCTHVEVEVLRMANFTIHHSS 542
N + THVE+ V A+ +H+S+
Sbjct: 668 NPAGVSTHVEIIVSGWADSRVHNST 594
>gb|CW288849.1|CW288849 104_767_11412169_148_35539_007 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11412169, DNA
sequence
Length = 630
Score = 53.8 bits (111), Expect(4) = 1e-027
Identities = 23/34 (67%), Positives = 28/34 (82%)
Frame = +2 / -3
Query: 200 ISRYRASVHTQSARLEMMSSLFKPRGTDDDGLIR 301
ISRYRASV T S R+E++ SLFKP+G +D GLIR
Sbjct: 625 ISRYRASVCTLSPRVEIIDSLFKPQGNEDRGLIR 524
Score = 46.0 bits (94), Expect(4) = 1e-027
Identities = 16/20 (80%), Positives = 18/20 (90%)
Frame = +2 / -1
Query: 449 EKWSPKFTVIVAQKNHHTKF 508
+ W PKFTVIVAQKNHHT+F
Sbjct: 60 DTWLPKFTVIVAQKNHHTRF 1
Score = 41.8 bits (85), Expect(4) = 1e-027
Identities = 18/27 (66%), Positives = 20/27 (74%)
Frame = +2 / -2
Query: 362 FRDGVSESQFTQVINIELDQIIEACKF 442
FRDGVSE +F V+NIEL QIIE F
Sbjct: 239 FRDGVSEGEFKHVLNIELAQIIEVETF 159
Score = 40.0 bits (81), Expect(4) = 1e-027
Identities = 15/22 (68%), Positives = 18/22 (81%)
Frame = +2 / -3
Query: 302 ESLIDFYTSSGKRKPEHIIIFR 367
E L DFY SSGK++PE +IIFR
Sbjct: 427 ELLFDFYLSSGKQRPEQVIIFR 362
Score = 37.3 bits (75), Expect(4) = 5e-014
Identities = 16/25 (64%), Positives = 20/25 (80%)
Frame = -2 / +3
Query: 270 GLNNEDIISSLADWVCTDALYLEIR 196
GLN E IIS+L D V T+ALYLE++
Sbjct: 555 GLNRESIISTLGDRVHTEALYLEMQ 629
Score = 35.0 bits (70), Expect(4) = 5e-014
Identities = 15/20 (75%), Positives = 15/20 (75%)
Frame = -2 / +2
Query: 507 NLVWWFF*ATITVNLGDHFS 448
NLV WFF ATITVNLG S
Sbjct: 2 NLV*WFFCATITVNLGSQVS 61
Score = 33.6 bits (67), Expect(4) = 5e-014
Identities = 14/23 (60%), Positives = 18/23 (78%)
Frame = -1 / +3
Query: 430 LDDLIQLNVDDLGKLTFTDSIPE 362
L+DL QLNV ++ KL T+SIPE
Sbjct: 171 LNDLCQLNVQNMLKLALTNSIPE 239
Score = 33.1 bits (66), Expect(3) = 2e-006
Identities = 10/15 (66%), Positives = 13/15 (86%)
Frame = +1 / -3
Query: 463 QVHCDCCSKEPPHQV 507
QVH DCC++EP H+V
Sbjct: 46 QVHSDCCAEEPSHKV 2
Score = 32.7 bits (65), Expect(3) = 6e-005
Identities = 16/33 (48%), Positives = 21/33 (63%)
Frame = -2 / +1
Query: 459 DHFSSRNLHASMI*SSSMLMTWVN*LSLTPSLK 361
+ + N+ SMI +SSM T +N SLTPSLK
Sbjct: 142 EQITGGNVSTSMICASSMFRTCLNSPSLTPSLK 240
Score = 29.9 bits (59), Expect(3) = 2e-006
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = +1 / -1
Query: 361 FQGWSQ*KSVYPGHQH*AGSDHRG 432
FQGWS * V +H*AG+DH G
Sbjct: 240 FQGWS**GRV*ACSEH*AGTDH*G 169
Score = 29.9 bits (59), Expect(3) = 0.003
Identities = 15/25 (60%), Positives = 18/25 (72%)
Frame = -3 / +2
Query: 437 YMPR*SDPAQC**PG*TDFH*LHP* 363
++P+*S PAQC *T H*LHP*
Sbjct: 164 FLPQ*SVPAQCSEHA*TRPH*LHP* 238
Score = 29.0 bits (57), Expect(2) = 0.64
Identities = 14/23 (60%), Positives = 15/23 (65%)
Frame = +3 / -3
Query: 363 SGMESVKVSLPRSSTLSWIRSSR 431
SGME V+ SL TLSW RS R
Sbjct: 238 SGMELVRASLSMF*TLSWHRSLR 170
Score = 28.6 bits (56), Expect(4) = 5e-014
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = -1 / +2
Query: 367 PENNYVFWFSLSRASVEV 314
PEN+ +FW L+RA VE+
Sbjct: 362 PENDDLFWSLLTRAKVEI 415
Score = 27.2 bits (53), Expect(3) = 6e-005
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = -1 / +1
Query: 499 VVVLLSNNHSELG*P 455
V+VLL NNH ELG P
Sbjct: 10 VMVLLRNNHCELGEP 54
Score = 26.3 bits (51), Expect(3) = 2e-006
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +1 / -2
Query: 319 LH*LWKAKTRTHNYFQ 366
L *LW AKTRT ++FQ
Sbjct: 410 LP*LW*AKTRTSHHFQ 363
Score = 24.4 bits (47), Expect(2) = 0.64
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +3 / -1
Query: 318 STLALESENQNT*LFSGM 371
STLAL S++QN FSG+
Sbjct: 411 STLALVSKDQNKSSFSGL 358
Score = 24.4 bits (47), Expect(3) = 0.003
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -3 / +3
Query: 506 TWCGGSFEQQSQ*TW 462
T C GS QQS *TW
Sbjct: 3 TLCDGSSAQQSL*TW 47
Score = 24.0 bits (46), Expect(3) = 6e-005
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -2 / +3
Query: 369 SLKIIMCSGFRFPELV*K 316
+LK++ CSG PEL *K
Sbjct: 360 NLKMMTCSGLCLPELR*K 413
Score = 23.5 bits (45), Expect(3) = 0.003
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = -3 / +1
Query: 374 LHP*K*LCVLVFAFQS*CRSRSV 306
L *K* VLVFA+QS* R++ +
Sbjct: 355 LQT*K**LVLVFAYQS*GRNQII 423
>gb|BG103497.1|BG103497 RHIZ2_37_C08.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 635
Score = 123 bits (263), Expect = 3e-027
Identities = 43/51 (84%), Positives = 49/51 (96%)
Frame = +2 / +1
Query: 563 VCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFSADEMQEFVHSLSYVY 715
VCHP+NFDFYMC+HAGMIGTTRPTHYH+LHDEIGF+ D++QE VHSLSYVY
Sbjct: 1 VCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFNPDDLQELVHSLSYVY 153
Score = 83.5 bits (176), Expect = 3e-015
Identities = 39/48 (81%), Positives = 41/48 (85%)
Frame = -2 / -1
Query: 714 YT*DSE*TNSCISSAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLG 571
YT*+SE T+SC SS KPISSCR ** VGLVVPIIPAC HM*KSKFLG
Sbjct: 152 YT*ESECTSSCRSSGLKPISSCRI***VGLVVPIIPACEHM*KSKFLG 9
Score = 58.8 bits (122), Expect = 9e-008
Identities = 25/46 (54%), Positives = 34/46 (73%)
Frame = -1 / -3
Query: 715 VHVR*RMNKLLHLVCRETYLVVQNMIVGGPCCSNHPSMCTHVEVEV 578
VHVR RM++LL ++ E YL++QNMI+ P +H SM THVEV+V
Sbjct: 153 VHVRERMHQLLQIIRIEAYLIMQNMIMSWPRSPDHSSMRTHVEVKV 16
Score = 47.3 bits (97), Expect = 2e-004
Identities = 25/48 (52%), Positives = 28/48 (58%)
Frame = +3 / +2
Query: 570 ILRTSTSTCVHMLG*LEQQGPPTIMFCTTR*VSLQTRCRSLFIRYLTC 713
I T TSTCV ML * +G I+FC R* S+ CRS IR LTC
Sbjct: 8 IQGTLTSTCVRMLE*SGLRGQLIIIFCMMR*ASILMICRSWCIRSLTC 151
Score = 46.4 bits (95), Expect = 5e-004
Identities = 23/48 (47%), Positives = 29/48 (60%)
Frame = -3 / -2
Query: 713 TRKIANEQTPASRLQRNLSRRAEHDSGWALLFQSSQHVHTCRSRSS*D 570
TRK AN PA +LS AE+D+ A +S QH +TCRS+SS D
Sbjct: 151 TRKRANAPAPADHQD*SLSHHAEYDNELAS*SRSFQHANTCRSQSSLD 8
Score = 44.1 bits (90), Expect = 0.002
Identities = 24/48 (50%), Positives = 30/48 (62%)
Frame = +1 / +3
Query: 571 S*ELRLLHVCTCWDDWNNKAHPLSCSARRDRFLCRRDAGVCSFAILRV 714
S EL LLHV CW+D + +A+ LS SA DR AG +FA+LRV
Sbjct: 9 SKEL*LLHVFACWNDRDYEANSLSYSA**DRLQS**SAGAGAFALLRV 152
>gb|CW030108.1|CW030108 104_258_10500065_114_30403 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10500065, DNA
sequence
Length = 840
Score = 52.4 bits (108), Expect(5) = 1e-026
Identities = 16/24 (66%), Positives = 21/24 (87%)
Frame = +2 / -1
Query: 542 GTVVDSKVCHPKNFDFYMCAHAGM 613
GTVVD ++CHP FDFY+C+HAG+
Sbjct: 255 GTVVDQQICHPTEFDFYLCSHAGI 184
Score = 50.1 bits (103), Expect(5) = 1e-026
Identities = 18/31 (58%), Positives = 24/31 (77%)
Frame = +2 / -2
Query: 617 GTTRPTHYHVLHDEIGFSADEMQEFVHSLSY 709
GT+RPTHYHVL+DE F+AD +Q ++L Y
Sbjct: 101 GTSRPTHYHVLYDENHFTADALQSLTNNLCY 9
Score = 38.2 bits (77), Expect(5) = 1e-026
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +2 / -1
Query: 422 IIEACKFLDEKWSPKFTVIVAQKNHHTKFF 511
+ +AC L+E + P T +V QK HHT+ F
Sbjct: 495 LFKACASLEEGYLPPVTFVVVQKRHHTRLF 406
Score = 34.5 bits (69), Expect(3) = 8e-006
Identities = 15/24 (62%), Positives = 16/24 (66%)
Frame = -2 / +2
Query: 612 IPACAHM*KSKFLGWQTLLSTTVP 541
IPA H *KS +GWQ STTVP
Sbjct: 185 IPA*LHK*KSNSVGWQICWSTTVP 256
Score = 32.2 bits (64), Expect = 8.7
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = -1 / +1
Query: 607 SMCTHVEVEVLRMANFTIHHSS 542
SM T VE+++ RMAN ++HSS
Sbjct: 190 SMTTQVEIKLSRMANLLVNHSS 255
Score = 31.8 bits (63), Expect(5) = 1e-026
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +2 / -1
Query: 359 IFRDGVSESQFTQVINIELDQI 424
++RDGVSE QF+ V+ E+D I
Sbjct: 648 LYRDGVSEGQFSHVLLHEMDAI 583
Score = 29.5 bits (58), Expect(2) = 2.1
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = +3 / -2
Query: 543 ELWWIVKFAILRTSTSTCVHML 608
ELW +FAIL + STCV ML
Sbjct: 254 ELWLTNRFAILLSLISTCVVML 189
Score = 28.6 bits (56), Expect(3) = 8e-006
Identities = 8/23 (34%), Positives = 16/23 (69%)
Frame = -1 / +3
Query: 685 LHLVCRETYLVVQNMIVGGPCCS 617
L + + L++++M++GGP CS
Sbjct: 33 LQCISSKMILIIEDMVMGGPTCS 101
Score = 27.2 bits (53), Expect(3) = 8e-006
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -2 / +2
Query: 435 HASMI*SSSMLMTWVN*LSLTPSL 364
H ++ S S TW+N* SLTPSL
Sbjct: 572 HTFLMASIS*RSTWLN*PSLTPSL 643
Score = 23.5 bits (45), Expect(5) = 1e-026
Identities = 9/26 (34%), Positives = 14/26 (53%)
Frame = +2 / -1
Query: 290 GLIRESLIDFYTSSGKRKPEHIIIFR 367
GL+ L+ + R+PE II +R
Sbjct: 801 GLVCRELLIAFRRKTNRRPERIIFYR 724
Score = 22.1 bits (42), Expect(2) = 2.1
Identities = 8/18 (44%), Positives = 9/18 (50%)
Frame = +1 / -1
Query: 619 NNKAHPLSCSARRDRFLC 672
N AHPL C + F C
Sbjct: 99 NKSAHPLPCPL**ESFYC 46
>gb|CW140518.1|CW140518 104_531_11135826_116_34925_077 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11135826, DNA
sequence
Length = 663
Score = 68.0 bits (142), Expect(3) = 2e-026
Identities = 25/33 (75%), Positives = 27/33 (81%)
Frame = +2 / -1
Query: 617 GTTRPTHYHVLHDEIGFSADEMQEFVHSLSYVY 715
GTTRP HY VLHDEIGFS D +QE +H LSYVY
Sbjct: 258 GTTRPAHYQVLHDEIGFSPDALQELIHCLSYVY 160
Score = 54.2 bits (112), Expect(3) = 2e-026
Identities = 18/25 (72%), Positives = 22/25 (88%)
Frame = +2 / -2
Query: 542 GTVVDSKVCHPKNFDFYMCAHAGMI 616
GTVVD+ +CHP+ +DFYMCAHAG I
Sbjct: 503 GTVVDTGICHPRYYDFYMCAHAGRI 429
Score = 45.1 bits (92), Expect(3) = 2e-013
Identities = 19/34 (55%), Positives = 25/34 (73%)
Frame = -2 / +1
Query: 615 IIPACAHM*KSKFLGWQTLLSTTVPGRTLSGDAV 514
I+PA AHM*KS +LGWQ +STTVP + L + +
Sbjct: 430 ILPA*AHM*KS*YLGWQIPVSTTVPAQGLQDEDI 531
Score = 43.7 bits (89), Expect(3) = 2e-013
Identities = 20/33 (60%), Positives = 24/33 (72%)
Frame = -2 / +2
Query: 714 YT*DSE*TNSCISSAEKPISSCRT**WVGLVVP 616
YT*+ + +SC +S EKPISSC T * GLVVP
Sbjct: 161 YT*ERQWMSSCRASGEKPISSCSTW*CAGLVVP 259
Score = 38.2 bits (77), Expect(3) = 2e-026
Identities = 14/20 (70%), Positives = 16/20 (80%)
Frame = +2 / -1
Query: 461 PKFTVIVAQKNHHTKFFQTA 520
PKFTV+ AQKNHHT F + A
Sbjct: 663 PKFTVMFAQKNHHTSFSEMA 604
Score = 33.6 bits (67), Expect(3) = 7e-004
Identities = 11/32 (34%), Positives = 22/32 (68%)
Frame = -1 / +1
Query: 715 VHVR*RMNKLLHLVCRETYLVVQNMIVGGPCC 620
+H+ +++LL + RE L+VQ++++ PCC
Sbjct: 160 IHIGEAVDELLQSIGREADLIVQHLVMRWPCC 255
Score = 31.3 bits (62), Expect(2) = 1.2
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +1 / -3
Query: 463 QVHCDCCSKEPPHQVLSDG 519
QVH D C++EP H+ DG
Sbjct: 661 QVHSDVCAEEPSHKFFRDG 605
Score = 27.6 bits (54), Expect(3) = 2e-013
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = -2 / +2
Query: 519 AV*KNLVWWFF*ATITVNL 463
A+ + LV WFF A ITVNL
Sbjct: 605 AISEKLV*WFFCANITVNL 661
Score = 25.4 bits (49), Expect(3) = 7e-004
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = -3 / +3
Query: 524 VMPSERTWCGGSFEQQSQ*TW 462
++PS + C GS Q S *TW
Sbjct: 600 LLPSLKNLCDGSSAQTSL*TW 662
Score = 23.5 bits (45), Expect(3) = 7e-004
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = -1 / +3
Query: 616 NHPSMCTHVEVEVLRMANFTIHHSS 542
N + THVE+ V +A+ +H+S+
Sbjct: 429 NPAGVSTHVEIIVSGVADSRVHNST 503
Score = 23.1 bits (44), Expect(2) = 1.2
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +3 / -2
Query: 621 QQGPPTIMFCTTR*VSLQTRCRS 689
QQG CT R SL CRS
Sbjct: 254 QQGQRITKCCTMRSASLPMLCRS 186
>gb|CW061656.1|CW061656 104_305_10520518_114_30152 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10520518, DNA
sequence
Length = 657
Score = 74.8 bits (157), Expect(2) = 2e-026
Identities = 31/47 (65%), Positives = 39/47 (82%)
Frame = +2 / -3
Query: 35 KLGGLNSLLQVEASSSIPHVSQVPTIILGMDVSHGHPGQDRPSVAAV 175
+LGGLNSLL++E + +IP VS+VPTII GMDVSHG P + PS+AAV
Sbjct: 469 QLGGLNSLLEIERNQAIPIVSRVPTIIFGMDVSHGAPRSNVPSIAAV 329
Score = 67.0 bits (140), Expect(2) = 2e-026
Identities = 29/43 (67%), Positives = 34/43 (79%)
Frame = +2 / -2
Query: 173 VVSSRQWPLISRYRASVHTQSARLEMMSSLFKPRGTDDDGLIR 301
VVSS WP ISRYRASV T S R+E++ SLFKP+G +D GLIR
Sbjct: 197 VVSSLGWPCISRYRASVCTLSPRVEIIDSLFKPQGNEDRGLIR 69
Score = 58.8 bits (122), Expect(2) = 2e-009
Identities = 27/48 (56%), Positives = 31/48 (64%)
Frame = -2 / +3
Query: 180 LTTAATEGLSCPG*PCETSIPKMMVGTCDTCGIDEDASTCSNEFRPPS 37
L TAA +G G PCETSIPK+MVGT DT G+ S +EF PPS
Sbjct: 324 LHTAAMDGTFDRGAPCETSIPKIMVGTLDTIGMAWFLSISKSEFNPPS 467
Score = 50.1 bits (103), Expect = 4e-005
Identities = 22/42 (52%), Positives = 29/42 (69%)
Frame = -2 / +1
Query: 270 GLNNEDIISSLADWVCTDALYLEIRGH*RELTTAATEGLSCP 145
GLN E IIS+L D V T+ALYLE++G +ELTT + + P
Sbjct: 100 GLNRESIISTLGDRVHTEALYLEMQGQPKELTTLSVQKYKVP 225
Score = 41.4 bits (84), Expect = 0.015
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +1 / -2
Query: 37 AWWSELVAAS*SIFVNTTCVASTHHHLRYGCFTW 138
AWW E +* ++ CV ++H+L YGCF W
Sbjct: 467 AWWVEFTFGN*KKPGHSYCVEGSYHYLWYGCFAW 366
Score = 38.6 bits (78), Expect = 0.10
Identities = 20/49 (40%), Positives = 28/49 (57%)
Frame = +3 / -1
Query: 36 SLVV*TRCCKLKHLRQYHMCRKYPPSS*VWMFHMVIQDKIDLRLQRWLV 182
SLV * KLK R + +CR + P S VWMF MV ++ L R+++
Sbjct: 468 SLVG*IHFWKLKETRPFLLCRGFLPLSLVWMFRMVHHGRMYHPLLRYVM 322
Score = 33.1 bits (66), Expect = 4.6
Identities = 17/46 (36%), Positives = 21/46 (45%)
Frame = -3 / +1
Query: 173 PLQPKVYLVLDDHVKHPYLR*WWVLATHVVLTKMLQLAATSSDHQA 36
P Q V+ + H KHPY R*W +T Q +S HQA
Sbjct: 331 PQQWMVHSTVVHHAKHPYQR*W*EPSTQ*EWPGFFQFPKVNSTHQA 468
Score = 25.8 bits (50), Expect(2) = 2e-009
Identities = 17/42 (40%), Positives = 20/42 (47%)
Frame = -3 / +2
Query: 296 *GHHHQYPAA*TTRTSFLVWQIGCALMLYI*R*EAIDEN*PP 171
*GH ++P A*T W I C L I R +A N* P
Sbjct: 74 *GHGLRFPEA*TGNQ*SPPWVIECTRKLCIWRCKANPRN*QP 199
>gb|BF585842.1|BF585842 FM1_25_B08.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 651
Score = 120 bits (256), Expect = 3e-026
Identities = 42/51 (82%), Positives = 48/51 (94%)
Frame = +2 / +1
Query: 563 VCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFSADEMQEFVHSLSYVY 715
VCHP+NFDFYMC+HA MIGTTRPTHYH+LHDEIGF+ D++QE VHSLSYVY
Sbjct: 1 VCHPRNFDFYMCSHAXMIGTTRPTHYHILHDEIGFNPDDLQELVHSLSYVY 153
Score = 79.9 bits (168), Expect = 4e-014
Identities = 39/50 (78%), Positives = 41/50 (82%)
Frame = -2 / -2
Query: 714 YT*DSE*TNSCISSAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQ 565
YT*+SE T+SC SS KPISSCR ** VGLVVPII AC HM*KSKFLG Q
Sbjct: 152 YT*ESECTSSCRSSGLKPISSCRI***VGLVVPIIXACEHM*KSKFLG*Q 3
Score = 60.6 bits (126), Expect = 2e-008
Identities = 27/51 (52%), Positives = 36/51 (70%)
Frame = -1 / -1
Query: 715 VHVR*RMNKLLHLVCRETYLVVQNMIVGGPCCSNHPSMCTHVEVEVLRMAN 563
VHVR RM++LL ++ E YL++QNMI+ P +H SM THVEV+V M N
Sbjct: 153 VHVRERMHQLLQIIRIEAYLIMQNMIMSWPRSPDHXSMRTHVEVKVPWMTN 1
Score = 50.6 bits (104), Expect = 3e-005
Identities = 26/50 (52%), Positives = 29/50 (58%)
Frame = +3 / +2
Query: 564 FAILRTSTSTCVHMLG*LEQQGPPTIMFCTTR*VSLQTRCRSLFIRYLTC 713
F I T TSTCV ML * +G I+FC R* S+ CRS IR LTC
Sbjct: 2 FVIQGTLTSTCVRMLX*SGLRGQLIIIFCMMR*ASILMICRSWCIRSLTC 151
Score = 49.2 bits (101), Expect = 7e-005
Identities = 24/50 (48%), Positives = 30/50 (60%)
Frame = -3 / -3
Query: 713 TRKIANEQTPASRLQRNLSRRAEHDSGWALLFQSSQHVHTCRSRSS*DGK 564
TRK AN PA +LS AE+D+ A +S QH +TCRS+SS D K
Sbjct: 151 TRKRANAPAPADHQD*SLSHHAEYDNELAS*SRSXQHANTCRSQSSLDDK 2
Score = 39.6 bits (80), Expect = 0.054
Identities = 24/50 (48%), Positives = 30/50 (60%)
Frame = +1 / +3
Query: 565 LPS*ELRLLHVCTCWDDWNNKAHPLSCSARRDRFLCRRDAGVCSFAILRV 714
L S EL LLHV C +D + +A+ LS SA DR AG +FA+LRV
Sbjct: 3 LSSKEL*LLHVFACXNDRDYEANSLSYSA**DRLQS**SAGAGAFALLRV 152
>gb|CW288848.1|CW288848 104_767_11412169_116_35543_007 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11412169, DNA
sequence
Length = 644
Score = 74.8 bits (157), Expect(2) = 4e-026
Identities = 31/47 (65%), Positives = 39/47 (82%)
Frame = +2 / +1
Query: 35 KLGGLNSLLQVEASSSIPHVSQVPTIILGMDVSHGHPGQDRPSVAAV 175
+LGGLNSLL++E + +IP VS+VPTII GMDVSHG P + PS+AAV
Sbjct: 169 QLGGLNSLLEIERNQAIPIVSRVPTIIFGMDVSHGAPRSNVPSIAAV 309
Score = 66.1 bits (138), Expect(2) = 4e-026
Identities = 29/43 (67%), Positives = 33/43 (76%)
Frame = +2 / +3
Query: 173 VVSSRQWPLISRYRASVHTQSARLEMMSSLFKPRGTDDDGLIR 301
VVSS WP ISRYRASV T S R+E++ SLFKP G +D GLIR
Sbjct: 441 VVSSLGWPCISRYRASVCTLSPRVEIIDSLFKPXGNEDRGLIR 569
Score = 58.8 bits (122), Expect(2) = 3e-008
Identities = 27/48 (56%), Positives = 31/48 (64%)
Frame = -2 / -1
Query: 180 LTTAATEGLSCPG*PCETSIPKMMVGTCDTCGIDEDASTCSNEFRPPS 37
L TAA +G G PCETSIPK+MVGT DT G+ S +EF PPS
Sbjct: 314 LHTAAMDGTFDRGAPCETSIPKIMVGTLDTIGMAWFLSISKSEFNPPS 171
Score = 50.1 bits (103), Expect = 4e-005
Identities = 22/42 (52%), Positives = 29/42 (69%)
Frame = -2 / -2
Query: 270 GLNNEDIISSLADWVCTDALYLEIRGH*RELTTAATEGLSCP 145
GLN E IIS+L D V T+ALYLE++G +ELTT + + P
Sbjct: 538 GLNRESIISTLGDRVHTEALYLEMQGQPKELTTLSVQKYKVP 413
Score = 41.4 bits (84), Expect = 0.015
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +1 / +3
Query: 37 AWWSELVAAS*SIFVNTTCVASTHHHLRYGCFTW 138
AWW E +* ++ CV ++H+L YGCF W
Sbjct: 171 AWWVEFTFGN*KKPGHSYCVEGSYHYLWYGCFAW 272
Score = 38.6 bits (78), Expect = 0.10
Identities = 20/49 (40%), Positives = 28/49 (57%)
Frame = +3 / +2
Query: 36 SLVV*TRCCKLKHLRQYHMCRKYPPSS*VWMFHMVIQDKIDLRLQRWLV 182
SLV * KLK R + +CR + P S VWMF MV ++ L R+++
Sbjct: 170 SLVG*IHFWKLKETRPFLLCRGFLPLSLVWMFRMVHHGRMYHPLLRYVM 316
Score = 33.1 bits (66), Expect = 4.6
Identities = 17/46 (36%), Positives = 21/46 (45%)
Frame = -3 / -2
Query: 173 PLQPKVYLVLDDHVKHPYLR*WWVLATHVVLTKMLQLAATSSDHQA 36
P Q V+ + H KHPY R*W +T Q +S HQA
Sbjct: 307 PQQWMVHSTVVHHAKHPYQR*W*EPSTQ*EWPGFFQFPKVNSTHQA 170
Score = 21.7 bits (41), Expect(2) = 3e-008
Identities = 16/42 (38%), Positives = 19/42 (45%)
Frame = -3 / -3
Query: 296 *GHHHQYPAA*TTRTSFLVWQIGCALMLYI*R*EAIDEN*PP 171
*GH ++ A*T W I C L I R +A N* P
Sbjct: 564 *GHGLRFXEA*TGNQ*SPPWVIECTRKLCIWRCKANPRN*QP 439
>gb|CW272374.1|CW272374 104_744_11403400_116_36228_054 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11403400, DNA
sequence
Length = 671
Score = 105 bits (224), Expect(2) = 5e-025
Identities = 44/47 (93%), Positives = 46/47 (97%)
Frame = +2 / +3
Query: 35 KLGGLNSLLQVEASSSIPHVSQVPTIILGMDVSHGHPGQDRPSVAAV 175
+LGGLNSLLQVEAS SIPHVS+VPTIILGMDVSHGHPGQDRPSVAAV
Sbjct: 486 QLGGLNSLLQVEASPSIPHVSEVPTIILGMDVSHGHPGQDRPSVAAV 626
Score = 96.8 bits (205), Expect(2) = 2e-022
Identities = 40/47 (85%), Positives = 42/47 (89%)
Frame = -2 / -2
Query: 174 TAATEGLSCPG*PCETSIPKMMVGTCDTCGIDEDASTCSNEFRPPSF 34
TAATEGLSCPG P +TSIPKMMVGT DT GID DASTCSNEFRPPS+
Sbjct: 625 TAATEGLSCPGWP*DTSIPKMMVGTSDTWGIDGDASTCSNEFRPPSW 485
Score = 89.0 bits (188), Expect(2) = 1e-018
Identities = 36/49 (73%), Positives = 40/49 (81%)
Frame = -1 / -1
Query: 181 TNHRCNRRSILSWMTM*NIHT*DDGGYLRHMWY*RRCFNLQQRVQTTKL 35
T++ CN R ILSWM M +IHT DDGGY RHM Y* RCFNLQQR+QTTKL
Sbjct: 632 TSYGCN*RPILSWMAMRHIHTQDDGGYFRHMGY*WRCFNLQQRIQTTKL 486
Score = 86.3 bits (182), Expect(2) = 2e-018
Identities = 36/47 (76%), Positives = 38/47 (80%)
Frame = +3 / +1
Query: 30 MQSLVV*TRCCKLKHLRQYHMCRKYPPSS*VWMFHMVIQDKIDLRLQ 170
+ SLVV* RCCKLKHL QY MCRKYPPSS VWM M IQDKI L+LQ
Sbjct: 481 LTSLVV*IRCCKLKHLHQYPMCRKYPPSSWVWMCLMAIQDKIGLQLQ 621
Score = 81.3 bits (171), Expect = 2e-014
Identities = 34/45 (75%), Positives = 36/45 (80%)
Frame = -3 / -3
Query: 170 LQPKVYLVLDDHVKHPYLR*WWVLATHVVLTKMLQLAATSSDHQA 36
LQ K YLVLD H HPY R*WWVL TH VL +MLQLAAT+SDHQA
Sbjct: 621 LQLKAYLVLDGHETHPYPR*WWVLPTHGVLMEMLQLAATNSDHQA 487
Score = 72.5 bits (152), Expect(2) = 2e-013
Identities = 26/34 (76%), Positives = 28/34 (82%)
Frame = +1 / +2
Query: 37 AWWSELVAAS*SIFVNTTCVASTHHHLRYGCFTW 138
AWWSE VAAS*SI +NT CV STHHHL YGC +W
Sbjct: 488 AWWSEFVAAS*SISINTPCVGSTHHHLGYGCVSW 589
Score = 32.7 bits (65), Expect = 6.3
Identities = 15/28 (53%), Positives = 18/28 (64%)
Frame = -2 / -3
Query: 84 IDEDASTCSNEFRPPSFALIFISKLSRY 1
I E S ++ +FALIFISKLSRY
Sbjct: 450 ISEQYSAQEDKIMSQTFALIFISKLSRY 367
Score = 29.9 bits (59), Expect(2) = 5e-025
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = +2 / +2
Query: 2 YLLNLLMKINAKL 40
YLLNLLMKINAK+
Sbjct: 368 YLLNLLMKINAKV 406
Score = 29.9 bits (59), Expect(2) = 2e-022
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = -1 / -2
Query: 43 TKLCIDLHQQIKQV 2
+ LCI+LHQQIKQV
Sbjct: 409 SNLCINLHQQIKQV 368
Score = 27.2 bits (53), Expect(2) = 2e-018
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = +1 / +1
Query: 1 VPA*FADEDQCK 36
VPA*FADED CK
Sbjct: 367 VPA*FADED*CK 402
Score = 25.4 bits (49), Expect(2) = 1e-018
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = -3 / -1
Query: 56 TSSDHQALH*SSSAN*AG 3
T S + LH*SSSAN*AG
Sbjct: 422 TKSCLKPLH*SSSAN*AG 369
Score = 24.0 bits (46), Expect(2) = 2e-013
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = +3 / +3
Query: 3 TCLIC**RSMQ 35
TCLIC**R MQ
Sbjct: 369 TCLIC**RLMQ 401
>gb|CW452022.1|CW452022 fsbb001f192f20k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f192f20, DNA
sequence
Length = 703
Score = 73.0 bits (153), Expect(2) = 6e-025
Identities = 26/32 (81%), Positives = 30/32 (93%)
Frame = +2 / +1
Query: 617 GTTRPTHYHVLHDEIGFSADEMQEFVHSLSYV 712
GTTRPTHYH+LHDEIGF+ D++QE VHSLSYV
Sbjct: 457 GTTRPTHYHILHDEIGFNPDDLQELVHSLSYV 552
Score = 64.3 bits (134), Expect(2) = 6e-025
Identities = 22/25 (88%), Positives = 25/25 (100%)
Frame = +2 / +2
Query: 542 GTVVDSKVCHPKNFDFYMCAHAGMI 616
GTVVD+KVCHP+NFDFYMC+HAGMI
Sbjct: 62 GTVVDNKVCHPRNFDFYMCSHAGMI 136
Score = 54.2 bits (112), Expect(2) = 1e-014
Identities = 23/29 (79%), Positives = 26/29 (89%)
Frame = -2 / -2
Query: 627 LVVPIIPACAHM*KSKFLGWQTLLSTTVP 541
+++ IIPAC HM*KSKFLG QTLLSTTVP
Sbjct: 147 VMLTIIPACEHM*KSKFLG*QTLLSTTVP 61
Score = 48.3 bits (99), Expect(2) = 1e-014
Identities = 24/33 (72%), Positives = 26/33 (78%)
Frame = -2 / -3
Query: 714 YT*DSE*TNSCISSAEKPISSCRT**WVGLVVP 616
YT*+SE T+SC SS KPISSC ** VGLVVP
Sbjct: 554 YT*ESECTSSCRSSGLKPISSCSI***VGLVVP 456
Score = 39.1 bits (79), Expect(2) = 2e-006
Identities = 17/28 (60%), Positives = 20/28 (71%)
Frame = -3 / -3
Query: 626 LLFQSSQHVHTCRSRSS*DGKLYYPPQF 543
L +S QHV+TCRS+SS D KL P QF
Sbjct: 146 LCLRSFQHVNTCRSQSSLDDKLCCPQQF 63
Score = 39.1 bits (79), Expect(2) = 3e-005
Identities = 16/28 (57%), Positives = 17/28 (60%)
Frame = +3 / +3
Query: 525 QTMFFLELWWIVKFAILRTSTSTCVHML 608
Q + EL W KF I T TSTCVHML
Sbjct: 45 QWFYLQELLWTTKFVIQGTLTSTCVHML 128
Score = 37.3 bits (75), Expect = 0.26
Identities = 15/25 (60%), Positives = 19/25 (76%)
Frame = -1 / -1
Query: 616 NHPSMCTHVEVEVLRMANFTIHHSS 542
+H SM THVEV+V M NF +H+SS
Sbjct: 136 DHSSM*THVEVKVPWMTNFVVHNSS 62
Score = 35.9 bits (72), Expect = 0.68
Identities = 16/24 (66%), Positives = 17/24 (70%)
Frame = +1 / +1
Query: 544 NCGG**SLPS*ELRLLHVCTCWDD 615
NC G SL S EL LLHV TCW+D
Sbjct: 64 NCCGQQSLSSKEL*LLHVFTCWND 135
Score = 35.4 bits (71), Expect(2) = 2e-006
Identities = 14/30 (46%), Positives = 22/30 (73%)
Frame = -1 / -2
Query: 715 VHVR*RMNKLLHLVCRETYLVVQNMIVGGP 626
+HVR RM++LL ++ E YL++Q MI+ P
Sbjct: 555 LHVRERMHQLLQIIRIEAYLIMQYMIMSWP 466
Score = 31.3 bits (62), Expect(2) = 3e-005
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +3 / +2
Query: 624 QGPPTIMFCTTR*VSLQTRCRSLFIRYLTC 713
+G I++C R* S+ CRS IR LTC
Sbjct: 464 RGQLIIIYCMMR*ASILMICRSWCIRSLTC 553
>gb|CW356188.1|CW356188 fsbb001f021c08k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f021c08, DNA
sequence
Length = 601
Score = 94.5 bits (200), Expect(3) = 1e-024
Identities = 33/68 (48%), Positives = 50/68 (73%)
Frame = +2 / -2
Query: 512 QTASPDNVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFSADEMQEF 691
Q NV PGTVVD+ V P +DFY+C+H G++GT+RPTHY+ L DE GF +D++Q+
Sbjct: 420 QQTKTGNVPPGTVVDTGVVDPSAYDFYLCSHTGLLGTSRPTHYYSLVDEHGFGSDDLQKL 241
Query: 692 VHSLSYVY 715
+++L +V+
Sbjct: 240 IYNLCFVF 217
Score = 51.5 bits (106), Expect = 1e-005
Identities = 29/51 (56%), Positives = 31/51 (60%)
Frame = -2 / +2
Query: 684 CISSAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPGRT 532
C SS KP SS R ** VGL+VP P H *KS G T +STTVPG T
Sbjct: 248 CRSSDPKPCSSTRL**CVGLLVPRSPVWLHR*KSYADGSTTPVSTTVPGGT 400
Score = 36.8 bits (74), Expect = 0.36
Identities = 17/56 (30%), Positives = 32/56 (57%)
Frame = -1 / +1
Query: 697 MNKLLHLVCRETYLVVQNMIVGGPCCSNHPSMCTHVEVEVLRMANFTIHHSSRKNI 530
+++LL +V E LV Q ++V P P + VEV R+ + ++HH +R+++
Sbjct: 235 VDQLLQVVRPEAVLVHQAVVVCRPARP*KPGVAAQVEVVCRRVNHTSVHHRARRHV 402
Score = 32.7 bits (65), Expect(3) = 1e-024
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +2 / -2
Query: 455 WSPKFTVIVAQKNHHTKFF 511
++P TVIVA+K HHT+ F
Sbjct: 495 YAPTITVIVAKKRHHTRLF 439
Score = 24.9 bits (48), Expect(3) = 1e-024
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = +2 / -1
Query: 344 PEHIIIFRDGVSE 382
P+ II FRDGVS+
Sbjct: 601 PQKIIYFRDGVSD 563
>gb|BE359363.1|BE359363 DG1_40_D01.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 678
Score = 114 bits (244), Expect = 1e-024
Identities = 41/62 (66%), Positives = 50/62 (80%)
Frame = +2 / +1
Query: 530 NVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFSADEMQEFVHSLSY 709
N+LPGTVVDSK+CHP FDFY+C+HAG+ GT+RP HYHVL DE FSADE+Q ++L Y
Sbjct: 37 NILPGTVVDSKICHPTEFDFYLCSHAGIKGTSRPAHYHVLWDENNFSADELQTLTNNLCY 216
Query: 710 VY 715
Y
Sbjct: 217 TY 222
Score = 54.2 bits (112), Expect = 2e-006
Identities = 28/49 (57%), Positives = 33/49 (67%)
Frame = -2 / -2
Query: 684 CISSAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPG 538
C SSAEK SS +T** G +VP++PA H *KS +G Q STTVPG
Sbjct: 191 CNSSAEKLFSSHKT***AGRLVPLMPAWLHK*KSNSVG*QIFESTTVPG 45
>gb|BF587838.1|BF587838 FM1_33_F06.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 437
Score = 114 bits (244), Expect = 1e-024
Identities = 41/62 (66%), Positives = 50/62 (80%)
Frame = +2 / +3
Query: 530 NVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFSADEMQEFVHSLSY 709
N+LPGTVVDSK+CHP FDFY+C+HAG+ GT+RP HYHVL DE FSADE+Q ++L Y
Sbjct: 30 NILPGTVVDSKICHPTEFDFYLCSHAGIKGTSRPAHYHVLWDENNFSADELQTLTNNLCY 209
Query: 710 VY 715
Y
Sbjct: 210 TY 215
Score = 54.2 bits (112), Expect = 2e-006
Identities = 28/49 (57%), Positives = 33/49 (67%)
Frame = -2 / -2
Query: 684 CISSAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPG 538
C SSAEK SS +T** G +VP++PA H *KS +G Q STTVPG
Sbjct: 184 CNSSAEKLFSSHKT***AGRLVPLMPAWLHK*KSNSVG*QIFESTTVPG 38
>gb|BM324187.1|BM324187 PIC1_25_D06.b1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 512
Score = 95.0 bits (201), Expect(2) = 3e-021
Identities = 41/61 (67%), Positives = 47/61 (77%)
Frame = +2 / +3
Query: 2 YLLNLLMKINAKLGGLNSLLQVEASSSIPHVSQVPTIILGMDVSHGHPGQDRPSVAAVVS 181
YL N+L+KINAKLGG+NSLLQ+E S +IP VS+VPTIILGMDVSHG PG A V
Sbjct: 249 YLTNVLLKINAKLGGMNSLLQIETSPAIPQVSKVPTIILGMDVSHGSPGHSDVPSIAAVV 428
Query: 182 S 184
S
Sbjct: 429 S 431
Score = 73.5 bits (154), Expect(2) = 2e-024
Identities = 34/59 (57%), Positives = 36/59 (61%)
Frame = -2 / -2
Query: 177 TTAATEGLSCPG*PCETSIPKMMVGTCDTCGIDEDASTCSNEFRPPSFALIFISKLSRY 1
T A CPG P ETSIPK++VGT DT GI D S SNEF PPSFA IF RY
Sbjct: 424 TAAMDGTSECPGEPWETSIPKIIVGTLDT*GIAGDVSIWSNEFMPPSFAFIFSRTFVRY 248
Score = 67.0 bits (140), Expect(2) = 6e-017
Identities = 27/37 (72%), Positives = 33/37 (89%)
Frame = +2 / +3
Query: 152 DRPSVAAVVSSRQWPLISRYRASVHTQSARLEMMSSL 262
D PS+AAVVSSR+WPLIS+YRASV TQS ++EM+ SL
Sbjct: 402 DVPSIAAVVSSREWPLISKYRASVRTQSPKMEMIDSL 512
Score = 60.2 bits (125), Expect(2) = 2e-024
Identities = 26/36 (72%), Positives = 28/36 (77%)
Frame = -2 / -2
Query: 258 EDIISSLADWVCTDALYLEIRGH*RELTTAATEGLS 151
E IIS L DWV T+ALY EIRGH RELTTAA +G S
Sbjct: 508 ESIISILGDWVRTEALYFEIRGHSRELTTAAMDGTS 401
Score = 41.4 bits (84), Expect(2) = 6e-017
Identities = 15/39 (38%), Positives = 25/39 (64%)
Frame = +1 / +2
Query: 22 EDQCKAWWSELVAAS*SIFVNTTCVASTHHHLRYGCFTW 138
+D+CKA W E VA +*+I N++ + +++L GC W
Sbjct: 269 KDKCKAGWHEFVAPN*NIPSNSSSIQGPNYNLGNGCLPW 385
Score = 39.1 bits (79), Expect(2) = 5e-006
Identities = 20/37 (54%), Positives = 22/37 (59%)
Frame = -1 / -1
Query: 262 QRGHHF*SGRLGVH*CSISRDKRPLTRTNHRCNRRSI 152
QR +HF LG SI RDKRP TRTN+ N R I
Sbjct: 512 QRVNHFHLR*LGADRSSIFRDKRPFTRTNNSSNGRYI 402
Score = 32.2 bits (64), Expect(2) = 5e-006
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = -1 / -1
Query: 73 CFNLQQRVQTTKLCIDL 23
CFNL+QR+ T+LCI L
Sbjct: 320 CFNLEQRIHATQLCIYL 270
Score = 29.9 bits (59), Expect(2) = 0.14
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = +3 / +1
Query: 21 *RSMQSLVV*TRCCKLKHLRQY 86
*R MQS V * RC KLKH +Q+
Sbjct: 268 *R*MQSWVA*IRCSKLKHPQQF 333
Score = 29.9 bits (59), Expect(2) = 0.64
Identities = 16/27 (59%), Positives = 17/27 (62%)
Frame = -3 / -3
Query: 233 IGCALMLYI*R*EAIDEN*PPLQPKVY 153
IGC LYI R*EAI EN* Q V+
Sbjct: 483 IGCGQKLYISR*EAIHEN*QQQQWTVH 403
Score = 28.1 bits (55), Expect(2) = 3e-021
Identities = 13/19 (68%), Positives = 14/19 (73%)
Frame = +3 / +1
Query: 177 LVLVNGLLSLDIEHQCTPN 233
LVLVNGLLS +IE PN
Sbjct: 427 LVLVNGLLSRNIELLSAPN 483
Score = 25.8 bits (50), Expect(2) = 0.14
Identities = 13/21 (61%), Positives = 13/21 (61%)
Frame = +1 / +2
Query: 190 MASYL*I*SISAHPICQTRND 252
MASYL I*S HPI ND
Sbjct: 440 MASYLEI*SFCPHPIT*DGND 502
Score = 23.5 bits (45), Expect(2) = 0.64
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = -3 / -3
Query: 83 LTKMLQLAATSSDHQALH 30
L M Q AT+S H ALH
Sbjct: 330 LLGMFQFGATNSCHPALH 277
>gb|CF485232.1|CF485232 POL1_30_F05.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_30_F05_A002 3', mRNA sequence
Length = 638
Score = 113 bits (242), Expect = 2e-024
Identities = 40/48 (83%), Positives = 46/48 (95%)
Frame = +2 / +3
Query: 572 PKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFSADEMQEFVHSLSYVY 715
P+NFDFYMC+HAGMIGTTRPTHYH+LHDEIGF+ D++QE VHSLSYVY
Sbjct: 3 PRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFNPDDLQELVHSLSYVY 146
Score = 80.8 bits (170), Expect = 2e-014
Identities = 38/48 (79%), Positives = 40/48 (83%)
Frame = -2 / -2
Query: 714 YT*DSE*TNSCISSAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLG 571
YT*+SE T+SC SS KPISSC ** VGLVVPIIPAC HM*KSKFLG
Sbjct: 145 YT*ESECTSSCRSSGLKPISSCSI***VGLVVPIIPACEHM*KSKFLG 2
Score = 54.7 bits (113), Expect = 2e-006
Identities = 24/46 (52%), Positives = 33/46 (71%)
Frame = -1 / -1
Query: 715 VHVR*RMNKLLHLVCRETYLVVQNMIVGGPCCSNHPSMCTHVEVEV 578
VHVR RM++LL ++ E YL++Q MI+ P +H SM THVEV+V
Sbjct: 146 VHVRERMHQLLQIIRIEAYLIMQYMIMSWPRSPDHSSM*THVEVKV 9
Score = 49.6 bits (102), Expect = 5e-005
Identities = 24/45 (53%), Positives = 28/45 (62%)
Frame = +3 / +1
Query: 579 TSTSTCVHMLG*LEQQGPPTIMFCTTR*VSLQTRCRSLFIRYLTC 713
T TSTCVHML * +G I++C R* S+ CRS IR LTC
Sbjct: 10 TLTSTCVHMLE*SGLRGQLIIIYCMMR*ASILMICRSWCIRSLTC 144
Score = 45.1 bits (92), Expect = 0.001
Identities = 23/48 (47%), Positives = 29/48 (60%)
Frame = -3 / -3
Query: 713 TRKIANEQTPASRLQRNLSRRAEHDSGWALLFQSSQHVHTCRSRSS*D 570
TRK AN PA +LS A +D+ A +S QHV+TCRS+SS D
Sbjct: 144 TRKRANAPAPADHQD*SLSHHAVYDNELAS*SRSFQHVNTCRSQSSLD 1
Score = 45.1 bits (92), Expect = 0.001
Identities = 23/46 (50%), Positives = 30/46 (65%)
Frame = +1 / +2
Query: 577 ELRLLHVCTCWDDWNNKAHPLSCSARRDRFLCRRDAGVCSFAILRV 714
EL LLHV TCW+D + +A+ LS +A DR AG +FA+LRV
Sbjct: 8 EL*LLHVFTCWNDRDYEANSLSYTA**DRLQS**SAGAGAFALLRV 145
>gb|CW410447.1|CW410447 fsbb001f105d07f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f105d07, DNA
sequence
Length = 777
Score = 96.8 bits (205), Expect(2) = 6e-024
Identities = 34/58 (58%), Positives = 45/58 (77%)
Frame = +2 / +3
Query: 536 LPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFSADEMQEFVHSLSY 709
+ GTVVDSK+CHP FDF++C+HAG+ GT+RP HYHVL DE F+AD +Q ++L Y
Sbjct: 564 IAGTVVDSKICHPTEFDFFLCSHAGIKGTSRPAHYHVLWDENNFTADALQTLTNNLCY 737
Score = 49.2 bits (101), Expect(2) = 1e-005
Identities = 24/48 (50%), Positives = 30/48 (62%)
Frame = -2 / -3
Query: 684 CISSAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVP 541
C +SA K SS +T * G +VP++PA H KS +GWQ STTVP
Sbjct: 712 CNASAVKLFSSHKTW**AGRLVPLMPAWLHRKKSNSVGWQIFESTTVP 569
Score = 37.3 bits (75), Expect(2) = 6e-024
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +2 / +1
Query: 431 ACKFLDEKWSPKFTVIVAQKNHHTKFF 511
AC L+ + P+ T IV QK HHT+ F
Sbjct: 322 ACASLEANYQPQVTFIVVQKRHHTRLF 402
Score = 31.8 bits (63), Expect(2) = 1.9
Identities = 17/42 (40%), Positives = 21/42 (50%)
Frame = +2 / +3
Query: 365 RDGVSESQFTQVINIELDQIIEACKFLDEKWSPKFTVIVAQK 490
RDGVSE QF QV+ ELD I + F + V+ K
Sbjct: 168 RDGVSEGQFYQVLLHELDAIRKVTFFFPFHFGDTVRVVATCK 293
Score = 23.1 bits (44), Expect(2) = 1e-005
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = -2 / -3
Query: 417 SSSMLMTWVN*LSLTPSL 364
S+S TW N SLTPSL
Sbjct: 220 SNSCSRTW*NCPSLTPSL 167
Score = 22.1 bits (42), Expect(2) = 1.9
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +3 / +1
Query: 546 LWWIVKFAILRTSTSTCVHML 608
L W + A L++ TS+C ML
Sbjct: 574 LLWTRRSATLQSLTSSCAAML 636
>gb|CW410448.1|CW410448 fsbb001f105d07k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f105d07, DNA
sequence
Length = 826
Score = 96.8 bits (205), Expect(2) = 6e-024
Identities = 34/58 (58%), Positives = 45/58 (77%)
Frame = +2 / -3
Query: 536 LPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFSADEMQEFVHSLSY 709
+ GTVVDSK+CHP FDF++C+HAG+ GT+RP HYHVL DE F+AD +Q ++L Y
Sbjct: 347 IAGTVVDSKICHPTEFDFFLCSHAGIKGTSRPAHYHVLWDENNFTADALQTLTNNLCY 174
Score = 49.2 bits (101), Expect(2) = 1e-005
Identities = 24/48 (50%), Positives = 30/48 (62%)
Frame = -2 / +1
Query: 684 CISSAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVP 541
C +SA K SS +T * G +VP++PA H KS +GWQ STTVP
Sbjct: 199 CNASAVKLFSSHKTW**AGRLVPLMPAWLHRKKSNSVGWQIFESTTVP 342
Score = 37.3 bits (75), Expect(2) = 6e-024
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +2 / -1
Query: 431 ACKFLDEKWSPKFTVIVAQKNHHTKFF 511
AC L+ + P+ T IV QK HHT+ F
Sbjct: 589 ACASLEANYQPQVTFIVVQKRHHTRLF 509
Score = 31.8 bits (63), Expect(2) = 2.0
Identities = 17/42 (40%), Positives = 21/42 (50%)
Frame = +2 / -3
Query: 365 RDGVSESQFTQVINIELDQIIEACKFLDEKWSPKFTVIVAQK 490
RDGVSE QF QV+ ELD I + F + V+ K
Sbjct: 743 RDGVSEGQFYQVLLHELDAIRKVTFFFPFHFGDTVRVVATCK 618
Score = 23.1 bits (44), Expect(2) = 1e-005
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = -2 / +1
Query: 417 SSSMLMTWVN*LSLTPSL 364
S+S TW N SLTPSL
Sbjct: 691 SNSCSRTW*NCPSLTPSL 744
Score = 22.1 bits (42), Expect(2) = 2.0
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +3 / -1
Query: 546 LWWIVKFAILRTSTSTCVHML 608
L W + A L++ TS+C ML
Sbjct: 337 LLWTRRSATLQSLTSSCAAML 275
>gb|CF487966.1|CF487966 POL1_47_A08.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_47_A08_A002 3', mRNA sequence
Length = 628
Score = 111 bits (237), Expect = 1e-023
Identities = 40/67 (59%), Positives = 51/67 (76%)
Frame = +2 / +3
Query: 515 TASPDNVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFSADEMQEFV 694
T N+LPGTVVD+ +CHP FDFY+C+HAG+ GT+RPTHYHVL+DE FSAD +Q
Sbjct: 30 TDKSGNILPGTVVDTSICHPSEFDFYLCSHAGIKGTSRPTHYHVLYDENRFSADALQFLT 209
Query: 695 HSLSYVY 715
++L Y Y
Sbjct: 210 NNLCYTY 230
Score = 65.2 bits (136), Expect = 1e-009
Identities = 33/51 (64%), Positives = 38/51 (74%)
Frame = -2 / -1
Query: 687 SCISSAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPGR 535
+C +SAEK SS RT** VGL+VP+IPA *KS LG Q L+STTVPGR
Sbjct: 202 NCRASAEKRFSS*RT**CVGLLVPLIPAWLQR*KSNSLG*QMLVSTTVPGR 50
Score = 62.9 bits (131), Expect = 5e-009
Identities = 25/52 (48%), Positives = 37/52 (71%)
Frame = -1 / -3
Query: 685 LHLVCRETYLVVQNMIVGGPCCSNHPSMCTHVEVEVLRMANFTIHHSSRKNI 530
L + RET L++++MIV P CS + SM T VE+++ M N +I+HSSRKN+
Sbjct: 200 LQSISRETVLIIEDMIVCWPACSLNSSMATEVEIKLAGMTNASINHSSRKNV 45
Score = 41.8 bits (85), Expect = 0.011
Identities = 24/50 (48%), Positives = 26/50 (52%)
Frame = +3 / +1
Query: 534 FFLELWWIVKFAILRTSTSTCVHMLG*LEQQGPPTIMFCTTR*VSLQTRC 683
FFLELW I+ F I + ST V ML EQ G TIM R VS C
Sbjct: 49 FFLELWLILAFVIPASLISTSVAMLELREQAGQHTIMSSMMRTVSRLMLC 198
Score = 40.9 bits (83), Expect = 0.021
Identities = 22/50 (44%), Positives = 26/50 (52%)
Frame = -3 / -2
Query: 683 ASRLQRNLSRRAEHDSGWALLFQSSQHVHTCRSRSS*DGKLYYPPQFQEE 534
A RN S HDS A LF QH + R+++ D K Y PQFQEE
Sbjct: 198 AEHQPRNGSHHRGHDSVLACLFP*FQHGYRGRNQTRWDDKC*YQPQFQEE 49
Score = 37.7 bits (76), Expect = 0.19
Identities = 18/40 (45%), Positives = 24/40 (60%)
Frame = +1 / +2
Query: 526 RQCSSWNCGG**SLPS*ELRLLHVCTCWDDWNNKAHPLSC 645
R+ SSWNCG * L S + L + CW+ N +A+ LSC
Sbjct: 41 RKHSSWNCG*Y*HLSSQRV*FLPL*PCWN*GNKQANTLSC 160
>gb|BG103154.1|BG103154 RHIZ2_18_G08.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 567
Score = 110 bits (235), Expect = 2e-023
Identities = 41/75 (54%), Positives = 52/75 (69%)
Frame = +2 / +1
Query: 491 NHHTKFFQTASPDNVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFS 670
N+H N+LPGTVVDSK+CHP FDFY+C+HAG+ GT+RP HYHVL DE F+
Sbjct: 31 NNHNDQRAVDKSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFT 210
Query: 671 ADEMQEFVHSLSYVY 715
AD +Q ++L Y Y
Sbjct: 211 ADGLQTLTNNLCYTY 255
Score = 55.1 bits (114), Expect = 1e-006
Identities = 27/49 (55%), Positives = 30/49 (61%)
Frame = -2 / -2
Query: 684 CISSAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPG 538
C SA SS RT**W G +VP +PA *KS +GWQ STTVPG
Sbjct: 224 CNPSAVNLFSSHRT**WAGRLVP*MPAWLQR*KSNSVGWQIFESTTVPG 78
Score = 45.1 bits (92), Expect = 0.001
Identities = 18/43 (41%), Positives = 29/43 (67%)
Frame = -1 / -1
Query: 658 LVVQNMIVGGPCCSNHPSMCTHVEVEVLRMANFTIHHSSRKNI 530
L+ Q+MI+G CS + SM T VE++ MA+ +HHS+R+ +
Sbjct: 198 LIPQDMIMGRAACSLNASMATEVEIKFSWMADL*VHHSTRQYV 70
Score = 34.5 bits (69), Expect = 1.8
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = +1 / +3
Query: 535 SSWNCGG**SLPS*ELRLLHVCTCWDDWNNKAHPLSC 645
++W CGG LPS + L + CW N PLSC
Sbjct: 75 TAWYCGGLKDLPSN*I*FLPL*PCWHSGNKPPCPLSC 185
Score = 34.1 bits (68), Expect = 2.4
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = -3 / -3
Query: 644 HDSGWALLFQSSQHVHTCRSRSS*DGKLYYPPQFQ 540
HD+G LF QH + R++ DG+ PPQ+Q
Sbjct: 184 HDNGQGGLFPECQHGYRGRNQIQLDGRSLSPPQYQ 80
>gb|CW257089.1|CW257089 104_722_11227151_148_35148_090 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11227151, DNA
sequence
Length = 681
Score = 54.2 bits (112), Expect(3) = 3e-023
Identities = 18/25 (72%), Positives = 22/25 (88%)
Frame = +2 / +2
Query: 542 GTVVDSKVCHPKNFDFYMCAHAGMI 616
GTVVD+ +CHP+ +DFYMCAHAG I
Sbjct: 419 GTVVDTGICHPRYYDFYMCAHAGRI 493
Score = 51.0 bits (105), Expect(3) = 3e-023
Identities = 18/27 (66%), Positives = 22/27 (81%)
Frame = +2 / +3
Query: 449 EKWSPKFTVIVAQKNHHTKFFQTASPD 529
+ W PKFTVIVAQKNHHT+FF+ + D
Sbjct: 246 DTWLPKFTVIVAQKNHHTRFFRDGNND 326
Score = 46.9 bits (96), Expect(3) = 1e-014
Identities = 20/34 (58%), Positives = 25/34 (73%)
Frame = -2 / -1
Query: 615 IIPACAHM*KSKFLGWQTLLSTTVPGRTLSGDAV 514
I+PA AHM*KS +LGWQ +STTVP R L + +
Sbjct: 492 ILPA*AHM*KS*YLGWQIPVSTTVPARGLQDEDI 391
Score = 41.8 bits (85), Expect(3) = 3e-023
Identities = 18/27 (66%), Positives = 20/27 (74%)
Frame = +2 / +1
Query: 362 FRDGVSESQFTQVINIELDQIIEACKF 442
FRDGVSE +F V+NIEL QIIE F
Sbjct: 67 FRDGVSEGEFKHVLNIELAQIIEVETF 147
Score = 37.3 bits (75), Expect(3) = 1e-014
Identities = 16/21 (76%), Positives = 16/21 (76%)
Frame = -2 / -3
Query: 510 KNLVWWFF*ATITVNLGDHFS 448
KNLV WFF ATITVNLG S
Sbjct: 307 KNLV*WFFCATITVNLGSQVS 245
Score = 33.6 bits (67), Expect(3) = 1e-014
Identities = 14/23 (60%), Positives = 18/23 (78%)
Frame = -1 / -1
Query: 430 LDDLIQLNVDDLGKLTFTDSIPE 362
L+DL QLNV ++ KL T+SIPE
Sbjct: 135 LNDLCQLNVQNMLKLALTNSIPE 67
Score = 33.1 bits (66), Expect(2) = 0.001
Identities = 10/15 (66%), Positives = 13/15 (86%)
Frame = +1 / +2
Query: 463 QVHCDCCSKEPPHQV 507
QVH DCC++EP H+V
Sbjct: 260 QVHSDCCAEEPSHKV 304
Score = 32.7 bits (65), Expect(3) = 8e-005
Identities = 16/33 (48%), Positives = 21/33 (63%)
Frame = -2 / -2
Query: 459 DHFSSRNLHASMI*SSSMLMTWVN*LSLTPSLK 361
+ + N+ SMI +SSM T +N SLTPSLK
Sbjct: 164 EQITGGNVSTSMICASSMFRTCLNSPSLTPSLK 66
Score = 29.9 bits (59), Expect(2) = 0.19
Identities = 15/25 (60%), Positives = 18/25 (72%)
Frame = -3 / -3
Query: 437 YMPR*SDPAQC**PG*TDFH*LHP* 363
++P+*S PAQC *T H*LHP*
Sbjct: 142 FLPQ*SVPAQCSEHA*TRPH*LHP* 68
Score = 29.9 bits (59), Expect(2) = 0.001
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = +1 / +3
Query: 361 FQGWSQ*KSVYPGHQH*AGSDHRG 432
FQGWS * V +H*AG+DH G
Sbjct: 66 FQGWS**GRV*ACSEH*AGTDH*G 137
Score = 27.2 bits (53), Expect(3) = 8e-005
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = -1 / -2
Query: 499 VVVLLSNNHSELG*P 455
V+VLL NNH ELG P
Sbjct: 296 VMVLLRNNHCELGEP 252
Score = 25.4 bits (49), Expect(2) = 0.19
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = -3 / -1
Query: 509 RTWCGGSFEQQSQ*TW 462
+T C GS QQS *TW
Sbjct: 306 KTLCDGSSAQQSL*TW 259
Score = 23.5 bits (45), Expect(3) = 8e-005
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = -1 / -3
Query: 616 NHPSMCTHVEVEVLRMANFTIHHSS 542
N + THVE+ V +A+ +H+S+
Sbjct: 493 NPAGVSTHVEIIVSGVADSRVHNST 419
>gb|CL187586.1|CL187586 104_403_10900988_116_32466_076 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10900988, DNA
sequence
Length = 616
Score = 67.0 bits (140), Expect(3) = 5e-023
Identities = 29/43 (67%), Positives = 34/43 (79%)
Frame = +2 / -3
Query: 173 VVSSRQWPLISRYRASVHTQSARLEMMSSLFKPRGTDDDGLIR 301
VVSS WP ISRYRASV T S R+E++ SLFKP+G +D GLIR
Sbjct: 587 VVSSLGWPXISRYRASVCTLSPRVEIIDSLFKPQGNEDRGLIR 459
Score = 49.2 bits (101), Expect(3) = 4e-012
Identities = 22/42 (52%), Positives = 28/42 (66%)
Frame = -2 / +1
Query: 270 GLNNEDIISSLADWVCTDALYLEIRGH*RELTTAATEGLSCP 145
GLN E IIS+L D V T+ALYLE+ G +ELTT + + P
Sbjct: 490 GLNRESIISTLGDRVHTEALYLEMXGQPKELTTLSVQKYKVP 615
Score = 41.8 bits (85), Expect(3) = 5e-023
Identities = 18/27 (66%), Positives = 20/27 (74%)
Frame = +2 / -2
Query: 362 FRDGVSESQFTQVINIELDQIIEACKF 442
FRDGVSE +F V+NIEL QIIE F
Sbjct: 174 FRDGVSEGEFKHVLNIELAQIIEVETF 94
Score = 40.0 bits (81), Expect(3) = 5e-023
Identities = 15/22 (68%), Positives = 18/22 (81%)
Frame = +2 / -3
Query: 302 ESLIDFYTSSGKRKPEHIIIFR 367
E L DFY SSGK++PE +IIFR
Sbjct: 362 ELLFDFYLSSGKQRPEQVIIFR 297
Score = 33.6 bits (67), Expect(3) = 4e-012
Identities = 14/23 (60%), Positives = 18/23 (78%)
Frame = -1 / +1
Query: 430 LDDLIQLNVDDLGKLTFTDSIPE 362
L+DL QLNV ++ KL T+SIPE
Sbjct: 106 LNDLCQLNVQNMLKLALTNSIPE 174
Score = 32.7 bits (65), Expect(3) = 1e-004
Identities = 16/33 (48%), Positives = 21/33 (63%)
Frame = -2 / +2
Query: 459 DHFSSRNLHASMI*SSSMLMTWVN*LSLTPSLK 361
+ + N+ SMI +SSM T +N SLTPSLK
Sbjct: 77 EQITGGNVSTSMICASSMFRTCLNSPSLTPSLK 175
Score = 29.9 bits (59), Expect(2) = 0.10
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = +1 / -1
Query: 361 FQGWSQ*KSVYPGHQH*AGSDHRG 432
FQGWS * V +H*AG+DH G
Sbjct: 175 FQGWS**GRV*ACSEH*AGTDH*G 104
Score = 29.9 bits (59), Expect(2) = 0.64
Identities = 15/25 (60%), Positives = 18/25 (72%)
Frame = -3 / +3
Query: 437 YMPR*SDPAQC**PG*TDFH*LHP* 363
++P+*S PAQC *T H*LHP*
Sbjct: 99 FLPQ*SVPAQCSEHA*TRPH*LHP* 173
Score = 29.0 bits (57), Expect(2) = 0.64
Identities = 14/23 (60%), Positives = 15/23 (65%)
Frame = +3 / -3
Query: 363 SGMESVKVSLPRSSTLSWIRSSR 431
SGME V+ SL TLSW RS R
Sbjct: 173 SGMELVRASLSMF*TLSWHRSLR 105
Score = 28.6 bits (56), Expect(3) = 4e-012
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = -1 / +3
Query: 367 PENNYVFWFSLSRASVEV 314
PEN+ +FW L+RA VE+
Sbjct: 297 PENDDLFWSLLTRAKVEI 350
Score = 26.3 bits (51), Expect(3) = 1e-004
Identities = 17/42 (40%), Positives = 20/42 (47%)
Frame = -3 / +2
Query: 296 *GHHHQYPAA*TTRTSFLVWQIGCALMLYI*R*EAIDEN*PP 171
*GH ++P A*T W I C L I R +A N* P
Sbjct: 464 *GHGLRFPEA*TGNQ*SPPWVIECTRKLCIWRXQANPRN*QP 589
Score = 26.3 bits (51), Expect(2) = 0.10
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +1 / -2
Query: 319 LH*LWKAKTRTHNYFQ 366
L *LW AKTRT ++FQ
Sbjct: 345 LP*LW*AKTRTSHHFQ 298
Score = 24.4 bits (47), Expect(2) = 0.64
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +3 / -1
Query: 318 STLALESENQNT*LFSGM 371
STLAL S++QN FSG+
Sbjct: 346 STLALVSKDQNKSSFSGL 293
Score = 24.0 bits (46), Expect(3) = 1e-004
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -2 / +1
Query: 369 SLKIIMCSGFRFPELV*K 316
+LK++ CSG PEL *K
Sbjct: 295 NLKMMTCSGLCLPELR*K 348
Score = 23.5 bits (45), Expect(2) = 0.64
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = -3 / +2
Query: 374 LHP*K*LCVLVFAFQS*CRSRSV 306
L *K* VLVFA+QS* R++ +
Sbjct: 290 LQT*K**LVLVFAYQS*GRNQII 358
>gb|CW140519.1|CW140519 104_531_11135826_148_34921_077 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11135826, DNA
sequence
Length = 649
Score = 67.0 bits (140), Expect(3) = 5e-023
Identities = 29/43 (67%), Positives = 34/43 (79%)
Frame = +2 / +3
Query: 173 VVSSRQWPLISRYRASVHTQSARLEMMSSLFKPRGTDDDGLIR 301
VVSS WP ISRYRASV T S R+E++ SLFKP+G +D GLIR
Sbjct: 87 VVSSLGWPCISRYRASVCTLSPRVEIIDSLFKPQGNEDRGLIR 215
Score = 50.1 bits (103), Expect(3) = 2e-012
Identities = 22/42 (52%), Positives = 29/42 (69%)
Frame = -2 / -1
Query: 270 GLNNEDIISSLADWVCTDALYLEIRGH*RELTTAATEGLSCP 145
GLN E IIS+L D V T+ALYLE++G +ELTT + + P
Sbjct: 184 GLNRESIISTLGDRVHTEALYLEMQGQPKELTTLSVQKYKVP 59
Score = 41.8 bits (85), Expect(3) = 5e-023
Identities = 18/27 (66%), Positives = 20/27 (74%)
Frame = +2 / +2
Query: 362 FRDGVSESQFTQVINIELDQIIEACKF 442
FRDGVSE +F V+NIEL QIIE F
Sbjct: 500 FRDGVSEGEFKHVLNIELAQIIEVETF 580
Score = 40.0 bits (81), Expect(3) = 5e-023
Identities = 15/22 (68%), Positives = 18/22 (81%)
Frame = +2 / +3
Query: 302 ESLIDFYTSSGKRKPEHIIIFR 367
E L DFY SSGK++PE +IIFR
Sbjct: 312 ELLFDFYLSSGKQRPEQVIIFR 377
Score = 33.6 bits (67), Expect(3) = 2e-012
Identities = 14/23 (60%), Positives = 18/23 (78%)
Frame = -1 / -1
Query: 430 LDDLIQLNVDDLGKLTFTDSIPE 362
L+DL QLNV ++ KL T+SIPE
Sbjct: 568 LNDLCQLNVQNMLKLALTNSIPE 500
Score = 32.7 bits (65), Expect(3) = 1e-004
Identities = 16/33 (48%), Positives = 21/33 (63%)
Frame = -2 / -2
Query: 459 DHFSSRNLHASMI*SSSMLMTWVN*LSLTPSLK 361
+ + N+ SMI +SSM T +N SLTPSLK
Sbjct: 597 EQITGGNVSTSMICASSMFRTCLNSPSLTPSLK 499
Score = 29.9 bits (59), Expect(2) = 0.10
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = +1 / +1
Query: 361 FQGWSQ*KSVYPGHQH*AGSDHRG 432
FQGWS * V +H*AG+DH G
Sbjct: 499 FQGWS**GRV*ACSEH*AGTDH*G 570
Score = 29.9 bits (59), Expect(2) = 0.64
Identities = 15/25 (60%), Positives = 18/25 (72%)
Frame = -3 / -3
Query: 437 YMPR*SDPAQC**PG*TDFH*LHP* 363
++P+*S PAQC *T H*LHP*
Sbjct: 575 FLPQ*SVPAQCSEHA*TRPH*LHP* 501
Score = 29.0 bits (57), Expect(2) = 0.64
Identities = 14/23 (60%), Positives = 15/23 (65%)
Frame = +3 / +3
Query: 363 SGMESVKVSLPRSSTLSWIRSSR 431
SGME V+ SL TLSW RS R
Sbjct: 501 SGMELVRASLSMF*TLSWHRSLR 569
Score = 28.6 bits (56), Expect(3) = 2e-012
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = -1 / -3
Query: 367 PENNYVFWFSLSRASVEV 314
PEN+ +FW L+RA VE+
Sbjct: 377 PENDDLFWSLLTRAKVEI 324
Score = 26.3 bits (51), Expect(2) = 0.10
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +1 / +2
Query: 319 LH*LWKAKTRTHNYFQ 366
L *LW AKTRT ++FQ
Sbjct: 329 LP*LW*AKTRTSHHFQ 376
Score = 25.8 bits (50), Expect(3) = 1e-004
Identities = 17/42 (40%), Positives = 20/42 (47%)
Frame = -3 / -2
Query: 296 *GHHHQYPAA*TTRTSFLVWQIGCALMLYI*R*EAIDEN*PP 171
*GH ++P A*T W I C L I R +A N* P
Sbjct: 210 *GHGLRFPEA*TGNQ*SPPWVIECTRKLCIWRCKANPRN*QP 85
Score = 24.4 bits (47), Expect(2) = 0.64
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +3 / +1
Query: 318 STLALESENQNT*LFSGM 371
STLAL S++QN FSG+
Sbjct: 328 STLALVSKDQNKSSFSGL 381
Score = 24.0 bits (46), Expect(3) = 1e-004
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -2 / -1
Query: 369 SLKIIMCSGFRFPELV*K 316
+LK++ CSG PEL *K
Sbjct: 379 NLKMMTCSGLCLPELR*K 326
Score = 23.5 bits (45), Expect(2) = 0.64
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = -3 / -2
Query: 374 LHP*K*LCVLVFAFQS*CRSRSV 306
L *K* VLVFA+QS* R++ +
Sbjct: 384 LQT*K**LVLVFAYQS*GRNQII 316
>gb|BZ336052.1|BZ336052 hz28d11.b1 WGS-SbicolorF (JM107 adapted methyl filtered) Sorghum
bicolor genomic clone hz28d11 5', DNA sequence
Length = 688
Score = 54.2 bits (112), Expect(4) = 7e-023
Identities = 18/25 (72%), Positives = 22/25 (88%)
Frame = +2 / -3
Query: 542 GTVVDSKVCHPKNFDFYMCAHAGMI 616
GTVVD+ +CHP+ +DFYMCAHAG I
Sbjct: 275 GTVVDTGICHPRYYDFYMCAHAGRI 201
Score = 51.0 bits (105), Expect(4) = 7e-023
Identities = 18/27 (66%), Positives = 22/27 (81%)
Frame = +2 / -1
Query: 449 EKWSPKFTVIVAQKNHHTKFFQTASPD 529
+ W PKFTVIVAQKNHHT+FF+ + D
Sbjct: 448 DTWLPKFTVIVAQKNHHTRFFRDGNND 368
Score = 46.9 bits (96), Expect(3) = 3e-014
Identities = 20/34 (58%), Positives = 25/34 (73%)
Frame = -2 / +1
Query: 615 IIPACAHM*KSKFLGWQTLLSTTVPGRTLSGDAV 514
I+PA AHM*KS +LGWQ +STTVP R L + +
Sbjct: 202 ILPA*AHM*KS*YLGWQIPVSTTVPARGLQDEDI 303
Score = 37.3 bits (75), Expect(3) = 3e-014
Identities = 16/21 (76%), Positives = 16/21 (76%)
Frame = -2 / +3
Query: 510 KNLVWWFF*ATITVNLGDHFS 448
KNLV WFF ATITVNLG S
Sbjct: 387 KNLV*WFFCATITVNLGSQVS 449
Score = 36.8 bits (74), Expect(4) = 7e-023
Identities = 16/25 (64%), Positives = 18/25 (72%)
Frame = +2 / -2
Query: 368 DGVSESQFTQVINIELDQIIEACKF 442
DGVSE +F V+NIEL QIIE F
Sbjct: 621 DGVSEGEFKHVLNIELAQIIEVETF 547
Score = 33.1 bits (66), Expect(2) = 3e-004
Identities = 10/15 (66%), Positives = 13/15 (86%)
Frame = +1 / -3
Query: 463 QVHCDCCSKEPPHQV 507
QVH DCC++EP H+V
Sbjct: 434 QVHSDCCAEEPSHKV 390
Score = 32.2 bits (64), Expect(3) = 3e-014
Identities = 14/24 (58%), Positives = 18/24 (75%)
Frame = -1 / +1
Query: 430 LDDLIQLNVDDLGKLTFTDSIPEN 359
L+DL QLNV ++ KL T+SIP N
Sbjct: 559 LNDLCQLNVQNMLKLALTNSIP*N 630
Score = 31.8 bits (63), Expect(2) = 3e-004
Identities = 15/25 (60%), Positives = 16/25 (64%)
Frame = +3 / -3
Query: 357 LFSGMESVKVSLPRSSTLSWIRSSR 431
LF GME V+ SL TLSW RS R
Sbjct: 632 LFQGMELVRASLSMF*TLSWHRSLR 558
Score = 30.9 bits (61), Expect(3) = 2e-004
Identities = 16/30 (53%), Positives = 20/30 (66%)
Frame = -3 / +3
Query: 437 YMPR*SDPAQC**PG*TDFH*LHP*K*LCV 348
++P+*S PAQC *T H*LHP K* +
Sbjct: 552 FLPQ*SVPAQCSEHA*TRPH*LHPLK*TII 641
Score = 29.5 bits (58), Expect(2) = 0.26
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = -2 / +2
Query: 459 DHFSSRNLHASMI*SSSMLMTWVN*LSLTPSLKI 358
+ + N+ SMI +SSM T +N SLTPS +I
Sbjct: 530 EQITGGNVSTSMICASSMFRTCLNSPSLTPSPEI 631
Score = 27.2 bits (53), Expect(3) = 2e-004
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = -1 / +2
Query: 499 VVVLLSNNHSELG*P 455
V+VLL NNH ELG P
Sbjct: 398 VMVLLRNNHCELGEP 442
Score = 25.4 bits (49), Expect(2) = 0.26
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = -3 / +1
Query: 509 RTWCGGSFEQQSQ*TW 462
+T C GS QQS *TW
Sbjct: 388 KTLCDGSSAQQSL*TW 435
Score = 23.5 bits (45), Expect(4) = 7e-023
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = +2 / -3
Query: 596 CAHAGMIGTTRPTHY 640
CA GTTRP HY
Sbjct: 50 CACVISQGTTRPAHY 6
Score = 23.5 bits (45), Expect(3) = 2e-004
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = -1 / +3
Query: 616 NHPSMCTHVEVEVLRMANFTIHHSS 542
N + THVE+ V +A+ +H+S+
Sbjct: 201 NPAGVSTHVEIIVSGVADSRVHNST 275
>gb|CW484158.1|CW484158 fsbb001f246c16f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f246c16, DNA
sequence
Length = 402
Score = 95.0 bits (201), Expect(2) = 1e-022
Identities = 33/68 (48%), Positives = 50/68 (73%)
Frame = +2 / +1
Query: 512 QTASPDNVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFSADEMQEF 691
Q NV PGTVVD+ V P +DFY+C+H G++GT+RPTHY+ L DE GF +D++Q+
Sbjct: 121 QQTKTGNVPPGTVVDTGVADPSAYDFYLCSHTGLLGTSRPTHYYSLVDEHGFGSDDLQKL 300
Query: 692 VHSLSYVY 715
+++L +V+
Sbjct: 301 IYNLCFVF 324
Score = 51.5 bits (106), Expect = 1e-005
Identities = 29/51 (56%), Positives = 31/51 (60%)
Frame = -2 / -2
Query: 684 CISSAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPGRT 532
C SS KP SS R ** VGL+VP P H *KS G T +STTVPG T
Sbjct: 293 CRSSDPKPCSSTRL**CVGLLVPRSPVWLHR*KSYADGSATPVSTTVPGGT 141
Score = 38.2 bits (77), Expect = 0.14
Identities = 17/56 (30%), Positives = 33/56 (58%)
Frame = -1 / -1
Query: 697 MNKLLHLVCRETYLVVQNMIVGGPCCSNHPSMCTHVEVEVLRMANFTIHHSSRKNI 530
+++LL +V E LV Q ++V P P + VEV R+++ ++HH +R+++
Sbjct: 306 VDQLLQVVRPEAVLVHQAVVVCRPARP*KPGVAAQVEVVCRRVSHTSVHHRARRHV 139
Score = 32.7 bits (65), Expect(2) = 1e-022
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +2 / +1
Query: 455 WSPKFTVIVAQKNHHTKFF 511
++P TVIVA+K HHT+ F
Sbjct: 46 YAPTITVIVAKKRHHTRLF 102
>gb|CW190349.1|CW190349 104_612_11174456_116_36836_032 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11174456, DNA
sequence
Length = 643
Score = 94.5 bits (200), Expect(2) = 2e-022
Identities = 33/68 (48%), Positives = 50/68 (73%)
Frame = +2 / +3
Query: 512 QTASPDNVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFSADEMQEF 691
Q NV PGTVVD+ V P +DFY+C+H G++GT+RPTHY+ L DE GF +D++Q+
Sbjct: 123 QQTKTGNVPPGTVVDTGVVDPSAYDFYLCSHTGLLGTSRPTHYYSLVDEHGFGSDDLQKL 302
Query: 692 VHSLSYVY 715
+++L +V+
Sbjct: 303 IYNLCFVF 326
Score = 51.5 bits (106), Expect = 1e-005
Identities = 29/51 (56%), Positives = 31/51 (60%)
Frame = -2 / -1
Query: 684 CISSAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPGRT 532
C SS KP SS R ** VGL+VP P H *KS G T +STTVPG T
Sbjct: 295 CRSSDPKPCSSTRL**CVGLLVPRSPVWLHR*KSYADGSTTPVSTTVPGGT 143
Score = 36.8 bits (74), Expect = 0.36
Identities = 17/56 (30%), Positives = 32/56 (57%)
Frame = -1 / -3
Query: 697 MNKLLHLVCRETYLVVQNMIVGGPCCSNHPSMCTHVEVEVLRMANFTIHHSSRKNI 530
+++LL +V E LV Q ++V P P + VEV R+ + ++HH +R+++
Sbjct: 308 VDQLLQVVRPEAVLVHQAVVVCRPARP*KPGVAAQVEVVCRRVNHTSVHHRARRHV 141
Score = 32.7 bits (65), Expect(2) = 2e-022
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +2 / +3
Query: 455 WSPKFTVIVAQKNHHTKFF 511
++P TVIVA+K HHT+ F
Sbjct: 48 YAPTITVIVAKKRHHTRLF 104
>gb|BE593115.1|BE593115 WS1_97_F09.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 599
Score = 105 bits (223), Expect = 1e-021
Identities = 38/60 (63%), Positives = 47/60 (78%)
Frame = +2 / +1
Query: 536 LPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFSADEMQEFVHSLSYVY 715
LPGTVVDSK+CHP FDFY+C+HAG+ GT+RP HYHVL DE F+AD +Q ++L Y Y
Sbjct: 1 LPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADGLQTLTNNLCYTY 180
Score = 55.1 bits (114), Expect = 1e-006
Identities = 27/49 (55%), Positives = 30/49 (61%)
Frame = -2 / -1
Query: 684 CISSAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPG 538
C SA SS RT**W G +VP +PA *KS +GWQ STTVPG
Sbjct: 149 CNPSAVNLFSSHRT**WAGRLVP*MPAWLQR*KSNSVGWQIFESTTVPG 3
Score = 44.6 bits (91), Expect = 0.002
Identities = 18/41 (43%), Positives = 28/41 (68%)
Frame = -1 / -3
Query: 658 LVVQNMIVGGPCCSNHPSMCTHVEVEVLRMANFTIHHSSRK 536
L+ Q+MI+G CS + SM T VE++ MA+ +HHS+R+
Sbjct: 123 LIPQDMIMGRAACSLNASMATEVEIKFSWMADL*VHHSTRQ 1
Score = 34.1 bits (68), Expect = 2.4
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = -3 / -2
Query: 644 HDSGWALLFQSSQHVHTCRSRSS*DGKLYYPPQFQ 540
HD+G LF QH + R++ DG+ PPQ+Q
Sbjct: 109 HDNGQGGLFPECQHGYRGRNQIQLDGRSLSPPQYQ 5
Score = 34.1 bits (68), Expect = 2.4
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = +1 / +3
Query: 538 SWNCGG**SLPS*ELRLLHVCTCWDDWNNKAHPLSC 645
+W CGG LPS + L + CW N PLSC
Sbjct: 3 AWYCGGLKDLPSN*I*FLPL*PCWHSGNKPPCPLSC 110
>gb|CF485311.1|CF485311 POL1_30_F05.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_30_F05_A002 5', mRNA sequence
Length = 689
Score = 95.0 bits (201), Expect(2) = 3e-021
Identities = 41/61 (67%), Positives = 47/61 (77%)
Frame = +2 / +3
Query: 2 YLLNLLMKINAKLGGLNSLLQVEASSSIPHVSQVPTIILGMDVSHGHPGQDRPSVAAVVS 181
YL N+L+KINAKLGG+NSLLQ+E S +IP VS+VPTIILGMDVSHG PG A V
Sbjct: 450 YLTNVLLKINAKLGGMNSLLQIETSPAIPQVSKVPTIILGMDVSHGSPGHSDVPSIAAVV 629
Query: 182 S 184
S
Sbjct: 630 S 632
Score = 73.5 bits (154), Expect(2) = 1e-021
Identities = 34/59 (57%), Positives = 36/59 (61%)
Frame = -2 / -2
Query: 177 TTAATEGLSCPG*PCETSIPKMMVGTCDTCGIDEDASTCSNEFRPPSFALIFISKLSRY 1
T A CPG P ETSIPK++VGT DT GI D S SNEF PPSFA IF RY
Sbjct: 625 TAAMDGTSECPGEPWETSIPKIIVGTLDT*GIAGDVSIWSNEFMPPSFAFIFSRTFVRY 449
Score = 56.1 bits (116), Expect(2) = 1e-013
Identities = 23/28 (82%), Positives = 25/28 (89%)
Frame = +2 / +3
Query: 152 DRPSVAAVVSSRQWPLISRYRASVHTQS 235
D PS+AAVVSSR+WPLIS YRASV TQS
Sbjct: 603 DVPSIAAVVSSREWPLISEYRASVRTQS 686
Score = 50.6 bits (104), Expect(2) = 1e-021
Identities = 21/28 (75%), Positives = 23/28 (82%)
Frame = -2 / -2
Query: 234 DWVCTDALYLEIRGH*RELTTAATEGLS 151
DWV T+ALY EIRGH RELTTAA +G S
Sbjct: 685 DWVRTEALYSEIRGHSRELTTAAMDGTS 602
Score = 41.4 bits (84), Expect(2) = 1e-013
Identities = 15/39 (38%), Positives = 25/39 (64%)
Frame = +1 / +2
Query: 22 EDQCKAWWSELVAAS*SIFVNTTCVASTHHHLRYGCFTW 138
+D+CKA W E VA +*+I N++ + +++L GC W
Sbjct: 470 KDKCKAGWHEFVAPN*NIPSNSSSIQGPNYNLGNGCLPW 586
Score = 34.5 bits (69), Expect(2) = 1e-004
Identities = 16/27 (59%), Positives = 17/27 (62%)
Frame = -1 / -1
Query: 232 LGVH*CSISRDKRPLTRTNHRCNRRSI 152
LG SI RDKRP TRTN+ N R I
Sbjct: 683 LGADRSSIFRDKRPFTRTNNSSNGRYI 603
Score = 32.2 bits (64), Expect(2) = 1e-004
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = -1 / -1
Query: 73 CFNLQQRVQTTKLCIDL 23
CFNL+QR+ T+LCI L
Sbjct: 521 CFNLEQRIHATQLCIYL 471
Score = 29.9 bits (59), Expect(2) = 0.47
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = +3 / +1
Query: 21 *RSMQSLVV*TRCCKLKHLRQY 86
*R MQS V * RC KLKH +Q+
Sbjct: 469 *R*MQSWVA*IRCSKLKHPQQF 534
Score = 29.9 bits (59), Expect(2) = 0.63
Identities = 16/27 (59%), Positives = 17/27 (62%)
Frame = -3 / -3
Query: 233 IGCALMLYI*R*EAIDEN*PPLQPKVY 153
IGC LYI R*EAI EN* Q V+
Sbjct: 684 IGCGQKLYIPR*EAIHEN*QQQQWTVH 604
Score = 28.1 bits (55), Expect(2) = 3e-021
Identities = 13/19 (68%), Positives = 14/19 (73%)
Frame = +3 / +1
Query: 177 LVLVNGLLSLDIEHQCTPN 233
LVLVNGLLS +IE PN
Sbjct: 628 LVLVNGLLSRNIELLSAPN 684
Score = 24.0 bits (46), Expect(2) = 0.47
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = +1 / +2
Query: 190 MASYL*I*SISAHPI 234
MASYL I*S HPI
Sbjct: 641 MASYLGI*SFCPHPI 685
Score = 23.5 bits (45), Expect(2) = 0.63
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = -3 / -3
Query: 83 LTKMLQLAATSSDHQALH 30
L M Q AT+S H ALH
Sbjct: 531 LLGMFQFGATNSCHPALH 478
>gb|CW089146.1|CW089146 104_434_10948530_115_32585_073 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10948530, DNA
sequence
Length = 742
Score = 52.4 bits (108), Expect(3) = 2e-020
Identities = 16/24 (66%), Positives = 21/24 (87%)
Frame = +2 / +2
Query: 542 GTVVDSKVCHPKNFDFYMCAHAGM 613
GTVVD ++CHP FDFY+C+HAG+
Sbjct: 299 GTVVDQQICHPTEFDFYLCSHAGI 370
Score = 50.1 bits (103), Expect(3) = 2e-020
Identities = 18/31 (58%), Positives = 24/31 (77%)
Frame = +2 / +3
Query: 617 GTTRPTHYHVLHDEIGFSADEMQEFVHSLSY 709
GT+RPTHYHVL+DE F+AD +Q ++L Y
Sbjct: 453 GTSRPTHYHVLYDENHFTADALQSLTNNLCY 545
Score = 38.2 bits (77), Expect(3) = 2e-020
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +2 / +2
Query: 422 IIEACKFLDEKWSPKFTVIVAQKNHHTKFF 511
+ +AC L+E + P T +V QK HHT+ F
Sbjct: 59 LFKACASLEEGYLPPVTFVVVQKRHHTRLF 148
Score = 34.5 bits (69), Expect(2) = 0.001
Identities = 15/24 (62%), Positives = 16/24 (66%)
Frame = -2 / -2
Query: 612 IPACAHM*KSKFLGWQTLLSTTVP 541
IPA H *KS +GWQ STTVP
Sbjct: 369 IPA*LHK*KSNSVGWQICWSTTVP 298
Score = 32.2 bits (64), Expect = 8.7
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = -1 / -1
Query: 607 SMCTHVEVEVLRMANFTIHHSS 542
SM T VE+++ RMAN ++HSS
Sbjct: 364 SMTTQVEIKLSRMANLLVNHSS 299
Score = 29.5 bits (58), Expect(2) = 2.1
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = +3 / +3
Query: 543 ELWWIVKFAILRTSTSTCVHML 608
ELW +FAIL + STCV ML
Sbjct: 300 ELWLTNRFAILLSLISTCVVML 365
Score = 28.6 bits (56), Expect(2) = 0.001
Identities = 8/23 (34%), Positives = 16/23 (69%)
Frame = -1 / -3
Query: 685 LHLVCRETYLVVQNMIVGGPCCS 617
L + + L++++M++GGP CS
Sbjct: 521 LQCISSKMILIIEDMVMGGPTCS 453
Score = 22.1 bits (42), Expect(2) = 2.1
Identities = 8/18 (44%), Positives = 9/18 (50%)
Frame = +1 / +2
Query: 619 NNKAHPLSCSARRDRFLC 672
N AHPL C + F C
Sbjct: 455 NKSAHPLPCPL**ESFYC 508
>gb|CW135737.1|CW135737 104_520_11118005_116_34836_023 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11118005, DNA
sequence
Length = 710
Score = 100 bits (214), Expect = 2e-020
Identities = 36/62 (58%), Positives = 47/62 (75%)
Frame = +2 / -3
Query: 530 NVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFSADEMQEFVHSLSY 709
NV PGTVVD+ + HP+ FDFY+C+H G GT+RPTHY VL DE F +DEMQ+ +H+L Y
Sbjct: 525 NVPPGTVVDTVITHPREFDFYLCSHWGTKGTSRPTHYRVLWDENNFKSDEMQQLIHNLCY 346
Query: 710 VY 715
+
Sbjct: 345 TF 340
Score = 52.4 bits (108), Expect = 7e-006
Identities = 28/51 (54%), Positives = 32/51 (62%)
Frame = -2 / +2
Query: 684 CISSAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPGRT 532
CISS K SS T * VGL+VP++P H *KS LG +STTVPG T
Sbjct: 371 CISSDLKLFSSHSTR*CVGLLVPLVPQ*LHR*KSNSLGCVITVSTTVPGGT 523
>gb|BG463628.1|BG463628 EM1_50_A05.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 611
Score = 98.2 bits (208), Expect = 1e-019
Identities = 35/56 (62%), Positives = 44/56 (78%)
Frame = +2 / +1
Query: 548 VVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFSADEMQEFVHSLSYVY 715
VVDSK+CHP FDFY+C+HAG+ GT+RP HYHVL DE F+ADE+Q ++L Y Y
Sbjct: 1 VVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADELQTLTNNLCYTY 168
Score = 44.1 bits (90), Expect = 0.002
Identities = 24/45 (53%), Positives = 27/45 (60%)
Frame = -2 / -1
Query: 684 CISSAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLST 550
C SSA SS RT * G +VP +PA H *KS +GWQ L ST
Sbjct: 137 CSSSAVNLFSSHRTW**AGRLVP*MPAWLHR*KSNSVGWQILEST 3
Score = 41.4 bits (84), Expect = 0.015
Identities = 17/46 (36%), Positives = 27/46 (58%)
Frame = -1 / -3
Query: 685 LHLVCRETYLVVQNMIVGGPCCSNHPSMCTHVEVEVLRMANFTIHH 548
L L+ + L+ Q+M++ CS + M T VE++ RMAN I+H
Sbjct: 138 LQLISCKLVLIPQDMVMSRAACSLNAGMATQVEIKFRRMANLGINH 1
Score = 32.2 bits (64), Expect = 8.7
Identities = 17/37 (45%), Positives = 18/37 (48%)
Frame = +3 / +2
Query: 549 WWIVKFAILRTSTSTCVHMLG*LEQQGPPTIMFCTTR 659
W I +FAILR STCV M EQ M C R
Sbjct: 2 WLIPRFAILRNLISTCVAMPAFREQAALLITMSCGMR 112
>gb|CW231166.1|CW231166 104_680_11210980_116_37342_010 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11210980, DNA
sequence
Length = 712
Score = 96.8 bits (205), Expect = 3e-019
Identities = 34/58 (58%), Positives = 45/58 (77%)
Frame = +2 / +1
Query: 536 LPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFSADEMQEFVHSLSY 709
+ GTVVDSK+CHP FDF++C+HAG+ GT+RP HYHVL DE F+AD +Q ++L Y
Sbjct: 31 IAGTVVDSKICHPTEFDFFLCSHAGIKGTSRPAHYHVLWDENNFTADALQTLTNNLCY 204
Score = 49.2 bits (101), Expect = 7e-005
Identities = 24/48 (50%), Positives = 30/48 (62%)
Frame = -2 / -3
Query: 684 CISSAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVP 541
C +SA K SS +T * G +VP++PA H KS +GWQ STTVP
Sbjct: 179 CNASAVKLFSSHKTW**AGRLVPLMPAWLHRKKSNSVGWQIFESTTVP 36
>gb|BG412718.1|BG412718 OV2_33_H08.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 588
Score = 95.0 bits (201), Expect = 1e-018
Identities = 41/61 (67%), Positives = 47/61 (77%)
Frame = +2 / +3
Query: 2 YLLNLLMKINAKLGGLNSLLQVEASSSIPHVSQVPTIILGMDVSHGHPGQDRPSVAAVVS 181
YL N+L+KINAKLGG+NSLLQ+E S +IP VS+VPTIILGMDVSHG PG A V
Sbjct: 390 YLTNVLLKINAKLGGMNSLLQIETSPAIPQVSKVPTIILGMDVSHGSPGHSDVPSIAAVV 569
Query: 182 S 184
S
Sbjct: 570 S 572
Score = 73.5 bits (154), Expect = 3e-012
Identities = 34/59 (57%), Positives = 36/59 (61%)
Frame = -2 / -3
Query: 177 TTAATEGLSCPG*PCETSIPKMMVGTCDTCGIDEDASTCSNEFRPPSFALIFISKLSRY 1
T A CPG P ETSIPK++VGT DT GI D S SNEF PPSFA IF RY
Sbjct: 565 TAAMDGTSECPGEPWETSIPKIIVGTLDT*GIAGDVSIWSNEFMPPSFAFIFSRTFVRY 389
Score = 41.4 bits (84), Expect(2) = 5e-007
Identities = 15/39 (38%), Positives = 25/39 (64%)
Frame = +1 / +2
Query: 22 EDQCKAWWSELVAAS*SIFVNTTCVASTHHHLRYGCFTW 138
+D+CKA W E VA +*+I N++ + +++L GC W
Sbjct: 410 KDKCKAGWHEFVAPN*NIPSNSSSIQGPNYNLGNGCLPW 526
Score = 33.1 bits (66), Expect(2) = 5e-007
Identities = 12/15 (80%), Positives = 14/15 (93%)
Frame = +2 / +3
Query: 152 DRPSVAAVVSSRQWP 196
D PS+AAVVSSR+WP
Sbjct: 543 DVPSIAAVVSSREWP 587
Score = 32.2 bits (64), Expect(2) = 0.017
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = -1 / -2
Query: 73 CFNLQQRVQTTKLCIDL 23
CFNL+QR+ T+LCI L
Sbjct: 461 CFNLEQRIHATQLCIYL 411
Score = 26.7 bits (52), Expect(2) = 0.017
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = -2 / -3
Query: 195 GH*RELTTAATEGLS 151
GH RELTTAA +G S
Sbjct: 586 GHSRELTTAAMDGTS 542
>gb|BE595663.1|BE595663 PI1_55_A07.g1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 403
Score = 94.5 bits (200), Expect = 2e-018
Identities = 35/58 (60%), Positives = 44/58 (75%)
Frame = +2 / +3
Query: 542 GTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFSADEMQEFVHSLSYVY 715
GTVVDSK+ HP FDFY+C+HAG+ GT+RP HYHVL DE F+AD +Q ++L Y Y
Sbjct: 3 GTVVDSKIGHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADGLQTLTNNLCYTY 176
Score = 49.6 bits (102), Expect = 5e-005
Identities = 25/48 (52%), Positives = 28/48 (58%)
Frame = -2 / -1
Query: 684 CISSAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVP 541
C SA SS RT**W G +VP +PA *KS +GW STTVP
Sbjct: 145 CNPSAVNLFSSHRT**WAGRLVP*MPAWLQR*KSNSVGWPIFESTTVP 2
Score = 41.8 bits (85), Expect = 0.011
Identities = 17/39 (43%), Positives = 26/39 (66%)
Frame = -1 / -3
Query: 658 LVVQNMIVGGPCCSNHPSMCTHVEVEVLRMANFTIHHSS 542
L+ Q+MI+G CS + SM T VE++ MA+ +HHS+
Sbjct: 119 LIPQDMIMGRAACSLNASMATEVEIKFSWMADL*VHHST 3
Score = 34.1 bits (68), Expect = 2.4
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = -3 / -2
Query: 644 HDSGWALLFQSSQHVHTCRSRSS*DGKLYYPPQFQ 540
HD+G LF QH + R++ DG+ PPQ+Q
Sbjct: 105 HDNGQGGLFPECQHGYRGRNQIQLDGRSLSPPQYQ 1
>gb|BG052653.1|BG052653 RHIZ2_27_F12.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 634
Score = 93.2 bits (197), Expect = 4e-018
Identities = 33/40 (82%), Positives = 38/40 (95%)
Frame = +2 / +1
Query: 596 CAHAGMIGTTRPTHYHVLHDEIGFSADEMQEFVHSLSYVY 715
C+HAGMIGTTRPTHYH+LHDEIGF+ D++QE VHSLSYVY
Sbjct: 1 CSHAGMIGTTRPTHYHILHDEIGFNPDDLQELVHSLSYVY 120
Score = 63.8 bits (133), Expect = 3e-009
Identities = 30/38 (78%), Positives = 32/38 (84%)
Frame = -2 / -3
Query: 714 YT*DSE*TNSCISSAEKPISSCRT**WVGLVVPIIPAC 601
YT*+SE T+SC SS KPISSCR ** VGLVVPIIPAC
Sbjct: 119 YT*ESECTSSCRSSGLKPISSCRI***VGLVVPIIPAC 6
Score = 46.9 bits (96), Expect = 3e-004
Identities = 20/40 (50%), Positives = 28/40 (70%)
Frame = -1 / -2
Query: 715 VHVR*RMNKLLHLVCRETYLVVQNMIVGGPCCSNHPSMCT 596
VHVR RM++LL ++ E YL++QNMI+ P +H SM T
Sbjct: 120 VHVRERMHQLLQIIRIEAYLIMQNMIMSWPRSPDHSSMRT 1
Score = 35.4 bits (71), Expect = 0.94
Identities = 19/39 (48%), Positives = 22/39 (56%)
Frame = +3 / +2
Query: 597 VHMLG*LEQQGPPTIMFCTTR*VSLQTRCRSLFIRYLTC 713
V ML * +G I+FC R* S+ CRS IR LTC
Sbjct: 2 VRMLE*SGLRGQLIIIFCMMR*ASILMICRSWCIRSLTC 118
Score = 33.6 bits (67), Expect = 3.3
Identities = 17/37 (45%), Positives = 23/37 (62%)
Frame = +1 / +3
Query: 604 CWDDWNNKAHPLSCSARRDRFLCRRDAGVCSFAILRV 714
CW+D + +A+ LS SA DR AG +FA+LRV
Sbjct: 9 CWNDRDYEANSLSYSA**DRLQS**SAGAGAFALLRV 119
>gb|BG241626.1|BG241626 RHIZ2_17_H06.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 602
Score = 93.2 bits (197), Expect = 4e-018
Identities = 33/40 (82%), Positives = 38/40 (95%)
Frame = +2 / +3
Query: 596 CAHAGMIGTTRPTHYHVLHDEIGFSADEMQEFVHSLSYVY 715
C+HAGMIGTTRPTHYH+LHDEIGF+ D++QE VHSLSYVY
Sbjct: 3 CSHAGMIGTTRPTHYHILHDEIGFNPDDLQELVHSLSYVY 122
Score = 67.0 bits (140), Expect = 3e-010
Identities = 31/40 (77%), Positives = 33/40 (82%)
Frame = -2 / -2
Query: 714 YT*DSE*TNSCISSAEKPISSCRT**WVGLVVPIIPACAH 595
YT*+SE T+SC SS KPISSCR ** VGLVVPIIPAC H
Sbjct: 121 YT*ESECTSSCRSSGLKPISSCRI***VGLVVPIIPACEH 2
Score = 46.9 bits (96), Expect = 3e-004
Identities = 20/40 (50%), Positives = 28/40 (70%)
Frame = -1 / -1
Query: 715 VHVR*RMNKLLHLVCRETYLVVQNMIVGGPCCSNHPSMCT 596
VHVR RM++LL ++ E YL++QNMI+ P +H SM T
Sbjct: 122 VHVRERMHQLLQIIRIEAYLIMQNMIMSWPRSPDHSSMRT 3
Score = 39.6 bits (80), Expect = 0.054
Identities = 20/40 (50%), Positives = 23/40 (57%)
Frame = +3 / +1
Query: 594 CVHMLG*LEQQGPPTIMFCTTR*VSLQTRCRSLFIRYLTC 713
CV ML * +G I+FC R* S+ CRS IR LTC
Sbjct: 1 CVRMLE*SGLRGQLIIIFCMMR*ASILMICRSWCIRSLTC 120
Score = 34.5 bits (69), Expect = 1.8
Identities = 18/40 (45%), Positives = 24/40 (60%)
Frame = +1 / +2
Query: 595 VCTCWDDWNNKAHPLSCSARRDRFLCRRDAGVCSFAILRV 714
V CW+D + +A+ LS SA DR AG +FA+LRV
Sbjct: 2 VFACWNDRDYEANSLSYSA**DRLQS**SAGAGAFALLRV 121
Score = 33.1 bits (66), Expect = 4.6
Identities = 17/40 (42%), Positives = 22/40 (55%)
Frame = -3 / -3
Query: 713 TRKIANEQTPASRLQRNLSRRAEHDSGWALLFQSSQHVHT 594
TRK AN PA +LS AE+D+ A +S QH +T
Sbjct: 120 TRKRANAPAPADHQD*SLSHHAEYDNELAS*SRSFQHANT 1
>gb|CW409275.1|CW409275 fsbb001f103i06k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f103i06, DNA
sequence
Length = 597
Score = 47.8 bits (98), Expect(3) = 2e-017
Identities = 20/31 (64%), Positives = 25/31 (80%)
Frame = +2 / +3
Query: 209 YRASVHTQSARLEMMSSLFKPRGTDDDGLIR 301
YRASV T S R+E++ SLFKP+G +D GLIR
Sbjct: 3 YRASVCTLSPRVEIIDSLFKPQGNEDRGLIR 95
Score = 41.8 bits (85), Expect(3) = 2e-017
Identities = 18/27 (66%), Positives = 20/27 (74%)
Frame = +2 / +2
Query: 362 FRDGVSESQFTQVINIELDQIIEACKF 442
FRDGVSE +F V+NIEL QIIE F
Sbjct: 380 FRDGVSEGEFKHVLNIELAQIIEVETF 460
Score = 40.0 bits (81), Expect(3) = 2e-017
Identities = 15/22 (68%), Positives = 18/22 (81%)
Frame = +2 / +3
Query: 302 ESLIDFYTSSGKRKPEHIIIFR 367
E L DFY SSGK++PE +IIFR
Sbjct: 192 ELLFDFYLSSGKQRPEQVIIFR 257
Score = 33.6 bits (67), Expect(3) = 3e-007
Identities = 14/23 (60%), Positives = 18/23 (78%)
Frame = -1 / -3
Query: 430 LDDLIQLNVDDLGKLTFTDSIPE 362
L+DL QLNV ++ KL T+SIPE
Sbjct: 448 LNDLCQLNVQNMLKLALTNSIPE 380
Score = 32.7 bits (65), Expect(2) = 0.078
Identities = 16/33 (48%), Positives = 21/33 (63%)
Frame = -2 / -1
Query: 459 DHFSSRNLHASMI*SSSMLMTWVN*LSLTPSLK 361
+ + N+ SMI +SSM T +N SLTPSLK
Sbjct: 477 EQITGGNVSTSMICASSMFRTCLNSPSLTPSLK 379
Score = 32.2 bits (64), Expect(3) = 3e-007
Identities = 14/21 (66%), Positives = 16/21 (76%)
Frame = -2 / -3
Query: 270 GLNNEDIISSLADWVCTDALY 208
GLN E IIS+L D V T+ALY
Sbjct: 64 GLNRESIISTLGDRVHTEALY 2
Score = 29.9 bits (59), Expect(2) = 0.11
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = +1 / +1
Query: 361 FQGWSQ*KSVYPGHQH*AGSDHRG 432
FQGWS * V +H*AG+DH G
Sbjct: 379 FQGWS**GRV*ACSEH*AGTDH*G 450
Score = 29.9 bits (59), Expect(2) = 0.64
Identities = 15/25 (60%), Positives = 18/25 (72%)
Frame = -3 / -2
Query: 437 YMPR*SDPAQC**PG*TDFH*LHP* 363
++P+*S PAQC *T H*LHP*
Sbjct: 455 FLPQ*SVPAQCSEHA*TRPH*LHP* 381
Score = 29.0 bits (57), Expect(2) = 0.64
Identities = 14/23 (60%), Positives = 15/23 (65%)
Frame = +3 / +3
Query: 363 SGMESVKVSLPRSSTLSWIRSSR 431
SGME V+ SL TLSW RS R
Sbjct: 381 SGMELVRASLSMF*TLSWHRSLR 449
Score = 28.6 bits (56), Expect(3) = 3e-007
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = -1 / -2
Query: 367 PENNYVFWFSLSRASVEV 314
PEN+ +FW L+RA VE+
Sbjct: 257 PENDDLFWSLLTRAKVEI 204
Score = 26.3 bits (51), Expect(2) = 0.11
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +1 / +2
Query: 319 LH*LWKAKTRTHNYFQ 366
L *LW AKTRT ++FQ
Sbjct: 209 LP*LW*AKTRTSHHFQ 256
Score = 24.4 bits (47), Expect(2) = 0.64
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +3 / +1
Query: 318 STLALESENQNT*LFSGM 371
STLAL S++QN FSG+
Sbjct: 208 STLALVSKDQNKSSFSGL 261
Score = 24.0 bits (46), Expect(2) = 0.078
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -2 / -3
Query: 369 SLKIIMCSGFRFPELV*K 316
+LK++ CSG PEL *K
Sbjct: 259 NLKMMTCSGLCLPELR*K 206
Score = 23.5 bits (45), Expect(2) = 0.64
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = -3 / -1
Query: 374 LHP*K*LCVLVFAFQS*CRSRSV 306
L *K* VLVFA+QS* R++ +
Sbjct: 264 LQT*K**LVLVFAYQS*GRNQII 196
>gb|BF177091.1|BF177091 EM1_3_E09.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 619
Score = 90.0 bits (190), Expect = 4e-017
Identities = 31/52 (59%), Positives = 40/52 (76%)
Frame = +2 / +3
Query: 560 KVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFSADEMQEFVHSLSYVY 715
K+CHP FDFY+C+HAG+ GT+RP HYHVL DE F+ADE+Q ++L Y Y
Sbjct: 3 KICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADELQTLTNNLCYTY 158
Score = 41.4 bits (84), Expect = 0.015
Identities = 22/42 (52%), Positives = 25/42 (59%)
Frame = -2 / -1
Query: 684 CISSAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTL 559
C SSA SS RT * G +VP +PA H *KS +GWQ L
Sbjct: 127 CSSSAVNLFSSHRTW**AGRLVP*MPAWLHR*KSNSVGWQIL 2
Score = 36.3 bits (73), Expect = 0.50
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = -1 / -3
Query: 685 LHLVCRETYLVVQNMIVGGPCCSNHPSMCTHVEVEVLRMAN 563
L L+ + L+ Q+M++ CS + M T VE++ RMAN
Sbjct: 128 LQLISCKLVLIPQDMVMSRAACSLNAGMATQVEIKFRRMAN 6
>gb|CW099174.1|CW099174 104_466_11003407_148_34378_032 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11003407, DNA
sequence
Length = 711
Score = 57.9 bits (120), Expect(2) = 6e-017
Identities = 19/27 (70%), Positives = 24/27 (88%)
Frame = +2 / -1
Query: 533 VLPGTVVDSKVCHPKNFDFYMCAHAGM 613
+L GTVVDSK+CHP FDFY+C+HAG+
Sbjct: 330 LLKGTVVDSKICHPTEFDFYLCSHAGI 250
Score = 50.6 bits (104), Expect(2) = 6e-017
Identities = 19/31 (61%), Positives = 23/31 (74%)
Frame = +2 / -1
Query: 617 GTTRPTHYHVLHDEIGFSADEMQEFVHSLSY 709
GT+RP HYHVL DE FSADE+Q ++L Y
Sbjct: 153 GTSRPAHYHVLWDENNFSADELQTLTNNLCY 61
Score = 29.9 bits (59), Expect(2) = 0.042
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = -2 / +2
Query: 627 LVVPIIPACAHM*KSKFLGWQTLLSTTVP 541
+V ++PA H *KS +G Q STTVP
Sbjct: 236 MVCTLMPAWLHK*KSNSVG*QIFESTTVP 322
Score = 27.6 bits (54), Expect(2) = 0.042
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = -2 / +2
Query: 684 CISSAEKPISSCRT**WVGLVVPII 610
C SSAEK SS +T** G +VP I
Sbjct: 86 CNSSAEKLFSSHKT***AGRLVPYI 160
>gb|CW182991.1|CW182991 104_598_11164376_116_36666_020 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11164376, DNA
sequence
Length = 633
Score = 57.9 bits (120), Expect(2) = 6e-017
Identities = 19/27 (70%), Positives = 24/27 (88%)
Frame = +2 / +1
Query: 533 VLPGTVVDSKVCHPKNFDFYMCAHAGM 613
+L GTVVDSK+CHP FDFY+C+HAG+
Sbjct: 37 LLKGTVVDSKICHPTEFDFYLCSHAGI 117
Score = 50.6 bits (104), Expect(2) = 6e-017
Identities = 19/31 (61%), Positives = 23/31 (74%)
Frame = +2 / +1
Query: 617 GTTRPTHYHVLHDEIGFSADEMQEFVHSLSY 709
GT+RP HYHVL DE FSADE+Q ++L Y
Sbjct: 214 GTSRPAHYHVLWDENNFSADELQTLTNNLCY 306
Score = 29.9 bits (59), Expect(2) = 0.042
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = -2 / -2
Query: 627 LVVPIIPACAHM*KSKFLGWQTLLSTTVP 541
+V ++PA H *KS +G Q STTVP
Sbjct: 131 MVCTLMPAWLHK*KSNSVG*QIFESTTVP 45
Score = 27.6 bits (54), Expect(2) = 0.042
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = -2 / -2
Query: 684 CISSAEKPISSCRT**WVGLVVPII 610
C SSAEK SS +T** G +VP I
Sbjct: 281 CNSSAEKLFSSHKT***AGRLVPYI 207
>gb|BM328689.1|BM328689 PIC1_25_D06.g1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 631
Score = 89.0 bits (188), Expect = 7e-017
Identities = 32/39 (82%), Positives = 37/39 (94%)
Frame = +2 / +1
Query: 599 AHAGMIGTTRPTHYHVLHDEIGFSADEMQEFVHSLSYVY 715
+HAGMIGTTRPTHYH+LHDEIGF+ D++QE VHSLSYVY
Sbjct: 1 SHAGMIGTTRPTHYHILHDEIGFNPDDLQELVHSLSYVY 117
Score = 61.1 bits (127), Expect = 2e-008
Identities = 29/38 (76%), Positives = 31/38 (81%)
Frame = -2 / -3
Query: 714 YT*DSE*TNSCISSAEKPISSCRT**WVGLVVPIIPAC 601
YT*+SE T+SC SS KPISSC ** VGLVVPIIPAC
Sbjct: 116 YT*ESECTSSCRSSGLKPISSCSI***VGLVVPIIPAC 3
Score = 42.3 bits (86), Expect = 0.008
Identities = 18/38 (47%), Positives = 26/38 (68%)
Frame = -1 / -2
Query: 715 VHVR*RMNKLLHLVCRETYLVVQNMIVGGPCCSNHPSM 602
VHVR RM++LL ++ E YL++Q MI+ P +H SM
Sbjct: 117 VHVRERMHQLLQIIRIEAYLIMQYMIMSWPRSPDHSSM 4
Score = 35.9 bits (72), Expect = 0.68
Identities = 18/38 (47%), Positives = 22/38 (57%)
Frame = +3 / +2
Query: 600 HMLG*LEQQGPPTIMFCTTR*VSLQTRCRSLFIRYLTC 713
HML * +G I++C R* S+ CRS IR LTC
Sbjct: 2 HMLE*SGLRGQLIIIYCMMR*ASILMICRSWCIRSLTC 115
Score = 34.5 bits (69), Expect = 1.8
Identities = 17/38 (44%), Positives = 24/38 (63%)
Frame = +1 / +3
Query: 601 TCWDDWNNKAHPLSCSARRDRFLCRRDAGVCSFAILRV 714
TCW+D + +A+ LS +A DR AG +FA+LRV
Sbjct: 3 TCWNDRDYEANSLSYTA**DRLQS**SAGAGAFALLRV 116
>gb|BG933514.1|BG933514 WS1_4_C11.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA, mRNA
sequence
Length = 508
Score = 71.2 bits (149), Expect(2) = 2e-016
Identities = 31/63 (49%), Positives = 40/63 (63%)
Frame = +2 / +1
Query: 2 YLLNLLMKINAKLGGLNSLLQVEASSSIPHVSQVPTIILGMDVSHGHPGQDRPSVAAVVS 181
YL N+ +KIN K+GG N++L + IP VS VPTII G DV+H HPG+D A V
Sbjct: 109 YLANVALKINVKVGGRNTVLVDALTRRIPLVSDVPTIIFGADVTHPHPGEDSSPSIAAVV 288
Query: 182 SRQ 190
+ Q
Sbjct: 289 ASQ 297
Score = 46.0 bits (94), Expect = 6e-004
Identities = 17/37 (45%), Positives = 26/37 (70%)
Frame = +2 / +1
Query: 158 PSVAAVVSSRQWPLISRYRASVHTQSARLEMMSSLFK 268
PS+AAVV+S+ WP +++Y V Q+ R E++ LFK
Sbjct: 268 PSIAAVVASQDWPEVTKYAGLVSAQTHRQELIQDLFK 378
Score = 46.0 bits (94), Expect(2) = 1e-006
Identities = 23/51 (45%), Positives = 30/51 (58%)
Frame = -2 / -3
Query: 153 SCPG*PCETSIPKMMVGTCDTCGIDEDASTCSNEFRPPSFALIFISKLSRY 1
S PG TS PK++VGT T GI ++ S FRPP+F IF + +RY
Sbjct: 260 SSPGWGWVTSAPKIIVGTSLTRGILLVKASTSTVFRPPTFTFIFRATFARY 108
Score = 35.4 bits (71), Expect(2) = 2e-016
Identities = 18/56 (32%), Positives = 27/56 (48%)
Frame = +2 / +1
Query: 215 ASVHTQSARLEMMSSLFKPRGTDDDGLIRESLIDFYTSSGKRKPEHIIIFRDGVSE 382
A H Q ++ P+ G + L+ + S K+KP+ II +RDGVSE
Sbjct: 337 AQTHRQELIQDLFKVYQDPQRGSVSGGMVRELLISFWRSTKQKPKRIIFYRDGVSE 504
Score = 27.2 bits (53), Expect(2) = 1e-006
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -1 / -2
Query: 232 LGVH*CSISRDKRPLTRTNHRCNRRS 155
L H* I + RP+ R+N+ CN R+
Sbjct: 342 LSTH*SCILGNLRPVLRSNNSCNGRT 265
>gb|CW178747.1|CW178747 104_592_11159733_116_36617_085 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11159733, DNA
sequence
Length = 692
Score = 57.0 bits (118), Expect(3) = 4e-016
Identities = 18/27 (66%), Positives = 24/27 (88%)
Frame = +2 / +1
Query: 533 VLPGTVVDSKVCHPKNFDFYMCAHAGM 613
VL GTVVD+K+CHP FDFY+C+H+G+
Sbjct: 448 VLSGTVVDTKICHPSEFDFYLCSHSGI 528
Score = 38.2 bits (77), Expect(3) = 4e-016
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +2 / +2
Query: 431 ACKFLDEKWSPKFTVIVAQKNHHTKFF 511
AC L E + P+ T +V QK HHT+ F
Sbjct: 209 ACASLQEGYQPRVTFVVVQKRHHTRLF 289
Score = 35.4 bits (71), Expect(2) = 0.062
Identities = 16/27 (59%), Positives = 17/27 (62%)
Frame = -2 / -1
Query: 612 IPACAHM*KSKFLGWQTLLSTTVPGRT 532
IP *KS LGWQ +STTVP RT
Sbjct: 527 IPE*LQR*KSNSLGWQIFVSTTVPERT 447
Score = 30.4 bits (60), Expect(3) = 4e-016
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +2 / +2
Query: 368 DGVSESQFTQVINIELDQI 424
DGVSE QF+QV+ E+D I
Sbjct: 56 DGVSEGQFSQVLLYEMDAI 112
Score = 23.5 bits (45), Expect(2) = 0.062
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = -2 / -3
Query: 399 TWVN*LSLTPSLK 361
TW+N SLTPSL+
Sbjct: 87 TWLNCPSLTPSLQ 49
>gb|CW168693.1|CW168693 104_578_11154280_148_36605_058 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11154280, DNA
sequence
Length = 692
Score = 85.8 bits (181), Expect = 6e-016
Identities = 34/40 (85%), Positives = 35/40 (87%)
Frame = +2 / +2
Query: 593 MCAHAGMIGTTRPTHYHVLHDEIGFSADEMQEFVHSLSYV 712
+CA GTTRPTHYHVLHDEIGFSADEMQEFVHSLSYV
Sbjct: 56 VCACCSYQGTTRPTHYHVLHDEIGFSADEMQEFVHSLSYV 175
Score = 74.8 bits (157), Expect = 1e-012
Identities = 34/40 (85%), Positives = 35/40 (87%)
Frame = -2 / -3
Query: 714 YT*DSE*TNSCISSAEKPISSCRT**WVGLVVPIIPACAH 595
YT*+SE*TNSCISSAEKPISSCRT**WVGLVVP AH
Sbjct: 177 YT*ESE*TNSCISSAEKPISSCRT**WVGLVVP*YEQQAH 58
Score = 67.0 bits (140), Expect = 3e-010
Identities = 25/33 (75%), Positives = 29/33 (87%)
Frame = -1 / -2
Query: 715 VHVR*RMNKLLHLVCRETYLVVQNMIVGGPCCS 617
+H+R RMNKLLH V RETYL+VQNMI+G PCCS
Sbjct: 178 LHIRERMNKLLHFVSRETYLIVQNMIMGRPCCS 80
Score = 62.5 bits (130), Expect = 7e-009
Identities = 27/40 (67%), Positives = 30/40 (75%)
Frame = +1 / +1
Query: 595 VCTCWDDWNNKAHPLSCSARRDRFLCRRDAGVCSFAILRV 714
+C NNKA PLSCSAR DRFLC R+AGVCSFA+L V
Sbjct: 58 MCLLLVSGNNKADPLSCSAR*DRFLC*RNAGVCSFALLCV 177
Score = 59.3 bits (123), Expect = 6e-008
Identities = 26/39 (66%), Positives = 28/39 (71%)
Frame = -3 / -1
Query: 713 TRKIANEQTPASRLQRNLSRRAEHDSGWALLFQSSQHVH 597
T K ANEQTPA R QRNLS RAEHD+G ALLF + H
Sbjct: 176 THKRANEQTPAFRQQRNLSHRAEHDNGSALLFPDTSSKH 60
Score = 59.3 bits (123), Expect = 6e-008
Identities = 25/32 (78%), Positives = 26/32 (81%)
Frame = +3 / +3
Query: 618 EQQGPPTIMFCTTR*VSLQTRCRSLFIRYLTC 713
EQQG P IMFCT R*VSL T+CRSLFIR L C
Sbjct: 81 EQQGRPIIMFCTMR*VSLLTKCRSLFIRSLMC 176
>gb|CW382183.1|CW382183 fsbb001f063p06k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f063p06, DNA
sequence
Length = 429
Score = 85.8 bits (181), Expect = 6e-016
Identities = 34/40 (85%), Positives = 35/40 (87%)
Frame = +2 / +2
Query: 593 MCAHAGMIGTTRPTHYHVLHDEIGFSADEMQEFVHSLSYV 712
+CA GTTRPTHYHVLHDEIGFSADEMQEFVHSLSYV
Sbjct: 68 VCACCSYQGTTRPTHYHVLHDEIGFSADEMQEFVHSLSYV 187
Score = 74.8 bits (157), Expect = 1e-012
Identities = 34/40 (85%), Positives = 35/40 (87%)
Frame = -2 / -1
Query: 714 YT*DSE*TNSCISSAEKPISSCRT**WVGLVVPIIPACAH 595
YT*+SE*TNSCISSAEKPISSCRT**WVGLVVP AH
Sbjct: 189 YT*ESE*TNSCISSAEKPISSCRT**WVGLVVP*YEQQAH 70
Score = 67.0 bits (140), Expect = 3e-010
Identities = 25/33 (75%), Positives = 29/33 (87%)
Frame = -1 / -3
Query: 715 VHVR*RMNKLLHLVCRETYLVVQNMIVGGPCCS 617
+H+R RMNKLLH V RETYL+VQNMI+G PCCS
Sbjct: 190 LHIRERMNKLLHFVSRETYLIVQNMIMGRPCCS 92
Score = 62.5 bits (130), Expect = 7e-009
Identities = 27/40 (67%), Positives = 30/40 (75%)
Frame = +1 / +1
Query: 595 VCTCWDDWNNKAHPLSCSARRDRFLCRRDAGVCSFAILRV 714
+C NNKA PLSCSAR DRFLC R+AGVCSFA+L V
Sbjct: 70 MCLLLVSGNNKADPLSCSAR*DRFLC*RNAGVCSFALLCV 189
Score = 59.3 bits (123), Expect = 6e-008
Identities = 26/39 (66%), Positives = 28/39 (71%)
Frame = -3 / -2
Query: 713 TRKIANEQTPASRLQRNLSRRAEHDSGWALLFQSSQHVH 597
T K ANEQTPA R QRNLS RAEHD+G ALLF + H
Sbjct: 188 THKRANEQTPAFRQQRNLSHRAEHDNGSALLFPDTSSKH 72
Score = 59.3 bits (123), Expect = 6e-008
Identities = 25/32 (78%), Positives = 26/32 (81%)
Frame = +3 / +3
Query: 618 EQQGPPTIMFCTTR*VSLQTRCRSLFIRYLTC 713
EQQG P IMFCT R*VSL T+CRSLFIR L C
Sbjct: 93 EQQGRPIIMFCTMR*VSLLTKCRSLFIRSLMC 188
>gb|CW330844.1|CW330844 104_827_11480592_116_36010_082 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11480592, DNA
sequence
Length = 739
Score = 56.1 bits (116), Expect(2) = 9e-016
Identities = 18/24 (75%), Positives = 22/24 (91%)
Frame = +2 / +1
Query: 542 GTVVDSKVCHPKNFDFYMCAHAGM 613
GTVVDSK+CHP FDFY+C+HAG+
Sbjct: 58 GTVVDSKICHPTEFDFYLCSHAGI 129
Score = 48.3 bits (99), Expect(2) = 9e-016
Identities = 18/31 (58%), Positives = 23/31 (74%)
Frame = +2 / +3
Query: 617 GTTRPTHYHVLHDEIGFSADEMQEFVHSLSY 709
GT+RP HYHVL DE F+ADE+Q ++L Y
Sbjct: 213 GTSRPAHYHVLWDENKFTADELQTLTNNLCY 305
Score = 35.9 bits (72), Expect = 0.68
Identities = 15/24 (62%), Positives = 17/24 (70%)
Frame = -2 / -3
Query: 612 IPACAHM*KSKFLGWQTLLSTTVP 541
+PA H *KS +GWQ L STTVP
Sbjct: 128 MPAWLHR*KSNSVGWQILESTTVP 57
>gb|CL148074.1|CL148074 104_327_10592836_116_31781_344 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10592836, DNA
sequence
Length = 711
Score = 56.1 bits (116), Expect(2) = 9e-016
Identities = 18/24 (75%), Positives = 22/24 (91%)
Frame = +2 / +2
Query: 542 GTVVDSKVCHPKNFDFYMCAHAGM 613
GTVVDSK+CHP FDFY+C+HAG+
Sbjct: 161 GTVVDSKICHPTEFDFYLCSHAGI 232
Score = 48.3 bits (99), Expect(2) = 9e-016
Identities = 18/31 (58%), Positives = 23/31 (74%)
Frame = +2 / +1
Query: 617 GTTRPTHYHVLHDEIGFSADEMQEFVHSLSY 709
GT+RP HYHVL DE F+ADE+Q ++L Y
Sbjct: 316 GTSRPAHYHVLWDENKFTADELQTLTNNLCY 408
Score = 35.9 bits (72), Expect = 0.68
Identities = 15/24 (62%), Positives = 17/24 (70%)
Frame = -2 / -1
Query: 612 IPACAHM*KSKFLGWQTLLSTTVP 541
+PA H *KS +GWQ L STTVP
Sbjct: 231 MPAWLHR*KSNSVGWQILESTTVP 160
>gb|CW157762.1|CW157762 104_561_11147696_148_36393_028 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11147696, DNA
sequence
Length = 711
Score = 56.1 bits (116), Expect(2) = 9e-016
Identities = 18/24 (75%), Positives = 22/24 (91%)
Frame = +2 / +3
Query: 542 GTVVDSKVCHPKNFDFYMCAHAGM 613
GTVVDSK+CHP FDFY+C+HAG+
Sbjct: 18 GTVVDSKICHPTEFDFYLCSHAGI 89
Score = 48.3 bits (99), Expect(2) = 9e-016
Identities = 18/31 (58%), Positives = 23/31 (74%)
Frame = +2 / +2
Query: 617 GTTRPTHYHVLHDEIGFSADEMQEFVHSLSY 709
GT+RP HYHVL DE F+ADE+Q ++L Y
Sbjct: 173 GTSRPAHYHVLWDENKFTADELQTLTNNLCY 265
Score = 35.9 bits (72), Expect = 0.68
Identities = 15/24 (62%), Positives = 17/24 (70%)
Frame = -2 / -3
Query: 612 IPACAHM*KSKFLGWQTLLSTTVP 541
+PA H *KS +GWQ L STTVP
Sbjct: 88 MPAWLHR*KSNSVGWQILESTTVP 17
>gb|CW135738.1|CW135738 104_520_11118005_148_34832_023 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11118005, DNA
sequence
Length = 659
Score = 39.1 bits (79), Expect(4) = 2e-015
Identities = 17/43 (39%), Positives = 25/43 (58%)
Frame = +2 / +2
Query: 308 LIDFYTSSGKRKPEHIIIFRDGVSESQFTQVINIELDQIIEAC 436
L++ + + P II FRDGVSE+ F +V+ EL + AC
Sbjct: 374 LLEEFVKEVGKLPSRIIFFRDGVSETLFYKVLTEELQAVRLAC 502
Score = 36.8 bits (74), Expect(4) = 2e-015
Identities = 21/60 (35%), Positives = 28/60 (46%)
Frame = +2 / +2
Query: 2 YLLNLLMKINAKLGGLNSLLQVEASSSIPHVSQVPTIILGMDVSHGHPGQDRPSVAAVVS 181
+L NL +KINAK+GG N L IP V ++ M HP S +VV+
Sbjct: 86 FLANLALKINAKVGGSNVALYNSLPCQIPRVFSDKEPVMFMGADVTHPHPLDDSSPSVVA 265
Score = 35.9 bits (72), Expect(4) = 2e-015
Identities = 14/35 (40%), Positives = 23/35 (65%)
Frame = +2 / +2
Query: 158 PSVAAVVSSRQWPLISRYRASVHTQSARLEMMSSL 262
PSV AVV+S WP ++Y + + +Q+ R E++ L
Sbjct: 251 PSVVAVVASMNWPSANKYISRMRSQTHRKEIIERL 355
Score = 25.4 bits (49), Expect(2) = 9.3
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +2 / +2
Query: 104 PTIILGMDVSHGHPGQD 154
P + +G DV+H HP D
Sbjct: 194 PVMFMGADVTHPHPLDD 244
Score = 24.9 bits (48), Expect(4) = 2e-015
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +2 / +2
Query: 530 NVLPGTVVDSKVCH 571
NV PGTVVD+ + H
Sbjct: 617 NVPPGTVVDTVITH 658
Score = 24.0 bits (46), Expect(2) = 9.3
Identities = 5/10 (50%), Positives = 8/10 (80%)
Frame = +1 / +1
Query: 22 EDQCKAWWSE 51
ED+C+ WW +
Sbjct: 106 EDKCEGWWKQ 135
>gb|BZ366524.1|BZ366524 ic97f02.g1 WGS-SbicolorF (JM107 adapted methyl filtered) Sorghum
bicolor genomic clone ic97f02 5', DNA sequence
Length = 722
Score = 52.4 bits (108), Expect(2) = 3e-015
Identities = 16/24 (66%), Positives = 21/24 (87%)
Frame = +2 / -2
Query: 542 GTVVDSKVCHPKNFDFYMCAHAGM 613
GTVVD ++CHP FDFY+C+HAG+
Sbjct: 658 GTVVDQQICHPTEFDFYLCSHAGI 587
Score = 50.1 bits (103), Expect(2) = 3e-015
Identities = 18/31 (58%), Positives = 24/31 (77%)
Frame = +2 / -3
Query: 617 GTTRPTHYHVLHDEIGFSADEMQEFVHSLSY 709
GT+RPTHYHVL+DE F+AD +Q ++L Y
Sbjct: 504 GTSRPTHYHVLYDENHFTADALQSLTNNLCY 412
Score = 34.5 bits (69), Expect(2) = 0.001
Identities = 15/24 (62%), Positives = 16/24 (66%)
Frame = -2 / +3
Query: 612 IPACAHM*KSKFLGWQTLLSTTVP 541
IPA H *KS +GWQ STTVP
Sbjct: 588 IPA*LHK*KSNSVGWQICWSTTVP 659
Score = 32.2 bits (64), Expect = 8.7
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = -1 / +2
Query: 607 SMCTHVEVEVLRMANFTIHHSS 542
SM T VE+++ RMAN ++HSS
Sbjct: 593 SMTTQVEIKLSRMANLLVNHSS 658
Score = 29.5 bits (58), Expect(2) = 2.1
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = +3 / -3
Query: 543 ELWWIVKFAILRTSTSTCVHML 608
ELW +FAIL + STCV ML
Sbjct: 657 ELWLTNRFAILLSLISTCVVML 592
Score = 28.6 bits (56), Expect(2) = 0.001
Identities = 8/23 (34%), Positives = 16/23 (69%)
Frame = -1 / +1
Query: 685 LHLVCRETYLVVQNMIVGGPCCS 617
L + + L++++M++GGP CS
Sbjct: 436 LQCISSKMILIIEDMVMGGPTCS 504
Score = 22.1 bits (42), Expect(2) = 2.1
Identities = 8/18 (44%), Positives = 9/18 (50%)
Frame = +1 / -2
Query: 619 NNKAHPLSCSARRDRFLC 672
N AHPL C + F C
Sbjct: 502 NKSAHPLPCPL**ESFYC 449
>gb|BF656550.1|BF656550 FM1_51_D09.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 548
Score = 82.6 bits (174), Expect = 6e-015
Identities = 28/49 (57%), Positives = 37/49 (75%)
Frame = +2 / +2
Query: 569 HPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFSADEMQEFVHSLSYVY 715
HP+ FDFY+C+H G GT+RPTHY VL DE F +DEMQ+ +H+L Y +
Sbjct: 5 HPREFDFYLCSHWGTKGTSRPTHYRVLWDENNFKSDEMQQLIHNLCYTF 151
Score = 39.1 bits (79), Expect = 0.074
Identities = 21/38 (55%), Positives = 24/38 (63%)
Frame = -2 / -3
Query: 684 CISSAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLG 571
CISS K SS T * VGL+VP++P H *KS LG
Sbjct: 120 CISSDLKLFSSHSTR*CVGLLVPLVPQ*LHR*KSNSLG 7
>gb|CW205365.1|CW205365 104_633_11187029_116_36925_019 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11187029, DNA
sequence
Length = 667
Score = 50.1 bits (103), Expect(2) = 4e-014
Identities = 15/24 (62%), Positives = 20/24 (83%)
Frame = +2 / -2
Query: 542 GTVVDSKVCHPKNFDFYMCAHAGM 613
GTVVD +CHP FDF++C+HAG+
Sbjct: 609 GTVVDKSICHPTEFDFFLCSHAGI 538
Score = 48.7 bits (100), Expect(2) = 4e-014
Identities = 17/32 (53%), Positives = 24/32 (75%)
Frame = +2 / -2
Query: 617 GTTRPTHYHVLHDEIGFSADEMQEFVHSLSYV 712
GT+RPTHYHVL D+ F+AD +Q ++L Y+
Sbjct: 453 GTSRPTHYHVLRDDNKFTADALQSLTYNLCYL 358
Score = 39.6 bits (80), Expect(2) = 0.013
Identities = 16/28 (57%), Positives = 19/28 (67%)
Frame = -2 / +2
Query: 615 IIPACAHM*KSKFLGWQTLLSTTVPGRT 532
+IPA H KS +GWQ LLSTTVP +
Sbjct: 536 LIPAWLHRKKSNSVGWQILLSTTVPANS 619
Score = 21.7 bits (41), Expect(2) = 0.013
Identities = 7/23 (30%), Positives = 13/23 (56%)
Frame = -1 / +1
Query: 685 LHLVCRETYLVVQNMIVGGPCCS 617
L +C E ++ Q+M++ CS
Sbjct: 385 LQSICSELIVISQHMVMRRTACS 453
>gb|BF481845.1|BF481845 FM1_22_B03.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 550
Score = 78.5 bits (165), Expect = 1e-013
Identities = 30/30 (100%), Positives = 30/30 (100%)
Frame = +2 / +1
Query: 626 RPTHYHVLHDEIGFSADEMQEFVHSLSYVY 715
RPTHYHVLHDEIGFSADEMQEFVHSLSYVY
Sbjct: 1 RPTHYHVLHDEIGFSADEMQEFVHSLSYVY 90
Score = 65.2 bits (136), Expect = 1e-009
Identities = 28/29 (96%), Positives = 29/29 (100%)
Frame = -2 / -3
Query: 714 YT*DSE*TNSCISSAEKPISSCRT**WVG 628
YT*+SE*TNSCISSAEKPISSCRT**WVG
Sbjct: 89 YT*ESE*TNSCISSAEKPISSCRT**WVG 3
Score = 57.9 bits (120), Expect = 2e-007
Identities = 22/30 (73%), Positives = 26/30 (86%)
Frame = -1 / -2
Query: 715 VHVR*RMNKLLHLVCRETYLVVQNMIVGGP 626
+H+R RMNKLLH V RETYL+VQNMI+G P
Sbjct: 90 IHIRERMNKLLHFVSRETYLIVQNMIMGRP 1
Score = 54.2 bits (112), Expect = 2e-006
Identities = 23/29 (79%), Positives = 25/29 (86%)
Frame = +1 / +3
Query: 628 AHPLSCSARRDRFLCRRDAGVCSFAILRV 714
A PLSCSAR DRFLC R+AGVCSFA+L V
Sbjct: 3 ADPLSCSAR*DRFLC*RNAGVCSFALLCV 89
Score = 52.4 bits (108), Expect = 7e-006
Identities = 22/29 (75%), Positives = 23/29 (79%)
Frame = +3 / +2
Query: 627 GPPTIMFCTTR*VSLQTRCRSLFIRYLTC 713
G P IMFCT R*VSL T+CRSLFIR L C
Sbjct: 2 GRPIIMFCTMR*VSLLTKCRSLFIRSLMC 88
Score = 50.6 bits (104), Expect = 3e-005
Identities = 22/29 (75%), Positives = 23/29 (79%)
Frame = -3 / -1
Query: 713 TRKIANEQTPASRLQRNLSRRAEHDSGWA 627
T K ANEQTPA R QRNLS RAEHD+G A
Sbjct: 88 THKRANEQTPAFRQQRNLSHRAEHDNGSA 2
>gb|CF485335.1|CF485335 POL1_30_H08.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_30_H08_A002 5', mRNA sequence
Length = 641
Score = 46.4 bits (95), Expect(3) = 2e-013
Identities = 20/50 (40%), Positives = 32/50 (64%)
Frame = +2 / +2
Query: 296 IRESLIDFYTSSGKRKPEHIIIFRDGVSESQFTQVINIELDQIIEACKFL 445
I + L+ + K++P+ +I +RDGVSE QF QV+ E+ +I +A K L
Sbjct: 455 IVKELLLAFQERSKQRPKQLIFYRDGVSEGQFKQVLEQEIPEIEKAWKAL 604
Score = 37.7 bits (76), Expect(3) = 2e-013
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +2 / +2
Query: 158 PSVAAVVSSRQWPLISRYRASVHTQSARLEMMSSL 262
PS+A+VV S+ WP ++ Y Q R E++ L
Sbjct: 344 PSIASVVGSQDWPTVANYNGIARAQGHRKELIDGL 448
Score = 29.0 bits (57), Expect(3) = 2e-013
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +2 / +2
Query: 80 SIPHVSQVPTIILGMDVSH 136
S+P VS PTII G DV+H
Sbjct: 263 SLPVVSIEPTIIFGADVTH 319
Score = 26.7 bits (52), Expect(2) = 3.8
Identities = 9/20 (45%), Positives = 16/20 (80%)
Frame = -2 / -3
Query: 60 SNEFRPPSFALIFISKLSRY 1
+++F PP+ ALI I+ L++Y
Sbjct: 246 NSKFLPPNLALILIATLAKY 187
Score = 25.8 bits (50), Expect(2) = 3.8
Identities = 16/34 (47%), Positives = 17/34 (50%)
Frame = -2 / -3
Query: 444 RNLHASMI*SSSMLMTWVN*LSLTPSLKIIMCSG 343
R HA I S T +N SLTPSL I C G
Sbjct: 603 RAFHAFSISGISCSSTCLNWPSLTPSL*KISCLG 502
>gb|CW411648.1|CW411648 fsbb001f106o17k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f106o17, DNA
sequence
Length = 773
Score = 63.8 bits (133), Expect(2) = 4e-013
Identities = 24/51 (47%), Positives = 35/51 (68%)
Frame = +2 / -1
Query: 359 IFRDGVSESQFTQVINIELDQIIEACKFLDEKWSPKFTVIVAQKNHHTKFF 511
+FRDGVSE QF+ V+ E+D I +AC +++ + P T +V QK HHT+ F
Sbjct: 353 LFRDGVSEGQFSHVLLHEMDAIRKACASMEDGYLPPVTFVVVQKRHHTRLF 201
Score = 39.1 bits (79), Expect = 0.074
Identities = 23/49 (46%), Positives = 26/49 (53%)
Frame = -2 / +1
Query: 510 KNLVWWFF*ATITVNLGDHFSSRNLHASMI*SSSMLMTWVN*LSLTPSL 364
K+LVW F T V G SS A +I S S TW+N SLTPSL
Sbjct: 202 KSLVWCLFCTTTNVTGGR*PSSIEAQAFLIASISWSKTWLNCPSLTPSL 348
Score = 33.6 bits (67), Expect(2) = 4e-013
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +2 / -2
Query: 173 VVSSRQWPLISRYRASVHTQSARLEMMSSLF 265
VV+S WP + Y+A V Q+ R E++ +LF
Sbjct: 718 VVASMDWPQVPTYKALVSAQAHREEIIQNLF 626
>gb|BG557100.1|BG557100 EM1_42_F06.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 543
Score = 76.2 bits (160), Expect = 5e-013
Identities = 29/29 (100%), Positives = 29/29 (100%)
Frame = +2 / +1
Query: 629 PTHYHVLHDEIGFSADEMQEFVHSLSYVY 715
PTHYHVLHDEIGFSADEMQEFVHSLSYVY
Sbjct: 1 PTHYHVLHDEIGFSADEMQEFVHSLSYVY 87
Score = 62.5 bits (130), Expect = 7e-009
Identities = 27/28 (96%), Positives = 28/28 (100%)
Frame = -2 / -2
Query: 714 YT*DSE*TNSCISSAEKPISSCRT**WV 631
YT*+SE*TNSCISSAEKPISSCRT**WV
Sbjct: 86 YT*ESE*TNSCISSAEKPISSCRT**WV 3
Score = 55.6 bits (115), Expect = 8e-007
Identities = 21/28 (75%), Positives = 25/28 (89%)
Frame = -1 / -1
Query: 715 VHVR*RMNKLLHLVCRETYLVVQNMIVG 632
+H+R RMNKLLH V RETYL+VQNMI+G
Sbjct: 87 IHIRERMNKLLHFVSRETYLIVQNMIMG 4
Score = 52.8 bits (109), Expect = 5e-006
Identities = 22/27 (81%), Positives = 24/27 (88%)
Frame = +1 / +3
Query: 634 PLSCSARRDRFLCRRDAGVCSFAILRV 714
PLSCSAR DRFLC R+AGVCSFA+L V
Sbjct: 6 PLSCSAR*DRFLC*RNAGVCSFALLCV 86
Score = 50.6 bits (104), Expect = 3e-005
Identities = 21/27 (77%), Positives = 22/27 (81%)
Frame = +3 / +2
Query: 633 PTIMFCTTR*VSLQTRCRSLFIRYLTC 713
P IMFCT R*VSL T+CRSLFIR L C
Sbjct: 5 PIIMFCTMR*VSLLTKCRSLFIRSLMC 85
Score = 50.1 bits (103), Expect = 4e-005
Identities = 21/27 (77%), Positives = 22/27 (81%)
Frame = -3 / -3
Query: 713 TRKIANEQTPASRLQRNLSRRAEHDSG 633
T K ANEQTPA R QRNLS RAEHD+G
Sbjct: 85 THKRANEQTPAFRQQRNLSHRAEHDNG 5
>gb|BI351076.1|BI351076 IP1_69_E06.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 680
Score = 76.2 bits (160), Expect = 5e-013
Identities = 27/33 (81%), Positives = 31/33 (93%)
Frame = +2 / +2
Query: 617 GTTRPTHYHVLHDEIGFSADEMQEFVHSLSYVY 715
GTTRPTHYH+LHDEIGF+ D++QE VHSLSYVY
Sbjct: 68 GTTRPTHYHILHDEIGFNPDDLQELVHSLSYVY 166
Score = 48.3 bits (99), Expect = 1e-004
Identities = 24/33 (72%), Positives = 26/33 (78%)
Frame = -2 / -3
Query: 714 YT*DSE*TNSCISSAEKPISSCRT**WVGLVVP 616
YT*+SE T+SC SS KPISSC ** VGLVVP
Sbjct: 165 YT*ESECTSSCRSSGLKPISSCSI***VGLVVP 67
Score = 36.8 bits (74), Expect = 0.36
Identities = 15/30 (50%), Positives = 22/30 (73%)
Frame = -1 / -2
Query: 715 VHVR*RMNKLLHLVCRETYLVVQNMIVGGP 626
VHVR RM++LL ++ E YL++Q MI+ P
Sbjct: 166 VHVRERMHQLLQIIRIEAYLIMQYMIMSWP 77
>gb|CW030109.1|CW030109 104_258_10500065_116_30404 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10500065, DNA
sequence
Length = 849
Score = 38.2 bits (77), Expect(4) = 7e-013
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +2 / +3
Query: 422 IIEACKFLDEKWSPKFTVIVAQKNHHTKFF 511
+ +AC L+E + P T +V QK HHT+ F
Sbjct: 612 LFKACASLEEGYLPPVTFVVVQKRHHTRLF 701
Score = 34.5 bits (69), Expect(4) = 7e-013
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +2 / +1
Query: 173 VVSSRQWPLISRYRASVHTQSARLEMMSSLF 265
VV+S WP I++YR V Q R E++ LF
Sbjct: 91 VVASMDWPEITKYRGLVSAQPHRQEIIEDLF 183
Score = 31.8 bits (63), Expect(4) = 7e-013
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +2 / +3
Query: 359 IFRDGVSESQFTQVINIELDQI 424
++RDGVSE QF+ V+ E+D I
Sbjct: 459 LYRDGVSEGQFSHVLLHEMDAI 524
Score = 23.5 bits (45), Expect(4) = 7e-013
Identities = 9/26 (34%), Positives = 14/26 (53%)
Frame = +2 / +3
Query: 290 GLIRESLIDFYTSSGKRKPEHIIIFR 367
GL+ L+ + R+PE II +R
Sbjct: 306 GLVCRELLIAFRRKTNRRPERIIFYR 383
>gb|BZ347855.1|BZ347855 ho35g11.g1 WGS-SbicolorF (JM107 adapted methyl filtered) Sorghum
bicolor genomic clone ho35g11 5', DNA sequence
Length = 485
Score = 57.0 bits (118), Expect(2) = 1e-012
Identities = 18/27 (66%), Positives = 24/27 (88%)
Frame = +2 / -2
Query: 533 VLPGTVVDSKVCHPKNFDFYMCAHAGM 613
VL GTVVD+K+CHP FDFY+C+H+G+
Sbjct: 205 VLSGTVVDTKICHPSEFDFYLCSHSGI 125
Score = 38.2 bits (77), Expect(2) = 1e-012
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +2 / -3
Query: 431 ACKFLDEKWSPKFTVIVAQKNHHTKFF 511
AC L E + P+ T +V QK HHT+ F
Sbjct: 444 ACASLQEGYQPRVTFVVVQKRHHTRLF 364
Score = 35.4 bits (71), Expect = 0.94
Identities = 16/27 (59%), Positives = 17/27 (62%)
Frame = -2 / +3
Query: 612 IPACAHM*KSKFLGWQTLLSTTVPGRT 532
IP *KS LGWQ +STTVP RT
Sbjct: 126 IPE*LQR*KSNSLGWQIFVSTTVPERT 206
>gb|BZ336053.1|BZ336053 hz28d11.g1 WGS-SbicolorF (JM107 adapted methyl filtered) Sorghum
bicolor genomic clone hz28d11 5', DNA sequence
Length = 578
Score = 74.8 bits (157), Expect = 1e-012
Identities = 31/47 (65%), Positives = 39/47 (82%)
Frame = +2 / +3
Query: 35 KLGGLNSLLQVEASSSIPHVSQVPTIILGMDVSHGHPGQDRPSVAAV 175
+LGGLNSLL++E + +IP VS+VPTII GMDVSHG P + PS+AAV
Sbjct: 309 QLGGLNSLLEIERNQAIPIVSRVPTIIFGMDVSHGAPRSNVPSIAAV 449
Score = 58.8 bits (122), Expect = 9e-008
Identities = 27/48 (56%), Positives = 31/48 (64%)
Frame = -2 / -2
Query: 180 LTTAATEGLSCPG*PCETSIPKMMVGTCDTCGIDEDASTCSNEFRPPS 37
L TAA +G G PCETSIPK+MVGT DT G+ S +EF PPS
Sbjct: 454 LHTAAMDGTFDRGAPCETSIPKIMVGTLDTIGMAWFLSISKSEFNPPS 311
Score = 41.4 bits (84), Expect = 0.015
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +1 / +2
Query: 37 AWWSELVAAS*SIFVNTTCVASTHHHLRYGCFTW 138
AWW E +* ++ CV ++H+L YGCF W
Sbjct: 311 AWWVEFTFGN*KKPGHSYCVEGSYHYLWYGCFAW 412
Score = 38.6 bits (78), Expect = 0.10
Identities = 20/49 (40%), Positives = 28/49 (57%)
Frame = +3 / +1
Query: 36 SLVV*TRCCKLKHLRQYHMCRKYPPSS*VWMFHMVIQDKIDLRLQRWLV 182
SLV * KLK R + +CR + P S VWMF MV ++ L R+++
Sbjct: 310 SLVG*IHFWKLKETRPFLLCRGFLPLSLVWMFRMVHHGRMYHPLLRYVM 456
Score = 33.1 bits (66), Expect = 4.6
Identities = 17/46 (36%), Positives = 21/46 (45%)
Frame = -3 / -3
Query: 173 PLQPKVYLVLDDHVKHPYLR*WWVLATHVVLTKMLQLAATSSDHQA 36
P Q V+ + H KHPY R*W +T Q +S HQA
Sbjct: 447 PQQWMVHSTVVHHAKHPYQR*W*EPSTQ*EWPGFFQFPKVNSTHQA 310
>gb|CW051010.1|CW051010 104_291_10514996_114_30192 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10514996, DNA
sequence
Length = 433
Score = 74.8 bits (157), Expect = 1e-012
Identities = 31/47 (65%), Positives = 39/47 (82%)
Frame = +2 / +2
Query: 35 KLGGLNSLLQVEASSSIPHVSQVPTIILGMDVSHGHPGQDRPSVAAV 175
+LGGLNSLL++E + +IP VS+VPTII GMDVSHG P + PS+AAV
Sbjct: 170 QLGGLNSLLEIERNQAIPIVSRVPTIIFGMDVSHGAPRSNVPSIAAV 310
Score = 58.8 bits (122), Expect = 9e-008
Identities = 27/48 (56%), Positives = 31/48 (64%)
Frame = -2 / -2
Query: 180 LTTAATEGLSCPG*PCETSIPKMMVGTCDTCGIDEDASTCSNEFRPPS 37
L TAA +G G PCETSIPK+MVGT DT G+ S +EF PPS
Sbjct: 315 LHTAAMDGTFDRGAPCETSIPKIMVGTLDTIGMAWFLSISKSEFNPPS 172
Score = 41.4 bits (84), Expect = 0.015
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +1 / +1
Query: 37 AWWSELVAAS*SIFVNTTCVASTHHHLRYGCFTW 138
AWW E +* ++ CV ++H+L YGCF W
Sbjct: 172 AWWVEFTFGN*KKPGHSYCVEGSYHYLWYGCFAW 273
Score = 38.6 bits (78), Expect = 0.10
Identities = 20/49 (40%), Positives = 28/49 (57%)
Frame = +3 / +3
Query: 36 SLVV*TRCCKLKHLRQYHMCRKYPPSS*VWMFHMVIQDKIDLRLQRWLV 182
SLV * KLK R + +CR + P S VWMF MV ++ L R+++
Sbjct: 171 SLVG*IHFWKLKETRPFLLCRGFLPLSLVWMFRMVHHGRMYHPLLRYVM 317
Score = 33.1 bits (66), Expect = 4.6
Identities = 17/46 (36%), Positives = 21/46 (45%)
Frame = -3 / -3
Query: 173 PLQPKVYLVLDDHVKHPYLR*WWVLATHVVLTKMLQLAATSSDHQA 36
P Q V+ + H KHPY R*W +T Q +S HQA
Sbjct: 308 PQQWMVHSTVVHHAKHPYQR*W*EPSTQ*EWPGFFQFPKVNSTHQA 171
>gb|CW061657.1|CW061657 104_305_10520518_115_30153 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10520518, DNA
sequence
Length = 560
Score = 74.8 bits (157), Expect = 1e-012
Identities = 31/47 (65%), Positives = 39/47 (82%)
Frame = +2 / +1
Query: 35 KLGGLNSLLQVEASSSIPHVSQVPTIILGMDVSHGHPGQDRPSVAAV 175
+LGGLNSLL++E + +IP VS+VPTII GMDVSHG P + PS+AAV
Sbjct: 376 QLGGLNSLLEIERNQAIPIVSRVPTIIFGMDVSHGAPRSNVPSIAAV 516
Score = 58.8 bits (122), Expect = 9e-008
Identities = 27/48 (56%), Positives = 31/48 (64%)
Frame = -2 / -1
Query: 180 LTTAATEGLSCPG*PCETSIPKMMVGTCDTCGIDEDASTCSNEFRPPS 37
L TAA +G G PCETSIPK+MVGT DT G+ S +EF PPS
Sbjct: 521 LHTAAMDGTFDRGAPCETSIPKIMVGTLDTIGMAWFLSISKSEFNPPS 378
Score = 41.4 bits (84), Expect = 0.015
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +1 / +3
Query: 37 AWWSELVAAS*SIFVNTTCVASTHHHLRYGCFTW 138
AWW E +* ++ CV ++H+L YGCF W
Sbjct: 378 AWWVEFTFGN*KKPGHSYCVEGSYHYLWYGCFAW 479
Score = 38.6 bits (78), Expect = 0.10
Identities = 20/49 (40%), Positives = 28/49 (57%)
Frame = +3 / +2
Query: 36 SLVV*TRCCKLKHLRQYHMCRKYPPSS*VWMFHMVIQDKIDLRLQRWLV 182
SLV * KLK R + +CR + P S VWMF MV ++ L R+++
Sbjct: 377 SLVG*IHFWKLKETRPFLLCRGFLPLSLVWMFRMVHHGRMYHPLLRYVM 523
Score = 33.1 bits (66), Expect = 4.6
Identities = 17/46 (36%), Positives = 21/46 (45%)
Frame = -3 / -2
Query: 173 PLQPKVYLVLDDHVKHPYLR*WWVLATHVVLTKMLQLAATSSDHQA 36
P Q V+ + H KHPY R*W +T Q +S HQA
Sbjct: 514 PQQWMVHSTVVHHAKHPYQR*W*EPSTQ*EWPGFFQFPKVNSTHQA 377
>gb|CF485254.1|CF485254 POL1_30_H08.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_30_H08_A002 3', mRNA sequence
Length = 573
Score = 73.9 bits (155), Expect = 2e-012
Identities = 25/48 (52%), Positives = 36/48 (75%)
Frame = +2 / +1
Query: 572 PKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFSADEMQEFVHSLSYVY 715
P FDF++C+HAG+ GT+RPTHYHVL D+ F+A +Q ++L Y+Y
Sbjct: 1 PTEFDFFLCSHAGIKGTSRPTHYHVLRDDNKFTAGALQSLTYNLCYLY 144
>gb|CW443602.1|CW443602 fsbb001f163m16f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f163m16, DNA
sequence
Length = 725
Score = 73.0 bits (153), Expect = 5e-012
Identities = 26/32 (81%), Positives = 30/32 (93%)
Frame = +2 / +1
Query: 617 GTTRPTHYHVLHDEIGFSADEMQEFVHSLSYV 712
GTTRPTHYH+LHDEIGF+ D++QE VHSLSYV
Sbjct: 55 GTTRPTHYHILHDEIGFNPDDLQELVHSLSYV 150
Score = 48.3 bits (99), Expect = 1e-004
Identities = 24/33 (72%), Positives = 26/33 (78%)
Frame = -2 / -1
Query: 714 YT*DSE*TNSCISSAEKPISSCRT**WVGLVVP 616
YT*+SE T+SC SS KPISSC ** VGLVVP
Sbjct: 152 YT*ESECTSSCRSSGLKPISSCSI***VGLVVP 54
Score = 35.4 bits (71), Expect = 0.94
Identities = 14/30 (46%), Positives = 22/30 (73%)
Frame = -1 / -3
Query: 715 VHVR*RMNKLLHLVCRETYLVVQNMIVGGP 626
+HVR RM++LL ++ E YL++Q MI+ P
Sbjct: 153 LHVRERMHQLLQIIRIEAYLIMQYMIMSWP 64
>gb|CF488341.1|CF488341 POL1_49_G04.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_49_G04_A002 3', mRNA sequence
Length = 665
Score = 72.1 bits (151), Expect = 9e-012
Identities = 25/45 (55%), Positives = 34/45 (75%)
Frame = +2 / +2
Query: 581 FDFYMCAHAGMIGTTRPTHYHVLHDEIGFSADEMQEFVHSLSYVY 715
FDF++C+HAG+ GT+RP HYHVL DE F+AD +Q ++L Y Y
Sbjct: 5 FDFFLCSHAGIKGTSRPAHYHVLWDENNFTADALQTLTNNLCYTY 139
>gb|CW456784.1|CW456784 fsbb001f202e21f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f202e21, DNA
sequence
Length = 595
Score = 71.6 bits (150), Expect = 1e-011
Identities = 22/44 (50%), Positives = 37/44 (84%)
Frame = +2 / +2
Query: 581 FDFYMCAHAGMIGTTRPTHYHVLHDEIGFSADEMQEFVHSLSYV 712
+DFY+C+H G++GT+RPTHY+ L DE GF +D++Q+ +++L +V
Sbjct: 2 YDFYLCSHTGLLGTSRPTHYYSLVDEHGFGSDDLQKLIYNLCFV 133
Score = 37.3 bits (75), Expect = 0.26
Identities = 20/34 (58%), Positives = 21/34 (61%)
Frame = -2 / -2
Query: 684 CISSAEKPISSCRT**WVGLVVPIIPACAHM*KS 583
C SS KP SS R ** VGL+VP P H *KS
Sbjct: 105 CRSSDPKPCSSTRL**CVGLLVPRSPVWLHR*KS 4
>gb|BE595412.1|BE595412 PI1_55_A07.b1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 502
Score = 71.2 bits (149), Expect = 2e-011
Identities = 31/63 (49%), Positives = 40/63 (63%)
Frame = +2 / +2
Query: 2 YLLNLLMKINAKLGGLNSLLQVEASSSIPHVSQVPTIILGMDVSHGHPGQDRPSVAAVVS 181
YL N+ +KIN K+GG N++L + IP VS VPTII G DV+H HPG+D A V
Sbjct: 173 YLANVALKINVKVGGRNTVLVDALTRRIPLVSDVPTIIFGADVTHPHPGEDSSPSIAAVV 352
Query: 182 SRQ 190
+ Q
Sbjct: 353 ASQ 361
Score = 46.0 bits (94), Expect = 6e-004
Identities = 17/37 (45%), Positives = 26/37 (70%)
Frame = +2 / +2
Query: 158 PSVAAVVSSRQWPLISRYRASVHTQSARLEMMSSLFK 268
PS+AAVV+S+ WP +++Y V Q+ R E++ LFK
Sbjct: 332 PSIAAVVASQDWPEVTKYAGLVSAQTHRQELIQDLFK 442
Score = 46.0 bits (94), Expect(2) = 1e-006
Identities = 23/51 (45%), Positives = 30/51 (58%)
Frame = -2 / -2
Query: 153 SCPG*PCETSIPKMMVGTCDTCGIDEDASTCSNEFRPPSFALIFISKLSRY 1
S PG TS PK++VGT T GI ++ S FRPP+F IF + +RY
Sbjct: 324 SSPGWGWVTSAPKIIVGTSLTRGILLVKASTSTVFRPPTFTFIFRATFARY 172
Score = 27.2 bits (53), Expect(2) = 1e-006
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -1 / -1
Query: 232 LGVH*CSISRDKRPLTRTNHRCNRRS 155
L H* I + RP+ R+N+ CN R+
Sbjct: 406 LSTH*SCILGNLRPVLRSNNSCNGRT 329
>gb|BF655915.1|BF655915 FM1_42_D11.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 609
Score = 71.2 bits (149), Expect = 2e-011
Identities = 25/31 (80%), Positives = 29/31 (93%)
Frame = +2 / +3
Query: 623 TRPTHYHVLHDEIGFSADEMQEFVHSLSYVY 715
TRPTHYH+LHDEIGF+ D++QE VHSLSYVY
Sbjct: 3 TRPTHYHILHDEIGFNPDDLQELVHSLSYVY 95
Score = 46.0 bits (94), Expect = 6e-004
Identities = 23/31 (74%), Positives = 25/31 (80%)
Frame = -2 / -3
Query: 714 YT*DSE*TNSCISSAEKPISSCRT**WVGLV 622
YT*+SE T+SC SS KPISSCR ** VGLV
Sbjct: 94 YT*ESECTSSCRSSGLKPISSCRI***VGLV 2
Score = 40.5 bits (82), Expect = 0.028
Identities = 16/30 (53%), Positives = 23/30 (76%)
Frame = -1 / -2
Query: 715 VHVR*RMNKLLHLVCRETYLVVQNMIVGGP 626
VHVR RM++LL ++ E YL++QNMI+ P
Sbjct: 95 VHVRERMHQLLQIIRIEAYLIMQNMIMSWP 6
Score = 32.7 bits (65), Expect = 6.3
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = +3 / +1
Query: 624 QGPPTIMFCTTR*VSLQTRCRSLFIRYLTC 713
+G I+FC R* S+ CRS IR LTC
Sbjct: 4 RGQLIIIFCMMR*ASILMICRSWCIRSLTC 93
>gb|CF770658.1|CF770658 DSBF1_9_B10.b1_A010 Drought-stressed before flowering Sorghum
bicolor cDNA clone DSBF1_9_B10_A010 5', mRNA sequence
Length = 578
Score = 71.2 bits (149), Expect = 2e-011
Identities = 31/63 (49%), Positives = 40/63 (63%)
Frame = +2 / +1
Query: 2 YLLNLLMKINAKLGGLNSLLQVEASSSIPHVSQVPTIILGMDVSHGHPGQDRPSVAAVVS 181
YL N+ +KIN K+GG N++L + IP VS VPTII G DV+H HPG+D A V
Sbjct: 202 YLANVALKINVKVGGRNTVLVDALTRRIPLVSDVPTIIFGADVTHPHPGEDSSPSIAAVV 381
Query: 182 SRQ 190
+ Q
Sbjct: 382 ASQ 390
Score = 46.0 bits (94), Expect = 6e-004
Identities = 17/37 (45%), Positives = 26/37 (70%)
Frame = +2 / +1
Query: 158 PSVAAVVSSRQWPLISRYRASVHTQSARLEMMSSLFK 268
PS+AAVV+S+ WP +++Y V Q+ R E++ LFK
Sbjct: 361 PSIAAVVASQDWPEVTKYAGLVSAQTHRQELIQDLFK 471
Score = 46.0 bits (94), Expect(2) = 1e-006
Identities = 23/51 (45%), Positives = 30/51 (58%)
Frame = -2 / -1
Query: 153 SCPG*PCETSIPKMMVGTCDTCGIDEDASTCSNEFRPPSFALIFISKLSRY 1
S PG TS PK++VGT T GI ++ S FRPP+F IF + +RY
Sbjct: 353 SSPGWGWVTSAPKIIVGTSLTRGILLVKASTSTVFRPPTFTFIFRATFARY 201
Score = 27.2 bits (53), Expect(2) = 1e-006
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -1 / -3
Query: 232 LGVH*CSISRDKRPLTRTNHRCNRRS 155
L H* I + RP+ R+N+ CN R+
Sbjct: 435 LSTH*SCILGNLRPVLRSNNSCNGRT 358
>gb|CL174610.1|CL174610 104_379_10891763_116_31769_131 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10891763, DNA
sequence
Length = 743
Score = 69.8 bits (146), Expect = 4e-011
Identities = 27/27 (100%), Positives = 27/27 (100%)
Frame = +2 / +3
Query: 632 THYHVLHDEIGFSADEMQEFVHSLSYV 712
THYHVLHDEIGFSADEMQEFVHSLSYV
Sbjct: 3 THYHVLHDEIGFSADEMQEFVHSLSYV 83
Score = 62.5 bits (130), Expect = 7e-009
Identities = 27/28 (96%), Positives = 28/28 (100%)
Frame = -2 / -2
Query: 714 YT*DSE*TNSCISSAEKPISSCRT**WV 631
YT*+SE*TNSCISSAEKPISSCRT**WV
Sbjct: 85 YT*ESE*TNSCISSAEKPISSCRT**WV 2
Score = 54.7 bits (113), Expect = 2e-006
Identities = 21/28 (75%), Positives = 25/28 (89%)
Frame = -1 / -1
Query: 715 VHVR*RMNKLLHLVCRETYLVVQNMIVG 632
+H+R RMNKLLH V RETYL+VQNMI+G
Sbjct: 86 LHIRERMNKLLHFVSRETYLIVQNMIMG 3
Score = 52.8 bits (109), Expect = 5e-006
Identities = 22/27 (81%), Positives = 24/27 (88%)
Frame = +1 / +2
Query: 634 PLSCSARRDRFLCRRDAGVCSFAILRV 714
PLSCSAR DRFLC R+AGVCSFA+L V
Sbjct: 5 PLSCSAR*DRFLC*RNAGVCSFALLCV 85
Score = 50.6 bits (104), Expect = 3e-005
Identities = 21/27 (77%), Positives = 22/27 (81%)
Frame = +3 / +1
Query: 633 PTIMFCTTR*VSLQTRCRSLFIRYLTC 713
P IMFCT R*VSL T+CRSLFIR L C
Sbjct: 4 PIIMFCTMR*VSLLTKCRSLFIRSLMC 84
Score = 50.1 bits (103), Expect = 4e-005
Identities = 21/27 (77%), Positives = 22/27 (81%)
Frame = -3 / -3
Query: 713 TRKIANEQTPASRLQRNLSRRAEHDSG 633
T K ANEQTPA R QRNLS RAEHD+G
Sbjct: 84 THKRANEQTPAFRQQRNLSHRAEHDNG 4
>gb|CW066459.1|CW066459 104_313_10523697_115_30149 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10523697, DNA
sequence
Length = 568
Score = 68.0 bits (142), Expect = 2e-010
Identities = 25/33 (75%), Positives = 27/33 (81%)
Frame = +2 / -2
Query: 617 GTTRPTHYHVLHDEIGFSADEMQEFVHSLSYVY 715
GTTRP HY VLHDEIGFS D +QE +H LSYVY
Sbjct: 537 GTTRPAHYQVLHDEIGFSPDALQELIHCLSYVY 439
Score = 41.4 bits (84), Expect = 0.015
Identities = 19/33 (57%), Positives = 23/33 (69%)
Frame = -2 / +2
Query: 714 YT*DSE*TNSCISSAEKPISSCRT**WVGLVVP 616
YT + + +SC +S EKPISSC T * GLVVP
Sbjct: 440 YTXERQWMSSCRASGEKPISSCSTW*CAGLVVP 538
Score = 34.1 bits (68), Expect = 2.4
Identities = 11/32 (34%), Positives = 22/32 (68%)
Frame = -1 / +1
Query: 715 VHVR*RMNKLLHLVCRETYLVVQNMIVGGPCC 620
+H+ +++LL + RE L+VQ++++ PCC
Sbjct: 439 IHIXEAVDELLQSIGREADLIVQHLVMRWPCC 534
>gb|CW407009.1|CW407009 fsbb001f100e16k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f100e16, DNA
sequence
Length = 677
Score = 63.8 bits (133), Expect = 3e-009
Identities = 24/51 (47%), Positives = 35/51 (68%)
Frame = +2 / +3
Query: 359 IFRDGVSESQFTQVINIELDQIIEACKFLDEKWSPKFTVIVAQKNHHTKFF 511
+FRDGVSE QF+ V+ E+D I +AC +++ + P T +V QK HHT+ F
Sbjct: 210 LFRDGVSEGQFSHVLLHEMDAIRKACASMEDGYLPPVTFVVVQKRHHTRLF 362
Score = 39.1 bits (79), Expect = 0.074
Identities = 23/49 (46%), Positives = 26/49 (53%)
Frame = -2 / -2
Query: 510 KNLVWWFF*ATITVNLGDHFSSRNLHASMI*SSSMLMTWVN*LSLTPSL 364
K+LVW F T V G SS A +I S S TW+N SLTPSL
Sbjct: 361 KSLVWCLFCTTTNVTGGR*PSSIEAQAFLIASISWSKTWLNCPSLTPSL 215
>gb|CW447924.1|CW447924 fsbb001f181e09k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f181e09, DNA
sequence
Length = 351
Score = 57.0 bits (118), Expect(2) = 3e-009
Identities = 18/27 (66%), Positives = 24/27 (88%)
Frame = +2 / -2
Query: 533 VLPGTVVDSKVCHPKNFDFYMCAHAGM 613
VL GTVVD+K+CHP FDFY+C+H+G+
Sbjct: 284 VLSGTVVDTKICHPSEFDFYLCSHSGI 204
Score = 35.4 bits (71), Expect = 0.94
Identities = 16/27 (59%), Positives = 17/27 (62%)
Frame = -2 / +1
Query: 612 IPACAHM*KSKFLGWQTLLSTTVPGRT 532
IP *KS LGWQ +STTVP RT
Sbjct: 205 IPE*LQR*KSNSLGWQIFVSTTVPERT 285
Score = 26.3 bits (51), Expect(2) = 3e-009
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = +2 / -3
Query: 617 GTTRPTHYHV 646
GT+RP HYHV
Sbjct: 31 GTSRPAHYHV 2
>gb|BG355831.1|BG355831 EM1_17_C03.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 541
Score = 63.4 bits (132), Expect = 4e-009
Identities = 22/28 (78%), Positives = 26/28 (92%)
Frame = +2 / +2
Query: 632 THYHVLHDEIGFSADEMQEFVHSLSYVY 715
THYH+LHDEIGF+ D++QE VHSLSYVY
Sbjct: 2 THYHILHDEIGFNPDDLQELVHSLSYVY 85
Score = 36.8 bits (74), Expect = 0.36
Identities = 16/22 (72%), Positives = 18/22 (81%)
Frame = -2 / -2
Query: 714 YT*DSE*TNSCISSAEKPISSC 649
YT*+SE T+SC SS KPISSC
Sbjct: 84 YT*ESECTSSCRSSGLKPISSC 19
Score = 34.5 bits (69), Expect = 1.8
Identities = 14/27 (51%), Positives = 21/27 (77%)
Frame = -1 / -1
Query: 715 VHVR*RMNKLLHLVCRETYLVVQNMIV 635
VHVR RM++LL ++ E YL++Q MI+
Sbjct: 85 VHVRERMHQLLQIIRIEAYLIMQYMIM 5
>gb|BF655982.1|BF655982 FM1_42_D11.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 616
Score = 61.1 bits (127), Expect = 2e-008
Identities = 24/32 (75%), Positives = 29/32 (90%)
Frame = +2 / +1
Query: 2 YLLNLLMKINAKLGGLNSLLQVEASSSIPHVS 97
YL N+L+KINAKLGG+NSLLQ+E S +IPHVS
Sbjct: 520 YLTNVLLKINAKLGGMNSLLQIETSPAIPHVS 615
Score = 41.4 bits (84), Expect = 0.015
Identities = 19/32 (59%), Positives = 19/32 (59%)
Frame = -2 / -3
Query: 96 DTCGIDEDASTCSNEFRPPSFALIFISKLSRY 1
DT GI D S SNEF PPSFA IF RY
Sbjct: 614 DT*GIAGDVSIWSNEFMPPSFAFIFSRTFVRY 519
Score = 33.6 bits (67), Expect = 3.3
Identities = 12/25 (48%), Positives = 19/25 (76%)
Frame = +1 / +3
Query: 22 EDQCKAWWSELVAAS*SIFVNTTCV 96
+D+CKA W E VA +*+I N++C+
Sbjct: 540 KDKCKAGWHEFVAPN*NIPSNSSCI 614
Score = 32.2 bits (64), Expect = 8.7
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = -1 / -2
Query: 73 CFNLQQRVQTTKLCIDL 23
CFNL+QR+ T+LCI L
Sbjct: 591 CFNLEQRIHATQLCIYL 541
>gb|CW030073.1|CW030073 104_258_10500040_116_30404 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10500040, DNA
sequence
Length = 734
Score = 60.6 bits (126), Expect = 2e-008
Identities = 25/33 (75%), Positives = 28/33 (84%)
Frame = +2 / +1
Query: 173 VVSSRQWPLISRYRASVHTQSARLEMMSSLFKP 271
VV SR WPLISRYRASV TQS ++EM+ SLFKP
Sbjct: 406 VVGSRCWPLISRYRASVRTQSPKVEMIDSLFKP 504
Score = 44.6 bits (91), Expect = 0.002
Identities = 19/33 (57%), Positives = 22/33 (66%)
Frame = -2 / -1
Query: 270 GLNNEDIISSLADWVCTDALYLEIRGH*RELTT 172
GLN E IIS+ DWV TDALY +I G + TT
Sbjct: 503 GLNRESIISTFGDWVRTDALYRDINGQHLDPTT 405
>gb|CW433307.1|CW433307 fsbb001f148h14k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f148h14, DNA
sequence
Length = 759
Score = 60.6 bits (126), Expect = 2e-008
Identities = 24/38 (63%), Positives = 30/38 (78%)
Frame = +2 / -3
Query: 38 LGGLNSLLQVEASSSIPHVSQVPTIILGMDVSHGHPGQ 151
LGG+NS L +E IP V+Q+PT+ILGMDVSHG PG+
Sbjct: 142 LGGMNSKLALEHRQMIPVVTQIPTLILGMDVSHGSPGR 29
Score = 42.3 bits (86), Expect = 0.008
Identities = 20/37 (54%), Positives = 23/37 (62%)
Frame = -2 / +3
Query: 147 PG*PCETSIPKMMVGTCDTCGIDEDASTCSNEFRPPS 37
PG PCETS+P++ VG T GI S S EF PPS
Sbjct: 33 PGEPCETSMPRINVGI*VTTGII*RCSNASLEFIPPS 143
Score = 39.6 bits (80), Expect = 0.054
Identities = 18/38 (47%), Positives = 21/38 (55%)
Frame = -1 / +2
Query: 148 SWMTM*NIHT*DDGGYLRHMWY*RRCFNLQQRVQTTKL 35
+W TM NIH + YL H WY F Q RV +TKL
Sbjct: 32 TWRTMRNIHAKN*CWYLSHNWYHLTMFQCQFRVHSTKL 145
>gb|CL173508.1|CL173508 104_377_10890920_116_31793_056 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10890920, DNA
sequence
Length = 689
Score = 41.4 bits (84), Expect(2) = 3e-008
Identities = 14/32 (43%), Positives = 23/32 (71%)
Frame = +2 / +3
Query: 617 GTTRPTHYHVLHDEIGFSADEMQEFVHSLSYV 712
GT+RPTHY +L D+ F+AD ++ ++L Y+
Sbjct: 135 GTSRPTHYDLLQDDNKFTADALKSLTYNLCYL 230
Score = 37.3 bits (75), Expect(2) = 3e-008
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +2 / +3
Query: 542 GTVVDSKVCHPKNFDFYMCAHAG 610
GTVVD + H FD ++C+HAG
Sbjct: 15 GTVVDRNIGHTTEFDIFLCSHAG 83
>gb|CW253696.1|CW253696 104_717_11225238_148_35107_023 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11225238, DNA
sequence
Length = 665
Score = 60.2 bits (125), Expect = 3e-008
Identities = 21/27 (77%), Positives = 25/27 (92%)
Frame = +2 / +1
Query: 632 THYHVLHDEIGFSADEMQEFVHSLSYV 712
THYH+LHDEIGF+ D++QE VHSLSYV
Sbjct: 1 THYHILHDEIGFNPDDLQELVHSLSYV 81
Score = 36.8 bits (74), Expect = 0.36
Identities = 16/22 (72%), Positives = 18/22 (81%)
Frame = -2 / -1
Query: 714 YT*DSE*TNSCISSAEKPISSC 649
YT*+SE T+SC SS KPISSC
Sbjct: 83 YT*ESECTSSCRSSGLKPISSC 18
Score = 33.1 bits (66), Expect = 4.6
Identities = 13/27 (48%), Positives = 21/27 (77%)
Frame = -1 / -3
Query: 715 VHVR*RMNKLLHLVCRETYLVVQNMIV 635
+HVR RM++LL ++ E YL++Q MI+
Sbjct: 84 LHVRERMHQLLQIIRIEAYLIMQYMIM 4
>gb|CW066458.1|CW066458 104_313_10523697_115_30147 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10523697, DNA
sequence
Length = 532
Score = 58.3 bits (121), Expect = 1e-007
Identities = 21/29 (72%), Positives = 23/29 (79%)
Frame = +2 / -2
Query: 629 PTHYHVLHDEIGFSADEMQEFVHSLSYVY 715
P HY VLHDEIGFS D +QE +H LSYVY
Sbjct: 525 PAHYQVLHDEIGFSPDALQELIHCLSYVY 439
Score = 35.0 bits (70), Expect = 1.3
Identities = 16/29 (55%), Positives = 20/29 (68%)
Frame = -2 / +2
Query: 714 YT*DSE*TNSCISSAEKPISSCRT**WVG 628
YT*+ + +SC +S EKPISSC T * G
Sbjct: 440 YT*ERQWMSSCRASGEKPISSCSTW*CAG 526
>gb|CW102127.1|CW102127 104_470_11011172_116_34417_076 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11011172, DNA
sequence
Length = 647
Score = 58.3 bits (121), Expect = 1e-007
Identities = 21/29 (72%), Positives = 23/29 (79%)
Frame = +2 / -2
Query: 629 PTHYHVLHDEIGFSADEMQEFVHSLSYVY 715
P HY VLHDEIGFS D +QE +H LSYVY
Sbjct: 646 PAHYQVLHDEIGFSPDALQELIHCLSYVY 560
Score = 35.0 bits (70), Expect = 1.3
Identities = 16/29 (55%), Positives = 20/29 (68%)
Frame = -2 / +3
Query: 714 YT*DSE*TNSCISSAEKPISSCRT**WVG 628
YT*+ + +SC +S EKPISSC T * G
Sbjct: 561 YT*ERQWMSSCRASGEKPISSCSTW*CAG 647
>gb|BG050659.1|BG050659 FM1_71_B03.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 532
Score = 58.3 bits (121), Expect = 1e-007
Identities = 23/23 (100%), Positives = 23/23 (100%)
Frame = +2 / +3
Query: 647 LHDEIGFSADEMQEFVHSLSYVY 715
LHDEIGFSADEMQEFVHSLSYVY
Sbjct: 3 LHDEIGFSADEMQEFVHSLSYVY 71
Score = 52.4 bits (108), Expect = 7e-006
Identities = 22/23 (95%), Positives = 23/23 (100%)
Frame = -2 / -1
Query: 714 YT*DSE*TNSCISSAEKPISSCR 646
YT*+SE*TNSCISSAEKPISSCR
Sbjct: 70 YT*ESE*TNSCISSAEKPISSCR 2
Score = 45.5 bits (93), Expect = 9e-004
Identities = 17/23 (73%), Positives = 20/23 (86%)
Frame = -1 / -3
Query: 715 VHVR*RMNKLLHLVCRETYLVVQ 647
+H+R RMNKLLH V RETYL+VQ
Sbjct: 71 IHIRERMNKLLHFVSRETYLIVQ 3
Score = 43.7 bits (89), Expect = 0.003
Identities = 18/23 (78%), Positives = 19/23 (82%)
Frame = +3 / +1
Query: 645 FCTTR*VSLQTRCRSLFIRYLTC 713
FCT R*VSL T+CRSLFIR L C
Sbjct: 1 FCTMR*VSLLTKCRSLFIRSLMC 69
Score = 41.8 bits (85), Expect = 0.011
Identities = 18/23 (78%), Positives = 20/23 (86%)
Frame = +1 / +2
Query: 646 SARRDRFLCRRDAGVCSFAILRV 714
SAR DRFLC R+AGVCSFA+L V
Sbjct: 2 SAR*DRFLC*RNAGVCSFALLCV 70
Score = 40.5 bits (82), Expect = 0.028
Identities = 18/23 (78%), Positives = 18/23 (78%)
Frame = -3 / -2
Query: 713 TRKIANEQTPASRLQRNLSRRAE 645
T K ANEQTPA R QRNLS RAE
Sbjct: 69 THKRANEQTPAFRQQRNLSHRAE 1
>gb|CW102128.1|CW102128 104_470_11011172_148_34413_076 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11011172, DNA
sequence
Length = 295
Score = 41.8 bits (85), Expect(3) = 3e-007
Identities = 15/27 (55%), Positives = 20/27 (74%)
Frame = +2 / +3
Query: 449 EKWSPKFTVIVAQKNHHTKFFQTASPD 529
+ W PKFT+IVAQ NH T+FF+ + D
Sbjct: 198 DTWLPKFTMIVAQNNHLTRFFKYGNND 278
Score = 31.8 bits (63), Expect(2) = 1.2
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +1 / +2
Query: 463 QVHCDCCSKEPPHQV 507
QVH DCC+K+P H V
Sbjct: 212 QVHNDCCAKQPSHTV 256
Score = 29.5 bits (58), Expect(3) = 0.45
Identities = 13/21 (61%), Positives = 13/21 (61%)
Frame = -2 / -1
Query: 510 KNLVWWFF*ATITVNLGDHFS 448
KN V W F ATI VNLG S
Sbjct: 259 KNRVRWLFCATIIVNLGSQVS 197
Score = 26.7 bits (52), Expect(3) = 3e-007
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +2 / +3
Query: 356 IIFRDGVSESQFT 394
I FRDGVSE +FT
Sbjct: 12 IYFRDGVSEGEFT 50
Score = 22.1 bits (42), Expect(3) = 3e-007
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +2 / +1
Query: 398 VINIELDQIIEACKF 442
V+NIEL QIIE F
Sbjct: 55 VLNIELAQIIEVETF 99
Score = 20.8 bits (39), Expect(3) = 0.45
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = -2 / -1
Query: 393 VN*LSLTPSLKII 355
VN SLTPSLK I
Sbjct: 49 VNSPSLTPSLKYI 11
Score = 20.3 bits (38), Expect(2) = 1.2
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = +1 / +3
Query: 403 QH*AGSDHRG 432
+H*AG+DH G
Sbjct: 60 EH*AGTDH*G 89
Score = 18.5 bits (34), Expect(3) = 0.45
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = -2 / -3
Query: 459 DHFSSRNLHASMI*SSSMLMT 397
+ + N+ SMI +SSM T
Sbjct: 116 EQITGGNVSTSMICASSMFRT 54
>gb|BZ342950.1|BZ342950 ho31g07.b1 WGS-SbicolorF (JM107 adapted methyl filtered) Sorghum
bicolor genomic clone ho31g07 5', DNA sequence
Length = 559
Score = 56.1 bits (116), Expect = 6e-007
Identities = 25/50 (50%), Positives = 31/50 (62%)
Frame = +2 / +1
Query: 32 AKLGGLNSLLQVEASSSIPHVSQVPTIILGMDVSHGHPGQDRPSVAAVVS 181
AK+GG N++L S IP V+ PTII G DV+H HPG+D A VS
Sbjct: 307 AKVGGRNTVLVDAVSRGIPLVTDRPTIIFGADVTHPHPGEDSSPSIAAVS 456
Score = 42.3 bits (86), Expect = 0.008
Identities = 23/50 (46%), Positives = 28/50 (56%)
Frame = -2 / -3
Query: 180 LTTAATEGLSCPG*PCETSIPKMMVGTCDTCGIDEDASTCSNEFRPPSFA 31
LT A LS PG* TS P M+VG T GI + ++ S F PP+FA
Sbjct: 455 LTAAIEGLLSSPG*G*VTSAPNMIVGRSVTRGIPLETASTSTVFLPPTFA 306
>gb|BG463556.1|BG463556 EM1_50_A05.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 491
Score = 56.1 bits (116), Expect = 6e-007
Identities = 24/47 (51%), Positives = 31/47 (65%)
Frame = +2 / +2
Query: 2 YLLNLLMKINAKLGGLNSLLQVEASSSIPHVSQVPTIILGMDVSHGH 142
YL N+ +KIN K+GG N++L + IP VS PTII G DV+H H
Sbjct: 350 YLANVALKINVKVGGRNTVLVDALTRRIPLVSDRPTIIFGADVTHPH 490
>gb|CW119121.1|CW119121 104_495_11108581_116_34626_049 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11108581, DNA
sequence
Length = 636
Score = 34.5 bits (69), Expect(3) = 1e-006
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +2 / +1
Query: 173 VVSSRQWPLISRYRASVHTQSARLEMMSSLF 265
VV+S WP I++YR V Q R E++ LF
Sbjct: 124 VVASMDWPEITKYRGLVSAQPHRQEIIEDLF 216
Score = 31.8 bits (63), Expect(3) = 1e-006
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +2 / +3
Query: 359 IFRDGVSESQFTQVINIELDQI 424
++RDGVSE QF+ V+ E+D I
Sbjct: 492 LYRDGVSEGQFSHVLLHEMDAI 557
Score = 23.5 bits (45), Expect(3) = 1e-006
Identities = 9/26 (34%), Positives = 14/26 (53%)
Frame = +2 / +3
Query: 290 GLIRESLIDFYTSSGKRKPEHIIIFR 367
GL+ L+ + R+PE II +R
Sbjct: 339 GLVCRELLIAFRRKTNRRPERIIFYR 416
>gb|CL185414.1|CL185414 104_399_10899512_116_32395_024 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10899512, DNA
sequence
Length = 643
Score = 38.2 bits (77), Expect(2) = 1e-006
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +2 / -2
Query: 425 IEACKFLDEKWSPKFTVIVAQKNHHTKFFQTASPD 529
++AC L+ + P T +V QK HHT+ F D
Sbjct: 228 LQACASLEPNYQPPVTFVVVQKRHHTRLFANNHKD 124
Score = 35.0 bits (70), Expect(2) = 1e-006
Identities = 15/21 (71%), Positives = 16/21 (76%)
Frame = +2 / -2
Query: 362 FRDGVSESQFTQVINIELDQI 424
FRDGVSE QF QV+ ELD I
Sbjct: 369 FRDGVSEGQFYQVLLYELDAI 307
>gb|CW302363.1|CW302363 104_786_11464680_116_35663_088 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11464680, DNA
sequence
Length = 627
Score = 39.1 bits (79), Expect(2) = 1e-006
Identities = 17/47 (36%), Positives = 26/47 (55%)
Frame = +2 / -1
Query: 173 VVSSRQWPLISRYRASVHTQSARLEMMSSLFKPRGTDDDGLIRESLI 313
VV+S WP +S+YR V +Q R E+++ LF GL+ +I
Sbjct: 429 VVASMDWPEVSKYRCLVSSQGHREEIIADLFTQVKDPQKGLLHGGMI 289
Score = 34.1 bits (68), Expect(2) = 1e-006
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +2 / -1
Query: 299 RESLIDFYTSSGKRKPEHIIIFR 367
RE L+ FY ++G RKP II +R
Sbjct: 207 RELLVSFYRANGSRKPSRIIFYR 139
>gb|CW214679.1|CW214679 104_646_11194141_116_37048_051 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11194141, DNA
sequence
Length = 487
Score = 42.3 bits (86), Expect(2) = 1e-006
Identities = 16/31 (51%), Positives = 21/31 (67%)
Frame = +2 / +1
Query: 617 GTTRPTHYHVLHDEIGFSADEMQEFVHSLSY 709
G +RPTHYHVL DE +AD +Q+ + L Y
Sbjct: 184 GASRPTHYHVLFDENNCTADALQKLTY*LCY 276
Score = 30.9 bits (61), Expect(2) = 1e-006
Identities = 9/14 (64%), Positives = 12/14 (85%)
Frame = +2 / +1
Query: 542 GTVVDSKVCHPKNF 583
GTVVD+K+CHP +
Sbjct: 22 GTVVDTKICHPSEY 63
>gb|CW140185.1|CW140185 104_530_11135648_148_34919_022 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11135648, DNA
sequence
Length = 680
Score = 54.7 bits (113), Expect = 2e-006
Identities = 24/50 (48%), Positives = 31/50 (62%)
Frame = +2 / +2
Query: 32 AKLGGLNSLLQVEASSSIPHVSQVPTIILGMDVSHGHPGQDRPSVAAVVS 181
+K+GG N++L S IP V+ PTII G DV+H HPG+D A VS
Sbjct: 140 SKVGGRNTVLADAVSRRIPLVTDRPTIIFGADVTHPHPGEDSSPSIAAVS 289
Score = 44.6 bits (91), Expect = 0.002
Identities = 23/50 (46%), Positives = 28/50 (56%)
Frame = -2 / -3
Query: 183 ELTTAATEGLSCPG*PCETSIPKMMVGTCDTCGIDEDASTCSNEFRPPSF 34
+LT A LS PG* TS P MMVG T G+ D ++ S F PP+F
Sbjct: 291 QLTAAMEGLLSSPG*GWVTSAPNMMVGLSVTKGMRLDTASASTVFLPPTF 142
>gb|CW243936.1|CW243936 104_704_11220319_148_37582_022 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11220319, DNA
sequence
Length = 689
Score = 54.7 bits (113), Expect = 2e-006
Identities = 24/50 (48%), Positives = 31/50 (62%)
Frame = +2 / -3
Query: 32 AKLGGLNSLLQVEASSSIPHVSQVPTIILGMDVSHGHPGQDRPSVAAVVS 181
+K+GG N++L S IP V+ PTII G DV+H HPG+D A VS
Sbjct: 204 SKVGGRNTVLADAVSRRIPLVTDRPTIIFGADVTHPHPGEDSSPSIAAVS 55
Score = 44.6 bits (91), Expect = 0.002
Identities = 23/50 (46%), Positives = 28/50 (56%)
Frame = -2 / +2
Query: 183 ELTTAATEGLSCPG*PCETSIPKMMVGTCDTCGIDEDASTCSNEFRPPSF 34
+LT A LS PG* TS P MMVG T G+ D ++ S F PP+F
Sbjct: 53 QLTAAMEGLLSSPG*GWVTSAPNMMVGLSVTKGMRLDTASASTVFLPPTF 202
>gb|CW358042.1|CW358042 fsbb001f024p12f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f024p12, DNA
sequence
Length = 782
Score = 54.7 bits (113), Expect = 2e-006
Identities = 24/50 (48%), Positives = 31/50 (62%)
Frame = +2 / -1
Query: 32 AKLGGLNSLLQVEASSSIPHVSQVPTIILGMDVSHGHPGQDRPSVAAVVS 181
+K+GG N++L S IP V+ PTII G DV+H HPG+D A VS
Sbjct: 230 SKVGGRNTVLADAVSRRIPLVTDRPTIIFGADVTHPHPGEDSSPSIAAVS 81
Score = 44.6 bits (91), Expect = 0.002
Identities = 23/50 (46%), Positives = 28/50 (56%)
Frame = -2 / +1
Query: 183 ELTTAATEGLSCPG*PCETSIPKMMVGTCDTCGIDEDASTCSNEFRPPSF 34
+LT A LS PG* TS P MMVG T G+ D ++ S F PP+F
Sbjct: 79 QLTAAMEGLLSSPG*GWVTSAPNMMVGLSVTKGMRLDTASASTVFLPPTF 228
>gb|CW358043.1|CW358043 fsbb001f024p12k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f024p12, DNA
sequence
Length = 774
Score = 54.7 bits (113), Expect = 2e-006
Identities = 24/50 (48%), Positives = 31/50 (62%)
Frame = +2 / +3
Query: 32 AKLGGLNSLLQVEASSSIPHVSQVPTIILGMDVSHGHPGQDRPSVAAVVS 181
+K+GG N++L S IP V+ PTII G DV+H HPG+D A VS
Sbjct: 564 SKVGGRNTVLADAVSRRIPLVTDRPTIIFGADVTHPHPGEDSSPSIAAVS 713
Score = 44.6 bits (91), Expect = 0.002
Identities = 23/50 (46%), Positives = 28/50 (56%)
Frame = -2 / -3
Query: 183 ELTTAATEGLSCPG*PCETSIPKMMVGTCDTCGIDEDASTCSNEFRPPSF 34
+LT A LS PG* TS P MMVG T G+ D ++ S F PP+F
Sbjct: 715 QLTAAMEGLLSSPG*GWVTSAPNMMVGLSVTKGMRLDTASASTVFLPPTF 566
>gb|CW362575.1|CW362575 fsbb001f033k24f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f033k24, DNA
sequence
Length = 620
Score = 54.7 bits (113), Expect = 2e-006
Identities = 24/50 (48%), Positives = 31/50 (62%)
Frame = +2 / -3
Query: 32 AKLGGLNSLLQVEASSSIPHVSQVPTIILGMDVSHGHPGQDRPSVAAVVS 181
+K+GG N++L S IP V+ PTII G DV+H HPG+D A VS
Sbjct: 471 SKVGGRNTVLADAVSRRIPLVTDRPTIIFGADVTHPHPGEDSSPSIAAVS 322
Score = 44.6 bits (91), Expect = 0.002
Identities = 23/50 (46%), Positives = 28/50 (56%)
Frame = -2 / +2
Query: 183 ELTTAATEGLSCPG*PCETSIPKMMVGTCDTCGIDEDASTCSNEFRPPSF 34
+LT A LS PG* TS P MMVG T G+ D ++ S F PP+F
Sbjct: 320 QLTAAMEGLLSSPG*GWVTSAPNMMVGLSVTKGMRLDTASASTVFLPPTF 469
>gb|CW392215.1|CW392215 fsbb001f078l18k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f078l18, DNA
sequence
Length = 736
Score = 54.7 bits (113), Expect = 2e-006
Identities = 24/50 (48%), Positives = 31/50 (62%)
Frame = +2 / -2
Query: 32 AKLGGLNSLLQVEASSSIPHVSQVPTIILGMDVSHGHPGQDRPSVAAVVS 181
+K+GG N++L S IP V+ PTII G DV+H HPG+D A VS
Sbjct: 306 SKVGGRNTVLADAVSRRIPLVTDRPTIIFGADVTHPHPGEDSSPSIAAVS 157
Score = 44.6 bits (91), Expect = 0.002
Identities = 23/50 (46%), Positives = 28/50 (56%)
Frame = -2 / +2
Query: 183 ELTTAATEGLSCPG*PCETSIPKMMVGTCDTCGIDEDASTCSNEFRPPSF 34
+LT A LS PG* TS P MMVG T G+ D ++ S F PP+F
Sbjct: 155 QLTAAMEGLLSSPG*GWVTSAPNMMVGLSVTKGMRLDTASASTVFLPPTF 304
>gb|CW433903.1|CW433903 fsbb001f149f13k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f149f13, DNA
sequence
Length = 802
Score = 54.7 bits (113), Expect = 2e-006
Identities = 24/50 (48%), Positives = 31/50 (62%)
Frame = +2 / -3
Query: 32 AKLGGLNSLLQVEASSSIPHVSQVPTIILGMDVSHGHPGQDRPSVAAVVS 181
+K+GG N++L S IP V+ PTII G DV+H HPG+D A VS
Sbjct: 281 SKVGGRNTVLADAVSRRIPLVTDRPTIIFGADVTHPHPGEDSSPSIAAVS 132
Score = 44.6 bits (91), Expect = 0.002
Identities = 23/50 (46%), Positives = 28/50 (56%)
Frame = -2 / +1
Query: 183 ELTTAATEGLSCPG*PCETSIPKMMVGTCDTCGIDEDASTCSNEFRPPSF 34
+LT A LS PG* TS P MMVG T G+ D ++ S F PP+F
Sbjct: 130 QLTAAMEGLLSSPG*GWVTSAPNMMVGLSVTKGMRLDTASASTVFLPPTF 279
>gb|CW449999.1|CW449999 fsbb001f188g17f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f188g17, DNA
sequence
Length = 628
Score = 54.7 bits (113), Expect = 2e-006
Identities = 24/50 (48%), Positives = 31/50 (62%)
Frame = +2 / +1
Query: 32 AKLGGLNSLLQVEASSSIPHVSQVPTIILGMDVSHGHPGQDRPSVAAVVS 181
+K+GG N++L S IP V+ PTII G DV+H HPG+D A VS
Sbjct: 202 SKVGGRNTVLADAVSRRIPLVTDRPTIIFGADVTHPHPGEDSSPSIAAVS 351
Score = 44.6 bits (91), Expect = 0.002
Identities = 23/50 (46%), Positives = 28/50 (56%)
Frame = -2 / -3
Query: 183 ELTTAATEGLSCPG*PCETSIPKMMVGTCDTCGIDEDASTCSNEFRPPSF 34
+LT A LS PG* TS P MMVG T G+ D ++ S F PP+F
Sbjct: 353 QLTAAMEGLLSSPG*GWVTSAPNMMVGLSVTKGMRLDTASASTVFLPPTF 204
>gb|BG051562.1|BG051562 FM1_58_A07.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 360
Score = 54.7 bits (113), Expect = 2e-006
Identities = 22/23 (95%), Positives = 22/23 (95%)
Frame = +2 / +1
Query: 647 LHDEIGFSADEMQEFVHSLSYVY 715
L DEIGFSADEMQEFVHSLSYVY
Sbjct: 1 LQDEIGFSADEMQEFVHSLSYVY 69
Score = 50.1 bits (103), Expect = 4e-005
Identities = 21/22 (95%), Positives = 22/22 (100%)
Frame = -2 / -2
Query: 714 YT*DSE*TNSCISSAEKPISSC 649
YT*+SE*TNSCISSAEKPISSC
Sbjct: 68 YT*ESE*TNSCISSAEKPISSC 3
Score = 44.1 bits (90), Expect = 0.002
Identities = 16/23 (69%), Positives = 20/23 (86%)
Frame = -1 / -1
Query: 715 VHVR*RMNKLLHLVCRETYLVVQ 647
+H+R RMNKLLH V RETYL++Q
Sbjct: 69 IHIRERMNKLLHFVSRETYLILQ 1
Score = 38.2 bits (77), Expect = 0.14
Identities = 16/22 (72%), Positives = 17/22 (77%)
Frame = +3 / +2
Query: 648 CTTR*VSLQTRCRSLFIRYLTC 713
C R*VSL T+CRSLFIR L C
Sbjct: 2 CRMR*VSLLTKCRSLFIRSLMC 67
Score = 37.7 bits (76), Expect = 0.19
Identities = 15/19 (78%), Positives = 17/19 (89%)
Frame = +1 / +3
Query: 658 DRFLCRRDAGVCSFAILRV 714
DRFLC R+AGVCSFA+L V
Sbjct: 12 DRFLC*RNAGVCSFALLCV 68
Score = 35.0 bits (70), Expect = 1.3
Identities = 16/22 (72%), Positives = 16/22 (72%)
Frame = -3 / -3
Query: 713 TRKIANEQTPASRLQRNLSRRA 648
T K ANEQTPA R QRNLS A
Sbjct: 67 THKRANEQTPAFRQQRNLSHPA 2
>gb|CW478346.1|CW478346 fsbb001f236c23k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f236c23, DNA
sequence
Length = 787
Score = 31.8 bits (63), Expect(3) = 7e-006
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +2 / +1
Query: 461 PKFTVIVAQKNHHTKFF 511
PK T IV QK HHT+ F
Sbjct: 691 PKITFIVVQKKHHTRLF 741
Score = 31.8 bits (63), Expect(3) = 7e-006
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +2 / +2
Query: 341 KPEHIIIFRDGVSESQFTQVINIELDQI 424
KP RDGVSE QF QV+ E+ +I
Sbjct: 488 KPTPSSTVRDGVSEGQFKQVLEQEIPEI 571
Score = 26.7 bits (52), Expect(3) = 7e-006
Identities = 15/31 (48%), Positives = 16/31 (51%)
Frame = +2 / +3
Query: 92 VSQVPTIILGMDVSHGHPGQDRPSVAAVVSS 184
VS PTII G DV+H D A VSS
Sbjct: 6 VSIEPTIIFGADVTHPAALDDTAPSIASVSS 98
>gb|BZ346558.1|BZ346558 hv20d11.b1 WGS-SbicolorF (JM107 adapted methyl filtered) Sorghum
bicolor genomic clone hv20d11 5', DNA sequence
Length = 714
Score = 39.1 bits (79), Expect(2) = 8e-006
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +2 / -1
Query: 431 ACKFLDEKWSPKFTVIVAQKNHHTKFF 511
AC L+ ++ PK T +V QK HHT+ F
Sbjct: 177 ACASLEAEYQPKVTFVVVQKRHHTRLF 97
Score = 31.3 bits (62), Expect(2) = 8e-006
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = +2 / -2
Query: 356 IIFRDGVSESQFTQVINIELDQI 424
++ RDGVSE QF QV+ EL+ I
Sbjct: 326 LLVRDGVSEGQFYQVLLYELNAI 258
Score = 28.1 bits (55), Expect(2) = 1.2
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = -1 / +3
Query: 430 LDDLIQLNVDDLGKLTFTDSIPE 362
L D I+L +L KL+FTD+IP+
Sbjct: 252 LSDSIELIQQNLIKLSFTDTIPD 320
Score = 24.4 bits (47), Expect(2) = 1.2
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = -2 / +2
Query: 507 NLVWWFF*ATITVNLGDHFSSRNLHA 430
NLV W F* T V G + +SR A
Sbjct: 101 NLV*WRF*TTTKVTFGWYSASREAQA 178
>gb|CW099173.1|CW099173 104_466_11003407_116_34382_032 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11003407, DNA
sequence
Length = 659
Score = 39.1 bits (79), Expect(2) = 8e-006
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +2 / +3
Query: 431 ACKFLDEKWSPKFTVIVAQKNHHTKFF 511
AC L+ ++ PK T +V QK HHT+ F
Sbjct: 576 ACASLEAEYQPKVTFVVVQKRHHTRLF 656
Score = 31.3 bits (62), Expect(2) = 8e-006
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = +2 / +1
Query: 356 IIFRDGVSESQFTQVINIELDQI 424
++ RDGVSE QF QV+ EL+ I
Sbjct: 427 LLVRDGVSEGQFYQVLLYELNAI 495
Score = 28.1 bits (55), Expect(2) = 1.2
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = -1 / -3
Query: 430 LDDLIQLNVDDLGKLTFTDSIPE 362
L D I+L +L KL+FTD+IP+
Sbjct: 501 LSDSIELIQQNLIKLSFTDTIPD 433
Score = 24.4 bits (47), Expect(2) = 1.2
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = -2 / -2
Query: 507 NLVWWFF*ATITVNLGDHFSSRNLHA 430
NLV W F* T V G + +SR A
Sbjct: 652 NLV*WRF*TTTKVTFGWYSASREAQA 575
>gb|CW178748.1|CW178748 104_592_11159733_148_36618_085 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11159733, DNA
sequence
Length = 703
Score = 51.0 bits (105), Expect = 2e-005
Identities = 19/31 (61%), Positives = 23/31 (74%)
Frame = +2 / -3
Query: 617 GTTRPTHYHVLHDEIGFSADEMQEFVHSLSY 709
GT+RP HYHVL DE GFSAD +Q ++L Y
Sbjct: 515 GTSRPAHYHVLMDENGFSADALQTLTYNLCY 423
>gb|CW468737.1|CW468737 fsbb001f221b11k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f221b11, DNA
sequence
Length = 686
Score = 51.0 bits (105), Expect = 2e-005
Identities = 19/31 (61%), Positives = 23/31 (74%)
Frame = +2 / +2
Query: 617 GTTRPTHYHVLHDEIGFSADEMQEFVHSLSY 709
GT+RP HYHVL DE GFSAD +Q ++L Y
Sbjct: 125 GTSRPAHYHVLMDENGFSADALQTLTYNLCY 217
>gb|CW380871.1|CW380871 fsbb001f061o24k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f061o24, DNA
sequence
Length = 586
Score = 35.4 bits (71), Expect(3) = 2e-005
Identities = 16/34 (47%), Positives = 20/34 (58%)
Frame = +2 / +1
Query: 290 GLIRESLIDFYTSSGKRKPEHIIIFRDGVSESQF 391
G I LI + + KP+ II FRDGVS+ QF
Sbjct: 478 GEICLELIGVFVKINRVKPQKIIYFRDGVSDGQF 579
Score = 29.9 bits (59), Expect(3) = 2e-005
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +2 / +1
Query: 2 YLLNLLMKINAKLGGLN 52
Y+ NL +KIN KLGG N
Sbjct: 226 YMTNLALKINGKLGGSN 276
Score = 22.1 bits (42), Expect(3) = 2e-005
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = +2 / +1
Query: 104 PTIILGMDVSHGHPG 148
P + +G DV+H PG
Sbjct: 319 PFMFIGADVNHPSPG 363
>gb|CW163008.1|CW163008 104_570_11151237_116_36445_087 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11151237, DNA
sequence
Length = 715
Score = 50.6 bits (104), Expect = 3e-005
Identities = 19/31 (61%), Positives = 23/31 (74%)
Frame = +2 / +1
Query: 617 GTTRPTHYHVLHDEIGFSADEMQEFVHSLSY 709
GT+RP HYHVL DE FSADE+Q ++L Y
Sbjct: 121 GTSRPAHYHVLWDENNFSADELQTLTNNLCY 213
>gb|CW301269.1|CW301269 104_785_11464112_148_36268_032 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11464112, DNA
sequence
Length = 603
Score = 50.6 bits (104), Expect = 3e-005
Identities = 19/31 (61%), Positives = 23/31 (74%)
Frame = +2 / +3
Query: 617 GTTRPTHYHVLHDEIGFSADEMQEFVHSLSY 709
GT+RP HYHVL DE FSADE+Q ++L Y
Sbjct: 9 GTSRPAHYHVLWDENNFSADELQTLTNNLCY 101
>gb|CL162485.1|CL162485 104_354_10806435_116_31831_339 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10806435, DNA
sequence
Length = 719
Score = 50.1 bits (103), Expect = 4e-005
Identities = 19/31 (61%), Positives = 24/31 (77%)
Frame = +2 / +1
Query: 617 GTTRPTHYHVLHDEIGFSADEMQEFVHSLSY 709
GT+RPTHYHVL+DE FSAD +Q ++L Y
Sbjct: 37 GTSRPTHYHVLYDENRFSADALQFLTNNLCY 129
Score = 32.2 bits (64), Expect = 8.7
Identities = 16/24 (66%), Positives = 19/24 (79%)
Frame = -2 / -1
Query: 687 SCISSAEKPISSCRT**WVGLVVP 616
+C +SAEK SS RT** VGL+VP
Sbjct: 107 NCRASAEKRFSS*RT**CVGLLVP 36
>gb|CF758348.1|CF758348 DSAF1_30_F09.g1_A011 Drought-stressed after flowering Sorghum
bicolor cDNA clone DSAF1_30_F09_A011 3', mRNA sequence
Length = 585
Score = 50.1 bits (103), Expect = 4e-005
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = +2 / +3
Query: 656 EIGFSADEMQEFVHSLSYVY 715
EIGFSADEMQEFVHSLSYVY
Sbjct: 3 EIGFSADEMQEFVHSLSYVY 62
Score = 44.1 bits (90), Expect = 0.002
Identities = 19/20 (95%), Positives = 20/20 (100%)
Frame = -2 / -3
Query: 714 YT*DSE*TNSCISSAEKPIS 655
YT*+SE*TNSCISSAEKPIS
Sbjct: 61 YT*ESE*TNSCISSAEKPIS 2
Score = 40.0 bits (81), Expect = 0.039
Identities = 15/20 (75%), Positives = 17/20 (85%)
Frame = -1 / -2
Query: 715 VHVR*RMNKLLHLVCRETYL 656
+H+R RMNKLLH V RETYL
Sbjct: 62 IHIRERMNKLLHFVSRETYL 3
Score = 37.7 bits (76), Expect = 0.19
Identities = 15/19 (78%), Positives = 17/19 (89%)
Frame = +1 / +2
Query: 658 DRFLCRRDAGVCSFAILRV 714
DRFLC R+AGVCSFA+L V
Sbjct: 5 DRFLC*RNAGVCSFALLCV 61
Score = 35.0 bits (70), Expect = 1.3
Identities = 15/19 (78%), Positives = 16/19 (84%)
Frame = +3 / +1
Query: 657 R*VSLQTRCRSLFIRYLTC 713
R*VSL T+CRSLFIR L C
Sbjct: 4 R*VSLLTKCRSLFIRSLMC 60
Score = 34.1 bits (68), Expect = 2.4
Identities = 15/19 (78%), Positives = 15/19 (78%)
Frame = -3 / -1
Query: 713 TRKIANEQTPASRLQRNLS 657
T K ANEQTPA R QRNLS
Sbjct: 60 THKRANEQTPAFRQQRNLS 4
>gb|BZ366523.1|BZ366523 ic97f02.b1 WGS-SbicolorF (JM107 adapted methyl filtered) Sorghum
bicolor genomic clone ic97f02 5', DNA sequence
Length = 564
Score = 31.8 bits (63), Expect(3) = 5e-005
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +2 / +2
Query: 359 IFRDGVSESQFTQVINIELDQI 424
++RDGVSE QF+ V+ E+D I
Sbjct: 365 LYRDGVSEGQFSHVLLHEMDAI 430
Score = 30.9 bits (61), Expect(3) = 5e-005
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +2 / +3
Query: 179 SSRQWPLISRYRASVHTQSARLEMMSSLF 265
+S WP I++YR V Q R E++ LF
Sbjct: 3 ASMDWPEITKYRGLVSAQPHRQEIIEDLF 89
Score = 23.5 bits (45), Expect(3) = 5e-005
Identities = 9/26 (34%), Positives = 14/26 (53%)
Frame = +2 / +2
Query: 290 GLIRESLIDFYTSSGKRKPEHIIIFR 367
GL+ L+ + R+PE II +R
Sbjct: 212 GLVCRELLIAFRRKTNRRPERIIFYR 289
>gb|BF704780.1|BF704780 FM1_51_D09.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 537
Score = 36.8 bits (74), Expect(2) = 7e-005
Identities = 21/60 (35%), Positives = 28/60 (46%)
Frame = +2 / +1
Query: 2 YLLNLLMKINAKLGGLNSLLQVEASSSIPHVSQVPTIILGMDVSHGHPGQDRPSVAAVVS 181
+L NL +KINAK+GG N L IP V ++ M HP S +VV+
Sbjct: 298 FLANLALKINAKVGGSNVALYNSLPCQIPRVFSDKEPVMFMGADVTHPHPLDDSSPSVVA 477
Score = 30.4 bits (60), Expect(2) = 7e-005
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +2 / +1
Query: 158 PSVAAVVSSRQWPLISRYRASVHTQ 232
PSV AVV+S WP ++Y + + +Q
Sbjct: 463 PSVVAVVASMNWPSANKYISRMRSQ 537
Score = 25.4 bits (49), Expect(2) = 9.5
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +2 / +1
Query: 104 PTIILGMDVSHGHPGQD 154
P + +G DV+H HP D
Sbjct: 406 PVMFMGADVTHPHPLDD 456
Score = 24.0 bits (46), Expect(2) = 9.5
Identities = 5/10 (50%), Positives = 8/10 (80%)
Frame = +1 / +3
Query: 22 EDQCKAWWSE 51
ED+C+ WW +
Sbjct: 318 EDKCEGWWKQ 347
>gb|CW482935.1|CW482935 fsbb001f244e18f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f244e18, DNA
sequence
Length = 758
Score = 48.3 bits (99), Expect = 1e-004
Identities = 18/31 (58%), Positives = 23/31 (74%)
Frame = +2 / +2
Query: 617 GTTRPTHYHVLHDEIGFSADEMQEFVHSLSY 709
GT+RP HYHVL DE F+ADE+Q ++L Y
Sbjct: 8 GTSRPAHYHVLWDENKFTADELQTLTNNLCY 100
>gb|CF770746.1|CF770746 DSBF1_9_B10.g1_A010 Drought-stressed before flowering Sorghum
bicolor cDNA clone DSBF1_9_B10_A010 3', mRNA sequence
Length = 548
Score = 48.3 bits (99), Expect = 1e-004
Identities = 18/33 (54%), Positives = 23/33 (69%)
Frame = +2 / +3
Query: 617 GTTRPTHYHVLHDEIGFSADEMQEFVHSLSYVY 715
GT+RP HYHVL DE F+AD +Q ++L Y Y
Sbjct: 9 GTSRPAHYHVLWDENKFTADGLQTLTNNLCYTY 107
>gb|BG557163.1|BG557163 EM1_43_D03.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 521
Score = 47.3 bits (97), Expect = 2e-004
Identities = 17/44 (38%), Positives = 26/44 (59%)
Frame = +2 / +1
Query: 584 DFYMCAHAGMIGTTRPTHYHVLHDEIGFSADEMQEFVHSLSYVY 715
D ++C+ + G RP Y VL D+ F+ADE+Q ++L Y Y
Sbjct: 1 DLFLCSQVDVKGPRRPVKYLVLRDDNNFTADELQALTNNLCYTY 132
>gb|CW249691.1|CW249691 104_711_11222983_148_35045_022 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11222983, DNA
sequence
Length = 659
Score = 46.0 bits (94), Expect = 6e-004
Identities = 21/48 (43%), Positives = 28/48 (58%)
Frame = +2 / +3
Query: 35 KLGGLNSLLQVEASSSIPHVSQVPTIILGMDVSHGHPGQDRPSVAAVV 178
++GG N++L S IP VS +PTII G DV+H G+D A V
Sbjct: 132 QMGGRNTVLLDAISWRIPLVSDIPTIIFGADVTHPETGEDSSPSIAAV 275
>gb|CW481997.1|CW481997 fsbb001f241n20k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f241n20, DNA
sequence
Length = 601
Score = 38.2 bits (77), Expect(2) = 8e-004
Identities = 15/23 (65%), Positives = 19/23 (82%)
Frame = +2 / +2
Query: 299 RESLIDFYTSSGKRKPEHIIIFR 367
RE L+DFY +S +RKP+ IIIFR
Sbjct: 263 RELLLDFYQTSQQRKPKQIIIFR 331
Score = 27.2 bits (53), Expect(2) = 8e-004
Identities = 10/15 (66%), Positives = 13/15 (86%)
Frame = +2 / +2
Query: 227 TQSARLEMMSSLFKP 271
TQS ++EM+ SLFKP
Sbjct: 17 TQSPKVEMIDSLFKP 61
>gb|CW205366.1|CW205366 104_633_11187029_148_36926_019 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11187029, DNA
sequence
Length = 673
Score = 31.8 bits (63), Expect(2) = 8e-004
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +2 / +1
Query: 461 PKFTVIVAQKNHHTKFF 511
PK T IV QK HHT+ F
Sbjct: 496 PKITFIVVQKRHHTRLF 546
Score = 31.8 bits (63), Expect(2) = 8e-004
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +2 / +2
Query: 341 KPEHIIIFRDGVSESQFTQVINIELDQI 424
KP RDGVSE QF QV+ E+ +I
Sbjct: 293 KPTPSSTVRDGVSEGQFKQVLEQEIPEI 376
>gb|CW248569.1|CW248569 104_710_11222371_148_35033_080 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11222371, DNA
sequence
Length = 647
Score = 44.1 bits (90), Expect = 0.002
Identities = 14/31 (45%), Positives = 25/31 (80%)
Frame = +2 / -2
Query: 623 TRPTHYHVLHDEIGFSADEMQEFVHSLSYVY 715
+RPTHY+ L DE GF +D++Q+ +++L +V+
Sbjct: 646 SRPTHYYSLVDEHGFGSDDLQKLIYNLCFVF 554
>gb|CW096175.1|CW096175 104_461_11001747_116_34332_004 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11001747, DNA
sequence
Length = 380
Score = 43.7 bits (89), Expect = 0.003
Identities = 13/19 (68%), Positives = 16/19 (84%)
Frame = +2 / +3
Query: 542 GTVVDSKVCHPKNFDFYMC 598
GTVVD+ +CHP FDFY+C
Sbjct: 324 GTVVDTSICHPSEFDFYLC 380
>gb|CW128073.1|CW128073 104_509_11113800_116_34745_088 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11113800, DNA
sequence
Length = 626
Score = 43.7 bits (89), Expect = 0.003
Identities = 19/53 (35%), Positives = 31/53 (58%)
Frame = +2 / -2
Query: 38 LGGLNSLLQVEASSSIPHVSQVPTIILGMDVSHGHPGQDRPSVAAVVSSRQWP 196
+GG N++L+ + I ++ +PTII G DV+H PG+D A V + +P
Sbjct: 244 VGGRNTVLEDALNRRIHLLTDLPTIIFGADVTHPAPGEDASPSIAAVCNFSFP 86
>gb|CW302364.1|CW302364 104_786_11464680_148_35667_088 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11464680, DNA
sequence
Length = 620
Score = 43.7 bits (89), Expect = 0.003
Identities = 19/53 (35%), Positives = 31/53 (58%)
Frame = +2 / +1
Query: 38 LGGLNSLLQVEASSSIPHVSQVPTIILGMDVSHGHPGQDRPSVAAVVSSRQWP 196
+GG N++L+ + I ++ +PTII G DV+H PG+D A V + +P
Sbjct: 406 VGGRNTVLEDALNRRIHLLTDLPTIIFGADVTHPAPGEDASPSIAAVCNFSFP 564
>gb|CW435603.1|CW435603 fsbb001f151n10f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f151n10, DNA
sequence
Length = 693
Score = 43.7 bits (89), Expect = 0.003
Identities = 13/20 (65%), Positives = 18/20 (90%)
Frame = +2 / +2
Query: 542 GTVVDSKVCHPKNFDFYMCA 601
GTVVDS++CHP FDF++C+
Sbjct: 377 GTVVDSEICHPAEFDFFLCS 436
>gb|CW197942.1|CW197942 104_622_11181949_116_36825_055 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11181949, DNA
sequence
Length = 696
Score = 31.8 bits (63), Expect(2) = 0.004
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +2 / -2
Query: 341 KPEHIIIFRDGVSESQFTQVINIELDQI 424
KP RDGVSE QF QV+ E+ +I
Sbjct: 116 KPTPSSTVRDGVSEGQFKQVLEQEIPEI 33
Score = 31.3 bits (62), Expect(2) = 0.004
Identities = 17/35 (48%), Positives = 19/35 (54%)
Frame = +2 / -3
Query: 80 SIPHVSQVPTIILGMDVSHGHPGQDRPSVAAVVSS 184
S+P VS PTII G DV+H D A VSS
Sbjct: 610 SLPVVSIEPTIIFGADVTHPAALDDTAPSIASVSS 506
>gb|BG102640.1|BG102640 RHIZ2_35_E02.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 324
Score = 43.2 bits (88), Expect = 0.004
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +2 / +1
Query: 665 FSADEMQEFVHSLSYVY 715
FSADEMQEFVHSLSYVY
Sbjct: 1 FSADEMQEFVHSLSYVY 51
Score = 35.0 bits (70), Expect = 1.3
Identities = 15/16 (93%), Positives = 16/16 (100%)
Frame = -2 / -2
Query: 714 YT*DSE*TNSCISSAE 667
YT*+SE*TNSCISSAE
Sbjct: 50 YT*ESE*TNSCISSAE 3
Score = 32.7 bits (65), Expect = 6.3
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = -1 / -1
Query: 715 VHVR*RMNKLLHLVCRE 665
+H+R RMNKLLH V RE
Sbjct: 51 IHIRERMNKLLHFVSRE 1
>gb|CW051011.1|CW051011 104_291_10514996_115_30196 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10514996, DNA
sequence
Length = 286
Score = 41.8 bits (85), Expect = 0.011
Identities = 18/27 (66%), Positives = 20/27 (74%)
Frame = +2 / -2
Query: 362 FRDGVSESQFTQVINIELDQIIEACKF 442
FRDGVSE +F V+NIEL QIIE F
Sbjct: 180 FRDGVSEGEFKHVLNIELAQIIEVETF 100
Score = 33.6 bits (67), Expect = 3.3
Identities = 14/23 (60%), Positives = 18/23 (78%)
Frame = -1 / +1
Query: 430 LDDLIQLNVDDLGKLTFTDSIPE 362
L+DL QLNV ++ KL T+SIPE
Sbjct: 112 LNDLCQLNVQNMLKLALTNSIPE 180
Score = 32.7 bits (65), Expect = 6.3
Identities = 16/33 (48%), Positives = 21/33 (63%)
Frame = -2 / +2
Query: 459 DHFSSRNLHASMI*SSSMLMTWVN*LSLTPSLK 361
+ + N+ SMI +SSM T +N SLTPSLK
Sbjct: 83 EQITGGNVSTSMICASSMFRTCLNSPSLTPSLK 181
>gb|BZ343186.1|BZ343186 ho35g11.b2 WGS-SbicolorF (JM107 adapted methyl filtered) Sorghum
bicolor genomic clone ho35g11 5', DNA sequence
Length = 611
Score = 39.1 bits (79), Expect = 0.074
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +2 / +1
Query: 38 LGGLNSLLQVEASSSIPHVSQVPTIILGMDVSHGHPG 148
+GG N++L + IP ++ PTI+ G DV+H PG
Sbjct: 499 VGGRNTVLDDALNRRIPLLTDCPTIVFGADVTHPSPG 609
>gb|BF422058.1|BF422058 FM1_12_D07.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 529
Score = 38.6 bits (78), Expect = 0.10
Identities = 14/19 (73%), Positives = 17/19 (89%)
Frame = +2 / +2
Query: 659 IGFSADEMQEFVHSLSYVY 715
IGF+ D++QE VHSLSYVY
Sbjct: 5 IGFNPDDLQELVHSLSYVY 61
>gb|CW046283.1|CW046283 104_283_10510095_115_30139 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10510095, DNA
sequence
Length = 230
Score = 38.2 bits (77), Expect = 0.14
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +2 / +3
Query: 431 ACKFLDEKWSPKFTVIVAQKNHHTKFF 511
AC L E + P+ T +V QK HHT+ F
Sbjct: 3 ACASLQEGYQPRVTFVVVQKRHHTRLF 83
>gb|CW243935.1|CW243935 104_704_11220319_116_37581_022 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11220319, DNA
sequence
Length = 740
Score = 38.2 bits (77), Expect = 0.14
Identities = 17/37 (45%), Positives = 23/37 (62%)
Frame = +2 / +1
Query: 32 AKLGGLNSLLQVEASSSIPHVSQVPTIILGMDVSHGH 142
+K+GG N++L S IP V+ PTII DV+H H
Sbjct: 628 SKVGGRNTVLADAVSRRIPLVTDRPTIIFCADVTHPH 738
>gb|CW478345.1|CW478345 fsbb001f236c23f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f236c23, DNA
sequence
Length = 735
Score = 37.7 bits (76), Expect = 0.19
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = +2 / -1
Query: 632 THYHVLHDEIGFSADEMQEFVHSLSYV 712
THYHVL D+ F+AD +Q ++L Y+
Sbjct: 735 THYHVLRDDNKFTADALQSLTYNLCYL 655
>gb|CW140184.1|CW140184 104_530_11135648_116_34915_022 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11135648, DNA
sequence
Length = 652
Score = 37.3 bits (75), Expect = 0.26
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +2 / -1
Query: 431 ACKFLDEKWSPKFTVIVAQKNHHTKFF 511
AC L+ + P+ T IV QK HHT+ F
Sbjct: 154 ACASLEANYQPQVTFIVVQKRHHTRLF 74
>gb|CW396612.1|CW396612 fsbb001f085c03k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f085c03, DNA
sequence
Length = 752
Score = 37.3 bits (75), Expect = 0.26
Identities = 14/25 (56%), Positives = 18/25 (72%)
Frame = +2 / +3
Query: 635 HYHVLHDEIGFSADEMQEFVHSLSY 709
HYHVL DE F+ADE+Q ++L Y
Sbjct: 3 HYHVLWDENKFTADELQTLTNNLCY 77
>gb|CW450000.1|CW450000 fsbb001f188g17k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f188g17, DNA
sequence
Length = 805
Score = 37.3 bits (75), Expect = 0.26
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +2 / -3
Query: 431 ACKFLDEKWSPKFTVIVAQKNHHTKFF 511
AC L+ + P+ T IV QK HHT+ F
Sbjct: 194 ACASLEANYQPQVTFIVVQKRHHTRLF 114
>gb|BE366757.1|BE366757 PI1_3_G03.g1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 553
Score = 35.4 bits (71), Expect = 0.94
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = +2 / +2
Query: 671 ADEMQEFVHSLSYV 712
ADEMQEFVHSLSYV
Sbjct: 5 ADEMQEFVHSLSYV 46
>gb|CL185413.1|CL185413 104_399_10899512_114_32391_024 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10899512, DNA
sequence
Length = 681
Score = 35.0 bits (70), Expect = 1.3
Identities = 15/21 (71%), Positives = 16/21 (76%)
Frame = +2 / +3
Query: 362 FRDGVSESQFTQVINIELDQI 424
FRDGVSE QF QV+ ELD I
Sbjct: 537 FRDGVSEGQFYQVLLYELDAI 599
>gb|CW194329.1|CW194329 104_617_11180039_116_36785_088 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11180039, DNA
sequence
Length = 539
Score = 35.0 bits (70), Expect = 1.3
Identities = 11/31 (35%), Positives = 24/31 (77%)
Frame = +2 / -3
Query: 623 TRPTHYHVLHDEIGFSADEMQEFVHSLSYVY 715
+RPT + L DE GF++D++Q+ ++++ +V+
Sbjct: 537 SRPTQ*YSLVDEHGFASDDLQKLIYNMCFVF 445
>gb|CW249690.1|CW249690 104_711_11222983_116_35041_022 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11222983, DNA
sequence
Length = 699
Score = 35.0 bits (70), Expect = 1.3
Identities = 15/21 (71%), Positives = 16/21 (76%)
Frame = +2 / -1
Query: 362 FRDGVSESQFTQVINIELDQI 424
FRDGVSE QF QV+ ELD I
Sbjct: 183 FRDGVSEGQFYQVLLYELDAI 121
>gb|CF482822.1|CF482822 POL1_9_H11.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_9_H11_A002 3', mRNA sequence
Length = 515
Score = 35.0 bits (70), Expect = 1.3
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +2 / +1
Query: 638 YHVLHDEIGFSADEMQEFVHSLSYVY 715
YHVL D+ F+AD +Q ++L Y+Y
Sbjct: 1 YHVLRDDNKFTADALQSLTYNLCYLY 78
>gb|BG054168.1|BG054168 OV2_2_B05.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA sequence
Length = 444
Score = 29.9 bits (59), Expect(2) = 1.6
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +2 / +2
Query: 2 YLLNLLMKINAKLGGLN 52
Y+ NL +KIN KLGG N
Sbjct: 293 YMTNLALKINGKLGGSN 343
Score = 22.1 bits (42), Expect(2) = 1.6
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = +2 / +2
Query: 104 PTIILGMDVSHGHPG 148
P + +G DV+H PG
Sbjct: 386 PFMFIGADVNHPSPG 430
>gb|CW411647.1|CW411647 fsbb001f106o17f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f106o17, DNA
sequence
Length = 707
Score = 33.6 bits (67), Expect = 3.3
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = +2 / +1
Query: 77 SSIPHVSQVPTIILGMDVSH 136
+ IP VS VPTII G DV+H
Sbjct: 640 NGIPFVSDVPTIIFGADVTH 699
>gb|BZ330034.1|BZ330034 hv89e08.g1 WGS-SbicolorF (JM107 adapted methyl filtered) Sorghum
bicolor genomic clone hv89e08 5', DNA sequence
Length = 622
Score = 32.7 bits (65), Expect = 6.3
Identities = 12/41 (29%), Positives = 21/41 (51%)
Frame = -3 / +2
Query: 713 TRKIANEQTPASRLQRNLSRRAEHDSGWALLFQSSQHVHTC 591
T IA + +P+SR++R L + WA ++ +H C
Sbjct: 266 THSIALDNSPSSRIERRLVSHLHSTTNWATSLGATIRIHFC 388
>gb|CL190502.1|CL190502 104_408_10906121_114_32485_069 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10906121, DNA
sequence
Length = 599
Score = 32.7 bits (65), Expect = 6.3
Identities = 12/41 (29%), Positives = 21/41 (51%)
Frame = -3 / -3
Query: 713 TRKIANEQTPASRLQRNLSRRAEHDSGWALLFQSSQHVHTC 591
T IA + +P+SR++R L + WA ++ +H C
Sbjct: 321 THSIALDNSPSSRIERRLVSHLHSTTNWATSLGATIRIHFC 199
>gb|CW071775.1|CW071775 104_324_10591753_116_30464 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10591753, DNA
sequence
Length = 694
Score = 32.7 bits (65), Expect = 6.3
Identities = 15/25 (60%), Positives = 16/25 (64%)
Frame = +2 / -1
Query: 95 SQVPTIILGMDVSHGHPGQDRPSVA 169
S PTI LG+ VS GHP R SVA
Sbjct: 541 SSAPTICLGLAVSAGHPLAGRGSVA 467
>gb|CW275217.1|CW275217 104_748_11404844_116_35381_074 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11404844, DNA
sequence
Length = 642
Score = 32.7 bits (65), Expect = 6.3
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = -3 / +2
Query: 353 CVLVFAFQS*CRSRSVIPG*GHHHQYPAA*TTRTSF 246
C+ FQ + SV+PG* +HH++P + T F
Sbjct: 239 CLFPSTFQVLQKQTSVLPG*NNHHEFPRSCLTSFGF 346
>gb|CW297774.1|CW297774 104_780_11462220_116_35647_046 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11462220, DNA
sequence
Length = 615
Score = 32.7 bits (65), Expect = 6.3
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +1 / -1
Query: 472 CDCCSKEPPHQVLSDGITRQCSSWNCGG 555
C CSK+ PHQ + IT CS + GG
Sbjct: 462 CAGCSKQKPHQHIKKMITATCSRLSNGG 379
>gb|CW297775.1|CW297775 104_780_11462220_148_35651_046 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11462220, DNA
sequence
Length = 564
Score = 32.7 bits (65), Expect = 6.3
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +1 / +3
Query: 472 CDCCSKEPPHQVLSDGITRQCSSWNCGG 555
C CSK+ PHQ + IT CS + GG
Sbjct: 327 CAGCSKQKPHQHIKKMITATCSRLSNGG 410
>gb|CW423017.1|CW423017 fsbb001f132j24f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f132j24, DNA
sequence
Length = 586
Score = 32.7 bits (65), Expect = 6.3
Identities = 12/41 (29%), Positives = 21/41 (51%)
Frame = -3 / -3
Query: 713 TRKIANEQTPASRLQRNLSRRAEHDSGWALLFQSSQHVHTC 591
T IA + +P+SR++R L + WA ++ +H C
Sbjct: 560 THSIALDNSPSSRIERRLVSHLHSTTNWATSLGATIRIHFC 438
>gb|CN126550.1|CN126550 RHOH1_17_G08.g1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_17_G08_A002 5', mRNA sequence
Length = 892
Score = 26.3 bits (51), Expect(2) = 6.8
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = -1 / +1
Query: 700 RMNKLLHLVCRETYLVVQNMIVGGPCCSNHP 608
R +HL+CR +L+ + GG CS+ P
Sbjct: 253 RHTSSVHLLCRSQWLL*IHNRAGGGRCSSKP 345
Score = 23.5 bits (45), Expect(2) = 6.8
Identities = 6/10 (60%), Positives = 10/10 (100%)
Frame = -1 / +2
Query: 553 HHSSRKNIVW 524
+HSS++N+VW
Sbjct: 341 NHSSKRNVVW 370
>gb|CD462983.1|CD462983 ETH1_41_F05.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_41_F05_A002 5', mRNA sequence
Length = 684
Score = 26.3 bits (51), Expect(2) = 6.9
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = -1 / +1
Query: 700 RMNKLLHLVCRETYLVVQNMIVGGPCCSNHP 608
R +HL+CR +L+ + GG CS+ P
Sbjct: 268 RHTSSVHLLCRSQWLL*IHNRAGGGRCSSKP 360
Score = 23.5 bits (45), Expect(2) = 6.9
Identities = 6/10 (60%), Positives = 10/10 (100%)
Frame = -1 / +2
Query: 553 HHSSRKNIVW 524
+HSS++N+VW
Sbjct: 356 NHSSKRNVVW 385
>gb|CL153964.1|CL153964 104_338_10781069_114_31369_317 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10781069, DNA
sequence
Length = 571
Score = 32.2 bits (64), Expect = 8.7
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +2 / +1
Query: 269 PRGTDDDGLIRESLIDFYTSSGKRK 343
PRGT G +E L+ T SGKRK
Sbjct: 244 PRGTKRQGSRKEKLVQILTGSGKRK 318
>gb|CW097746.1|CW097746 104_464_11002633_148_34366_015 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11002633, DNA
sequence
Length = 607
Score = 32.2 bits (64), Expect = 8.7
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = +3 / -1
Query: 93 CRKYPPSS*VWMFHMVIQDKIDLRLQRWLVLVNGLLSL 206
C++ PS *V +H+ + LRLQ LV+V+ + SL
Sbjct: 334 CQQRAPSV*VQSYHLQHHTSVQLRLQPVLVIVSTMASL 221
>gb|CW321292.1|CW321292 104_814_11475470_116_35933_053 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11475470, DNA
sequence
Length = 675
Score = 32.2 bits (64), Expect = 8.7
Identities = 15/38 (39%), Positives = 24/38 (63%)
Frame = +3 / +3
Query: 93 CRKYPPSS*VWMFHMVIQDKIDLRLQRWLVLVNGLLSL 206
C++ P S *V +H+ ++LRLQ LV+V+ + SL
Sbjct: 30 CQQRPLSV*VQSYHLQHHTSVELRLQPVLVIVSTMASL 143
>gb|CW372826.1|CW372826 fsbb001f048o13k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f048o13, DNA
sequence
Length = 603
Score = 32.2 bits (64), Expect = 8.7
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -2 / -2
Query: 228 VCTDALYLEIRGH*RELTTAATEGLSCPG*P 136
VC +AL ++I+GH + T GL C G P
Sbjct: 245 VCEEALIVDIKGHVLHNIASLTRGLRCVGGP 153
>gb|CL703892.2|CL703892 SP__Bb0007I12.r SP__Bb Sorghum propinquum genomic clone
SP__Bb0007I12 3', DNA sequence
Length = 624
Score = 32.2 bits (64), Expect = 8.7
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +2 / +1
Query: 116 LGMDVSHGHPGQDRPSVAAVVSSRQWPLISRY 211
LG V+ G+PG PSV++ SS W RY
Sbjct: 7 LGGSVTRGNPGYRWPSVSSESSSHAWISFGRY 102
>gb|CL704627.2|CL704627 SP__Bb0024B11.r SP__Bb Sorghum propinquum genomic clone
SP__Bb0024B11 3', DNA sequence
Length = 624
Score = 32.2 bits (64), Expect = 8.7
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +2 / +1
Query: 116 LGMDVSHGHPGQDRPSVAAVVSSRQWPLISRY 211
LG V+ G+PG PSV++ SS W RY
Sbjct: 7 LGGSVTRGNPGYRWPSVSSESSSHAWISFGRY 102
>gb|CN134542.1|CN134542 OX1_27_B04.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_27_B04_A002 3', mRNA sequence
Length = 838
Score = 32.2 bits (64), Expect = 8.7
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = -2 / +2
Query: 411 SMLMTWVN*LSLTPSLKIIMCSGF 340
S L+TW + SL P+L +I C GF
Sbjct: 209 SALLTWQHIASLPPNLPVIYCGGF 280
Database: Sorghum_nucl_with_EST.fasta
Posted date: May 2, 2006 3:37 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,014,861,001
Number of Sequences: 832831
Number of extensions: 15802671
Number of successful extensions: 90197
Number of sequences better than 10.0: 196
length of database: 163,786,556
effective HSP length: 54
effective length of database: 118,813,682
effective search space used: 21742903806
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)