TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 131537.2.49
(1833 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CW120089.1|CW120089 104_497_11109126_116_34641_025 Sorgh... 198 e-100
gb|CL180079.1|CL180079 104_389_10895747_148_31907_275 Sorgh... 286 1e-098
gb|CW493527.1|CW493527 fsbb001f284f10f0 Sorghum methylation... 198 1e-097
gb|CF489098.1|CF489098 POL1_54_H12.b1_A002 Pollen Sorghum b... 198 2e-081
gb|CW386731.1|CW386731 fsbb001f070m10k0 Sorghum methylation... 157 2e-076
gb|CW048230.1|CW048230 104_286_10513235_114_30214 Sorghum m... 286 5e-076
gb|CX607063.1|CX607063 ANR1_6_B05.g1_A002 Anaerobic roots S... 193 8e-057
gb|CX610420.1|CX610420 ANR1_18_D02.g1_A002 Anaerobic roots ... 193 9e-057
gb|CL152064.1|CL152064 104_335_10779694_116_31364_094 Sorgh... 193 3e-056
gb|CW155044.1|CW155044 104_557_11145924_148_36361_042 Sorgh... 193 3e-056
gb|CX606979.1|CX606979 ANR1_6_B05.b1_A002 Anaerobic roots S... 193 4e-056
gb|CD213713.1|CD213713 HS1_52_G12.g1_A012 Heat-shocked seed... 190 9e-056
gb|CW155043.1|CW155043 104_557_11145924_116_36362_042 Sorgh... 193 4e-055
gb|CL180078.1|CL180078 104_389_10895747_116_31908_275 Sorgh... 198 5e-054
gb|CW048231.1|CW048231 104_286_10513235_115_30215 Sorghum m... 198 5e-054
gb|CW498136.1|CW498136 fsbb001f291d19k0 Sorghum methylation... 198 5e-054
gb|CD213618.1|CD213618 HS1_52_G12.b1_A012 Heat-shocked seed... 190 1e-053
gb|CW410847.1|CW410847 fsbb001f105m09f0 Sorghum methylation... 183 2e-053
gb|CF431776.1|CF431776 NIT1_9_B03.b1_A002 Nitrogen-deficien... 183 2e-053
gb|CD462726.1|CD462726 ETH1_39_B03.g1_A002 Ethylene-treated... 193 8e-051
gb|BZ341857.1|BZ341857 ic79b05.g1 WGS-SbicolorF (JM107 adap... 193 9e-051
gb|CN128032.1|CN128032 RHOH1_26_C09.g1_A002 Acid- and alkal... 151 2e-050
gb|CW410848.1|CW410848 fsbb001f105m09k0 Sorghum methylation... 191 9e-050
gb|CN135888.1|CN135888 OX1_39_C03.g1_A002 Oxidatively-stres... 151 2e-049
gb|BZ349181.1|BZ349181 hq88a09.g1 WGS-SbicolorF (JM107 adap... 164 2e-049
gb|BF480763.1|BF480763 FM1_14_F11.g1_A003 Floral-Induced Me... 191 3e-048
gb|CW197068.1|CW197068 104_621_11181494_116_36824_059 Sorgh... 159 3e-047
gb|CW093545.1|CW093545 104_456_10999840_114_33066_052 Sorgh... 155 4e-046
gb|BE357369.1|BE357369 DG1_148_A05.g1_A002 Dark Grown 1 (DG... 186 1e-045
gb|CW306661.1|CW306661 104_792_11466961_148_35713_007 Sorgh... 184 3e-045
gb|CD432572.1|CD432572 ETH1_30_E04.g1_A002 Ethylene-treated... 184 3e-045
gb|CX607662.1|CX607662 ANR1_30_B07.b1_A002 Anaerobic roots ... 184 3e-045
gb|CN151138.1|CN151138 WOUND1_73_D06.g1_A002 Wounded leaves... 89 3e-045
gb|CF431835.1|CF431835 NIT1_9_B03.g1_A002 Nitrogen-deficien... 155 5e-045
gb|CN130340.1|CN130340 RHOH1_40_G09.g1_A002 Acid- and alkal... 151 7e-045
gb|CW188377.1|CW188377 104_608_11172997_148_36734_061 Sorgh... 183 8e-045
gb|AI724242.1|AI724242 RHIZ1_8_B12.y2_A001 Rhizome1 (RHIZ1)... 182 1e-044
gb|CX607748.1|CX607748 ANR1_30_B07.g1_A002 Anaerobic roots ... 182 1e-044
gb|CW128767.1|CW128767 104_510_11114194_148_34755_039 Sorgh... 182 1e-044
gb|AI723845.1|AI723845 RHIZ1_28_B06.y1_A001 Rhizome1 (RHIZ1... 182 1e-044
gb|BG240440.1|BG240440 OV1_30_A12.b1_A002 Ovary 1 (OV1) Sor... 182 1e-044
gb|BG488106.1|BG488106 RHIZ2_63_D10.g1_A003 Rhizome2 (RHIZ2... 182 1e-044
gb|BG488416.1|BG488416 RHIZ2_63_D10.b1_A003 Rhizome2 (RHIZ2... 182 1e-044
gb|CW105327.1|CW105327 104_474_11012845_116_34450_053 Sorgh... 182 2e-044
gb|CW361905.1|CW361905 fsbb001f030l13f0 Sorghum methylation... 181 3e-044
gb|CW129063.1|CW129063 104_511_11114353_148_34760_015 Sorgh... 181 4e-044
gb|CW182557.1|CW182557 104_598_11164141_116_36663_061 Sorgh... 181 4e-044
gb|CW297850.1|CW297850 104_780_11462260_116_35647_012 Sorgh... 181 4e-044
gb|CW317075.1|CW317075 104_808_11473223_116_35851_084 Sorgh... 181 4e-044
gb|CW319235.1|CW319235 104_811_11474377_148_35884_003 Sorgh... 181 4e-044
gb|CW417908.1|CW417908 fsbb001f121c05f0 Sorghum methylation... 181 4e-044
gb|AW564395.1|AW564395 LG1_292_F12.b1_A002 Light Grown 1 (L... 181 4e-044
gb|AW680031.1|AW680031 WS1_34_A02.g1_A002 Water-stressed 1 ... 181 4e-044
gb|BE355360.1|BE355360 DG1_114_A03.b1_A002 Dark Grown 1 (DG... 181 4e-044
gb|BE355526.1|BE355526 DG1_114_A03.g1_A002 Dark Grown 1 (DG... 181 4e-044
gb|BE593143.1|BE593143 WS1_98_A10.g1_A002 Water-stressed 1 ... 181 4e-044
gb|BE917707.1|BE917707 OV1_6_B04.b1_A002 Ovary 1 (OV1) Sorg... 181 4e-044
gb|BF481909.1|BF481909 FM1_22_H04.g1_A003 Floral-Induced Me... 181 4e-044
gb|BF656458.1|BF656458 FM1_50_B08.g1_A003 Floral-Induced Me... 181 4e-044
gb|BF704683.1|BF704683 FM1_50_B08.b1_A003 Floral-Induced Me... 181 4e-044
gb|BG049237.1|BG049237 OV1_17_D01.g1_A002 Ovary 1 (OV1) Sor... 181 4e-044
gb|BG052252.1|BG052252 RHIZ2_12_B05.g1_A003 Rhizome2 (RHIZ2... 181 4e-044
gb|BG102543.1|BG102543 RHIZ2_34_D04.g1_A003 Rhizome2 (RHIZ2... 181 4e-044
gb|BG410872.1|BG410872 EM1_27_A01.g1_A002 Embryo 1 (EM1) So... 181 4e-044
gb|CD431873.1|CD431873 ETH1_11_A02.g1_A002 Ethylene-treated... 181 4e-044
gb|CF071535.1|CF071535 FE1_17_C03.b1_A002 Iron-deficient se... 181 4e-044
gb|CN150853.1|CN150853 WOUND1_71_G11.g1_A002 Wounded leaves... 181 4e-044
gb|CW191309.1|CW191309 104_613_11178426_116_36942_075 Sorgh... 180 5e-044
gb|AI724175.1|AI724175 RHIZ1_8_A04.y2_A001 Rhizome1 (RHIZ1)... 180 5e-044
gb|BE592378.1|BE592378 WS1_94_A05.g1_A002 Water-stressed 1 ... 180 5e-044
gb|CW394994.1|CW394994 fsbb001f082n15f0 Sorghum methylation... 180 7e-044
gb|CF072752.1|CF072752 FE1_25_E07.g1_A002 Iron-deficient se... 179 1e-043
gb|CX608442.1|CX608442 ANR1_38_D08.g1_A002 Anaerobic roots ... 178 2e-043
gb|CW183462.1|CW183462 104_599_11164629_148_36672_089 Sorgh... 178 3e-043
gb|BE599367.1|BE599367 PI1_88_F07.g1_A002 Pathogen induced ... 178 3e-043
gb|CD464058.1|CD464058 ETH1_48_H05.b1_A002 Ethylene-treated... 178 3e-043
gb|CF071274.1|CF071274 FE1_16_D02.g1_A002 Iron-deficient se... 178 3e-043
gb|CN125957.1|CN125957 RHOH1_14_H01.b1_A002 Acid- and alkal... 177 4e-043
gb|CN126047.1|CN126047 RHOH1_14_H01.g1_A002 Acid- and alkal... 177 4e-043
gb|CW112587.1|CW112587 104_486_11104970_116_34548_007 Sorgh... 177 7e-043
gb|CX618661.1|CX618661 GABR1_40_H11.g1_A002 GA- or brassino... 96 9e-043
gb|CD463130.1|CD463130 ETH1_42_F10.g1_A002 Ethylene-treated... 149 3e-042
gb|CW197069.1|CW197069 104_621_11181494_148_36823_059 Sorgh... 159 5e-041
gb|BF480894.1|BF480894 FM1_14_F11.b1_A003 Floral-Induced Me... 160 2e-040
gb|CW162062.1|CW162062 104_569_11150747_148_36443_044 Sorgh... 134 6e-040
gb|CF074009.1|CF074009 FE1_9_D12.g1_A002 Iron-deficient see... 166 7e-040
gb|BE917630.1|BE917630 OV1_6_B04.g1_A002 Ovary 1 (OV1) Sorg... 158 1e-039
gb|CW302761.1|CW302761 104_787_11464887_116_35676_064 Sorgh... 164 4e-039
gb|CN151048.1|CN151048 WOUND1_73_D06.b1_A002 Wounded leaves... 89 4e-039
gb|BG049096.1|BG049096 OV1_23_C04.g1_A002 Ovary 1 (OV1) Sor... 163 7e-039
gb|CF772707.1|CF772707 DSBF1_38_D05.g1_A010 Drought-stresse... 161 3e-038
gb|CF484983.1|CF484983 POL1_28_F02.g1_A002 Pollen Sorghum b... 160 6e-038
gb|AW286565.1|AW286565 LG1_334_E01.g1_A002 Light Grown 1 (L... 157 4e-037
gb|BG411209.1|BG411209 EM1_27_A01.b1_A002 Embryo 1 (EM1) So... 157 4e-037
gb|BE593453.1|BE593453 WS1_98_A10.b1_A002 Water-stressed 1 ... 157 6e-037
gb|AW745446.1|AW745446 WS1_34_A02.b1_A002 Water-stressed 1 ... 155 2e-036
gb|CX618572.1|CX618572 GABR1_40_H11.b1_A002 GA- or brassino... 84 3e-036
gb|BG357839.1|BG357839 OV2_30_H07.b1_A002 Ovary 2 (OV2) Sor... 153 7e-036
gb|BE599532.1|BE599532 PI1_88_F07.b1_A002 Pathogen induced ... 152 1e-035
gb|CD431130.1|CD431130 ETH1_7_B09.b1_A002 Ethylene-treated ... 152 1e-035
gb|CD431263.1|CD431263 ETH1_7_B09.g1_A002 Ethylene-treated ... 152 1e-035
gb|CN127949.1|CN127949 RHOH1_26_C09.b1_A002 Acid- and alkal... 99 9e-035
gb|CN150769.1|CN150769 WOUND1_71_G11.b1_A002 Wounded leaves... 146 8e-034
gb|CB929035.1|CB929035 ABA1_38_E08.g1_A012 Abscisic acid-tr... 96 8e-033
gb|CW463713.1|CW463713 fsbb001f212i14k0 Sorghum methylation... 143 1e-032
gb|CW432220.1|CW432220 fsbb001f146m24f0 Sorghum methylation... 136 1e-032
gb|BZ330060.1|BZ330060 hv89f11.g1 WGS-SbicolorF (JM107 adap... 108 5e-032
gb|CD429481.1|CD429481 ETH1_4_H11.g1_A002 Ethylene-treated ... 93 5e-032
gb|AI724884.1|AI724884 RHIZ1_30_G03.y3_A001 Rhizome1 (RHIZ1... 139 1e-031
gb|BG357850.1|BG357850 OV2_31_A07.b1_A002 Ovary 2 (OV2) Sor... 139 1e-031
gb|CW088567.1|CW088567 104_433_10948227_116_32575_006 Sorgh... 138 3e-031
gb|CW463246.1|CW463246 fsbb001f211m02f0 Sorghum methylation... 135 1e-030
gb|CW310412.1|CW310412 104_799_11469701_116_37434_021 Sorgh... 96 2e-030
gb|BE599450.1|BE599450 PI1_87_F07.b1_A002 Pathogen induced ... 87 6e-030
gb|BE592516.1|BE592516 WS1_94_A05.b1_A002 Water-stressed 1 ... 129 1e-028
gb|CW191310.1|CW191310 104_613_11178426_148_36941_075 Sorgh... 128 2e-028
gb|BE355445.1|BE355445 DG1_114_A03.b2_A002 Dark Grown 1 (DG... 128 3e-028
gb|CW227292.1|CW227292 104_665_11205338_116_37230_005 Sorgh... 95 3e-028
gb|CD232045.1|CD232045 SS1_31_E02.g1_A012 Salt-stressed see... 79 6e-028
gb|CW306660.1|CW306660 104_792_11466961_116_35709_007 Sorgh... 127 7e-028
gb|BF482021.1|BF482021 FM1_22_H04.b1_A003 Floral-Induced Me... 126 1e-027
gb|CW182558.1|CW182558 104_598_11164141_148_36664_061 Sorgh... 125 3e-027
gb|CW389786.1|CW389786 fsbb001f075c11f0 Sorghum methylation... 124 5e-027
gb|CW394995.1|CW394995 fsbb001f082n15k0 Sorghum methylation... 123 9e-027
gb|CW502025.1|CW502025 fsbb001f298c13f0 Sorghum methylation... 96 1e-026
gb|CW206268.1|CW206268 104_634_11187502_148_36957_081 Sorgh... 96 2e-026
gb|BG357520.1|BG357520 OV2_30_H07.g1_A002 Ovary 2 (OV2) Sor... 73 5e-026
gb|CF434162.1|CF434162 NIT1_32_H03.g1_A002 Nitrogen-deficie... 119 1e-025
gb|CW105328.1|CW105328 104_474_11012845_148_34446_053 Sorgh... 118 2e-025
gb|CW489243.1|CW489243 fsbb001f274b04f0 Sorghum methylation... 83 2e-024
gb|CW204619.1|CW204619 104_632_11186638_148_36923_085 Sorgh... 57 3e-023
gb|CW088569.1|CW088569 104_433_10948227_251_32621_006 Sorgh... 110 9e-023
gb|AI724525.1|AI724525 RHIZ1_37_E01.y1_A001 Rhizome1 (RHIZ1... 89 9e-023
gb|CL170389.1|CL170389 104_371_10813777_116_31791_097 Sorgh... 109 1e-022
gb|CL186013.1|CL186013 104_400_10899928_116_32405_056 Sorgh... 109 1e-022
gb|CW252274.1|CW252274 104_715_11224407_116_35096_060 Sorgh... 109 1e-022
gb|CW278768.1|CW278768 104_753_11406722_116_35426_009 Sorgh... 109 1e-022
gb|CW451874.1|CW451874 fsbb001f192c12k0 Sorghum methylation... 109 2e-022
gb|CD234757.1|CD234757 SS1_17_A05.g1_A012 Salt-stressed see... 106 8e-022
gb|BF656582.1|BF656582 FM1_51_H04.g1_A003 Floral-Induced Me... 99 3e-021
gb|CW233439.1|CW233439 104_686_11213422_116_37376_085 Sorgh... 104 4e-021
>gb|CW120089.1|CW120089 104_497_11109126_116_34641_025 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11109126, DNA
sequence
Length = 676
Score = 198 bits (427), Expect(3) = e-100
Identities = 82/93 (88%), Positives = 87/93 (93%)
Frame = +3 / -2
Query: 570 EEESRVEAGLIHLRSLQKRTGSYFRYTGSLTVPPCTENVVWSVLGKVRQISQDQLQLLKA 749
EEES+VE LIHLRSLQKRTGSYFRYTGSLTVPPCTENVVWSVLGKVRQIS++QLQLLKA
Sbjct: 297 EEESQVEVALIHLRSLQKRTGSYFRYTGSLTVPPCTENVVWSVLGKVRQISKEQLQLLKA 118
Query: 750 PLPGSDARPTQPLNGRTVQFYNPPNSTISFQI* 848
PLPG+D RPTQP NGR VQFYNPP STISFQ+*
Sbjct: 117 PLPGNDYRPTQPTNGRKVQFYNPPGSTISFQM* 19
Score = 174 bits (374), Expect(3) = e-100
Identities = 69/85 (81%), Positives = 75/85 (88%)
Frame = +3 / -1
Query: 267 ATNATLINDGHDITLALEGKVGTVTVNGKAYSFEKLHWHSPSDHTINGQRFPLELHLVHR 446
A ATLINDGHDI L KVGT+TVNGK +S + LHWHSPSDHTINGQRFPLELHLVH+
Sbjct: 676 AVPATLINDGHDIKLEFGSKVGTLTVNGKVFSLDSLHWHSPSDHTINGQRFPLELHLVHK 497
Query: 447 SADGALAVIGILYQLGAPDSFYYQL 521
SADGA+AVIGILYQLGAPDSFYYQ+
Sbjct: 496 SADGAVAVIGILYQLGAPDSFYYQV 422
Score = 161 bits (346), Expect(3) = 4e-082
Identities = 65/79 (82%), Positives = 72/79 (91%)
Frame = -3 / +3
Query: 520 SW**KESGAPSW*RIPMTASAPSALLWTRCSSSGNLWPLMVWSEGECQCSFSKLYALPFT 341
+W**KESGAPSW*R+PMTA+APSALLWTR SSSGNLWPLMVWSEGECQCS S+L LPFT
Sbjct: 423 TW**KESGAPSW*RMPMTATAPSALLWTRWSSSGNLWPLMVWSEGECQCSESRLNTLPFT 602
Query: 340 VTVPTLPSSASVMSWPSLM 284
V VPTL ++S+MSWPSLM
Sbjct: 603 VNVPTLLPNSSLMSWPSLM 659
Score = 151 bits (325), Expect(3) = 4e-082
Identities = 65/82 (79%), Positives = 68/82 (82%)
Frame = -3 / +2
Query: 844 IWKEMVLLGGL*NWTVLPLSGCVGRASLPGSGALSSCSWSWLIWRTLPRTLQTTFSVHGG 665
IW EMVL GGL*NWT LPL GCVGR S PGSGALSSCS S LI T P TLQTTFSV GG
Sbjct: 23 IWNEMVLPGGL*NWTFLPLVGCVGR*SFPGSGALSSCSCSLLICLTFPSTLQTTFSVQGG 202
Query: 664 TVREPV*RK*LPVRFCSERRWM 599
TVR+PV RK*LPVRFCS+RRW+
Sbjct: 203 TVRDPVYRK*LPVRFCSDRRWI 268
Score = 118 bits (252), Expect(2) = 2e-051
Identities = 60/95 (63%), Positives = 64/95 (67%)
Frame = -2 / +1
Query: 854 LVLDLEGDGAVGRVVELDGPAVERLRGARVAPGQRRLEQLQLVLADLAHLAEDAPDDVLG 675
+ L LE DGA RVVELD PAV LRGA V PGQRRLEQLQL+LADL HL + APDDVL
Sbjct: 13 VTLHLE*DGAAWRVVELDFPAVGGLRGAVVVPGQRRLEQLQLLLADLPHLPQHAPDDVLC 192
Query: 674 AWRHXXXXXXXXXXXXALLQRAQVDEAGLHPRLLL 570
A RH ALLQR QVD+ LH RLLL
Sbjct: 193 AGRHGEGPRVPEVASRALLQRPQVDQRHLHLRLLL 297
Score = 111 bits (236), Expect(2) = 2e-051
Identities = 51/70 (72%), Positives = 55/70 (78%)
Frame = -2 / +2
Query: 518 LVVEGVRGAQLVEDPDDRQRAVGAPVDQVQLQREPLAVDGVVGGRVPVQLLEAVRLAVHR 339
LVVE VRGA+LVED DD AVGA VD+V+LQREPLAVDGVVGG VPVQ +EA LAVH
Sbjct: 425 LVVERVRGAELVEDADDGDGAVGALVDEVELQREPLAVDGVVGGGVPVQRIEAEHLAVHC 604
Query: 338 HRPNLALERQ 309
RPN A E Q
Sbjct: 605 QRPNFAAELQ 634
Score = 75.8 bits (159), Expect(4) = 4e-030
Identities = 31/49 (63%), Positives = 31/49 (63%)
Frame = +2 / -3
Query: 329 WDGDGERQGVQXXXXXXXXXXXPHHQRPEVPAGAAPGPQERRRRAGGHR 475
WD D ERQGVQ PHHQRPEVPAGA P PQERRRR HR
Sbjct: 614 WDVDSERQGVQPRFAALALPLRPHHQRPEVPAGAPPRPQERRRRRRRHR 468
Score = 61.1 bits (127), Expect(4) = 4e-030
Identities = 23/29 (79%), Positives = 28/29 (96%)
Frame = +2 / -1
Query: 608 ALAAEAHRQLLPLHGLPHRAAMHRERRLE 694
A+AAEAH +LLP+HG+PHRAA+HRERRLE
Sbjct: 259 AVAAEAHGKLLPVHGVPHRAALHRERRLE 173
Score = 35.9 bits (72), Expect(3) = e-100
Identities = 14/20 (70%), Positives = 18/20 (90%)
Frame = +3 / -2
Query: 516 QLKRQLGEMAQDRCDFAEEE 575
QLKRQL E+A+D+C+ AEEE
Sbjct: 348 QLKRQLVEVAEDKCNSAEEE 289
Score = 34.1 bits (68), Expect(3) = 4e-082
Identities = 16/20 (80%), Positives = 16/20 (80%)
Frame = -2 / +1
Query: 575 LLLGEVAPVLGHLAQLPLQL 516
LLL VA VLGHL QLPLQL
Sbjct: 289 LLLRRVALVLGHLHQLPLQL 348
Score = 33.1 bits (66), Expect(4) = 4e-030
Identities = 11/14 (78%), Positives = 14/14 (100%)
Frame = +2 / -1
Query: 806 VLQPAQQHHLLPDL 847
VLQPA+QHHL+PD+
Sbjct: 61 VLQPARQHHLIPDV 20
Score = 26.7 bits (52), Expect(4) = 4e-030
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +1 / -3
Query: 538 RWPRTGATSPRRRSR 582
RWPRT AT RR R
Sbjct: 326 RWPRTSATRRRRSRR 282
>gb|CL180079.1|CL180079 104_389_10895747_148_31907_275 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10895747, DNA
sequence
Length = 711
Score = 286 bits (620), Expect(3) = 1e-098
Identities = 113/142 (79%), Positives = 124/142 (87%)
Frame = +3 / +3
Query: 96 APVYGYAAGSPNGPENWGKLSPAYKLCGEGKQQSPIDIVTKQAVPAATLDTLNRTYGATN 275
A ++ Y AG P+GPENW KLSPAYK+CG+GKQQSPIDIVTKQAVP A LDTLNRTY A
Sbjct: 57 ATLFSYGAGKPDGPENWAKLSPAYKMCGQGKQQSPIDIVTKQAVPNANLDTLNRTYAAVP 236
Query: 276 ATLINDGHDITLALEGKVGTVTVNGKAYSFEKLHWHSPSDHTINGQRFPLELHLVHRSAD 455
ATLINDGHDI L KVGT+TVNGK +S + LHWHSPSDHTINGQRFPLELHLVH+SAD
Sbjct: 237 ATLINDGHDIKLEFGSKVGTLTVNGKVFSLDSLHWHSPSDHTINGQRFPLELHLVHKSAD 416
Query: 456 GALAVIGILYQLGAPDSFYYQL 521
GA+AVIGILYQLGAPDSFYYQ+
Sbjct: 417 GAVAVIGILYQLGAPDSFYYQV 482
Score = 236 bits (509), Expect(3) = 7e-075
Identities = 97/135 (71%), Positives = 104/135 (77%)
Frame = -3 / -3
Query: 520 SW**KESGAPSW*RIPMTASAPSALLWTRCSSSGNLWPLMVWSEGECQCSFSKLYALPFT 341
+W**KESGAPSW*R+PMTA+APSALLWTR SSSGNLWPLMVWSEGECQCS S+L LPFT
Sbjct: 481 TW**KESGAPSW*RMPMTATAPSALLWTRWSSSGNLWPLMVWSEGECQCSESRLNTLPFT 302
Query: 340 VTVPTLPSSASVMSWPSLMXXXXXXXXXXXXXXXXXAGTACLVTMSIGDCCFPSPHSLYA 161
V VPTL ++S+MSWPSLM GTAC VTMSIGDCCFP PH LYA
Sbjct: 301 VNVPTLLPNSSLMSWPSLMRVAGTAA*VRFRVSRLALGTACFVTMSIGDCCFPCPHILYA 122
Query: 160 GLSFPQFSGPLGLPA 116
GLSF QFSGP G PA
Sbjct: 121 GLSFAQFSGPSGFPA 77
Score = 111 bits (236), Expect(3) = 1e-032
Identities = 51/70 (72%), Positives = 55/70 (78%)
Frame = -2 / -2
Query: 518 LVVEGVRGAQLVEDPDDRQRAVGAPVDQVQLQREPLAVDGVVGGRVPVQLLEAVRLAVHR 339
LVVE VRGA+LVED DD AVGA VD+V+LQREPLAVDGVVGG VPVQ +EA LAVH
Sbjct: 479 LVVERVRGAELVEDADDGDGAVGALVDEVELQREPLAVDGVVGGGVPVQRIEAEHLAVHC 300
Query: 338 HRPNLALERQ 309
RPN A E Q
Sbjct: 299 QRPNFAAELQ 270
Score = 79.9 bits (168), Expect(3) = 1e-098
Identities = 32/35 (91%), Positives = 33/35 (94%)
Frame = +3 / +1
Query: 570 EEESRVEAGLIHLRSLQKRTGSYFRYTGSLTVPPC 674
EEES+VE LIHLRSLQKRTGSYFRYTGSLTVPPC
Sbjct: 607 EEESQVEVALIHLRSLQKRTGSYFRYTGSLTVPPC 711
Score = 75.8 bits (159), Expect(4) = 2e-028
Identities = 31/49 (63%), Positives = 31/49 (63%)
Frame = +2 / +2
Query: 329 WDGDGERQGVQXXXXXXXXXXXPHHQRPEVPAGAAPGPQERRRRAGGHR 475
WD D ERQGVQ PHHQRPEVPAGA P PQERRRR HR
Sbjct: 290 WDVDSERQGVQPRFAALALPLRPHHQRPEVPAGAPPRPQERRRRRRRHR 436
Score = 52.8 bits (109), Expect(3) = 7e-075
Identities = 20/24 (83%), Positives = 23/24 (95%)
Frame = -3 / -2
Query: 670 GGTVREPV*RK*LPVRFCSERRWM 599
GGTVR+PV RK*LPVRFCS+RRW+
Sbjct: 707 GGTVRDPVYRK*LPVRFCSDRRWI 636
Score = 46.4 bits (95), Expect(4) = 2e-028
Identities = 21/27 (77%), Positives = 22/27 (81%)
Frame = +2 / +2
Query: 122 EPQRAGELGEAEPRVQAVRGGEAAVAD 202
E +RAGELGEAEP VQ VR EAAVAD
Sbjct: 83 EARRAGELGEAEPGVQDVRAREAAVAD 163
Score = 45.5 bits (93), Expect(3) = 1e-032
Identities = 20/24 (83%), Positives = 21/24 (87%)
Frame = -1 / -1
Query: 201 SATAASPPRTACTRGSASPSSPAR 130
SATAAS RT+CT GSASPSSPAR
Sbjct: 162 SATAASLARTSCTPGSASPSSPAR 91
Score = 42.3 bits (86), Expect(4) = 2e-028
Identities = 15/22 (68%), Positives = 21/22 (95%)
Frame = +2 / +3
Query: 608 ALAAEAHRQLLPLHGLPHRAAM 673
A+AA+AH +LLP+HG+PHRAA+
Sbjct: 645 AVAAKAHGKLLPVHGVPHRAAL 710
Score = 35.9 bits (72), Expect(3) = 1e-098
Identities = 14/20 (70%), Positives = 18/20 (90%)
Frame = +3 / +1
Query: 516 QLKRQLGEMAQDRCDFAEEE 575
QLKRQL E+A+D+C+ AEEE
Sbjct: 556 QLKRQLVEVAEDKCNSAEEE 615
Score = 34.1 bits (68), Expect(3) = 7e-075
Identities = 16/20 (80%), Positives = 16/20 (80%)
Frame = -2 / -1
Query: 575 LLLGEVAPVLGHLAQLPLQL 516
LLL VA VLGHL QLPLQL
Sbjct: 615 LLLRRVALVLGHLHQLPLQL 556
Score = 30.4 bits (60), Expect(3) = 1e-032
Identities = 17/35 (48%), Positives = 18/35 (51%)
Frame = -2 / -1
Query: 674 AWRHXXXXXXXXXXXXALLQRAQVDEAGLHPRLLL 570
A RH ALLQR QVD+ LH RLLL
Sbjct: 711 AGRHGEGPRVPEVASRALLQRPQVDQRHLHLRLLL 607
Score = 26.7 bits (52), Expect(4) = 2e-028
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +1 / +2
Query: 538 RWPRTGATSPRRRSR 582
RWPRT AT RR R
Sbjct: 578 RWPRTSATRRRRSRR 622
>gb|CW493527.1|CW493527 fsbb001f284f10f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f284f10, DNA
sequence
Length = 706
Score = 198 bits (427), Expect(3) = 1e-097
Identities = 82/93 (88%), Positives = 87/93 (93%)
Frame = +3 / -3
Query: 570 EEESRVEAGLIHLRSLQKRTGSYFRYTGSLTVPPCTENVVWSVLGKVRQISQDQLQLLKA 749
EEES+VE LIHLRSLQKRTGSYFRYTGSLTVPPCTENVVWSVLGKVRQIS++QLQLLKA
Sbjct: 344 EEESQVEVALIHLRSLQKRTGSYFRYTGSLTVPPCTENVVWSVLGKVRQISKEQLQLLKA 165
Query: 750 PLPGSDARPTQPLNGRTVQFYNPPNSTISFQI* 848
PLPG+D RPTQP NGR VQFYNPP STISFQ+*
Sbjct: 164 PLPGNDYRPTQPTNGRKVQFYNPPGSTISFQM* 66
Score = 164 bits (353), Expect(3) = 1e-097
Identities = 64/79 (81%), Positives = 70/79 (88%)
Frame = +3 / -2
Query: 285 INDGHDITLALEGKVGTVTVNGKAYSFEKLHWHSPSDHTINGQRFPLELHLVHRSADGAL 464
I DGHDI L KVGT+TVNGK +S + LHWHSPSDHTINGQRFPLELHLVH+SADGA+
Sbjct: 705 IKDGHDIKLEFGSKVGTLTVNGKVFSLDSLHWHSPSDHTINGQRFPLELHLVHKSADGAV 526
Query: 465 AVIGILYQLGAPDSFYYQL 521
AVIGILYQLGAPDSFYYQ+
Sbjct: 525 AVIGILYQLGAPDSFYYQV 469
Score = 161 bits (346), Expect(3) = 4e-082
Identities = 65/79 (82%), Positives = 72/79 (91%)
Frame = -3 / +2
Query: 520 SW**KESGAPSW*RIPMTASAPSALLWTRCSSSGNLWPLMVWSEGECQCSFSKLYALPFT 341
+W**KESGAPSW*R+PMTA+APSALLWTR SSSGNLWPLMVWSEGECQCS S+L LPFT
Sbjct: 470 TW**KESGAPSW*RMPMTATAPSALLWTRWSSSGNLWPLMVWSEGECQCSESRLNTLPFT 649
Query: 340 VTVPTLPSSASVMSWPSLM 284
V VPTL ++S+MSWPSLM
Sbjct: 650 VNVPTLLPNSSLMSWPSLM 706
Score = 151 bits (325), Expect(3) = 4e-082
Identities = 65/82 (79%), Positives = 68/82 (82%)
Frame = -3 / +1
Query: 844 IWKEMVLLGGL*NWTVLPLSGCVGRASLPGSGALSSCSWSWLIWRTLPRTLQTTFSVHGG 665
IW EMVL GGL*NWT LPL GCVGR S PGSGALSSCS S LI T P TLQTTFSV GG
Sbjct: 70 IWNEMVLPGGL*NWTFLPLVGCVGR*SFPGSGALSSCSCSLLICLTFPSTLQTTFSVQGG 249
Query: 664 TVREPV*RK*LPVRFCSERRWM 599
TVR+PV RK*LPVRFCS+RRW+
Sbjct: 250 TVRDPVYRK*LPVRFCSDRRWI 315
Score = 118 bits (252), Expect(2) = 2e-051
Identities = 60/95 (63%), Positives = 64/95 (67%)
Frame = -2 / +3
Query: 854 LVLDLEGDGAVGRVVELDGPAVERLRGARVAPGQRRLEQLQLVLADLAHLAEDAPDDVLG 675
+ L LE DGA RVVELD PAV LRGA V PGQRRLEQLQL+LADL HL + APDDVL
Sbjct: 60 VTLHLE*DGAAWRVVELDFPAVGGLRGAVVVPGQRRLEQLQLLLADLPHLPQHAPDDVLC 239
Query: 674 AWRHXXXXXXXXXXXXALLQRAQVDEAGLHPRLLL 570
A RH ALLQR QVD+ LH RLLL
Sbjct: 240 AGRHGEGPRVPEVASRALLQRPQVDQRHLHLRLLL 344
Score = 111 bits (236), Expect(2) = 2e-051
Identities = 51/70 (72%), Positives = 55/70 (78%)
Frame = -2 / +1
Query: 518 LVVEGVRGAQLVEDPDDRQRAVGAPVDQVQLQREPLAVDGVVGGRVPVQLLEAVRLAVHR 339
LVVE VRGA+LVED DD AVGA VD+V+LQREPLAVDGVVGG VPVQ +EA LAVH
Sbjct: 472 LVVERVRGAELVEDADDGDGAVGALVDEVELQREPLAVDGVVGGGVPVQRIEAEHLAVHC 651
Query: 338 HRPNLALERQ 309
RPN A E Q
Sbjct: 652 QRPNFAAELQ 681
Score = 75.8 bits (159), Expect(4) = 4e-030
Identities = 31/49 (63%), Positives = 31/49 (63%)
Frame = +2 / -1
Query: 329 WDGDGERQGVQXXXXXXXXXXXPHHQRPEVPAGAAPGPQERRRRAGGHR 475
WD D ERQGVQ PHHQRPEVPAGA P PQERRRR HR
Sbjct: 661 WDVDSERQGVQPRFAALALPLRPHHQRPEVPAGAPPRPQERRRRRRRHR 515
Score = 61.1 bits (127), Expect(4) = 4e-030
Identities = 23/29 (79%), Positives = 28/29 (96%)
Frame = +2 / -2
Query: 608 ALAAEAHRQLLPLHGLPHRAAMHRERRLE 694
A+AAEAH +LLP+HG+PHRAA+HRERRLE
Sbjct: 306 AVAAEAHGKLLPVHGVPHRAALHRERRLE 220
Score = 35.9 bits (72), Expect(3) = 1e-097
Identities = 14/20 (70%), Positives = 18/20 (90%)
Frame = +3 / -3
Query: 516 QLKRQLGEMAQDRCDFAEEE 575
QLKRQL E+A+D+C+ AEEE
Sbjct: 395 QLKRQLVEVAEDKCNSAEEE 336
Score = 34.1 bits (68), Expect(3) = 4e-082
Identities = 16/20 (80%), Positives = 16/20 (80%)
Frame = -2 / +3
Query: 575 LLLGEVAPVLGHLAQLPLQL 516
LLL VA VLGHL QLPLQL
Sbjct: 336 LLLRRVALVLGHLHQLPLQL 395
Score = 33.6 bits (67), Expect(4) = 4e-030
Identities = 12/24 (50%), Positives = 19/24 (79%)
Frame = +2 / -2
Query: 806 VLQPAQQHHLLPDLTLKSTLESLI 877
VLQPA+QHHL+PD+ ++++ I
Sbjct: 108 VLQPARQHHLIPDVM*PNSIDIYI 37
Score = 26.7 bits (52), Expect(4) = 4e-030
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +1 / -1
Query: 538 RWPRTGATSPRRRSR 582
RWPRT AT RR R
Sbjct: 373 RWPRTSATRRRRSRR 329
>gb|CF489098.1|CF489098 POL1_54_H12.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_54_H12_A002 3', mRNA sequence
Length = 598
Score = 198 bits (427), Expect(2) = 2e-081
Identities = 82/93 (88%), Positives = 87/93 (93%)
Frame = +3 / +3
Query: 570 EEESRVEAGLIHLRSLQKRTGSYFRYTGSLTVPPCTENVVWSVLGKVRQISQDQLQLLKA 749
EEES+VE LIHLRSLQKRTGSYFRYTGSLTVPPCTENVVWSVLGKVRQIS++QLQLLKA
Sbjct: 171 EEESQVEVALIHLRSLQKRTGSYFRYTGSLTVPPCTENVVWSVLGKVRQISKEQLQLLKA 350
Query: 750 PLPGSDARPTQPLNGRTVQFYNPPNSTISFQI* 848
PLPG+D RPTQP NGR VQFYNPP STISFQ+*
Sbjct: 351 PLPGNDYRPTQPTNGRKVQFYNPPGSTISFQM* 449
Score = 151 bits (325), Expect(2) = 3e-060
Identities = 65/82 (79%), Positives = 68/82 (82%)
Frame = -3 / -1
Query: 844 IWKEMVLLGGL*NWTVLPLSGCVGRASLPGSGALSSCSWSWLIWRTLPRTLQTTFSVHGG 665
IW EMVL GGL*NWT LPL GCVGR S PGSGALSSCS S LI T P TLQTTFSV GG
Sbjct: 445 IWNEMVLPGGL*NWTFLPLVGCVGR*SFPGSGALSSCSCSLLICLTFPSTLQTTFSVQGG 266
Query: 664 TVREPV*RK*LPVRFCSERRWM 599
TVR+PV RK*LPVRFCS+RRW+
Sbjct: 265 TVRDPVYRK*LPVRFCSDRRWI 200
Score = 127 bits (272), Expect(2) = 2e-081
Identities = 52/59 (88%), Positives = 57/59 (96%)
Frame = +3 / +3
Query: 399 TINGQRFPLELHLVHRSADGALAVIGILYQLGAPDSFYYQLKRQLGEMAQDRCDFAEEE 575
TINGQRFPLELHLVHRSADGA+AVIGILYQLGAPDSFYYQLKRQL E+A+D+C+ AEEE
Sbjct: 3 TINGQRFPLELHLVHRSADGAVAVIGILYQLGAPDSFYYQLKRQLVEVAEDKCNSAEEE 179
Score = 118 bits (252), Expect(2) = 2e-049
Identities = 60/95 (63%), Positives = 64/95 (67%)
Frame = -2 / -3
Query: 854 LVLDLEGDGAVGRVVELDGPAVERLRGARVAPGQRRLEQLQLVLADLAHLAEDAPDDVLG 675
+ L LE DGA RVVELD PAV LRGA V PGQRRLEQLQL+LADL HL + APDDVL
Sbjct: 455 VTLHLE*DGAAWRVVELDFPAVGGLRGAVVVPGQRRLEQLQLLLADLPHLPQHAPDDVLC 276
Query: 674 AWRHXXXXXXXXXXXXALLQRAQVDEAGLHPRLLL 570
A RH ALLQR QVD+ LH RLLL
Sbjct: 275 AGRHGEGPRVPEVASRALLQRPQVDQRHLHLRLLL 171
Score = 103 bits (219), Expect(2) = 3e-060
Identities = 47/59 (79%), Positives = 50/59 (84%)
Frame = -2 / -3
Query: 575 LLLGEVAPVLGHLAQLPLQLVVEGVRGAQLVEDPDDRQRAVGAPVDQVQLQREPLAVDG 399
LLL VA VLGHL QLPLQLVVE VRGA+LVED DD AVGAPVD+V+LQREPLAVDG
Sbjct: 179 LLLRRVALVLGHLHQLPLQLVVERVRGAELVEDADDGDGAVGAPVDEVELQREPLAVDG 3
Score = 100 bits (214), Expect(2) = 2e-049
Identities = 41/45 (91%), Positives = 43/45 (95%)
Frame = -3 / -1
Query: 532 SCRFSW**KESGAPSW*RIPMTASAPSALLWTRCSSSGNLWPLMV 398
SC FSW**KESGAPSW*R+PMTA+APSALLWTR SSSGNLWPLMV
Sbjct: 136 SCLFSW**KESGAPSW*RMPMTATAPSALLWTRWSSSGNLWPLMV 2
Score = 64.8 bits (135), Expect(3) = 2e-026
Identities = 31/62 (50%), Positives = 31/62 (50%)
Frame = +1 / +1
Query: 397 TPSTARGSRWSCTWSTGAPTARWRSSGXXXXXXXXXXXXXXXXXXXXRWPRTGATSPRRR 576
TPSTARGSRWS T STGAPTA SS RWPRT AT RR
Sbjct: 1 TPSTARGSRWSSTSSTGAPTAPSPSSASSTSSAPLTLSTTS*RGSWWRWPRTSATRRRRS 180
Query: 577 SR 582
R
Sbjct: 181 RR 186
Score = 61.1 bits (127), Expect(3) = 2e-026
Identities = 23/29 (79%), Positives = 28/29 (96%)
Frame = +2 / +2
Query: 608 ALAAEAHRQLLPLHGLPHRAAMHRERRLE 694
A+AAEAH +LLP+HG+PHRAA+HRERRLE
Sbjct: 209 AVAAEAHGKLLPVHGVPHRAALHRERRLE 295
Score = 33.6 bits (67), Expect(3) = 2e-026
Identities = 12/24 (50%), Positives = 19/24 (79%)
Frame = +2 / +2
Query: 806 VLQPAQQHHLLPDLTLKSTLESLI 877
VLQPA+QHHL+PD+ ++++ I
Sbjct: 407 VLQPARQHHLIPDVM*PNSIDIYI 478
>gb|CW386731.1|CW386731 fsbb001f070m10k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f070m10, DNA
sequence
Length = 555
Score = 157 bits (337), Expect(3) = 2e-076
Identities = 61/75 (81%), Positives = 67/75 (89%)
Frame = +3 / -1
Query: 297 HDITLALEGKVGTVTVNGKAYSFEKLHWHSPSDHTINGQRFPLELHLVHRSADGALAVIG 476
HDI L KVGT+TVNGK +S + LHWHSPSDHTINGQRFPLELHLVH+SADGA+AVIG
Sbjct: 534 HDIKLEFGSKVGTLTVNGKVFSLDSLHWHSPSDHTINGQRFPLELHLVHKSADGAVAVIG 355
Query: 477 ILYQLGAPDSFYYQL 521
ILYQLGAPDSFYYQ+
Sbjct: 354 ILYQLGAPDSFYYQV 310
Score = 152 bits (326), Expect(3) = 2e-062
Identities = 61/75 (81%), Positives = 68/75 (90%)
Frame = -3 / +2
Query: 520 SW**KESGAPSW*RIPMTASAPSALLWTRCSSSGNLWPLMVWSEGECQCSFSKLYALPFT 341
+W**KESGAPSW*R+PMTA+APSALLWTR SSSGNLWPLMVWSEGECQCS S+L LPFT
Sbjct: 311 TW**KESGAPSW*RMPMTATAPSALLWTRWSSSGNLWPLMVWSEGECQCSESRLNTLPFT 490
Query: 340 VTVPTLPSSASVMSW 296
V VPTL ++S+MSW
Sbjct: 491 VNVPTLLPNSSLMSW 535
Score = 135 bits (289), Expect(3) = 2e-076
Identities = 56/61 (91%), Positives = 59/61 (96%)
Frame = +3 / -2
Query: 570 EEESRVEAGLIHLRSLQKRTGSYFRYTGSLTVPPCTENVVWSVLGKVRQISQDQLQLLKA 749
EEES+VE LIHLRSLQKRTGSYFRYTGSLTVPPCTENVVWSVLGKVRQIS++QLQLLKA
Sbjct: 185 EEESQVEVALIHLRSLQKRTGSYFRYTGSLTVPPCTENVVWSVLGKVRQISKEQLQLLKA 6
Query: 750 P 752
P
Sbjct: 5 P 3
Score = 111 bits (236), Expect(2) = 3e-038
Identities = 51/70 (72%), Positives = 55/70 (78%)
Frame = -2 / +1
Query: 518 LVVEGVRGAQLVEDPDDRQRAVGAPVDQVQLQREPLAVDGVVGGRVPVQLLEAVRLAVHR 339
LVVE VRGA+LVED DD AVGA VD+V+LQREPLAVDGVVGG VPVQ +EA LAVH
Sbjct: 313 LVVERVRGAELVEDADDGDGAVGALVDEVELQREPLAVDGVVGGGVPVQRIEAEHLAVHC 492
Query: 338 HRPNLALERQ 309
RPN A E Q
Sbjct: 493 QRPNFAAELQ 522
Score = 95.0 bits (201), Expect(3) = 2e-062
Identities = 41/52 (78%), Positives = 44/52 (84%)
Frame = -3 / +1
Query: 754 SGALSSCSWSWLIWRTLPRTLQTTFSVHGGTVREPV*RK*LPVRFCSERRWM 599
SGALSSCS S LI T P TLQTTFSV GGTVR+PV RK*LPVRFCS+RRW+
Sbjct: 1 SGALSSCSCSLLICLTFPSTLQTTFSVQGGTVRDPVYRK*LPVRFCSDRRWI 156
Score = 75.8 bits (159), Expect(3) = 5e-026
Identities = 31/49 (63%), Positives = 31/49 (63%)
Frame = +2 / -3
Query: 329 WDGDGERQGVQXXXXXXXXXXXPHHQRPEVPAGAAPGPQERRRRAGGHR 475
WD D ERQGVQ PHHQRPEVPAGA P PQERRRR HR
Sbjct: 502 WDVDSERQGVQPRFAALALPLRPHHQRPEVPAGAPPRPQERRRRRRRHR 356
Score = 73.9 bits (155), Expect(2) = 3e-038
Identities = 37/61 (60%), Positives = 40/61 (65%)
Frame = -2 / +3
Query: 752 RRLEQLQLVLADLAHLAEDAPDDVLGAWRHXXXXXXXXXXXXALLQRAQVDEAGLHPRLL 573
RRLEQLQL+LADL HL + APDDVL A RH ALLQR QVD+ LH RLL
Sbjct: 3 RRLEQLQLLLADLPHLPQHAPDDVLCAGRHGEGPRVPEVASRALLQRPQVDQRHLHLRLL 182
Query: 572 L 570
L
Sbjct: 183 L 185
Score = 61.1 bits (127), Expect(3) = 5e-026
Identities = 23/29 (79%), Positives = 28/29 (96%)
Frame = +2 / -1
Query: 608 ALAAEAHRQLLPLHGLPHRAAMHRERRLE 694
A+AAEAH +LLP+HG+PHRAA+HRERRLE
Sbjct: 147 AVAAEAHGKLLPVHGVPHRAALHRERRLE 61
Score = 35.9 bits (72), Expect(3) = 2e-076
Identities = 14/20 (70%), Positives = 18/20 (90%)
Frame = +3 / -2
Query: 516 QLKRQLGEMAQDRCDFAEEE 575
QLKRQL E+A+D+C+ AEEE
Sbjct: 236 QLKRQLVEVAEDKCNSAEEE 177
Score = 34.1 bits (68), Expect(3) = 2e-062
Identities = 16/20 (80%), Positives = 16/20 (80%)
Frame = -2 / +3
Query: 575 LLLGEVAPVLGHLAQLPLQL 516
LLL VA VLGHL QLPLQL
Sbjct: 177 LLLRRVALVLGHLHQLPLQL 236
Score = 26.7 bits (52), Expect(3) = 5e-026
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +1 / -3
Query: 538 RWPRTGATSPRRRSR 582
RWPRT AT RR R
Sbjct: 214 RWPRTSATRRRRSRR 170
>gb|CW048230.1|CW048230 104_286_10513235_114_30214 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10513235, DNA
sequence
Length = 581
Score = 286 bits (620), Expect = 5e-076
Identities = 113/142 (79%), Positives = 124/142 (87%)
Frame = +3 / +2
Query: 96 APVYGYAAGSPNGPENWGKLSPAYKLCGEGKQQSPIDIVTKQAVPAATLDTLNRTYGATN 275
A ++ Y AG P+GPENW KLSPAYK+CG+GKQQSPIDIVTKQAVP A LDTLNRTY A
Sbjct: 65 ATLFSYGAGKPDGPENWAKLSPAYKMCGQGKQQSPIDIVTKQAVPNANLDTLNRTYAAVP 244
Query: 276 ATLINDGHDITLALEGKVGTVTVNGKAYSFEKLHWHSPSDHTINGQRFPLELHLVHRSAD 455
ATLINDGHDI L KVGT+TVNGK +S + LHWHSPSDHTINGQRFPLELHLVH+SAD
Sbjct: 245 ATLINDGHDIKLEFGSKVGTLTVNGKVFSLDSLHWHSPSDHTINGQRFPLELHLVHKSAD 424
Query: 456 GALAVIGILYQLGAPDSFYYQL 521
GA+AVIGILYQLGAPDSFYYQ+
Sbjct: 425 GAVAVIGILYQLGAPDSFYYQV 490
Score = 236 bits (509), Expect = 1e-060
Identities = 97/135 (71%), Positives = 104/135 (77%)
Frame = -3 / -3
Query: 520 SW**KESGAPSW*RIPMTASAPSALLWTRCSSSGNLWPLMVWSEGECQCSFSKLYALPFT 341
+W**KESGAPSW*R+PMTA+APSALLWTR SSSGNLWPLMVWSEGECQCS S+L LPFT
Sbjct: 489 TW**KESGAPSW*RMPMTATAPSALLWTRWSSSGNLWPLMVWSEGECQCSESRLNTLPFT 310
Query: 340 VTVPTLPSSASVMSWPSLMXXXXXXXXXXXXXXXXXAGTACLVTMSIGDCCFPSPHSLYA 161
V VPTL ++S+MSWPSLM GTAC VTMSIGDCCFP PH LYA
Sbjct: 309 VNVPTLLPNSSLMSWPSLMRVAGTAA*VRFRVSRLALGTACFVTMSIGDCCFPCPHILYA 130
Query: 160 GLSFPQFSGPLGLPA 116
GLSF QFSGP G PA
Sbjct: 129 GLSFAQFSGPSGFPA 85
Score = 111 bits (236), Expect(2) = 9e-031
Identities = 51/70 (72%), Positives = 55/70 (78%)
Frame = -2 / -2
Query: 518 LVVEGVRGAQLVEDPDDRQRAVGAPVDQVQLQREPLAVDGVVGGRVPVQLLEAVRLAVHR 339
LVVE VRGA+LVED DD AVGA VD+V+LQREPLAVDGVVGG VPVQ +EA LAVH
Sbjct: 487 LVVERVRGAELVEDADDGDGAVGALVDEVELQREPLAVDGVVGGGVPVQRIEAEHLAVHC 308
Query: 338 HRPNLALERQ 309
RPN A E Q
Sbjct: 307 QRPNFAAELQ 278
Score = 45.5 bits (93), Expect(2) = 9e-031
Identities = 20/24 (83%), Positives = 21/24 (87%)
Frame = -1 / -1
Query: 201 SATAASPPRTACTRGSASPSSPAR 130
SATAAS RT+CT GSASPSSPAR
Sbjct: 170 SATAASLARTSCTPGSASPSSPAR 99
>gb|CX607063.1|CX607063 ANR1_6_B05.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_6_B05_A002 5', mRNA sequence
Length = 702
Score = 193 bits (416), Expect(4) = 8e-057
Identities = 85/97 (87%), Positives = 86/97 (88%)
Frame = +3 / +1
Query: 1191 VETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFXXXXXXXXXXXRYNKKPTITSRE 1370
VETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIF RYNKKPTITSRE
Sbjct: 253 VETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAAEAAKLARYNKKPTITSRE 432
Query: 1371 IQTSVRLVLPGELAKHAVSEGTKAVTKFTSA*AARPP 1481
IQTSVRLVLPGELAKHAVSEGTKAVTKFTS+*AARPP
Sbjct: 433 IQTSVRLVLPGELAKHAVSEGTKAVTKFTSS*AARPP 543
Score = 165 bits (355), Expect(3) = 5e-048
Identities = 75/97 (77%), Positives = 76/97 (78%)
Frame = -3 / -2
Query: 1480 GGRAA*AEVNLVTALVPSETACLASSPGRTRRTEVWISREVMVGFXXXXXXXXXXXXXXX 1301
GGRAA* EVNLVTALVPSETAC ASSPGRTRRTEVWISREVMVGF
Sbjct: 542 GGRAA*DEVNLVTALVPSETACFASSPGRTRRTEVWISREVMVGFLLYRASLAASAASFS 363
Query: 1300 XXXLMKEFMIDMALEEMPMSGCTCFSTLKM*IL*VST 1190
LMKEFM+DMALEEMPMSGCTCFSTLKM*IL VST
Sbjct: 362 KMSLMKEFMMDMALEEMPMSGCTCFSTLKM*ILYVST 252
Score = 100 bits (214), Expect(3) = 9e-035
Identities = 43/53 (81%), Positives = 47/53 (88%)
Frame = +2 / +3
Query: 1196 DLQDLHLQGAEAGAPGHWHLLQGHVDHELLH*RYLREARC*GRQARAL*QEAY 1354
D+QDLHLQGAEAGAPGH HLLQGHV HELLH R+LREAR GRQARA+ QEA+
Sbjct: 258 DVQDLHLQGAEAGAPGHRHLLQGHVHHELLHQRHLREARRRGRQARAVQQEAH 416
Score = 61.1 bits (127), Expect(3) = 9e-035
Identities = 25/28 (89%), Positives = 26/28 (92%)
Frame = +2 / +3
Query: 1400 RGARQARRLRGHQGRHQVHLGLGCAAAA 1483
RGAR+ARRL GHQGRHQVHL LGCAAAA
Sbjct: 462 RGAREARRL*GHQGRHQVHLVLGCAAAA 545
Score = 41.4 bits (84), Expect(3) = 5e-048
Identities = 18/32 (56%), Positives = 23/32 (71%)
Frame = -1 / -2
Query: 1623 YSWVE*APLRSYQITQLLQTDR*HT*KPAGSS 1528
+ WV+ APLR +QITQLLQ + H *KP S+
Sbjct: 692 FFWVKLAPLRLHQITQLLQKENRHI*KPPTSN 597
Score = 40.0 bits (81), Expect(4) = 8e-057
Identities = 17/26 (65%), Positives = 19/26 (73%)
Frame = +2 / +1
Query: 1541 GFYVCYLSVCSNCVI**DRNGAYSTQ 1618
GF +C S CSNCVI* +RNGA TQ
Sbjct: 610 GF*MCLFSFCSNCVI*CNRNGASLTQ 687
Score = 31.8 bits (63), Expect(3) = 5e-048
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = -2 / -1
Query: 1016 HRCGASWGLGCEG 978
HRCGASWG G G
Sbjct: 75 HRCGASWGSGARG 37
Score = 31.8 bits (63), Expect(4) = 8e-057
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +1 / +2
Query: 979 PSQPKPQLAPHRW 1017
P P+PQLAPHRW
Sbjct: 38 PLAPEPQLAPHRW 76
Score = 25.8 bits (50), Expect(3) = 9e-035
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = +3 / +2
Query: 1536 LLASMYVIYLSVATVLSDRTVMVLIQP 1616
L+ S V SV T LSD VMVL+ P
Sbjct: 605 LVVSKCVCSPSVVTALSDVIVMVLV*P 685
Score = 22.6 bits (43), Expect(4) = 8e-057
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = +3 / +1
Query: 1476 PPLAGFSPVF 1505
PPLAGFS +F
Sbjct: 544 PPLAGFSRLF 573
>gb|CX610420.1|CX610420 ANR1_18_D02.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_18_D02_A002 5', mRNA sequence
Length = 711
Score = 193 bits (416), Expect(4) = 9e-057
Identities = 85/97 (87%), Positives = 86/97 (88%)
Frame = +3 / +3
Query: 1191 VETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFXXXXXXXXXXXRYNKKPTITSRE 1370
VETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIF RYNKKPTITSRE
Sbjct: 252 VETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAAEAAKLARYNKKPTITSRE 431
Query: 1371 IQTSVRLVLPGELAKHAVSEGTKAVTKFTSA*AARPP 1481
IQTSVRLVLPGELAKHAVSEGTKAVTKFTS+*AARPP
Sbjct: 432 IQTSVRLVLPGELAKHAVSEGTKAVTKFTSS*AARPP 542
Score = 165 bits (355), Expect(3) = 5e-048
Identities = 75/97 (77%), Positives = 76/97 (78%)
Frame = -3 / -3
Query: 1480 GGRAA*AEVNLVTALVPSETACLASSPGRTRRTEVWISREVMVGFXXXXXXXXXXXXXXX 1301
GGRAA* EVNLVTALVPSETAC ASSPGRTRRTEVWISREVMVGF
Sbjct: 541 GGRAA*DEVNLVTALVPSETACFASSPGRTRRTEVWISREVMVGFLLYRASLAASAASFS 362
Query: 1300 XXXLMKEFMIDMALEEMPMSGCTCFSTLKM*IL*VST 1190
LMKEFM+DMALEEMPMSGCTCFSTLKM*IL VST
Sbjct: 361 KMSLMKEFMMDMALEEMPMSGCTCFSTLKM*ILYVST 251
Score = 100 bits (214), Expect(3) = 9e-035
Identities = 43/53 (81%), Positives = 47/53 (88%)
Frame = +2 / +2
Query: 1196 DLQDLHLQGAEAGAPGHWHLLQGHVDHELLH*RYLREARC*GRQARAL*QEAY 1354
D+QDLHLQGAEAGAPGH HLLQGHV HELLH R+LREAR GRQARA+ QEA+
Sbjct: 257 DVQDLHLQGAEAGAPGHRHLLQGHVHHELLHQRHLREARRRGRQARAVQQEAH 415
Score = 61.1 bits (127), Expect(3) = 9e-035
Identities = 25/28 (89%), Positives = 26/28 (92%)
Frame = +2 / +2
Query: 1400 RGARQARRLRGHQGRHQVHLGLGCAAAA 1483
RGAR+ARRL GHQGRHQVHL LGCAAAA
Sbjct: 461 RGAREARRL*GHQGRHQVHLVLGCAAAA 544
Score = 41.4 bits (84), Expect(3) = 5e-048
Identities = 18/32 (56%), Positives = 23/32 (71%)
Frame = -1 / -3
Query: 1623 YSWVE*APLRSYQITQLLQTDR*HT*KPAGSS 1528
+ WV+ APLR +QITQLLQ + H *KP S+
Sbjct: 691 FFWVKLAPLRLHQITQLLQKENRHI*KPPTSN 596
Score = 40.0 bits (81), Expect(4) = 9e-057
Identities = 17/26 (65%), Positives = 19/26 (73%)
Frame = +2 / +3
Query: 1541 GFYVCYLSVCSNCVI**DRNGAYSTQ 1618
GF +C S CSNCVI* +RNGA TQ
Sbjct: 609 GF*MCLFSFCSNCVI*CNRNGASLTQ 686
Score = 31.8 bits (63), Expect(3) = 5e-048
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = -2 / -2
Query: 1016 HRCGASWGLGCEG 978
HRCGASWG G G
Sbjct: 74 HRCGASWGSGARG 36
Score = 31.8 bits (63), Expect(4) = 9e-057
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +1 / +1
Query: 979 PSQPKPQLAPHRW 1017
P P+PQLAPHRW
Sbjct: 37 PLAPEPQLAPHRW 75
Score = 25.8 bits (50), Expect(3) = 9e-035
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = +3 / +1
Query: 1536 LLASMYVIYLSVATVLSDRTVMVLIQP 1616
L+ S V SV T LSD VMVL+ P
Sbjct: 604 LVVSKCVCSPSVVTALSDVIVMVLV*P 684
Score = 22.6 bits (43), Expect(4) = 9e-057
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = +3 / +3
Query: 1476 PPLAGFSPVF 1505
PPLAGFS +F
Sbjct: 543 PPLAGFSRLF 572
>gb|CL152064.1|CL152064 104_335_10779694_116_31364_094 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10779694, DNA
sequence
Length = 690
Score = 193 bits (416), Expect(3) = 3e-056
Identities = 85/97 (87%), Positives = 86/97 (88%)
Frame = +3 / -2
Query: 1191 VETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFXXXXXXXXXXXRYNKKPTITSRE 1370
VETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIF RYNKKPTITSRE
Sbjct: 542 VETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAAEAAKLARYNKKPTITSRE 363
Query: 1371 IQTSVRLVLPGELAKHAVSEGTKAVTKFTSA*AARPP 1481
IQTSVRLVLPGELAKHAVSEGTKAVTKFTS+*AARPP
Sbjct: 362 IQTSVRLVLPGELAKHAVSEGTKAVTKFTSS*AARPP 252
Score = 165 bits (355), Expect(2) = 4e-048
Identities = 75/97 (77%), Positives = 76/97 (78%)
Frame = -3 / +1
Query: 1480 GGRAA*AEVNLVTALVPSETACLASSPGRTRRTEVWISREVMVGFXXXXXXXXXXXXXXX 1301
GGRAA* EVNLVTALVPSETAC ASSPGRTRRTEVWISREVMVGF
Sbjct: 253 GGRAA*DEVNLVTALVPSETACFASSPGRTRRTEVWISREVMVGFLLYRASLAASAASFS 432
Query: 1300 XXXLMKEFMIDMALEEMPMSGCTCFSTLKM*IL*VST 1190
LMKEFM+DMALEEMPMSGCTCFSTLKM*IL VST
Sbjct: 433 KMSLMKEFMMDMALEEMPMSGCTCFSTLKM*ILYVST 543
Score = 100 bits (214), Expect(3) = 1e-039
Identities = 43/53 (81%), Positives = 47/53 (88%)
Frame = +2 / -1
Query: 1196 DLQDLHLQGAEAGAPGHWHLLQGHVDHELLH*RYLREARC*GRQARAL*QEAY 1354
D+QDLHLQGAEAGAPGH HLLQGHV HELLH R+LREAR GRQARA+ QEA+
Sbjct: 537 DVQDLHLQGAEAGAPGHRHLLQGHVHHELLHQRHLREARRRGRQARAVQQEAH 379
Score = 61.1 bits (127), Expect(3) = 1e-039
Identities = 25/28 (89%), Positives = 26/28 (92%)
Frame = +2 / -1
Query: 1400 RGARQARRLRGHQGRHQVHLGLGCAAAA 1483
RGAR+ARRL GHQGRHQVHL LGCAAAA
Sbjct: 333 RGAREARRL*GHQGRHQVHLVLGCAAAA 250
Score = 49.2 bits (101), Expect(2) = 4e-048
Identities = 23/39 (58%), Positives = 28/39 (71%)
Frame = -1 / +1
Query: 1644 EMIHIETYSWVE*APLRSYQITQLLQTDR*HT*KPAGSS 1528
+MIH T SWV+ APLR +QITQLLQ + H *KP S+
Sbjct: 82 QMIHK*TGSWVKLAPLRLHQITQLLQKENRHI*KPPTSN 198
Score = 44.1 bits (90), Expect(3) = 3e-056
Identities = 21/34 (61%), Positives = 24/34 (70%)
Frame = +2 / -2
Query: 1541 GFYVCYLSVCSNCVI**DRNGAYSTQLYVSM*II 1642
GF +C S CSNCVI* +RNGA TQL V + II
Sbjct: 185 GF*MCLFSFCSNCVI*CNRNGASLTQLPVYLWII 84
Score = 42.3 bits (86), Expect(3) = 1e-039
Identities = 20/36 (55%), Positives = 24/36 (66%)
Frame = +3 / -3
Query: 1536 LLASMYVIYLSVATVLSDRTVMVLIQPSYMFLCESS 1643
L+ S V SV T LSD VMVL+ PSY+F+C SS
Sbjct: 190 LVVSKCVCSPSVVTALSDVIVMVLV*PSYLFICGSS 83
Score = 22.6 bits (43), Expect(3) = 3e-056
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = +3 / -2
Query: 1476 PPLAGFSPVF 1505
PPLAGFS +F
Sbjct: 251 PPLAGFSRLF 222
>gb|CW155044.1|CW155044 104_557_11145924_148_36361_042 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11145924, DNA
sequence
Length = 679
Score = 193 bits (416), Expect(3) = 3e-056
Identities = 85/97 (87%), Positives = 86/97 (88%)
Frame = +3 / -1
Query: 1191 VETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFXXXXXXXXXXXRYNKKPTITSRE 1370
VETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIF RYNKKPTITSRE
Sbjct: 607 VETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAAEAAKLARYNKKPTITSRE 428
Query: 1371 IQTSVRLVLPGELAKHAVSEGTKAVTKFTSA*AARPP 1481
IQTSVRLVLPGELAKHAVSEGTKAVTKFTS+*AARPP
Sbjct: 427 IQTSVRLVLPGELAKHAVSEGTKAVTKFTSS*AARPP 317
Score = 165 bits (355), Expect(2) = 4e-048
Identities = 75/97 (77%), Positives = 76/97 (78%)
Frame = -3 / +3
Query: 1480 GGRAA*AEVNLVTALVPSETACLASSPGRTRRTEVWISREVMVGFXXXXXXXXXXXXXXX 1301
GGRAA* EVNLVTALVPSETAC ASSPGRTRRTEVWISREVMVGF
Sbjct: 318 GGRAA*DEVNLVTALVPSETACFASSPGRTRRTEVWISREVMVGFLLYRASLAASAASFS 497
Query: 1300 XXXLMKEFMIDMALEEMPMSGCTCFSTLKM*IL*VST 1190
LMKEFM+DMALEEMPMSGCTCFSTLKM*IL VST
Sbjct: 498 KMSLMKEFMMDMALEEMPMSGCTCFSTLKM*ILYVST 608
Score = 100 bits (214), Expect(3) = 1e-039
Identities = 43/53 (81%), Positives = 47/53 (88%)
Frame = +2 / -3
Query: 1196 DLQDLHLQGAEAGAPGHWHLLQGHVDHELLH*RYLREARC*GRQARAL*QEAY 1354
D+QDLHLQGAEAGAPGH HLLQGHV HELLH R+LREAR GRQARA+ QEA+
Sbjct: 602 DVQDLHLQGAEAGAPGHRHLLQGHVHHELLHQRHLREARRRGRQARAVQQEAH 444
Score = 61.1 bits (127), Expect(3) = 1e-039
Identities = 25/28 (89%), Positives = 26/28 (92%)
Frame = +2 / -3
Query: 1400 RGARQARRLRGHQGRHQVHLGLGCAAAA 1483
RGAR+ARRL GHQGRHQVHL LGCAAAA
Sbjct: 398 RGAREARRL*GHQGRHQVHLVLGCAAAA 315
Score = 49.2 bits (101), Expect(2) = 4e-048
Identities = 23/39 (58%), Positives = 28/39 (71%)
Frame = -1 / +3
Query: 1644 EMIHIETYSWVE*APLRSYQITQLLQTDR*HT*KPAGSS 1528
+MIH T SWV+ APLR +QITQLLQ + H *KP S+
Sbjct: 147 QMIHK*TGSWVKLAPLRLHQITQLLQKENRHI*KPPTSN 263
Score = 44.1 bits (90), Expect(3) = 3e-056
Identities = 21/34 (61%), Positives = 24/34 (70%)
Frame = +2 / -1
Query: 1541 GFYVCYLSVCSNCVI**DRNGAYSTQLYVSM*II 1642
GF +C S CSNCVI* +RNGA TQL V + II
Sbjct: 250 GF*MCLFSFCSNCVI*CNRNGASLTQLPVYLWII 149
Score = 42.3 bits (86), Expect(3) = 1e-039
Identities = 20/36 (55%), Positives = 24/36 (66%)
Frame = +3 / -2
Query: 1536 LLASMYVIYLSVATVLSDRTVMVLIQPSYMFLCESS 1643
L+ S V SV T LSD VMVL+ PSY+F+C SS
Sbjct: 255 LVVSKCVCSPSVVTALSDVIVMVLV*PSYLFICGSS 148
Score = 22.6 bits (43), Expect(3) = 3e-056
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = +3 / -1
Query: 1476 PPLAGFSPVF 1505
PPLAGFS +F
Sbjct: 316 PPLAGFSRLF 287
>gb|CX606979.1|CX606979 ANR1_6_B05.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_6_B05_A002 3', mRNA sequence
Length = 665
Score = 193 bits (416), Expect(4) = 4e-056
Identities = 85/97 (87%), Positives = 86/97 (88%)
Frame = +3 / +3
Query: 1191 VETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFXXXXXXXXXXXRYNKKPTITSRE 1370
VETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIF RYNKKPTITSRE
Sbjct: 234 VETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAAEAAKLARYNKKPTITSRE 413
Query: 1371 IQTSVRLVLPGELAKHAVSEGTKAVTKFTSA*AARPP 1481
IQTSVRLVLPGELAKHAVSEGTKAVTKFTS+*AARPP
Sbjct: 414 IQTSVRLVLPGELAKHAVSEGTKAVTKFTSS*AARPP 524
Score = 165 bits (355), Expect(3) = 3e-046
Identities = 75/97 (77%), Positives = 76/97 (78%)
Frame = -3 / -2
Query: 1480 GGRAA*AEVNLVTALVPSETACLASSPGRTRRTEVWISREVMVGFXXXXXXXXXXXXXXX 1301
GGRAA* EVNLVTALVPSETAC ASSPGRTRRTEVWISREVMVGF
Sbjct: 523 GGRAA*DEVNLVTALVPSETACFASSPGRTRRTEVWISREVMVGFLLYRASLAASAASFS 344
Query: 1300 XXXLMKEFMIDMALEEMPMSGCTCFSTLKM*IL*VST 1190
LMKEFM+DMALEEMPMSGCTCFSTLKM*IL VST
Sbjct: 343 KMSLMKEFMMDMALEEMPMSGCTCFSTLKM*ILYVST 233
Score = 100 bits (214), Expect(3) = 2e-034
Identities = 43/53 (81%), Positives = 47/53 (88%)
Frame = +2 / +2
Query: 1196 DLQDLHLQGAEAGAPGHWHLLQGHVDHELLH*RYLREARC*GRQARAL*QEAY 1354
D+QDLHLQGAEAGAPGH HLLQGHV HELLH R+LREAR GRQARA+ QEA+
Sbjct: 239 DVQDLHLQGAEAGAPGHRHLLQGHVHHELLHQRHLREARRRGRQARAVQQEAH 397
Score = 61.1 bits (127), Expect(3) = 2e-034
Identities = 25/28 (89%), Positives = 26/28 (92%)
Frame = +2 / +2
Query: 1400 RGARQARRLRGHQGRHQVHLGLGCAAAA 1483
RGAR+ARRL GHQGRHQVHL LGCAAAA
Sbjct: 443 RGAREARRL*GHQGRHQVHLVLGCAAAA 526
Score = 37.3 bits (75), Expect(4) = 4e-056
Identities = 15/22 (68%), Positives = 17/22 (77%)
Frame = +2 / +3
Query: 1541 GFYVCYLSVCSNCVI**DRNGA 1606
GF +C S CSNCVI* +RNGA
Sbjct: 591 GF*MCLFSFCSNCVI*CNRNGA 656
Score = 35.4 bits (71), Expect(3) = 3e-046
Identities = 16/26 (61%), Positives = 19/26 (73%)
Frame = -1 / -2
Query: 1605 APLRSYQITQLLQTDR*HT*KPAGSS 1528
APLR +QITQLLQ + H *KP S+
Sbjct: 655 APLRLHQITQLLQKENRHI*KPPTSN 578
Score = 31.8 bits (63), Expect(3) = 3e-046
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = -2 / -1
Query: 1016 HRCGASWGLGCEG 978
HRCGASWG G G
Sbjct: 56 HRCGASWGSGARG 18
Score = 31.8 bits (63), Expect(4) = 4e-056
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +1 / +1
Query: 979 PSQPKPQLAPHRW 1017
P P+PQLAPHRW
Sbjct: 19 PLAPEPQLAPHRW 57
Score = 24.4 bits (47), Expect(3) = 2e-034
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +3 / +1
Query: 1536 LLASMYVIYLSVATVLSDRTVMVLI 1610
L+ S V SV T LSD VMVL+
Sbjct: 586 LVVSKCVCSPSVVTALSDVIVMVLV 660
Score = 22.6 bits (43), Expect(4) = 4e-056
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = +3 / +3
Query: 1476 PPLAGFSPVF 1505
PPLAGFS +F
Sbjct: 525 PPLAGFSRLF 554
>gb|CD213713.1|CD213713 HS1_52_G12.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA clone
HS1_52_G12_A012 5', mRNA sequence
Length = 729
Score = 190 bits (409), Expect(3) = 9e-056
Identities = 84/97 (86%), Positives = 85/97 (87%)
Frame = +3 / +2
Query: 1191 VETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFXXXXXXXXXXXRYNKKPTITSRE 1370
VETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIF RYNKKPTITSRE
Sbjct: 263 VETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAAEAAKLARYNKKPTITSRE 442
Query: 1371 IQTSVRLVLPGELAKHAVSEGTKAVTKFTSA*AARPP 1481
IQTSVRLVLPG LAKHAVSEGTKAVTKFTS+*AARPP
Sbjct: 443 IQTSVRLVLPGGLAKHAVSEGTKAVTKFTSS*AARPP 553
Score = 165 bits (354), Expect(3) = 1e-047
Identities = 75/97 (77%), Positives = 76/97 (78%)
Frame = -3 / -1
Query: 1480 GGRAA*AEVNLVTALVPSETACLASSPGRTRRTEVWISREVMVGFXXXXXXXXXXXXXXX 1301
GGRAA* EVNLVTALVPSETACLAS PGRTRRTEVWISREVMVGF
Sbjct: 552 GGRAA*DEVNLVTALVPSETACLASPPGRTRRTEVWISREVMVGFLLYRASLAASAASFS 373
Query: 1300 XXXLMKEFMIDMALEEMPMSGCTCFSTLKM*IL*VST 1190
LMKEFM+DMALEEMPMSGCTCFSTLKM*IL VST
Sbjct: 372 KMSLMKEFMMDMALEEMPMSGCTCFSTLKM*ILYVST 262
Score = 100 bits (214), Expect(3) = 4e-039
Identities = 43/53 (81%), Positives = 47/53 (88%)
Frame = +2 / +1
Query: 1196 DLQDLHLQGAEAGAPGHWHLLQGHVDHELLH*RYLREARC*GRQARAL*QEAY 1354
D+QDLHLQGAEAGAPGH HLLQGHV HELLH R+LREAR GRQARA+ QEA+
Sbjct: 268 DVQDLHLQGAEAGAPGHRHLLQGHVHHELLHQRHLREARRRGRQARAVQQEAH 426
Score = 62.5 bits (130), Expect(3) = 4e-039
Identities = 26/28 (92%), Positives = 26/28 (92%)
Frame = +2 / +1
Query: 1400 RGARQARRLRGHQGRHQVHLGLGCAAAA 1483
RGARQARRL GHQGRHQVHL LGCAAAA
Sbjct: 472 RGARQARRL*GHQGRHQVHLVLGCAAAA 555
Score = 42.8 bits (87), Expect(3) = 9e-056
Identities = 20/36 (55%), Positives = 24/36 (66%)
Frame = +3 / +3
Query: 1536 LLASMYVIYLSVATVLSDRTVMVLIQPSYMFLCESS 1643
L+ S V LSV T LSD VMVL+ P Y+F+C SS
Sbjct: 621 LVVSKCVSSLSVVTALSDVIVMVLV*PCYLFICGSS 728
Score = 40.9 bits (83), Expect(3) = 1e-047
Identities = 21/39 (53%), Positives = 27/39 (69%)
Frame = -1 / -1
Query: 1644 EMIHIETYSWVE*APLRSYQITQLLQTDR*HT*KPAGSS 1528
+MIH T S V+ APL +QITQLLQ ++ H *KP S+
Sbjct: 729 QMIHK*TSSRVKLAPLLLHQITQLLQKEKRHI*KPPTSN 613
Score = 39.1 bits (79), Expect(3) = 4e-039
Identities = 19/34 (55%), Positives = 22/34 (64%)
Frame = +2 / +2
Query: 1541 GFYVCYLSVCSNCVI**DRNGAYSTQLYVSM*II 1642
GF +C S CSNCVI* + NGA T L V + II
Sbjct: 626 GF*MCLFSFCSNCVI*CNSNGASLTLLLVYLWII 727
Score = 31.8 bits (63), Expect(3) = 1e-047
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = -2 / -3
Query: 1016 HRCGASWGLGCEG 978
HRCGASWG G G
Sbjct: 85 HRCGASWGSGARG 47
Score = 31.8 bits (63), Expect(3) = 9e-056
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +1 / +3
Query: 979 PSQPKPQLAPHRW 1017
P P+PQLAPHRW
Sbjct: 48 PLAPEPQLAPHRW 86
>gb|CW155043.1|CW155043 104_557_11145924_116_36362_042 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11145924, DNA
sequence
Length = 743
Score = 193 bits (416), Expect(4) = 4e-055
Identities = 85/97 (87%), Positives = 86/97 (88%)
Frame = +3 / +1
Query: 1191 VETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFXXXXXXXXXXXRYNKKPTITSRE 1370
VETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIF RYNKKPTITSRE
Sbjct: 277 VETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAAEAAKLARYNKKPTITSRE 456
Query: 1371 IQTSVRLVLPGELAKHAVSEGTKAVTKFTSA*AARPP 1481
IQTSVRLVLPGELAKHAVSEGTKAVTKFTS+*AARPP
Sbjct: 457 IQTSVRLVLPGELAKHAVSEGTKAVTKFTSS*AARPP 567
Score = 165 bits (355), Expect(3) = 2e-046
Identities = 75/97 (77%), Positives = 76/97 (78%)
Frame = -3 / -1
Query: 1480 GGRAA*AEVNLVTALVPSETACLASSPGRTRRTEVWISREVMVGFXXXXXXXXXXXXXXX 1301
GGRAA* EVNLVTALVPSETAC ASSPGRTRRTEVWISREVMVGF
Sbjct: 566 GGRAA*DEVNLVTALVPSETACFASSPGRTRRTEVWISREVMVGFLLYRASLAASAASFS 387
Query: 1300 XXXLMKEFMIDMALEEMPMSGCTCFSTLKM*IL*VST 1190
LMKEFM+DMALEEMPMSGCTCFSTLKM*IL VST
Sbjct: 386 KMSLMKEFMMDMALEEMPMSGCTCFSTLKM*ILYVST 276
Score = 100 bits (214), Expect(3) = 5e-035
Identities = 43/53 (81%), Positives = 47/53 (88%)
Frame = +2 / +3
Query: 1196 DLQDLHLQGAEAGAPGHWHLLQGHVDHELLH*RYLREARC*GRQARAL*QEAY 1354
D+QDLHLQGAEAGAPGH HLLQGHV HELLH R+LREAR GRQARA+ QEA+
Sbjct: 282 DVQDLHLQGAEAGAPGHRHLLQGHVHHELLHQRHLREARRRGRQARAVQQEAH 440
Score = 61.1 bits (127), Expect(3) = 5e-035
Identities = 25/28 (89%), Positives = 26/28 (92%)
Frame = +2 / +3
Query: 1400 RGARQARRLRGHQGRHQVHLGLGCAAAA 1483
RGAR+ARRL GHQGRHQVHL LGCAAAA
Sbjct: 486 RGAREARRL*GHQGRHQVHLVLGCAAAA 569
Score = 36.3 bits (73), Expect(3) = 2e-046
Identities = 16/27 (59%), Positives = 19/27 (70%)
Frame = -1 / -1
Query: 1620 SWVE*APLRSYQITQLLQTDR*HT*KP 1540
SWV+ AP +QITQLLQ + H *KP
Sbjct: 713 SWVKLAPYDLHQITQLLQKENRHI*KP 633
Score = 34.5 bits (69), Expect(4) = 4e-055
Identities = 16/27 (59%), Positives = 17/27 (62%)
Frame = +2 / +1
Query: 1541 GFYVCYLSVCSNCVI**DRNGAYSTQL 1621
GF +C S CSNCVI* GA TQL
Sbjct: 634 GF*MCLFSFCSNCVI*CKSYGASLTQL 714
Score = 31.8 bits (63), Expect(3) = 2e-046
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = -2 / -3
Query: 1016 HRCGASWGLGCEG 978
HRCGASWG G G
Sbjct: 99 HRCGASWGSGARG 61
Score = 31.8 bits (63), Expect(4) = 4e-055
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +1 / +2
Query: 979 PSQPKPQLAPHRW 1017
P P+PQLAPHRW
Sbjct: 62 PLAPEPQLAPHRW 100
Score = 26.7 bits (52), Expect(3) = 5e-035
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = +3 / +2
Query: 1536 LLASMYVIYLSVATVLSDRTVMVLIQPSY 1622
++ S V SV T LSD MVL+ PSY
Sbjct: 629 VVVSKCVCSPSVVTALSDVNRMVLV*PSY 715
Score = 22.6 bits (43), Expect(4) = 4e-055
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = +3 / +1
Query: 1476 PPLAGFSPVF 1505
PPLAGFS +F
Sbjct: 568 PPLAGFSRLF 597
>gb|CL180078.1|CL180078 104_389_10895747_116_31908_275 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10895747, DNA
sequence
Length = 618
Score = 198 bits (427), Expect(2) = 5e-054
Identities = 82/93 (88%), Positives = 87/93 (93%)
Frame = +3 / -1
Query: 570 EEESRVEAGLIHLRSLQKRTGSYFRYTGSLTVPPCTENVVWSVLGKVRQISQDQLQLLKA 749
EEES+VE LIHLRSLQKRTGSYFRYTGSLTVPPCTENVVWSVLGKVRQIS++QLQLLKA
Sbjct: 486 EEESQVEVALIHLRSLQKRTGSYFRYTGSLTVPPCTENVVWSVLGKVRQISKEQLQLLKA 307
Query: 750 PLPGSDARPTQPLNGRTVQFYNPPNSTISFQI* 848
PLPG+D RPTQP NGR VQFYNPP STISFQ+*
Sbjct: 306 PLPGNDYRPTQPTNGRKVQFYNPPGSTISFQM* 208
Score = 151 bits (325), Expect(2) = 2e-039
Identities = 65/82 (79%), Positives = 68/82 (82%)
Frame = -3 / +2
Query: 844 IWKEMVLLGGL*NWTVLPLSGCVGRASLPGSGALSSCSWSWLIWRTLPRTLQTTFSVHGG 665
IW EMVL GGL*NWT LPL GCVGR S PGSGALSSCS S LI T P TLQTTFSV GG
Sbjct: 212 IWNEMVLPGGL*NWTFLPLVGCVGR*SFPGSGALSSCSCSLLICLTFPSTLQTTFSVQGG 391
Query: 664 TVREPV*RK*LPVRFCSERRWM 599
TVR+PV RK*LPVRFCS+RRW+
Sbjct: 392 TVRDPVYRK*LPVRFCSDRRWI 457
Score = 118 bits (252), Expect = 3e-025
Identities = 60/95 (63%), Positives = 64/95 (67%)
Frame = -2 / +1
Query: 854 LVLDLEGDGAVGRVVELDGPAVERLRGARVAPGQRRLEQLQLVLADLAHLAEDAPDDVLG 675
+ L LE DGA RVVELD PAV LRGA V PGQRRLEQLQL+LADL HL + APDDVL
Sbjct: 202 VTLHLE*DGAAWRVVELDFPAVGGLRGAVVVPGQRRLEQLQLLLADLPHLPQHAPDDVLC 381
Query: 674 AWRHXXXXXXXXXXXXALLQRAQVDEAGLHPRLLL 570
A RH ALLQR QVD+ LH RLLL
Sbjct: 382 AGRHGEGPRVPEVASRALLQRPQVDQRHLHLRLLL 486
Score = 35.9 bits (72), Expect(2) = 5e-054
Identities = 14/20 (70%), Positives = 18/20 (90%)
Frame = +3 / -1
Query: 516 QLKRQLGEMAQDRCDFAEEE 575
QLKRQL E+A+D+C+ AEEE
Sbjct: 537 QLKRQLVEVAEDKCNSAEEE 478
Score = 34.1 bits (68), Expect(2) = 2e-039
Identities = 16/20 (80%), Positives = 16/20 (80%)
Frame = -2 / +1
Query: 575 LLLGEVAPVLGHLAQLPLQL 516
LLL VA VLGHL QLPLQL
Sbjct: 478 LLLRRVALVLGHLHQLPLQL 537
>gb|CW048231.1|CW048231 104_286_10513235_115_30215 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10513235, DNA
sequence
Length = 510
Score = 198 bits (427), Expect(2) = 5e-054
Identities = 82/93 (88%), Positives = 87/93 (93%)
Frame = +3 / -3
Query: 570 EEESRVEAGLIHLRSLQKRTGSYFRYTGSLTVPPCTENVVWSVLGKVRQISQDQLQLLKA 749
EEES+VE LIHLRSLQKRTGSYFRYTGSLTVPPCTENVVWSVLGKVRQIS++QLQLLKA
Sbjct: 388 EEESQVEVALIHLRSLQKRTGSYFRYTGSLTVPPCTENVVWSVLGKVRQISKEQLQLLKA 209
Query: 750 PLPGSDARPTQPLNGRTVQFYNPPNSTISFQI* 848
PLPG+D RPTQP NGR VQFYNPP STISFQ+*
Sbjct: 208 PLPGNDYRPTQPTNGRKVQFYNPPGSTISFQM* 110
Score = 151 bits (325), Expect(2) = 2e-039
Identities = 65/82 (79%), Positives = 68/82 (82%)
Frame = -3 / +3
Query: 844 IWKEMVLLGGL*NWTVLPLSGCVGRASLPGSGALSSCSWSWLIWRTLPRTLQTTFSVHGG 665
IW EMVL GGL*NWT LPL GCVGR S PGSGALSSCS S LI T P TLQTTFSV GG
Sbjct: 114 IWNEMVLPGGL*NWTFLPLVGCVGR*SFPGSGALSSCSCSLLICLTFPSTLQTTFSVQGG 293
Query: 664 TVREPV*RK*LPVRFCSERRWM 599
TVR+PV RK*LPVRFCS+RRW+
Sbjct: 294 TVRDPVYRK*LPVRFCSDRRWI 359
Score = 118 bits (252), Expect = 3e-025
Identities = 60/95 (63%), Positives = 64/95 (67%)
Frame = -2 / +2
Query: 854 LVLDLEGDGAVGRVVELDGPAVERLRGARVAPGQRRLEQLQLVLADLAHLAEDAPDDVLG 675
+ L LE DGA RVVELD PAV LRGA V PGQRRLEQLQL+LADL HL + APDDVL
Sbjct: 104 VTLHLE*DGAAWRVVELDFPAVGGLRGAVVVPGQRRLEQLQLLLADLPHLPQHAPDDVLC 283
Query: 674 AWRHXXXXXXXXXXXXALLQRAQVDEAGLHPRLLL 570
A RH ALLQR QVD+ LH RLLL
Sbjct: 284 AGRHGEGPRVPEVASRALLQRPQVDQRHLHLRLLL 388
Score = 35.9 bits (72), Expect(2) = 5e-054
Identities = 14/20 (70%), Positives = 18/20 (90%)
Frame = +3 / -3
Query: 516 QLKRQLGEMAQDRCDFAEEE 575
QLKRQL E+A+D+C+ AEEE
Sbjct: 439 QLKRQLVEVAEDKCNSAEEE 380
Score = 34.1 bits (68), Expect(2) = 2e-039
Identities = 16/20 (80%), Positives = 16/20 (80%)
Frame = -2 / +2
Query: 575 LLLGEVAPVLGHLAQLPLQL 516
LLL VA VLGHL QLPLQL
Sbjct: 380 LLLRRVALVLGHLHQLPLQL 439
>gb|CW498136.1|CW498136 fsbb001f291d19k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f291d19, DNA
sequence
Length = 461
Score = 198 bits (427), Expect(2) = 5e-054
Identities = 82/93 (88%), Positives = 87/93 (93%)
Frame = +3 / -1
Query: 570 EEESRVEAGLIHLRSLQKRTGSYFRYTGSLTVPPCTENVVWSVLGKVRQISQDQLQLLKA 749
EEES+VE LIHLRSLQKRTGSYFRYTGSLTVPPCTENVVWSVLGKVRQIS++QLQLLKA
Sbjct: 335 EEESQVEVALIHLRSLQKRTGSYFRYTGSLTVPPCTENVVWSVLGKVRQISKEQLQLLKA 156
Query: 750 PLPGSDARPTQPLNGRTVQFYNPPNSTISFQI* 848
PLPG+D RPTQP NGR VQFYNPP STISFQ+*
Sbjct: 155 PLPGNDYRPTQPTNGRKVQFYNPPGSTISFQM* 57
Score = 151 bits (325), Expect(2) = 2e-039
Identities = 65/82 (79%), Positives = 68/82 (82%)
Frame = -3 / +1
Query: 844 IWKEMVLLGGL*NWTVLPLSGCVGRASLPGSGALSSCSWSWLIWRTLPRTLQTTFSVHGG 665
IW EMVL GGL*NWT LPL GCVGR S PGSGALSSCS S LI T P TLQTTFSV GG
Sbjct: 61 IWNEMVLPGGL*NWTFLPLVGCVGR*SFPGSGALSSCSCSLLICLTFPSTLQTTFSVQGG 240
Query: 664 TVREPV*RK*LPVRFCSERRWM 599
TVR+PV RK*LPVRFCS+RRW+
Sbjct: 241 TVRDPVYRK*LPVRFCSDRRWI 306
Score = 118 bits (252), Expect = 3e-025
Identities = 60/95 (63%), Positives = 64/95 (67%)
Frame = -2 / +3
Query: 854 LVLDLEGDGAVGRVVELDGPAVERLRGARVAPGQRRLEQLQLVLADLAHLAEDAPDDVLG 675
+ L LE DGA RVVELD PAV LRGA V PGQRRLEQLQL+LADL HL + APDDVL
Sbjct: 51 VTLHLE*DGAAWRVVELDFPAVGGLRGAVVVPGQRRLEQLQLLLADLPHLPQHAPDDVLC 230
Query: 674 AWRHXXXXXXXXXXXXALLQRAQVDEAGLHPRLLL 570
A RH ALLQR QVD+ LH RLLL
Sbjct: 231 AGRHGEGPRVPEVASRALLQRPQVDQRHLHLRLLL 335
Score = 35.9 bits (72), Expect(2) = 5e-054
Identities = 14/20 (70%), Positives = 18/20 (90%)
Frame = +3 / -1
Query: 516 QLKRQLGEMAQDRCDFAEEE 575
QLKRQL E+A+D+C+ AEEE
Sbjct: 386 QLKRQLVEVAEDKCNSAEEE 327
Score = 34.1 bits (68), Expect(2) = 2e-039
Identities = 16/20 (80%), Positives = 16/20 (80%)
Frame = -2 / +3
Query: 575 LLLGEVAPVLGHLAQLPLQL 516
LLL VA VLGHL QLPLQL
Sbjct: 327 LLLRRVALVLGHLHQLPLQL 386
>gb|CD213618.1|CD213618 HS1_52_G12.b1_A012 Heat-shocked seedlings Sorghum bicolor cDNA clone
HS1_52_G12_A012 3', mRNA sequence
Length = 611
Score = 190 bits (409), Expect(2) = 1e-053
Identities = 84/97 (86%), Positives = 85/97 (87%)
Frame = +3 / +2
Query: 1191 VETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFXXXXXXXXXXXRYNKKPTITSRE 1370
VETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIF RYNKKPTITSRE
Sbjct: 104 VETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAAEAAKLARYNKKPTITSRE 283
Query: 1371 IQTSVRLVLPGELAKHAVSEGTKAVTKFTSA*AARPP 1481
IQTSVRLVLPG LAKHAVSEGTKAVTKFTS+*AARPP
Sbjct: 284 IQTSVRLVLPGGLAKHAVSEGTKAVTKFTSS*AARPP 394
Score = 165 bits (354), Expect(2) = 1e-045
Identities = 75/97 (77%), Positives = 76/97 (78%)
Frame = -3 / -3
Query: 1480 GGRAA*AEVNLVTALVPSETACLASSPGRTRRTEVWISREVMVGFXXXXXXXXXXXXXXX 1301
GGRAA* EVNLVTALVPSETACLAS PGRTRRTEVWISREVMVGF
Sbjct: 393 GGRAA*DEVNLVTALVPSETACLASPPGRTRRTEVWISREVMVGFLLYRASLAASAASFS 214
Query: 1300 XXXLMKEFMIDMALEEMPMSGCTCFSTLKM*IL*VST 1190
LMKEFM+DMALEEMPMSGCTCFSTLKM*IL VST
Sbjct: 213 KMSLMKEFMMDMALEEMPMSGCTCFSTLKM*ILYVST 103
Score = 100 bits (214), Expect(3) = 4e-039
Identities = 43/53 (81%), Positives = 47/53 (88%)
Frame = +2 / +1
Query: 1196 DLQDLHLQGAEAGAPGHWHLLQGHVDHELLH*RYLREARC*GRQARAL*QEAY 1354
D+QDLHLQGAEAGAPGH HLLQGHV HELLH R+LREAR GRQARA+ QEA+
Sbjct: 109 DVQDLHLQGAEAGAPGHRHLLQGHVHHELLHQRHLREARRRGRQARAVQQEAH 267
Score = 62.5 bits (130), Expect(3) = 4e-039
Identities = 26/28 (92%), Positives = 26/28 (92%)
Frame = +2 / +1
Query: 1400 RGARQARRLRGHQGRHQVHLGLGCAAAA 1483
RGARQARRL GHQGRHQVHL LGCAAAA
Sbjct: 313 RGARQARRL*GHQGRHQVHLVLGCAAAA 396
Score = 42.8 bits (87), Expect(2) = 1e-053
Identities = 20/36 (55%), Positives = 24/36 (66%)
Frame = +3 / +3
Query: 1536 LLASMYVIYLSVATVLSDRTVMVLIQPSYMFLCESS 1643
L+ S V LSV T LSD VMVL+ P Y+F+C SS
Sbjct: 462 LVVSKCVSSLSVVTALSDVIVMVLV*PCYLFICGSS 569
Score = 40.9 bits (83), Expect(2) = 1e-045
Identities = 21/39 (53%), Positives = 27/39 (69%)
Frame = -1 / -3
Query: 1644 EMIHIETYSWVE*APLRSYQITQLLQTDR*HT*KPAGSS 1528
+MIH T S V+ APL +QITQLLQ ++ H *KP S+
Sbjct: 570 QMIHK*TSSRVKLAPLLLHQITQLLQKEKRHI*KPPTSN 454
Score = 39.1 bits (79), Expect(3) = 4e-039
Identities = 19/34 (55%), Positives = 22/34 (64%)
Frame = +2 / +2
Query: 1541 GFYVCYLSVCSNCVI**DRNGAYSTQLYVSM*II 1642
GF +C S CSNCVI* + NGA T L V + II
Sbjct: 467 GF*MCLFSFCSNCVI*CNSNGASLTLLLVYLWII 568
>gb|CW410847.1|CW410847 fsbb001f105m09f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f105m09, DNA
sequence
Length = 733
Score = 183 bits (395), Expect(3) = 2e-053
Identities = 81/93 (87%), Positives = 82/93 (88%)
Frame = +3 / -1
Query: 1203 KIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFXXXXXXXXXXXRYNKKPTITSREIQTS 1382
KIYIFKVLKQVHPDIGISSKAMSIMNSFINDIF RYNKKPTITSREIQTS
Sbjct: 619 KIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAAEAAKLARYNKKPTITSREIQTS 440
Query: 1383 VRLVLPGELAKHAVSEGTKAVTKFTSA*AARPP 1481
VRLVLPGELAKHAVSEGTKAVTKFTS+*AARPP
Sbjct: 439 VRLVLPGELAKHAVSEGTKAVTKFTSS*AARPP 341
Score = 161 bits (346), Expect(2) = 6e-047
Identities = 72/93 (77%), Positives = 73/93 (78%)
Frame = -3 / +3
Query: 1480 GGRAA*AEVNLVTALVPSETACLASSPGRTRRTEVWISREVMVGFXXXXXXXXXXXXXXX 1301
GGRAA* EVNLVTALVPSETAC ASSPGRTRRTEVWISREVMVGF
Sbjct: 342 GGRAA*DEVNLVTALVPSETACFASSPGRTRRTEVWISREVMVGFLLYRASLAASAASFS 521
Query: 1300 XXXLMKEFMIDMALEEMPMSGCTCFSTLKM*IL 1202
LMKEFM+DMALEEMPMSGCTCFSTLKM*IL
Sbjct: 522 KMSLMKEFMMDMALEEMPMSGCTCFSTLKM*IL 620
Score = 97.7 bits (207), Expect(3) = 1e-038
Identities = 42/51 (82%), Positives = 45/51 (88%)
Frame = +2 / -3
Query: 1202 QDLHLQGAEAGAPGHWHLLQGHVDHELLH*RYLREARC*GRQARAL*QEAY 1354
QDLHLQGAEAGAPGH HLLQGHV HELLH R+LREAR GRQARA+ QEA+
Sbjct: 620 QDLHLQGAEAGAPGHRHLLQGHVHHELLHQRHLREARRRGRQARAVQQEAH 468
Score = 61.1 bits (127), Expect(3) = 1e-038
Identities = 25/28 (89%), Positives = 26/28 (92%)
Frame = +2 / -3
Query: 1400 RGARQARRLRGHQGRHQVHLGLGCAAAA 1483
RGAR+ARRL GHQGRHQVHL LGCAAAA
Sbjct: 422 RGAREARRL*GHQGRHQVHLVLGCAAAA 339
Score = 49.2 bits (101), Expect(2) = 6e-047
Identities = 23/39 (58%), Positives = 28/39 (71%)
Frame = -1 / +3
Query: 1644 EMIHIETYSWVE*APLRSYQITQLLQTDR*HT*KPAGSS 1528
+MIH T SWV+ APLR +QITQLLQ + H *KP S+
Sbjct: 171 QMIHK*TGSWVKLAPLRLHQITQLLQKENRHI*KPPTSN 287
Score = 44.1 bits (90), Expect(3) = 2e-053
Identities = 21/34 (61%), Positives = 24/34 (70%)
Frame = +2 / -1
Query: 1541 GFYVCYLSVCSNCVI**DRNGAYSTQLYVSM*II 1642
GF +C S CSNCVI* +RNGA TQL V + II
Sbjct: 274 GF*MCLFSFCSNCVI*CNRNGASLTQLPVYLWII 173
Score = 42.3 bits (86), Expect(3) = 1e-038
Identities = 20/36 (55%), Positives = 24/36 (66%)
Frame = +3 / -2
Query: 1536 LLASMYVIYLSVATVLSDRTVMVLIQPSYMFLCESS 1643
L+ S V SV T LSD VMVL+ PSY+F+C SS
Sbjct: 279 LVVSKCVCSPSVVTALSDVIVMVLV*PSYLFICGSS 172
Score = 22.6 bits (43), Expect(3) = 2e-053
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = +3 / -1
Query: 1476 PPLAGFSPVF 1505
PPLAGFS +F
Sbjct: 340 PPLAGFSRLF 311
>gb|CF431776.1|CF431776 NIT1_9_B03.b1_A002 Nitrogen-deficient seedlings Sorghum bicolor cDNA
clone NIT1_9_B03_A002 3', mRNA sequence
Length = 474
Score = 183 bits (395), Expect(3) = 2e-053
Identities = 81/93 (87%), Positives = 82/93 (88%)
Frame = +3 / +3
Query: 1203 KIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFXXXXXXXXXXXRYNKKPTITSREIQTS 1382
KIYIFKVLKQVHPDIGISSKAMSIMNSFINDIF RYNKKPTITSREIQTS
Sbjct: 3 KIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAAEAAKLARYNKKPTITSREIQTS 182
Query: 1383 VRLVLPGELAKHAVSEGTKAVTKFTSA*AARPP 1481
VRLVLPGELAKHAVSEGTKAVTKFTS+*AARPP
Sbjct: 183 VRLVLPGELAKHAVSEGTKAVTKFTSS*AARPP 281
Score = 161 bits (346), Expect(2) = 6e-047
Identities = 72/93 (77%), Positives = 73/93 (78%)
Frame = -3 / -3
Query: 1480 GGRAA*AEVNLVTALVPSETACLASSPGRTRRTEVWISREVMVGFXXXXXXXXXXXXXXX 1301
GGRAA* EVNLVTALVPSETAC ASSPGRTRRTEVWISREVMVGF
Sbjct: 280 GGRAA*DEVNLVTALVPSETACFASSPGRTRRTEVWISREVMVGFLLYRASLAASAASFS 101
Query: 1300 XXXLMKEFMIDMALEEMPMSGCTCFSTLKM*IL 1202
LMKEFM+DMALEEMPMSGCTCFSTLKM*IL
Sbjct: 100 KMSLMKEFMMDMALEEMPMSGCTCFSTLKM*IL 2
Score = 97.7 bits (207), Expect(3) = 1e-038
Identities = 42/51 (82%), Positives = 45/51 (88%)
Frame = +2 / +2
Query: 1202 QDLHLQGAEAGAPGHWHLLQGHVDHELLH*RYLREARC*GRQARAL*QEAY 1354
QDLHLQGAEAGAPGH HLLQGHV HELLH R+LREAR GRQARA+ QEA+
Sbjct: 2 QDLHLQGAEAGAPGHRHLLQGHVHHELLHQRHLREARRRGRQARAVQQEAH 154
Score = 61.1 bits (127), Expect(3) = 1e-038
Identities = 25/28 (89%), Positives = 26/28 (92%)
Frame = +2 / +2
Query: 1400 RGARQARRLRGHQGRHQVHLGLGCAAAA 1483
RGAR+ARRL GHQGRHQVHL LGCAAAA
Sbjct: 200 RGAREARRL*GHQGRHQVHLVLGCAAAA 283
Score = 49.2 bits (101), Expect(2) = 6e-047
Identities = 23/39 (58%), Positives = 28/39 (71%)
Frame = -1 / -3
Query: 1644 EMIHIETYSWVE*APLRSYQITQLLQTDR*HT*KPAGSS 1528
+MIH T SWV+ APLR +QITQLLQ + H *KP S+
Sbjct: 451 QMIHK*TGSWVKLAPLRLHQITQLLQKENRHI*KPPTSN 335
Score = 44.1 bits (90), Expect(3) = 2e-053
Identities = 21/34 (61%), Positives = 24/34 (70%)
Frame = +2 / +3
Query: 1541 GFYVCYLSVCSNCVI**DRNGAYSTQLYVSM*II 1642
GF +C S CSNCVI* +RNGA TQL V + II
Sbjct: 348 GF*MCLFSFCSNCVI*CNRNGASLTQLPVYLWII 449
Score = 42.3 bits (86), Expect(3) = 1e-038
Identities = 20/36 (55%), Positives = 24/36 (66%)
Frame = +3 / +1
Query: 1536 LLASMYVIYLSVATVLSDRTVMVLIQPSYMFLCESS 1643
L+ S V SV T LSD VMVL+ PSY+F+C SS
Sbjct: 343 LVVSKCVCSPSVVTALSDVIVMVLV*PSYLFICGSS 450
Score = 22.6 bits (43), Expect(3) = 2e-053
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = +3 / +3
Query: 1476 PPLAGFSPVF 1505
PPLAGFS +F
Sbjct: 282 PPLAGFSRLF 311
>gb|CD462726.1|CD462726 ETH1_39_B03.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_39_B03_A002 5', mRNA sequence
Length = 637
Score = 193 bits (416), Expect(3) = 8e-051
Identities = 85/97 (87%), Positives = 86/97 (88%)
Frame = +3 / +2
Query: 1191 VETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFXXXXXXXXXXXRYNKKPTITSRE 1370
VETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIF RYNKKPTITSRE
Sbjct: 275 VETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAAEAAKLARYNKKPTITSRE 454
Query: 1371 IQTSVRLVLPGELAKHAVSEGTKAVTKFTSA*AARPP 1481
IQTSVRLVLPGELAKHAVSEGTKAVTKFTS+*AARPP
Sbjct: 455 IQTSVRLVLPGELAKHAVSEGTKAVTKFTSS*AARPP 565
Score = 165 bits (355), Expect(2) = 6e-042
Identities = 75/97 (77%), Positives = 76/97 (78%)
Frame = -3 / -2
Query: 1480 GGRAA*AEVNLVTALVPSETACLASSPGRTRRTEVWISREVMVGFXXXXXXXXXXXXXXX 1301
GGRAA* EVNLVTALVPSETAC ASSPGRTRRTEVWISREVMVGF
Sbjct: 564 GGRAA*DEVNLVTALVPSETACFASSPGRTRRTEVWISREVMVGFLLYRASLAASAASFS 385
Query: 1300 XXXLMKEFMIDMALEEMPMSGCTCFSTLKM*IL*VST 1190
LMKEFM+DMALEEMPMSGCTCFSTLKM*IL VST
Sbjct: 384 KMSLMKEFMMDMALEEMPMSGCTCFSTLKM*ILYVST 274
Score = 100 bits (214), Expect(2) = 2e-032
Identities = 43/53 (81%), Positives = 47/53 (88%)
Frame = +2 / +1
Query: 1196 DLQDLHLQGAEAGAPGHWHLLQGHVDHELLH*RYLREARC*GRQARAL*QEAY 1354
D+QDLHLQGAEAGAPGH HLLQGHV HELLH R+LREAR GRQARA+ QEA+
Sbjct: 280 DVQDLHLQGAEAGAPGHRHLLQGHVHHELLHQRHLREARRRGRQARAVQQEAH 438
Score = 61.1 bits (127), Expect(2) = 2e-032
Identities = 25/28 (89%), Positives = 26/28 (92%)
Frame = +2 / +1
Query: 1400 RGARQARRLRGHQGRHQVHLGLGCAAAA 1483
RGAR+ARRL GHQGRHQVHL LGCAAAA
Sbjct: 484 RGAREARRL*GHQGRHQVHLVLGCAAAA 567
Score = 31.8 bits (63), Expect(2) = 6e-042
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = -2 / -2
Query: 1016 HRCGASWGLGCEG 978
HRCGASWG G G
Sbjct: 96 HRCGASWGSGARG 58
Score = 31.8 bits (63), Expect(3) = 8e-051
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +1 / +2
Query: 979 PSQPKPQLAPHRW 1017
P P+PQLAPHRW
Sbjct: 59 PLAPEPQLAPHRW 97
Score = 22.6 bits (43), Expect(3) = 8e-051
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = +3 / +2
Query: 1476 PPLAGFSPVF 1505
PPLAGFS +F
Sbjct: 566 PPLAGFSRLF 595
>gb|BZ341857.1|BZ341857 ic79b05.g1 WGS-SbicolorF (JM107 adapted methyl filtered) Sorghum
bicolor genomic clone ic79b05 5', DNA sequence
Length = 685
Score = 193 bits (416), Expect(3) = 9e-051
Identities = 85/97 (87%), Positives = 86/97 (88%)
Frame = +3 / -3
Query: 1191 VETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFXXXXXXXXXXXRYNKKPTITSRE 1370
VETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIF RYNKKPTITSRE
Sbjct: 356 VETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAAEAAKLARYNKKPTITSRE 177
Query: 1371 IQTSVRLVLPGELAKHAVSEGTKAVTKFTSA*AARPP 1481
IQTSVRLVLPGELAKHAVSEGTKAVTKFTS+*AARPP
Sbjct: 176 IQTSVRLVLPGELAKHAVSEGTKAVTKFTSS*AARPP 66
Score = 165 bits (355), Expect(2) = 7e-042
Identities = 75/97 (77%), Positives = 76/97 (78%)
Frame = -3 / +1
Query: 1480 GGRAA*AEVNLVTALVPSETACLASSPGRTRRTEVWISREVMVGFXXXXXXXXXXXXXXX 1301
GGRAA* EVNLVTALVPSETAC ASSPGRTRRTEVWISREVMVGF
Sbjct: 67 GGRAA*DEVNLVTALVPSETACFASSPGRTRRTEVWISREVMVGFLLYRASLAASAASFS 246
Query: 1300 XXXLMKEFMIDMALEEMPMSGCTCFSTLKM*IL*VST 1190
LMKEFM+DMALEEMPMSGCTCFSTLKM*IL VST
Sbjct: 247 KMSLMKEFMMDMALEEMPMSGCTCFSTLKM*ILYVST 357
Score = 100 bits (214), Expect(2) = 2e-032
Identities = 43/53 (81%), Positives = 47/53 (88%)
Frame = +2 / -2
Query: 1196 DLQDLHLQGAEAGAPGHWHLLQGHVDHELLH*RYLREARC*GRQARAL*QEAY 1354
D+QDLHLQGAEAGAPGH HLLQGHV HELLH R+LREAR GRQARA+ QEA+
Sbjct: 351 DVQDLHLQGAEAGAPGHRHLLQGHVHHELLHQRHLREARRRGRQARAVQQEAH 193
Score = 61.1 bits (127), Expect(2) = 2e-032
Identities = 25/28 (89%), Positives = 26/28 (92%)
Frame = +2 / -2
Query: 1400 RGARQARRLRGHQGRHQVHLGLGCAAAA 1483
RGAR+ARRL GHQGRHQVHL LGCAAAA
Sbjct: 147 RGAREARRL*GHQGRHQVHLVLGCAAAA 64
Score = 31.8 bits (63), Expect(2) = 7e-042
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = -2 / +3
Query: 1016 HRCGASWGLGCEG 978
HRCGASWG G G
Sbjct: 534 HRCGASWGSGARG 572
Score = 31.8 bits (63), Expect(3) = 9e-051
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +1 / -1
Query: 979 PSQPKPQLAPHRW 1017
P P+PQLAPHRW
Sbjct: 571 PLAPEPQLAPHRW 533
Score = 22.6 bits (43), Expect(3) = 9e-051
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = +3 / -3
Query: 1476 PPLAGFSPVF 1505
PPLAGFS +F
Sbjct: 65 PPLAGFSRLF 36
>gb|CN128032.1|CN128032 RHOH1_26_C09.g1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_26_C09_A002 5', mRNA sequence
Length = 815
Score = 151 bits (325), Expect(2) = 2e-050
Identities = 54/140 (38%), Positives = 87/140 (62%)
Frame = +3 / +2
Query: 105 YGYAAGSPNGPENWGKLSPAYKLCGEGKQQSPIDIVTKQAVPAATLDTLNRTYGATNATL 284
+ Y G NGP +WG + + C G+ QSPID+ ++ +L L +Y +A++
Sbjct: 170 FSYVVGDENGPAHWGGIKAEWANCSAGRMQSPIDLSHERVSLVRSLGYLTHSYRPADASI 349
Query: 285 INDGHDITLALEGKVGTVTVNGKAYSFEKLHWHSPSDHTINGQRFPLELHLVHRSADGAL 464
+N GHDI + G G++ ++G AY ++HWHSP++HT++G+R+ +ELHLVH++
Sbjct: 350 VNRGHDIMVRFNGDAGSLVIHGTAYYLRQMHWHSPTEHTVDGRRYDMELHLVHQTLANKT 529
Query: 465 AVIGILYQLGAPDSFYYQLK 524
AVIGILY++G D F L+
Sbjct: 530 AVIGILYEIGGEDPFLQALE 589
Score = 70.3 bits (147), Expect(2) = 2e-050
Identities = 25/61 (40%), Positives = 41/61 (67%)
Frame = +3 / +2
Query: 564 AEEEESRVEAGLIHLRSLQKRTGSYFRYTGSLTVPPCTENVVWSVLGKVRQISQDQLQLL 743
A+ ++ G++ R + R Y+RY GSLT PPCTE V+W+V+ +VR +S+ Q++LL
Sbjct: 608 ADRKDREEPVGVVDPRRARGRASVYYRYMGSLTTPPCTEGVIWTVVKRVRTVSKHQMELL 787
Query: 744 K 746
+
Sbjct: 788 R 790
>gb|CW410848.1|CW410848 fsbb001f105m09k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f105m09, DNA
sequence
Length = 598
Score = 191 bits (412), Expect(2) = 9e-050
Identities = 84/97 (86%), Positives = 85/97 (87%)
Frame = +3 / +3
Query: 1191 VETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFXXXXXXXXXXXRYNKKPTITSRE 1370
VETYKIYIFKVLKQVHPDIGISSK MSIMNSFINDIF RYNKKPTITSRE
Sbjct: 252 VETYKIYIFKVLKQVHPDIGISSKGMSIMNSFINDIFEKLAAEAAKLARYNKKPTITSRE 431
Query: 1371 IQTSVRLVLPGELAKHAVSEGTKAVTKFTSA*AARPP 1481
IQTSVRLVLPGELAKHAVSEGTKAVTKFTS+*AARPP
Sbjct: 432 IQTSVRLVLPGELAKHAVSEGTKAVTKFTSS*AARPP 542
Score = 163 bits (350), Expect(2) = 3e-041
Identities = 74/97 (76%), Positives = 75/97 (77%)
Frame = -3 / -1
Query: 1480 GGRAA*AEVNLVTALVPSETACLASSPGRTRRTEVWISREVMVGFXXXXXXXXXXXXXXX 1301
GGRAA* EVNLVTALVPSETAC ASSPGRTRRTEVWISREVMVGF
Sbjct: 541 GGRAA*DEVNLVTALVPSETACFASSPGRTRRTEVWISREVMVGFLLYRASLAASAASFS 362
Query: 1300 XXXLMKEFMIDMALEEMPMSGCTCFSTLKM*IL*VST 1190
LMKEFM+DM LEEMPMSGCTCFSTLKM*IL VST
Sbjct: 361 KMSLMKEFMMDMPLEEMPMSGCTCFSTLKM*ILYVST 251
Score = 100 bits (214), Expect(2) = 2e-032
Identities = 43/53 (81%), Positives = 47/53 (88%)
Frame = +2 / +2
Query: 1196 DLQDLHLQGAEAGAPGHWHLLQGHVDHELLH*RYLREARC*GRQARAL*QEAY 1354
D+QDLHLQGAEAGAPGH HLLQGHV HELLH R+LREAR GRQARA+ QEA+
Sbjct: 257 DVQDLHLQGAEAGAPGHRHLLQGHVHHELLHQRHLREARRRGRQARAVQQEAH 415
Score = 61.1 bits (127), Expect(2) = 2e-032
Identities = 25/28 (89%), Positives = 26/28 (92%)
Frame = +2 / +2
Query: 1400 RGARQARRLRGHQGRHQVHLGLGCAAAA 1483
RGAR+ARRL GHQGRHQVHL LGCAAAA
Sbjct: 461 RGAREARRL*GHQGRHQVHLVLGCAAAA 544
Score = 31.8 bits (63), Expect(2) = 3e-041
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = -2 / -3
Query: 1016 HRCGASWGLGCEG 978
HRCGASWG G G
Sbjct: 74 HRCGASWGSGARG 36
Score = 31.8 bits (63), Expect(2) = 9e-050
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +1 / +1
Query: 979 PSQPKPQLAPHRW 1017
P P+PQLAPHRW
Sbjct: 37 PLAPEPQLAPHRW 75
>gb|CN135888.1|CN135888 OX1_39_C03.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_39_C03_A002 5', mRNA sequence
Length = 788
Score = 151 bits (325), Expect(2) = 2e-049
Identities = 54/140 (38%), Positives = 87/140 (62%)
Frame = +3 / +2
Query: 105 YGYAAGSPNGPENWGKLSPAYKLCGEGKQQSPIDIVTKQAVPAATLDTLNRTYGATNATL 284
+ Y G NGP +WG + + C G+ QSPID+ ++ +L L +Y +A++
Sbjct: 170 FSYVVGDENGPAHWGGIKAEWANCSAGRMQSPIDLSHERVSLVRSLGYLTHSYRPADASI 349
Query: 285 INDGHDITLALEGKVGTVTVNGKAYSFEKLHWHSPSDHTINGQRFPLELHLVHRSADGAL 464
+N GHDI + G G++ ++G AY ++HWHSP++HT++G+R+ +ELHLVH++
Sbjct: 350 VNRGHDIMVRFNGDAGSLVIHGTAYYLRQMHWHSPTEHTVDGRRYDMELHLVHQTLANKT 529
Query: 465 AVIGILYQLGAPDSFYYQLK 524
AVIGILY++G D F L+
Sbjct: 530 AVIGILYEIGGEDPFLQALE 589
Score = 67.5 bits (141), Expect(2) = 2e-049
Identities = 24/60 (40%), Positives = 39/60 (65%)
Frame = +3 / +2
Query: 564 AEEEESRVEAGLIHLRSLQKRTGSYFRYTGSLTVPPCTENVVWSVLGKVRQISQDQLQLL 743
A+ ++ G++ R + R Y+RY GSLT PPCTE +W+V+ +VR +S+ Q++LL
Sbjct: 608 ADRKDREEPVGVVDPRRARGRASVYYRYMGSLTTPPCTEGAIWTVVKRVRTVSKHQMELL 787
>gb|BZ349181.1|BZ349181 hq88a09.g1 WGS-SbicolorF (JM107 adapted methyl filtered) Sorghum
bicolor genomic clone hq88a09 5', DNA sequence
Length = 724
Score = 164 bits (353), Expect(2) = 2e-049
Identities = 58/130 (44%), Positives = 87/130 (66%)
Frame = +3 / +3
Query: 105 YGYAAGSPNGPENWGKLSPAYKLCGEGKQQSPIDIVTKQAVPAATLDTLNRTYGATNATL 284
+ Y G+PNGPENWGK+ P + C G+ QSPID+ + A +L L Y AT+
Sbjct: 87 FSYIPGAPNGPENWGKIKPQWANCSVGRMQSPIDLSHELAKLVQSLGYLKTFYRPAEATI 266
Query: 285 INDGHDITLALEGKVGTVTVNGKAYSFEKLHWHSPSDHTINGQRFPLELHLVHRSADGAL 464
+N GHD+ ++ +G G++ +NG Y +LHWH+PS+HTI+G+R+ +ELHLVH++
Sbjct: 267 VNSGHDVMVSFKGDAGSLVINGTTYHLRQLHWHTPSEHTIDGRRYDMELHLVHQTLANKT 446
Query: 465 AVIGILYQLG 494
AVIG+LY++G
Sbjct: 447 AVIGVLYEIG 476
Score = 54.7 bits (113), Expect(2) = 2e-049
Identities = 21/44 (47%), Positives = 29/44 (65%)
Frame = +3 / +1
Query: 579 SRVEAGLIHLRSLQKRTGSYFRYTGSLTVPPCTENVVWSVLGKV 710
SR +G++ + +Y+RY GSLT PPCTE VVW+V+ KV
Sbjct: 544 SRRTSGVVDPNGARGSGSAYYRYMGSLTTPPCTEGVVWTVVRKV 675
>gb|BF480763.1|BF480763 FM1_14_F11.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum propinquum
cDNA, mRNA sequence
Length = 592
Score = 191 bits (412), Expect(2) = 3e-048
Identities = 85/98 (86%), Positives = 86/98 (87%)
Frame = +3 / +1
Query: 1191 VETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFXXXXXXXXXXXRYNKKPTITSRE 1370
VETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIF RYNKKPTITSRE
Sbjct: 157 VETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAAEAAKLARYNKKPTITSRE 336
Query: 1371 IQTSVRLVLPGELAKHAVSEGTKAVTKFTSA*AARPPL 1484
IQTSVRLVLPGELAKHAVSEGTKAVTKFTS+*AARP L
Sbjct: 337 IQTSVRLVLPGELAKHAVSEGTKAVTKFTSS*AARPSL 450
Score = 164 bits (352), Expect = 5e-039
Identities = 75/98 (76%), Positives = 76/98 (77%)
Frame = -3 / -3
Query: 1483 SGGRAA*AEVNLVTALVPSETACLASSPGRTRRTEVWISREVMVGFXXXXXXXXXXXXXX 1304
S GRAA* EVNLVTALVPSETAC ASSPGRTRRTEVWISREVMVGF
Sbjct: 449 SDGRAA*DEVNLVTALVPSETACFASSPGRTRRTEVWISREVMVGFLLYRASLAASAASF 270
Query: 1303 XXXXLMKEFMIDMALEEMPMSGCTCFSTLKM*IL*VST 1190
LMKEFM+DMALEEMPMSGCTCFSTLKM*IL VST
Sbjct: 269 SKMSLMKEFMMDMALEEMPMSGCTCFSTLKM*ILYVST 156
Score = 100 bits (214), Expect(2) = 7e-032
Identities = 43/53 (81%), Positives = 47/53 (88%)
Frame = +2 / +3
Query: 1196 DLQDLHLQGAEAGAPGHWHLLQGHVDHELLH*RYLREARC*GRQARAL*QEAY 1354
D+QDLHLQGAEAGAPGH HLLQGHV HELLH R+LREAR GRQARA+ QEA+
Sbjct: 162 DVQDLHLQGAEAGAPGHRHLLQGHVHHELLHQRHLREARRRGRQARAVQQEAH 320
Score = 59.3 bits (123), Expect(2) = 7e-032
Identities = 24/28 (85%), Positives = 25/28 (89%)
Frame = +2 / +3
Query: 1400 RGARQARRLRGHQGRHQVHLGLGCAAAA 1483
RGAR+ARRL GHQGRHQVHL LGCAA A
Sbjct: 366 RGAREARRL*GHQGRHQVHLVLGCAAVA 449
Score = 23.5 bits (45), Expect(2) = 3e-048
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +3 / +1
Query: 1476 PPLAGFSPVF 1505
PPLAGFS VF
Sbjct: 454 PPLAGFSCVF 483
>gb|CW197068.1|CW197068 104_621_11181494_116_36824_059 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11181494, DNA
sequence
Length = 678
Score = 159 bits (341), Expect(2) = 3e-047
Identities = 57/130 (43%), Positives = 88/130 (67%)
Frame = +3 / -2
Query: 105 YGYAAGSPNGPENWGKLSPAYKLCGEGKQQSPIDIVTKQAVPAATLDTLNRTYGATNATL 284
+ Y G +GPE+WG++ + CG G+ QSPID+ ++ +L L+ +Y A++
Sbjct: 605 FSYIPGDEHGPEHWGRIKEEWAACGTGRLQSPIDLSHERVSLVRSLGYLHHSYRPAEASI 426
Query: 285 INDGHDITLALEGKVGTVTVNGKAYSFEKLHWHSPSDHTINGQRFPLELHLVHRSADGAL 464
+N GHDI + EG G++ +NG AY ++LHWHSP++HT++G+R+ +ELHLVH SAD
Sbjct: 425 VNRGHDIMVRFEGDAGSLVINGTAYYLKQLHWHSPAEHTVDGRRYDMELHLVHESADKKA 246
Query: 465 AVIGILYQLG 494
AVI ILY++G
Sbjct: 245 AVIAILYEVG 216
Score = 52.4 bits (108), Expect(2) = 3e-047
Identities = 18/49 (36%), Positives = 29/49 (59%)
Frame = +3 / -2
Query: 564 AEEEESRVEAGLIHLRSLQKRTGSYFRYTGSLTVPPCTENVVWSVLGKV 710
A+ + G++ R + Y+RY GSLT PPCTE V+W+++ +V
Sbjct: 164 ADVRDREERVGVVDPRRARGTASVYYRYMGSLTAPPCTEGVIWTIVKRV 18
>gb|CW093545.1|CW093545 104_456_10999840_114_33066_052 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10999840, DNA
sequence
Length = 711
Score = 155 bits (333), Expect(2) = 4e-046
Identities = 56/125 (44%), Positives = 86/125 (68%)
Frame = +3 / -2
Query: 120 GSPNGPENWGKLSPAYKLCGEGKQQSPIDIVTKQAVPAATLDTLNRTYGATNATLINDGH 299
G +GPE+WG++ + CG G+ QSPID+ ++ +L L+ +Y A+++N GH
Sbjct: 704 GDEHGPEHWGRIKEEWAACGTGRLQSPIDLSHERVSLVRSLGYLHHSYRPAEASIVNRGH 525
Query: 300 DITLALEGKVGTVTVNGKAYSFEKLHWHSPSDHTINGQRFPLELHLVHRSADGALAVIGI 479
DI + EG G++ +NG AY ++LHWHSP++HT++G+R+ +ELHLVH SAD AVI I
Sbjct: 524 DIMVRFEGDAGSLVINGTAYYLKQLHWHSPAEHTVDGRRYDMELHLVHESADKKAAVIAI 345
Query: 480 LYQLG 494
LY++G
Sbjct: 344 LYEVG 330
Score = 52.4 bits (108), Expect(2) = 4e-046
Identities = 18/49 (36%), Positives = 29/49 (59%)
Frame = +3 / -2
Query: 564 AEEEESRVEAGLIHLRSLQKRTGSYFRYTGSLTVPPCTENVVWSVLGKV 710
A+ + G++ R + Y+RY GSLT PPCTE V+W+++ +V
Sbjct: 278 ADVRDREERVGVVDPRRARGTASVYYRYMGSLTAPPCTEGVIWTIVKRV 132
>gb|BE357369.1|BE357369 DG1_148_A05.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 616
Score = 186 bits (400), Expect = 1e-045
Identities = 84/101 (83%), Positives = 85/101 (84%)
Frame = +3 / +2
Query: 1191 VETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFXXXXXXXXXXXRYNKKPTITSRE 1370
VETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIF RYNKKPTITSRE
Sbjct: 227 VETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAAEAAKLARYNKKPTITSRE 406
Query: 1371 IQTSVRLVLPGELAKHAVSEGTKAVTKFTSA*AARPPLAGF 1493
IQTSVRLVLPGELAKHAVSEGTKAVTKFTS+*AA GF
Sbjct: 407 IQTSVRLVLPGELAKHAVSEGTKAVTKFTSS*AAAAWCYGF 529
Score = 152 bits (327), Expect = 1e-035
Identities = 70/94 (74%), Positives = 73/94 (77%)
Frame = -3 / -2
Query: 1471 AA*AEVNLVTALVPSETACLASSPGRTRRTEVWISREVMVGFXXXXXXXXXXXXXXXXXX 1292
AA* EVNLVTALVPSETACLASSPGRTRRT+VWISREVMVGF
Sbjct: 507 AA*EEVNLVTALVPSETACLASSPGRTRRTDVWISREVMVGFLL*RASLAASAASFSKMS 328
Query: 1291 LMKEFMIDMALEEMPMSGCTCFSTLKM*IL*VST 1190
LMKEFM+DMALEE+PMSGCTC STLKM*IL VST
Sbjct: 327 LMKEFMMDMALEEIPMSGCTCLSTLKM*ILYVST 226
Score = 102 bits (217), Expect(2) = 1e-028
Identities = 42/53 (79%), Positives = 47/53 (88%)
Frame = +2 / +1
Query: 1196 DLQDLHLQGAEAGAPGHWHLLQGHVDHELLH*RYLREARC*GRQARAL*QEAY 1354
D+QDLHLQGA+AGAPGHW+LLQGHV HELLH R+LREAR GRQAR L QEA+
Sbjct: 232 DVQDLHLQGAQAGAPGHWYLLQGHVHHELLHQRHLREARRRGRQARPLQQEAH 390
Score = 46.9 bits (96), Expect(2) = 1e-028
Identities = 20/31 (64%), Positives = 22/31 (70%)
Frame = +2 / +1
Query: 1397 SRGARQARRLRGHQGRHQVHLGLGCAAAACR 1489
SR ARQARRLRGHQG +QV+ LGC R
Sbjct: 433 SRRARQARRLRGHQGCYQVYFLLGCRCMVLR 525
>gb|CW306661.1|CW306661 104_792_11466961_148_35713_007 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11466961, DNA
sequence
Length = 711
Score = 184 bits (397), Expect = 3e-045
Identities = 82/97 (84%), Positives = 83/97 (85%)
Frame = +3 / +2
Query: 1191 VETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFXXXXXXXXXXXRYNKKPTITSRE 1370
VETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIF RYNKKPTITSRE
Sbjct: 17 VETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAAESAKLARYNKKPTITSRE 196
Query: 1371 IQTSVRLVLPGELAKHAVSEGTKAVTKFTSA*AARPP 1481
IQTSVRLVLPGELAKHAVSEGTKAVTKFTS+* R P
Sbjct: 197 IQTSVRLVLPGELAKHAVSEGTKAVTKFTSS*LGRLP 307
Score = 159 bits (341), Expect = 2e-037
Identities = 74/113 (65%), Positives = 79/113 (69%)
Frame = -3 / -1
Query: 1528 HLTTARDVNTGENPASGGRAA*AEVNLVTALVPSETACLASSPGRTRRTEVWISREVMVG 1349
H T + + G R +* EVNLVTALVPSETACLASSPGRTRRTEVWISR+VMVG
Sbjct: 354 HPTASTTTTRNQYKQEGRRPS*DEVNLVTALVPSETACLASSPGRTRRTEVWISRDVMVG 175
Query: 1348 FXXXXXXXXXXXXXXXXXXLMKEFMIDMALEEMPMSGCTCFSTLKM*IL*VST 1190
F LMKEFM+DMALEEMPMSGCTC STLKM*IL*VST
Sbjct: 174 FLL*RASLADSAASFSKMSLMKEFMMDMALEEMPMSGCTCLSTLKM*IL*VST 16
Score = 95.9 bits (203), Expect(2) = 2e-028
Identities = 42/53 (79%), Positives = 45/53 (84%)
Frame = +2 / +1
Query: 1196 DLQDLHLQGAEAGAPGHWHLLQGHVDHELLH*RYLREARC*GRQARAL*QEAY 1354
DLQDLHLQGA+AGAPGH HLLQGHV HELLH R+LREAR RQAR L QEA+
Sbjct: 22 DLQDLHLQGAQAGAPGHRHLLQGHVHHELLHQRHLREARRRVRQARPLQQEAH 180
Score = 52.4 bits (108), Expect(2) = 2e-028
Identities = 21/22 (95%), Positives = 21/22 (95%)
Frame = +2 / +1
Query: 1400 RGARQARRLRGHQGRHQVHLGL 1465
RGARQARRLRGHQGRHQVHL L
Sbjct: 226 RGARQARRLRGHQGRHQVHLVL 291
>gb|CD432572.1|CD432572 ETH1_30_E04.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_30_E04_A002 5', mRNA sequence
Length = 667
Score = 184 bits (397), Expect = 3e-045
Identities = 82/94 (87%), Positives = 83/94 (88%)
Frame = +3 / +1
Query: 1191 VETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFXXXXXXXXXXXRYNKKPTITSRE 1370
VETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIF RYNKKPTITSRE
Sbjct: 238 VETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAAEAAKLARYNKKPTITSRE 417
Query: 1371 IQTSVRLVLPGELAKHAVSEGTKAVTKFTSA*AA 1472
IQTSVRLVLPGELAKHAVSEGTKAVTKFTS+*AA
Sbjct: 418 IQTSVRLVLPGELAKHAVSEGTKAVTKFTSS*AA 519
Score = 152 bits (327), Expect = 1e-035
Identities = 70/94 (74%), Positives = 73/94 (77%)
Frame = -3 / -3
Query: 1471 AA*AEVNLVTALVPSETACLASSPGRTRRTEVWISREVMVGFXXXXXXXXXXXXXXXXXX 1292
AA* EVNLVTALVPSETACLASSPGRTRRT+VWISREVMVGF
Sbjct: 518 AA*EEVNLVTALVPSETACLASSPGRTRRTDVWISREVMVGFLL*RASLAASAASFSKMS 339
Query: 1291 LMKEFMIDMALEEMPMSGCTCFSTLKM*IL*VST 1190
LMKEFM+DMALEE+PMSGCTC STLKM*IL VST
Sbjct: 338 LMKEFMMDMALEEIPMSGCTCLSTLKM*ILYVST 237
Score = 102 bits (217), Expect(2) = 1e-028
Identities = 42/53 (79%), Positives = 47/53 (88%)
Frame = +2 / +3
Query: 1196 DLQDLHLQGAEAGAPGHWHLLQGHVDHELLH*RYLREARC*GRQARAL*QEAY 1354
D+QDLHLQGA+AGAPGHW+LLQGHV HELLH R+LREAR GRQAR L QEA+
Sbjct: 243 DVQDLHLQGAQAGAPGHWYLLQGHVHHELLHQRHLREARRRGRQARPLQQEAH 401
Score = 46.9 bits (96), Expect(2) = 1e-028
Identities = 20/31 (64%), Positives = 22/31 (70%)
Frame = +2 / +3
Query: 1397 SRGARQARRLRGHQGRHQVHLGLGCAAAACR 1489
SR ARQARRLRGHQG +QV+ LGC R
Sbjct: 444 SRRARQARRLRGHQGCYQVYFLLGCRCMVLR 536
>gb|CX607662.1|CX607662 ANR1_30_B07.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_30_B07_A002 3', mRNA sequence
Length = 607
Score = 184 bits (397), Expect = 3e-045
Identities = 82/94 (87%), Positives = 83/94 (88%)
Frame = +3 / +2
Query: 1191 VETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFXXXXXXXXXXXRYNKKPTITSRE 1370
VETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIF RYNKKPTITSRE
Sbjct: 164 VETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAAEAAKLARYNKKPTITSRE 343
Query: 1371 IQTSVRLVLPGELAKHAVSEGTKAVTKFTSA*AA 1472
IQTSVRLVLPGELAKHAVSEGTKAVTKFTS+*AA
Sbjct: 344 IQTSVRLVLPGELAKHAVSEGTKAVTKFTSS*AA 445
Score = 152 bits (327), Expect = 1e-035
Identities = 70/94 (74%), Positives = 73/94 (77%)
Frame = -3 / -2
Query: 1471 AA*AEVNLVTALVPSETACLASSPGRTRRTEVWISREVMVGFXXXXXXXXXXXXXXXXXX 1292
AA* EVNLVTALVPSETACLASSPGRTRRT+VWISREVMVGF
Sbjct: 444 AA*EEVNLVTALVPSETACLASSPGRTRRTDVWISREVMVGFLL*RASLAASAASFSKMS 265
Query: 1291 LMKEFMIDMALEEMPMSGCTCFSTLKM*IL*VST 1190
LMKEFM+DMALEE+PMSGCTC STLKM*IL VST
Sbjct: 264 LMKEFMMDMALEEIPMSGCTCLSTLKM*ILYVST 163
Score = 96.8 bits (205), Expect(2) = 2e-026
Identities = 39/53 (73%), Positives = 44/53 (83%)
Frame = +2 / +1
Query: 1196 DLQDLHLQGAEAGAPGHWHLLQGHVDHELLH*RYLREARC*GRQARAL*QEAY 1354
D+QDLH QGA+AGAPGHW+ LQGHV HELLH R+ REAR GRQAR L QEA+
Sbjct: 169 DVQDLHFQGAQAGAPGHWYFLQGHVHHELLHQRHFREARRRGRQARPLQQEAH 327
Score = 45.1 bits (92), Expect(2) = 2e-026
Identities = 19/31 (61%), Positives = 21/31 (67%)
Frame = +2 / +1
Query: 1397 SRGARQARRLRGHQGRHQVHLGLGCAAAACR 1489
SR ARQARR RGHQG +QV+ LGC R
Sbjct: 370 SRRARQARRFRGHQGCYQVYFLLGCRCMVLR 462
>gb|CN151138.1|CN151138 WOUND1_73_D06.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_73_D06_A002 5', mRNA sequence
Length = 807
Score = 89.0 bits (188), Expect(3) = 3e-045
Identities = 31/60 (51%), Positives = 47/60 (78%)
Frame = +3 / +3
Query: 318 EGKVGTVTVNGKAYSFEKLHWHSPSDHTINGQRFPLELHLVHRSADGALAVIGILYQLGA 497
+G G+V ++GK Y +++H HSPS+HTING+RFP+ELH+VH S DG + V+ +LY+ G+
Sbjct: 417 DGAAGSVRIDGKVYWLKQMH*HSPSEHTINGRRFPVELHMVHASDDGNVTVVAMLYRFGS 596
Score = 68.0 bits (142), Expect(3) = 3e-045
Identities = 29/67 (43%), Positives = 39/67 (58%)
Frame = +3 / +3
Query: 132 GPENWGKLSPAYKLCGEGKQQSPIDIVTKQAVPAATLDTLNRTYGATNATLINDGHDITL 311
GP +WG LSP ++ C G QSPIDI T +AV L L+R Y NATL+++ +I L
Sbjct: 222 GPAHWGSLSPNFRQCARGTHQSPIDISTAEAVLNPGLQPLHRDYTVANATLVDNVFNIAL 401
Query: 312 ALEGKVG 332
+ G
Sbjct: 402 RFDDDDG 422
Score = 66.1 bits (138), Expect(3) = 3e-045
Identities = 26/68 (38%), Positives = 41/68 (60%)
Frame = +3 / +3
Query: 498 PDSFYYQLKRQLGEMAQDRCDFAEEEESRVEAGLIHLRSLQKRTGSYFRYTGSLTVPPCT 677
PD +Q++ +L + + C E +V AG + L SL+ + +Y+RY S T PPCT
Sbjct: 600 PDPLLWQIQDKLAALYTEGCTAEEGGGGQVPAGDVSLWSLRLHSHTYYRYVXSFTTPPCT 779
Query: 678 ENVVWSVL 701
E+V+WSV+
Sbjct: 780 EDVIWSVM 803
>gb|CF431835.1|CF431835 NIT1_9_B03.g1_A002 Nitrogen-deficient seedlings Sorghum bicolor cDNA
clone NIT1_9_B03_A002 5', mRNA sequence
Length = 466
Score = 155 bits (334), Expect(3) = 5e-045
Identities = 69/81 (85%), Positives = 70/81 (86%)
Frame = +3 / +2
Query: 1239 PDIGISSKAMSIMNSFINDIFXXXXXXXXXXXRYNKKPTITSREIQTSVRLVLPGELAKH 1418
PDIGISSKAMSIMNSFINDIF RYNKKPTITSREIQTSVRLVLPGELAKH
Sbjct: 2 PDIGISSKAMSIMNSFINDIFEKLAAEAAKLARYNKKPTITSREIQTSVRLVLPGELAKH 181
Query: 1419 AVSEGTKAVTKFTSA*AARPP 1481
AVSEGTKAVTKFTS+*AARPP
Sbjct: 182 AVSEGTKAVTKFTSS*AARPP 244
Score = 133 bits (285), Expect(2) = 1e-038
Identities = 60/81 (74%), Positives = 61/81 (75%)
Frame = -3 / -2
Query: 1480 GGRAA*AEVNLVTALVPSETACLASSPGRTRRTEVWISREVMVGFXXXXXXXXXXXXXXX 1301
GGRAA* EVNLVTALVPSETAC ASSPGRTRRTEVWISREVMVGF
Sbjct: 243 GGRAA*DEVNLVTALVPSETACFASSPGRTRRTEVWISREVMVGFLLYRASLAASAASFS 64
Query: 1300 XXXLMKEFMIDMALEEMPMSG 1238
LMKEFM+DMALEEMPMSG
Sbjct: 63 KMSLMKEFMMDMALEEMPMSG 1
Score = 69.8 bits (146), Expect(3) = 2e-030
Identities = 30/39 (76%), Positives = 33/39 (84%)
Frame = +2 / +1
Query: 1238 PGHWHLLQGHVDHELLH*RYLREARC*GRQARAL*QEAY 1354
PGH HLLQGHV HELLH R+LREAR GRQARA+ QEA+
Sbjct: 1 PGHRHLLQGHVHHELLHQRHLREARRRGRQARAVQQEAH 117
Score = 61.1 bits (127), Expect(3) = 2e-030
Identities = 25/28 (89%), Positives = 26/28 (92%)
Frame = +2 / +1
Query: 1400 RGARQARRLRGHQGRHQVHLGLGCAAAA 1483
RGAR+ARRL GHQGRHQVHL LGCAAAA
Sbjct: 163 RGAREARRL*GHQGRHQVHLVLGCAAAA 246
Score = 49.2 bits (101), Expect(2) = 1e-038
Identities = 23/39 (58%), Positives = 28/39 (71%)
Frame = -1 / -2
Query: 1644 EMIHIETYSWVE*APLRSYQITQLLQTDR*HT*KPAGSS 1528
+MIH T SWV+ APLR +QITQLLQ + H *KP S+
Sbjct: 414 QMIHK*TGSWVKLAPLRLHQITQLLQKENRHI*KPPTSN 298
Score = 44.1 bits (90), Expect(3) = 5e-045
Identities = 21/34 (61%), Positives = 24/34 (70%)
Frame = +2 / +2
Query: 1541 GFYVCYLSVCSNCVI**DRNGAYSTQLYVSM*II 1642
GF +C S CSNCVI* +RNGA TQL V + II
Sbjct: 311 GF*MCLFSFCSNCVI*CNRNGASLTQLPVYLWII 412
Score = 42.3 bits (86), Expect(3) = 2e-030
Identities = 20/36 (55%), Positives = 24/36 (66%)
Frame = +3 / +3
Query: 1536 LLASMYVIYLSVATVLSDRTVMVLIQPSYMFLCESS 1643
L+ S V SV T LSD VMVL+ PSY+F+C SS
Sbjct: 306 LVVSKCVCSPSVVTALSDVIVMVLV*PSYLFICGSS 413
Score = 22.6 bits (43), Expect(3) = 5e-045
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = +3 / +2
Query: 1476 PPLAGFSPVF 1505
PPLAGFS +F
Sbjct: 245 PPLAGFSRLF 274
>gb|CN130340.1|CN130340 RHOH1_40_G09.g1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_40_G09_A002 5', mRNA sequence
Length = 729
Score = 151 bits (325), Expect(2) = 7e-045
Identities = 54/140 (38%), Positives = 87/140 (62%)
Frame = +3 / +1
Query: 105 YGYAAGSPNGPENWGKLSPAYKLCGEGKQQSPIDIVTKQAVPAATLDTLNRTYGATNATL 284
+ Y G NGP +WG + + C G+ QSPID+ ++ +L L +Y +A++
Sbjct: 163 FSYVVGDENGPAHWGGIKAEWANCSAGRMQSPIDLSHERVSLVRSLGYLTHSYRPADASI 342
Query: 285 INDGHDITLALEGKVGTVTVNGKAYSFEKLHWHSPSDHTINGQRFPLELHLVHRSADGAL 464
+N GHDI + G G++ ++G AY ++HWHSP++HT++G+R+ +ELHLVH++
Sbjct: 343 VNRGHDIMVRFNGDAGSLVIHGTAYYLRQMHWHSPTEHTVDGRRYDMELHLVHQTLANKT 522
Query: 465 AVIGILYQLGAPDSFYYQLK 524
AVIGILY++G D F L+
Sbjct: 523 AVIGILYEIGGEDPFLQALE 582
Score = 51.9 bits (107), Expect(2) = 7e-045
Identities = 18/43 (41%), Positives = 26/43 (60%)
Frame = +3 / +1
Query: 564 AEEEESRVEAGLIHLRSLQKRTGSYFRYTGSLTVPPCTENVVW 692
A+ ++ G++ R + R Y+RY GSLT PPCTE V+W
Sbjct: 601 ADRKDREEPVGVVDPRRARGRASVYYRYMGSLTTPPCTEGVIW 729
>gb|CW188377.1|CW188377 104_608_11172997_148_36734_061 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11172997, DNA
sequence
Length = 707
Score = 183 bits (394), Expect = 8e-045
Identities = 82/100 (82%), Positives = 84/100 (84%)
Frame = +3 / +2
Query: 1191 VETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFXXXXXXXXXXXRYNKKPTITSRE 1370
VETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIF RYNKKPTITSRE
Sbjct: 281 VETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAAEAAKLARYNKKPTITSRE 460
Query: 1371 IQTSVRLVLPGELAKHAVSEGTKAVTKFTSA*AARPPLAG 1490
IQTSVRLVLPGELAKHAVSEGTKAVTKFTS+* + L G
Sbjct: 461 IQTSVRLVLPGELAKHAVSEGTKAVTKFTSS*ISLAVLCG 580
Score = 152 bits (327), Expect = 1e-035
Identities = 71/100 (71%), Positives = 74/100 (74%)
Frame = -3 / -3
Query: 1489 PASGGRAA*AEVNLVTALVPSETACLASSPGRTRRTEVWISREVMVGFXXXXXXXXXXXX 1310
P S + * EVNLVTALVPSETACLASSPGRTRRT+VWIS EVMVGF
Sbjct: 579 PHSTAKLI*DEVNLVTALVPSETACLASSPGRTRRTDVWISLEVMVGFLL*RASLAASAA 400
Query: 1309 XXXXXXLMKEFMIDMALEEMPMSGCTCFSTLKM*IL*VST 1190
LMKEFM+DMALEEMPMSGCTC STLKM*IL*VST
Sbjct: 399 SFSKMSLMKEFMMDMALEEMPMSGCTCLSTLKM*IL*VST 280
Score = 97.7 bits (207), Expect(2) = 1e-027
Identities = 43/53 (81%), Positives = 46/53 (86%)
Frame = +2 / +1
Query: 1196 DLQDLHLQGAEAGAPGHWHLLQGHVDHELLH*RYLREARC*GRQARAL*QEAY 1354
DLQDLHLQGA+AGAP H HLLQGHV HELLH R+LREAR GRQARAL QEA+
Sbjct: 286 DLQDLHLQGAQAGAP*HRHLLQGHVHHELLHQRHLREARRRGRQARALQQEAH 444
Score = 48.3 bits (99), Expect(2) = 1e-027
Identities = 19/20 (95%), Positives = 19/20 (95%)
Frame = +2 / +1
Query: 1400 RGARQARRLRGHQGRHQVHL 1459
R ARQARRLRGHQGRHQVHL
Sbjct: 490 RRARQARRLRGHQGRHQVHL 549
>gb|AI724242.1|AI724242 RHIZ1_8_B12.y2_A001 Rhizome1 (RHIZ1) Sorghum halepense cDNA, mRNA
sequence
Length = 448
Score = 182 bits (393), Expect = 1e-044
Identities = 81/94 (86%), Positives = 82/94 (87%)
Frame = +3 / +2
Query: 1191 VETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFXXXXXXXXXXXRYNKKPTITSRE 1370
VETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIF RYNKKPTITSRE
Sbjct: 20 VETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAAEAAKLARYNKKPTITSRE 199
Query: 1371 IQTSVRLVLPGELAKHAVSEGTKAVTKFTSA*AA 1472
IQTSVRLVLPGELAKHAVSEGTKAVTKFTS+* A
Sbjct: 200 IQTSVRLVLPGELAKHAVSEGTKAVTKFTSS*VA 301
Score = 150 bits (322), Expect = 7e-035
Identities = 69/94 (73%), Positives = 72/94 (76%)
Frame = -3 / -2
Query: 1471 AA*AEVNLVTALVPSETACLASSPGRTRRTEVWISREVMVGFXXXXXXXXXXXXXXXXXX 1292
A * EVNLVTALVPSETACLASSPGRTRRTEVWISREVMVGF
Sbjct: 300 AT*DEVNLVTALVPSETACLASSPGRTRRTEVWISREVMVGFLL*RASLAASAASFSKMS 121
Query: 1291 LMKEFMIDMALEEMPMSGCTCFSTLKM*IL*VST 1190
LMKEFM+DMAL+E+PMSGCTC STLKM*IL VST
Sbjct: 120 LMKEFMMDMALDEIPMSGCTCLSTLKM*ILYVST 19
Score = 100 bits (214), Expect(2) = 2e-027
Identities = 41/53 (77%), Positives = 47/53 (88%)
Frame = +2 / +1
Query: 1196 DLQDLHLQGAEAGAPGHWHLLQGHVDHELLH*RYLREARC*GRQARAL*QEAY 1354
D+QDLHLQGA+AGAPGHW+L+QGHV HELLH R+LREAR GRQAR L QEA+
Sbjct: 25 DVQDLHLQGAQAGAPGHWYLVQGHVHHELLHQRHLREARRRGRQARPLQQEAH 183
Score = 44.1 bits (90), Expect(2) = 2e-027
Identities = 19/31 (61%), Positives = 21/31 (67%)
Frame = +2 / +1
Query: 1397 SRGARQARRLRGHQGRHQVHLGLGCAAAACR 1489
SR ARQARRL GHQG +QV+ LGC R
Sbjct: 226 SRRARQARRL*GHQGGYQVYFILGCCCTVLR 318
>gb|CX607748.1|CX607748 ANR1_30_B07.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_30_B07_A002 5', mRNA sequence
Length = 644
Score = 182 bits (393), Expect = 1e-044
Identities = 81/94 (86%), Positives = 83/94 (88%)
Frame = +3 / +3
Query: 1191 VETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFXXXXXXXXXXXRYNKKPTITSRE 1370
VETYKIYIFKVLKQVHPDIGISS+AMSIMNSFINDIF RYNKKPTITSRE
Sbjct: 234 VETYKIYIFKVLKQVHPDIGISSEAMSIMNSFINDIFEKLAAEAAKLARYNKKPTITSRE 413
Query: 1371 IQTSVRLVLPGELAKHAVSEGTKAVTKFTSA*AA 1472
IQTSVRLVLPGELAKHAVSEGTKAVTKFTS+*AA
Sbjct: 414 IQTSVRLVLPGELAKHAVSEGTKAVTKFTSS*AA 515
Score = 149 bits (321), Expect = 9e-035
Identities = 69/94 (73%), Positives = 72/94 (76%)
Frame = -3 / -2
Query: 1471 AA*AEVNLVTALVPSETACLASSPGRTRRTEVWISREVMVGFXXXXXXXXXXXXXXXXXX 1292
AA* EVNLVTALVPSETACLASSPGRTRRT+VWISREVMVGF
Sbjct: 514 AA*EEVNLVTALVPSETACLASSPGRTRRTDVWISREVMVGFLL*RASLAASAASFSKMS 335
Query: 1291 LMKEFMIDMALEEMPMSGCTCFSTLKM*IL*VST 1190
LMKEFM+DMA EE+PMSGCTC STLKM*IL VST
Sbjct: 334 LMKEFMMDMASEEIPMSGCTCLSTLKM*ILYVST 233
Score = 100 bits (213), Expect(2) = 5e-028
Identities = 41/53 (77%), Positives = 47/53 (88%)
Frame = +2 / +2
Query: 1196 DLQDLHLQGAEAGAPGHWHLLQGHVDHELLH*RYLREARC*GRQARAL*QEAY 1354
D+QDLHLQGA+AGAPGHW+LL+GHV HELLH R+LREAR GRQAR L QEA+
Sbjct: 239 DVQDLHLQGAQAGAPGHWYLLRGHVHHELLHQRHLREARRRGRQARPLQQEAH 397
Score = 46.9 bits (96), Expect(2) = 5e-028
Identities = 20/31 (64%), Positives = 22/31 (70%)
Frame = +2 / +2
Query: 1397 SRGARQARRLRGHQGRHQVHLGLGCAAAACR 1489
SR ARQARRLRGHQG +QV+ LGC R
Sbjct: 440 SRRARQARRLRGHQGCYQVYFLLGCRCMVLR 532
>gb|CW128767.1|CW128767 104_510_11114194_148_34755_039 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11114194, DNA
sequence
Length = 652
Score = 182 bits (392), Expect = 1e-044
Identities = 81/93 (87%), Positives = 82/93 (88%)
Frame = +3 / -3
Query: 1191 VETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFXXXXXXXXXXXRYNKKPTITSRE 1370
VETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIF RYNKKPTITSRE
Sbjct: 467 VETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAGEAAKLARYNKKPTITSRE 288
Query: 1371 IQTSVRLVLPGELAKHAVSEGTKAVTKFTSA*A 1469
IQTSVRLVLPGELAKHAVSEGTKAVTKFTS+*A
Sbjct: 287 IQTSVRLVLPGELAKHAVSEGTKAVTKFTSS*A 189
Score = 153 bits (328), Expect = 1e-035
Identities = 71/93 (76%), Positives = 72/93 (77%)
Frame = -3 / +1
Query: 1468 A*AEVNLVTALVPSETACLASSPGRTRRTEVWISREVMVGFXXXXXXXXXXXXXXXXXXL 1289
A* EVNLVTALVPSETACLASSPGRTRRTEVWISREVMVGF L
Sbjct: 190 A*DEVNLVTALVPSETACLASSPGRTRRTEVWISREVMVGFLL*RASLAASPASFSKMSL 369
Query: 1288 MKEFMIDMALEEMPMSGCTCFSTLKM*IL*VST 1190
M EFM+DMALEEMPMSGCTCFSTLKM*IL VST
Sbjct: 370 MNEFMMDMALEEMPMSGCTCFSTLKM*ILYVST 468
Score = 98.7 bits (209), Expect(2) = 9e-029
Identities = 42/53 (79%), Positives = 46/53 (86%)
Frame = +2 / -2
Query: 1196 DLQDLHLQGAEAGAPGHWHLLQGHVDHELLH*RYLREARC*GRQARAL*QEAY 1354
D+QDLHLQGAEAGAPGH HLLQGHV HEL+H R+LREAR GRQAR L QEA+
Sbjct: 462 DVQDLHLQGAEAGAPGHRHLLQGHVHHELVHQRHLREARRRGRQARPLQQEAH 304
Score = 51.0 bits (105), Expect(2) = 9e-029
Identities = 21/23 (91%), Positives = 21/23 (91%)
Frame = +2 / -2
Query: 1400 RGARQARRLRGHQGRHQVHLGLG 1468
RGARQARRL GHQGRHQVHL LG
Sbjct: 258 RGARQARRL*GHQGRHQVHLVLG 190
>gb|AI723845.1|AI723845 RHIZ1_28_B06.y1_A001 Rhizome1 (RHIZ1) Sorghum halepense cDNA, mRNA
sequence
Length = 557
Score = 182 bits (392), Expect = 1e-044
Identities = 81/93 (87%), Positives = 82/93 (88%)
Frame = +3 / +1
Query: 1191 VETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFXXXXXXXXXXXRYNKKPTITSRE 1370
VETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIF RYNKKPTITSRE
Sbjct: 7 VETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAGEAAKLARYNKKPTITSRE 186
Query: 1371 IQTSVRLVLPGELAKHAVSEGTKAVTKFTSA*A 1469
IQTSVRLVLPGELAKHAVSEGTKAVTKFTS+*A
Sbjct: 187 IQTSVRLVLPGELAKHAVSEGTKAVTKFTSS*A 285
Score = 153 bits (329), Expect = 7e-036
Identities = 71/93 (76%), Positives = 73/93 (78%)
Frame = -3 / -1
Query: 1468 A*AEVNLVTALVPSETACLASSPGRTRRTEVWISREVMVGFXXXXXXXXXXXXXXXXXXL 1289
A* EVNLVTALVPSETACLASSPGRTRRTEVWISREVMVGF L
Sbjct: 284 A*DEVNLVTALVPSETACLASSPGRTRRTEVWISREVMVGFLL*RASLAASPASFSKMSL 105
Query: 1288 MKEFMIDMALEEMPMSGCTCFSTLKM*IL*VST 1190
MKEFM+DMALEE+PMSGCTCFSTLKM*IL VST
Sbjct: 104 MKEFMMDMALEEIPMSGCTCFSTLKM*ILYVST 6
Score = 93.2 bits (197), Expect(2) = 4e-027
Identities = 41/53 (77%), Positives = 45/53 (84%)
Frame = +2 / +3
Query: 1196 DLQDLHLQGAEAGAPGHWHLLQGHVDHELLH*RYLREARC*GRQARAL*QEAY 1354
D+QDLHLQGAEAGAPGH +LLQGHV HELLH +LREAR GRQAR L QEA+
Sbjct: 12 DVQDLHLQGAEAGAPGHRYLLQGHVHHELLHQ*HLREARRRGRQARPLQQEAH 170
Score = 51.0 bits (105), Expect(2) = 4e-027
Identities = 21/23 (91%), Positives = 21/23 (91%)
Frame = +2 / +3
Query: 1400 RGARQARRLRGHQGRHQVHLGLG 1468
RGARQARRL GHQGRHQVHL LG
Sbjct: 216 RGARQARRL*GHQGRHQVHLVLG 284
>gb|BG240440.1|BG240440 OV1_30_A12.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 555
Score = 182 bits (392), Expect = 1e-044
Identities = 81/93 (87%), Positives = 82/93 (88%)
Frame = +3 / +2
Query: 1191 VETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFXXXXXXXXXXXRYNKKPTITSRE 1370
VETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIF RYNKKPTITSRE
Sbjct: 257 VETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAGEAAKLARYNKKPTITSRE 436
Query: 1371 IQTSVRLVLPGELAKHAVSEGTKAVTKFTSA*A 1469
IQTSVRLVLPGELAKHAVSEGTKAVTKFTS+*A
Sbjct: 437 IQTSVRLVLPGELAKHAVSEGTKAVTKFTSS*A 535
Score = 153 bits (328), Expect = 1e-035
Identities = 71/93 (76%), Positives = 72/93 (77%)
Frame = -3 / -1
Query: 1468 A*AEVNLVTALVPSETACLASSPGRTRRTEVWISREVMVGFXXXXXXXXXXXXXXXXXXL 1289
A* EVNLVTALVPSETACLASSPGRTRRTEVWISREVMVGF L
Sbjct: 534 A*DEVNLVTALVPSETACLASSPGRTRRTEVWISREVMVGFLL*RASLAASPASFSKMSL 355
Query: 1288 MKEFMIDMALEEMPMSGCTCFSTLKM*IL*VST 1190
M EFM+DMALEEMPMSGCTCFSTLKM*IL VST
Sbjct: 354 MNEFMMDMALEEMPMSGCTCFSTLKM*ILYVST 256
Score = 98.7 bits (209), Expect(2) = 9e-029
Identities = 42/53 (79%), Positives = 46/53 (86%)
Frame = +2 / +1
Query: 1196 DLQDLHLQGAEAGAPGHWHLLQGHVDHELLH*RYLREARC*GRQARAL*QEAY 1354
D+QDLHLQGAEAGAPGH HLLQGHV HEL+H R+LREAR GRQAR L QEA+
Sbjct: 262 DVQDLHLQGAEAGAPGHRHLLQGHVHHELVHQRHLREARRRGRQARPLQQEAH 420
Score = 51.0 bits (105), Expect(2) = 9e-029
Identities = 21/23 (91%), Positives = 21/23 (91%)
Frame = +2 / +1
Query: 1400 RGARQARRLRGHQGRHQVHLGLG 1468
RGARQARRL GHQGRHQVHL LG
Sbjct: 466 RGARQARRL*GHQGRHQVHLVLG 534
>gb|BG488106.1|BG488106 RHIZ2_63_D10.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 514
Score = 182 bits (392), Expect = 1e-044
Identities = 81/93 (87%), Positives = 82/93 (88%)
Frame = +3 / +3
Query: 1191 VETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFXXXXXXXXXXXRYNKKPTITSRE 1370
VETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIF RYNKKPTITSRE
Sbjct: 135 VETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAGEAAKLARYNKKPTITSRE 314
Query: 1371 IQTSVRLVLPGELAKHAVSEGTKAVTKFTSA*A 1469
IQTSVRLVLPGELAKHAVSEGTKAVTKFTS+*A
Sbjct: 315 IQTSVRLVLPGELAKHAVSEGTKAVTKFTSS*A 413
Score = 153 bits (329), Expect = 7e-036
Identities = 71/93 (76%), Positives = 73/93 (78%)
Frame = -3 / -1
Query: 1468 A*AEVNLVTALVPSETACLASSPGRTRRTEVWISREVMVGFXXXXXXXXXXXXXXXXXXL 1289
A* EVNLVTALVPSETACLASSPGRTRRTEVWISREVMVGF L
Sbjct: 412 A*DEVNLVTALVPSETACLASSPGRTRRTEVWISREVMVGFLL*RASLAASPASFSKMSL 233
Query: 1288 MKEFMIDMALEEMPMSGCTCFSTLKM*IL*VST 1190
MKEFM+DMALEE+PMSGCTCFSTLKM*IL VST
Sbjct: 232 MKEFMMDMALEEIPMSGCTCFSTLKM*ILYVST 134
Score = 93.2 bits (197), Expect(2) = 4e-027
Identities = 41/53 (77%), Positives = 45/53 (84%)
Frame = +2 / +2
Query: 1196 DLQDLHLQGAEAGAPGHWHLLQGHVDHELLH*RYLREARC*GRQARAL*QEAY 1354
D+QDLHLQGAEAGAPGH +LLQGHV HELLH +LREAR GRQAR L QEA+
Sbjct: 140 DVQDLHLQGAEAGAPGHRYLLQGHVHHELLHQ*HLREARRRGRQARPLQQEAH 298
Score = 51.0 bits (105), Expect(2) = 4e-027
Identities = 21/23 (91%), Positives = 21/23 (91%)
Frame = +2 / +2
Query: 1400 RGARQARRLRGHQGRHQVHLGLG 1468
RGARQARRL GHQGRHQVHL LG
Sbjct: 344 RGARQARRL*GHQGRHQVHLVLG 412
>gb|BG488416.1|BG488416 RHIZ2_63_D10.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 556
Score = 182 bits (392), Expect = 1e-044
Identities = 81/93 (87%), Positives = 82/93 (88%)
Frame = +3 / +2
Query: 1191 VETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFXXXXXXXXXXXRYNKKPTITSRE 1370
VETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIF RYNKKPTITSRE
Sbjct: 263 VETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAGEAAKLARYNKKPTITSRE 442
Query: 1371 IQTSVRLVLPGELAKHAVSEGTKAVTKFTSA*A 1469
IQTSVRLVLPGELAKHAVSEGTKAVTKFTS+*A
Sbjct: 443 IQTSVRLVLPGELAKHAVSEGTKAVTKFTSS*A 541
Score = 153 bits (329), Expect = 7e-036
Identities = 71/93 (76%), Positives = 73/93 (78%)
Frame = -3 / -2
Query: 1468 A*AEVNLVTALVPSETACLASSPGRTRRTEVWISREVMVGFXXXXXXXXXXXXXXXXXXL 1289
A* EVNLVTALVPSETACLASSPGRTRRTEVWISREVMVGF L
Sbjct: 540 A*DEVNLVTALVPSETACLASSPGRTRRTEVWISREVMVGFLL*RASLAASPASFSKMSL 361
Query: 1288 MKEFMIDMALEEMPMSGCTCFSTLKM*IL*VST 1190
MKEFM+DMALEE+PMSGCTCFSTLKM*IL VST
Sbjct: 360 MKEFMMDMALEEIPMSGCTCFSTLKM*ILYVST 262
Score = 93.2 bits (197), Expect(2) = 4e-027
Identities = 41/53 (77%), Positives = 45/53 (84%)
Frame = +2 / +1
Query: 1196 DLQDLHLQGAEAGAPGHWHLLQGHVDHELLH*RYLREARC*GRQARAL*QEAY 1354
D+QDLHLQGAEAGAPGH +LLQGHV HELLH +LREAR GRQAR L QEA+
Sbjct: 268 DVQDLHLQGAEAGAPGHRYLLQGHVHHELLHQ*HLREARRRGRQARPLQQEAH 426
Score = 51.0 bits (105), Expect(2) = 4e-027
Identities = 21/23 (91%), Positives = 21/23 (91%)
Frame = +2 / +1
Query: 1400 RGARQARRLRGHQGRHQVHLGLG 1468
RGARQARRL GHQGRHQVHL LG
Sbjct: 472 RGARQARRL*GHQGRHQVHLVLG 540
>gb|CW105327.1|CW105327 104_474_11012845_116_34450_053 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11012845, DNA
sequence
Length = 612
Score = 182 bits (391), Expect = 2e-044
Identities = 81/95 (85%), Positives = 82/95 (86%)
Frame = +3 / -2
Query: 1191 VETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFXXXXXXXXXXXRYNKKPTITSRE 1370
VETYKIYIFKVLKQVHPDIGIS+KAMSIMNSFINDIF RYNKKPTITSRE
Sbjct: 455 VETYKIYIFKVLKQVHPDIGISAKAMSIMNSFINDIFEKLAQEAARLARYNKKPTITSRE 276
Query: 1371 IQTSVRLVLPGELAKHAVSEGTKAVTKFTSA*AAR 1475
IQTSVRLVLPGELAKHAVSEGTKAVTKFTSA* R
Sbjct: 275 IQTSVRLVLPGELAKHAVSEGTKAVTKFTSA*NGR 171
Score = 155 bits (333), Expect = 2e-036
Identities = 71/92 (77%), Positives = 73/92 (79%)
Frame = -3 / +1
Query: 1465 *AEVNLVTALVPSETACLASSPGRTRRTEVWISREVMVGFXXXXXXXXXXXXXXXXXXLM 1286
*AEVNLVTALVPSETACLASSPGRTRRTEVWISR+VMVGF LM
Sbjct: 181 *AEVNLVTALVPSETACLASSPGRTRRTEVWISRDVMVGFLLYLARRAASCASFSKMSLM 360
Query: 1285 KEFMIDMALEEMPMSGCTCFSTLKM*IL*VST 1190
KEFM+DMAL EMPMSGCTCFSTLKM*IL*VST
Sbjct: 361 KEFMMDMALAEMPMSGCTCFSTLKM*IL*VST 456
Score = 90.4 bits (191), Expect(2) = 1e-024
Identities = 39/53 (73%), Positives = 42/53 (79%)
Frame = +2 / -1
Query: 1196 DLQDLHLQGAEAGAPGHWHLLQGHVDHELLH*RYLREARC*GRQARAL*QEAY 1354
DLQDLHLQGAEAGAPGH HL QGHV HELLH R+LREAR G R + QEA+
Sbjct: 450 DLQDLHLQGAEAGAPGHRHLRQGHVHHELLHQRHLREARAGGGAPRQVQQEAH 292
Score = 45.5 bits (93), Expect(2) = 1e-024
Identities = 19/22 (86%), Positives = 19/22 (86%)
Frame = +2 / -1
Query: 1400 RGARQARRLRGHQGRHQVHLGL 1465
R ARQAR LRGHQGRHQVHL L
Sbjct: 246 RRARQARCLRGHQGRHQVHLRL 181
>gb|CW361905.1|CW361905 fsbb001f030l13f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f030l13, DNA
sequence
Length = 669
Score = 181 bits (390), Expect = 3e-044
Identities = 85/120 (70%), Positives = 90/120 (75%)
Frame = +3 / +2
Query: 1191 VETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFXXXXXXXXXXXRYNKKPTITSRE 1370
VETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIF RYNKKPTITSRE
Sbjct: 26 VETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAAEAAKLARYNKKPTITSRE 205
Query: 1371 IQTSVRLVLPGELAKHAVSEGTKAVTKFTSA*AARPPLAGFSPVFTSLAVVRCCCLLASM 1550
IQTSVRLVLPGELAKHAVSEGTKAVTKFTS+* L S + VV C+ ++
Sbjct: 206 IQTSVRLVLPGELAKHAVSEGTKAVTKFTSS*MGPRRLPSRSGFGSVQEVVGWSCVAVAV 385
Score = 151 bits (324), Expect = 4e-035
Identities = 67/89 (75%), Positives = 70/89 (78%)
Frame = -3 / -1
Query: 1456 VNLVTALVPSETACLASSPGRTRRTEVWISREVMVGFXXXXXXXXXXXXXXXXXXLMKEF 1277
VNLVTALVPSETACLASSPGRTRRTEVWISR+VMVGF LMKEF
Sbjct: 291 VNLVTALVPSETACLASSPGRTRRTEVWISRDVMVGFLLYRASLAASAASFSKMSLMKEF 112
Query: 1276 MIDMALEEMPMSGCTCFSTLKM*IL*VST 1190
M+DMAL+EMPMSGCTCFSTLKM*IL VST
Sbjct: 111 MMDMALDEMPMSGCTCFSTLKM*ILYVST 25
Score = 90.0 bits (190), Expect(2) = 1e-024
Identities = 39/53 (73%), Positives = 44/53 (83%)
Frame = +2 / +1
Query: 1196 DLQDLHLQGAEAGAPGHWHLLQGHVDHELLH*RYLREARC*GRQARAL*QEAY 1354
D+QDLHLQGAEAGAPGH HL+QGHV HELLH R+LREA G QA A+ QEA+
Sbjct: 31 DVQDLHLQGAEAGAPGHRHLVQGHVHHELLHQRHLREAGGGGGQAGAVQQEAH 189
Score = 46.0 bits (94), Expect(2) = 1e-024
Identities = 20/28 (71%), Positives = 23/28 (82%)
Frame = +2 / +1
Query: 1400 RGARQARRLRGHQGRHQVHLGLGCAAAA 1483
R ARQARRLRGHQGRHQVH L A+++
Sbjct: 235 R*ARQARRLRGHQGRHQVHQLLDGASSS 318
>gb|CW129063.1|CW129063 104_511_11114353_148_34760_015 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11114353, DNA
sequence
Length = 698
Score = 181 bits (389), Expect = 4e-044
Identities = 80/92 (86%), Positives = 81/92 (88%)
Frame = +3 / +2
Query: 1191 VETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFXXXXXXXXXXXRYNKKPTITSRE 1370
VETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIF RYNKKPTITSRE
Sbjct: 365 VETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAAESAKLARYNKKPTITSRE 544
Query: 1371 IQTSVRLVLPGELAKHAVSEGTKAVTKFTSA* 1466
IQTSVRLVLPGELAKHAVSEGTKAVTKFTS+*
Sbjct: 545 IQTSVRLVLPGELAKHAVSEGTKAVTKFTSS* 640
Score = 154 bits (331), Expect = 4e-036
Identities = 70/90 (77%), Positives = 71/90 (78%)
Frame = -3 / -3
Query: 1459 EVNLVTALVPSETACLASSPGRTRRTEVWISREVMVGFXXXXXXXXXXXXXXXXXXLMKE 1280
EVNLVTALVPSETACLASSPGRTRRTEVWISREVMVGF LMKE
Sbjct: 633 EVNLVTALVPSETACLASSPGRTRRTEVWISREVMVGFLL*RASLADSAASFSKMSLMKE 454
Query: 1279 FMIDMALEEMPMSGCTCFSTLKM*IL*VST 1190
FM+DMALEEMPMSGCTCF TLKM*IL*VST
Sbjct: 453 FMMDMALEEMPMSGCTCFRTLKM*IL*VST 364
Score = 91.8 bits (194), Expect(2) = 4e-026
Identities = 41/53 (77%), Positives = 43/53 (81%)
Frame = +2 / +1
Query: 1196 DLQDLHLQGAEAGAPGHWHLLQGHVDHELLH*RYLREARC*GRQARAL*QEAY 1354
DLQDLHLQG EAGAPGH HLLQGHV HELLH R+LREA RQAR L QEA+
Sbjct: 370 DLQDLHLQGPEAGAPGHRHLLQGHVHHELLHQRHLREAGRGVRQARPLQQEAH 528
Score = 49.2 bits (101), Expect(2) = 4e-026
Identities = 19/20 (95%), Positives = 20/20 (100%)
Frame = +2 / +1
Query: 1400 RGARQARRLRGHQGRHQVHL 1459
RGARQARRLRG+QGRHQVHL
Sbjct: 574 RGARQARRLRGYQGRHQVHL 633
>gb|CW182557.1|CW182557 104_598_11164141_116_36663_061 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11164141, DNA
sequence
Length = 658
Score = 181 bits (389), Expect = 4e-044
Identities = 81/93 (87%), Positives = 81/93 (87%)
Frame = +3 / +3
Query: 1191 VETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFXXXXXXXXXXXRYNKKPTITSRE 1370
VETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIF RYNKKPTITSRE
Sbjct: 21 VETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAGEAAKLARYNKKPTITSRE 200
Query: 1371 IQTSVRLVLPGELAKHAVSEGTKAVTKFTSA*A 1469
IQTSVRLVLPGELAKHAVSEGTKAVTKFTS *A
Sbjct: 201 IQTSVRLVLPGELAKHAVSEGTKAVTKFTSN*A 299
Score = 155 bits (333), Expect = 2e-036
Identities = 70/89 (78%), Positives = 71/89 (79%)
Frame = -3 / -1
Query: 1456 VNLVTALVPSETACLASSPGRTRRTEVWISREVMVGFXXXXXXXXXXXXXXXXXXLMKEF 1277
VNLVTALVPSETACLASSPGRTRRTEVWISREVMVGF LMKEF
Sbjct: 286 VNLVTALVPSETACLASSPGRTRRTEVWISREVMVGFLLYRASLAASPASFSKMSLMKEF 107
Query: 1276 MIDMALEEMPMSGCTCFSTLKM*IL*VST 1190
M+DMALEEMPMSGCTCFSTLKM*IL*VST
Sbjct: 106 MMDMALEEMPMSGCTCFSTLKM*IL*VST 20
Score = 92.3 bits (195), Expect(2) = 2e-024
Identities = 41/53 (77%), Positives = 45/53 (84%)
Frame = +2 / +2
Query: 1196 DLQDLHLQGAEAGAPGHWHLLQGHVDHELLH*RYLREARC*GRQARAL*QEAY 1354
DLQ+LHLQGAEAGAP H HLLQGHV HELLH +LREAR GRQARA+ QEA+
Sbjct: 26 DLQNLHLQGAEAGAPRHRHLLQGHVHHELLHQ*HLREARRRGRQARAVQQEAH 184
Score = 43.2 bits (88), Expect(2) = 2e-024
Identities = 17/19 (89%), Positives = 18/19 (94%)
Frame = +2 / +2
Query: 1400 RGARQARRLRGHQGRHQVH 1456
R ARQARRLRG+QGRHQVH
Sbjct: 230 RRARQARRLRGNQGRHQVH 286
>gb|CW297850.1|CW297850 104_780_11462260_116_35647_012 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11462260, DNA
sequence
Length = 662
Score = 181 bits (389), Expect = 4e-044
Identities = 80/92 (86%), Positives = 81/92 (88%)
Frame = +3 / +2
Query: 1191 VETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFXXXXXXXXXXXRYNKKPTITSRE 1370
VETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIF RYNKKPTITSRE
Sbjct: 92 VETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAAESAKLARYNKKPTITSRE 271
Query: 1371 IQTSVRLVLPGELAKHAVSEGTKAVTKFTSA* 1466
IQTSVRLVLPGELAKHAVSEGTKAVTKFTS+*
Sbjct: 272 IQTSVRLVLPGELAKHAVSEGTKAVTKFTSS* 367
Score = 154 bits (331), Expect = 4e-036
Identities = 70/90 (77%), Positives = 71/90 (78%)
Frame = -3 / -3
Query: 1459 EVNLVTALVPSETACLASSPGRTRRTEVWISREVMVGFXXXXXXXXXXXXXXXXXXLMKE 1280
EVNLVTALVPSETACLASSPGRTRRTEVWISREVMVGF LMKE
Sbjct: 360 EVNLVTALVPSETACLASSPGRTRRTEVWISREVMVGFLL*RASLADSAASFSKMSLMKE 181
Query: 1279 FMIDMALEEMPMSGCTCFSTLKM*IL*VST 1190
FM+DMALEEMPMSGCTCF TLKM*IL*VST
Sbjct: 180 FMMDMALEEMPMSGCTCFRTLKM*IL*VST 91
Score = 91.8 bits (194), Expect(2) = 4e-026
Identities = 41/53 (77%), Positives = 43/53 (81%)
Frame = +2 / +1
Query: 1196 DLQDLHLQGAEAGAPGHWHLLQGHVDHELLH*RYLREARC*GRQARAL*QEAY 1354
DLQDLHLQG EAGAPGH HLLQGHV HELLH R+LREA RQAR L QEA+
Sbjct: 97 DLQDLHLQGPEAGAPGHRHLLQGHVHHELLHQRHLREAGRGVRQARPLQQEAH 255
Score = 49.2 bits (101), Expect(2) = 4e-026
Identities = 19/20 (95%), Positives = 20/20 (100%)
Frame = +2 / +1
Query: 1400 RGARQARRLRGHQGRHQVHL 1459
RGARQARRLRG+QGRHQVHL
Sbjct: 301 RGARQARRLRGYQGRHQVHL 360
>gb|CW317075.1|CW317075 104_808_11473223_116_35851_084 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11473223, DNA
sequence
Length = 600
Score = 181 bits (389), Expect = 4e-044
Identities = 80/92 (86%), Positives = 81/92 (88%)
Frame = +3 / -1
Query: 1191 VETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFXXXXXXXXXXXRYNKKPTITSRE 1370
VETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIF RYNKKPTITSRE
Sbjct: 591 VETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAAESAKLARYNKKPTITSRE 412
Query: 1371 IQTSVRLVLPGELAKHAVSEGTKAVTKFTSA* 1466
IQTSVRLVLPGELAKHAVSEGTKAVTKFTS+*
Sbjct: 411 IQTSVRLVLPGELAKHAVSEGTKAVTKFTSS* 316
Score = 152 bits (327), Expect = 1e-035
Identities = 69/90 (76%), Positives = 71/90 (78%)
Frame = -3 / +2
Query: 1459 EVNLVTALVPSETACLASSPGRTRRTEVWISREVMVGFXXXXXXXXXXXXXXXXXXLMKE 1280
EVNLVTALVPSETACLASSPGRTRRTEVWISREVMVGF LMKE
Sbjct: 323 EVNLVTALVPSETACLASSPGRTRRTEVWISREVMVGFLL*RASLADSAASFSKMSLMKE 502
Query: 1279 FMIDMALEEMPMSGCTCFSTLKM*IL*VST 1190
FM+DMAL+EMPMSGCTC STLKM*IL*VST
Sbjct: 503 FMMDMALDEMPMSGCTCLSTLKM*IL*VST 592
Score = 90.0 bits (190), Expect(2) = 3e-025
Identities = 40/53 (75%), Positives = 44/53 (83%)
Frame = +2 / -3
Query: 1196 DLQDLHLQGAEAGAPGHWHLLQGHVDHELLH*RYLREARC*GRQARAL*QEAY 1354
DLQDLHLQGA+AGAPGH HL+QGHV HELLH R+LREA RQA AL QEA+
Sbjct: 586 DLQDLHLQGAQAGAPGHRHLVQGHVHHELLHQRHLREACGRVRQAGALQQEAH 428
Score = 47.8 bits (98), Expect(2) = 3e-025
Identities = 20/23 (86%), Positives = 20/23 (86%)
Frame = +2 / -3
Query: 1400 RGARQARRLRGHQGRHQVHLGLG 1468
R ARQARRLRGHQG HQVHL LG
Sbjct: 382 RRARQARRLRGHQGCHQVHLFLG 314
>gb|CW319235.1|CW319235 104_811_11474377_148_35884_003 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11474377, DNA
sequence
Length = 704
Score = 181 bits (389), Expect = 4e-044
Identities = 80/92 (86%), Positives = 81/92 (88%)
Frame = +3 / +1
Query: 1191 VETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFXXXXXXXXXXXRYNKKPTITSRE 1370
VETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIF RYNKKPTITSRE
Sbjct: 331 VETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAAESAKLARYNKKPTITSRE 510
Query: 1371 IQTSVRLVLPGELAKHAVSEGTKAVTKFTSA* 1466
IQTSVRLVLPGELAKHAVSEGTKAVTKFTS+*
Sbjct: 511 IQTSVRLVLPGELAKHAVSEGTKAVTKFTSS* 606
Score = 152 bits (327), Expect = 1e-035
Identities = 69/90 (76%), Positives = 71/90 (78%)
Frame = -3 / -1
Query: 1459 EVNLVTALVPSETACLASSPGRTRRTEVWISREVMVGFXXXXXXXXXXXXXXXXXXLMKE 1280
EVNLVTALVPSETACLASSPGRTRRTEVWISREVMVGF LMKE
Sbjct: 599 EVNLVTALVPSETACLASSPGRTRRTEVWISREVMVGFLL*RASLADSAASFSKMSLMKE 420
Query: 1279 FMIDMALEEMPMSGCTCFSTLKM*IL*VST 1190
FM+DMAL+EMPMSGCTC STLKM*IL*VST
Sbjct: 419 FMMDMALDEMPMSGCTCLSTLKM*IL*VST 330
Score = 90.0 bits (190), Expect(2) = 3e-025
Identities = 40/53 (75%), Positives = 44/53 (83%)
Frame = +2 / +3
Query: 1196 DLQDLHLQGAEAGAPGHWHLLQGHVDHELLH*RYLREARC*GRQARAL*QEAY 1354
DLQDLHLQGA+AGAPGH HL+QGHV HELLH R+LREA RQA AL QEA+
Sbjct: 336 DLQDLHLQGAQAGAPGHRHLVQGHVHHELLHQRHLREACGRVRQAGALQQEAH 494
Score = 47.8 bits (98), Expect(2) = 3e-025
Identities = 20/23 (86%), Positives = 20/23 (86%)
Frame = +2 / +3
Query: 1400 RGARQARRLRGHQGRHQVHLGLG 1468
R ARQARRLRGHQG HQVHL LG
Sbjct: 540 RRARQARRLRGHQGCHQVHLFLG 608
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,427,067,238
Number of Sequences: 832831
Number of extensions: 17598785
Number of successful extensions: 189628
Number of sequences better than 1.0e-020: 149
length of database: 163,786,556
effective HSP length: 57
effective length of database: 116,315,189
effective search space used: 64322299517
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)