TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 131537.2.134
(674 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CD432572.1|CD432572 ETH1_30_E04.g1_A002 Ethylene-treated... 196 8e-057
gb|CX607748.1|CX607748 ANR1_30_B07.g1_A002 Anaerobic roots ... 193 2e-055
gb|CX607662.1|CX607662 ANR1_30_B07.b1_A002 Anaerobic roots ... 195 1e-053
gb|BE357369.1|BE357369 DG1_148_A05.g1_A002 Dark Grown 1 (DG... 196 5e-053
gb|AI724242.1|AI724242 RHIZ1_8_B12.y2_A001 Rhizome1 (RHIZ1)... 192 1e-052
gb|CF772707.1|CF772707 DSBF1_38_D05.g1_A010 Drought-stresse... 175 9e-049
gb|BZ341857.1|BZ341857 ic79b05.g1 WGS-SbicolorF (JM107 adap... 186 4e-046
gb|CL152064.1|CL152064 104_335_10779694_116_31364_094 Sorgh... 186 4e-046
gb|CW155043.1|CW155043 104_557_11145924_116_36362_042 Sorgh... 186 4e-046
gb|CW155044.1|CW155044 104_557_11145924_148_36361_042 Sorgh... 186 4e-046
gb|BF480763.1|BF480763 FM1_14_F11.g1_A003 Floral-Induced Me... 186 4e-046
gb|CD462726.1|CD462726 ETH1_39_B03.g1_A002 Ethylene-treated... 186 4e-046
gb|CX606979.1|CX606979 ANR1_6_B05.b1_A002 Anaerobic roots S... 186 4e-046
gb|CX607063.1|CX607063 ANR1_6_B05.g1_A002 Anaerobic roots S... 186 4e-046
gb|CX610420.1|CX610420 ANR1_18_D02.g1_A002 Anaerobic roots ... 186 4e-046
gb|CW128767.1|CW128767 104_510_11114194_148_34755_039 Sorgh... 184 9e-046
gb|AI723845.1|AI723845 RHIZ1_28_B06.y1_A001 Rhizome1 (RHIZ1... 184 9e-046
gb|BG240440.1|BG240440 OV1_30_A12.b1_A002 Ovary 1 (OV1) Sor... 184 9e-046
gb|BG488106.1|BG488106 RHIZ2_63_D10.g1_A003 Rhizome2 (RHIZ2... 184 9e-046
gb|BG488416.1|BG488416 RHIZ2_63_D10.b1_A003 Rhizome2 (RHIZ2... 184 9e-046
gb|CW129063.1|CW129063 104_511_11114353_148_34760_015 Sorgh... 184 1e-045
gb|CW188377.1|CW188377 104_608_11172997_148_36734_061 Sorgh... 184 1e-045
gb|CW297850.1|CW297850 104_780_11462260_116_35647_012 Sorgh... 184 1e-045
gb|CW306661.1|CW306661 104_792_11466961_148_35713_007 Sorgh... 184 1e-045
gb|CW317075.1|CW317075 104_808_11473223_116_35851_084 Sorgh... 184 1e-045
gb|CW319235.1|CW319235 104_811_11474377_148_35884_003 Sorgh... 184 1e-045
gb|CW361905.1|CW361905 fsbb001f030l13f0 Sorghum methylation... 184 1e-045
gb|CW410848.1|CW410848 fsbb001f105m09k0 Sorghum methylation... 184 1e-045
gb|CW417908.1|CW417908 fsbb001f121c05f0 Sorghum methylation... 184 1e-045
gb|AW680031.1|AW680031 WS1_34_A02.g1_A002 Water-stressed 1 ... 184 1e-045
gb|BE355360.1|BE355360 DG1_114_A03.b1_A002 Dark Grown 1 (DG... 184 1e-045
gb|BE355526.1|BE355526 DG1_114_A03.g1_A002 Dark Grown 1 (DG... 184 1e-045
gb|BE917707.1|BE917707 OV1_6_B04.b1_A002 Ovary 1 (OV1) Sorg... 184 1e-045
gb|BG052252.1|BG052252 RHIZ2_12_B05.g1_A003 Rhizome2 (RHIZ2... 184 1e-045
gb|BG102543.1|BG102543 RHIZ2_34_D04.g1_A003 Rhizome2 (RHIZ2... 184 1e-045
gb|BG410872.1|BG410872 EM1_27_A01.g1_A002 Embryo 1 (EM1) So... 184 1e-045
gb|CF071535.1|CF071535 FE1_17_C03.b1_A002 Iron-deficient se... 184 1e-045
gb|CW191309.1|CW191309 104_613_11178426_116_36942_075 Sorgh... 183 2e-045
gb|AI724175.1|AI724175 RHIZ1_8_A04.y2_A001 Rhizome1 (RHIZ1)... 183 2e-045
gb|BE592378.1|BE592378 WS1_94_A05.g1_A002 Water-stressed 1 ... 183 2e-045
gb|CW182557.1|CW182557 104_598_11164141_116_36663_061 Sorgh... 182 3e-045
gb|AW564395.1|AW564395 LG1_292_F12.b1_A002 Light Grown 1 (L... 182 3e-045
gb|BE593143.1|BE593143 WS1_98_A10.g1_A002 Water-stressed 1 ... 182 3e-045
gb|BF481909.1|BF481909 FM1_22_H04.g1_A003 Floral-Induced Me... 182 3e-045
gb|BF656458.1|BF656458 FM1_50_B08.g1_A003 Floral-Induced Me... 182 3e-045
gb|BF704683.1|BF704683 FM1_50_B08.b1_A003 Floral-Induced Me... 182 3e-045
gb|CD213618.1|CD213618 HS1_52_G12.b1_A012 Heat-shocked seed... 182 3e-045
gb|CD213713.1|CD213713 HS1_52_G12.g1_A012 Heat-shocked seed... 182 3e-045
gb|CD431873.1|CD431873 ETH1_11_A02.g1_A002 Ethylene-treated... 182 3e-045
gb|CN150853.1|CN150853 WOUND1_71_G11.g1_A002 Wounded leaves... 182 3e-045
gb|CF072752.1|CF072752 FE1_25_E07.g1_A002 Iron-deficient se... 182 5e-045
gb|CW183462.1|CW183462 104_599_11164629_148_36672_089 Sorgh... 181 9e-045
gb|BE599367.1|BE599367 PI1_88_F07.g1_A002 Pathogen induced ... 181 9e-045
gb|CD464058.1|CD464058 ETH1_48_H05.b1_A002 Ethylene-treated... 181 9e-045
gb|CW105327.1|CW105327 104_474_11012845_116_34450_053 Sorgh... 181 1e-044
gb|BG049237.1|BG049237 OV1_17_D01.g1_A002 Ovary 1 (OV1) Sor... 181 1e-044
gb|CF071274.1|CF071274 FE1_16_D02.g1_A002 Iron-deficient se... 181 1e-044
gb|CW394994.1|CW394994 fsbb001f082n15f0 Sorghum methylation... 180 2e-044
gb|CX608442.1|CX608442 ANR1_38_D08.g1_A002 Anaerobic roots ... 180 2e-044
gb|CW112587.1|CW112587 104_486_11104970_116_34548_007 Sorgh... 180 2e-044
gb|CN125957.1|CN125957 RHOH1_14_H01.b1_A002 Acid- and alkal... 179 3e-044
gb|CN126047.1|CN126047 RHOH1_14_H01.g1_A002 Acid- and alkal... 179 3e-044
gb|CW410847.1|CW410847 fsbb001f105m09f0 Sorghum methylation... 174 1e-042
gb|CF431776.1|CF431776 NIT1_9_B03.b1_A002 Nitrogen-deficien... 174 1e-042
gb|AI724884.1|AI724884 RHIZ1_30_G03.y3_A001 Rhizome1 (RHIZ1... 153 2e-042
gb|CF074009.1|CF074009 FE1_9_D12.g1_A002 Iron-deficient see... 170 2e-041
gb|BE917630.1|BE917630 OV1_6_B04.g1_A002 Ovary 1 (OV1) Sorg... 160 5e-040
gb|BG049096.1|BG049096 OV1_23_C04.g1_A002 Ovary 1 (OV1) Sor... 165 8e-040
gb|CW088567.1|CW088567 104_433_10948227_116_32575_006 Sorgh... 148 3e-039
gb|BF480894.1|BF480894 FM1_14_F11.b1_A003 Floral-Induced Me... 162 5e-039
gb|CF484983.1|CF484983 POL1_28_F02.g1_A002 Pollen Sorghum b... 160 2e-038
gb|BG411209.1|BG411209 EM1_27_A01.b1_A002 Embryo 1 (EM1) So... 159 4e-038
gb|BE593453.1|BE593453 WS1_98_A10.b1_A002 Water-stressed 1 ... 159 5e-038
gb|AW286565.1|AW286565 LG1_334_E01.g1_A002 Light Grown 1 (L... 158 7e-038
gb|AW745446.1|AW745446 WS1_34_A02.b1_A002 Water-stressed 1 ... 157 2e-037
gb|BE599532.1|BE599532 PI1_88_F07.b1_A002 Pathogen induced ... 154 1e-036
gb|CD431130.1|CD431130 ETH1_7_B09.b1_A002 Ethylene-treated ... 152 4e-036
gb|CD431263.1|CD431263 ETH1_7_B09.g1_A002 Ethylene-treated ... 152 4e-036
gb|CF431835.1|CF431835 NIT1_9_B03.g1_A002 Nitrogen-deficien... 146 3e-034
gb|CN150769.1|CN150769 WOUND1_71_G11.b1_A002 Wounded leaves... 146 3e-034
gb|CW432220.1|CW432220 fsbb001f146m24f0 Sorghum methylation... 138 1e-033
gb|CW463246.1|CW463246 fsbb001f211m02f0 Sorghum methylation... 137 2e-031
gb|BE592516.1|BE592516 WS1_94_A05.b1_A002 Water-stressed 1 ... 131 9e-030
gb|CW191310.1|CW191310 104_613_11178426_148_36941_075 Sorgh... 130 2e-029
gb|BE355445.1|BE355445 DG1_114_A03.b2_A002 Dark Grown 1 (DG... 130 2e-029
gb|BF482021.1|BF482021 FM1_22_H04.b1_A003 Floral-Induced Me... 127 1e-028
gb|CW182558.1|CW182558 104_598_11164141_148_36664_061 Sorgh... 125 8e-028
gb|CW306660.1|CW306660 104_792_11466961_116_35709_007 Sorgh... 124 1e-027
gb|CW088569.1|CW088569 104_433_10948227_251_32621_006 Sorgh... 115 2e-027
gb|CF434162.1|CF434162 NIT1_32_H03.g1_A002 Nitrogen-deficie... 122 7e-027
gb|CW105328.1|CW105328 104_474_11012845_148_34446_053 Sorgh... 120 2e-026
gb|CW394995.1|CW394995 fsbb001f082n15k0 Sorghum methylation... 120 2e-026
gb|CL170389.1|CL170389 104_371_10813777_116_31791_097 Sorgh... 109 4e-023
gb|CL186013.1|CL186013 104_400_10899928_116_32405_056 Sorgh... 109 4e-023
gb|CW252274.1|CW252274 104_715_11224407_116_35096_060 Sorgh... 109 4e-023
gb|CW278768.1|CW278768 104_753_11406722_116_35426_009 Sorgh... 109 4e-023
gb|CW233439.1|CW233439 104_686_11213422_116_37376_085 Sorgh... 104 1e-021
>gb|CD432572.1|CD432572 ETH1_30_E04.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_30_E04_A002 5', mRNA sequence
Length = 667
Score = 196 bits (423), Expect(3) = 8e-057
Identities = 90/105 (85%), Positives = 90/105 (85%)
Frame = -2 / +1
Query: 439 SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFXXXXXXXXXXARYNKKPTITSR 260
SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIF ARYNKKPTITSR
Sbjct: 235 SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAAEAAKLARYNKKPTITSR 414
Query: 259 EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS*GAAARCYDPV*F 125
EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS* AAA CY V F
Sbjct: 415 EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS*AAAAWCYGLVSF 549
Score = 150 bits (323), Expect(3) = 2e-046
Identities = 69/102 (67%), Positives = 74/102 (72%)
Frame = +3 / -3
Query: 126 N*TGS*QRAAAP*EDVNLVTALVPSDTACLASSPGRTRRTEVWISREVMVGXXXXXXXXX 305
N T * AAA *E+VNLVTALVPS+TACLASSPGRTRRT+VWISREVMVG
Sbjct: 548 NETRP*HHAAAA*EEVNLVTALVPSETACLASSPGRTRRTDVWISREVMVGFLL*RASLA 369
Query: 306 XXXXXXXXXXXXXEFMMDMALDEMPMSGCTCLSTLKM*ILYV 431
EFMMDMAL+E+PMSGCTCLSTLKM*ILYV
Sbjct: 368 ASAASFSKMSLMKEFMMDMALEEIPMSGCTCLSTLKM*ILYV 243
Score = 68.9 bits (144), Expect(5) = 4e-026
Identities = 28/39 (71%), Positives = 31/39 (79%)
Frame = +2 / -2
Query: 131 NRIVATCGGTLRGCKLGNRLGPFGYGVLGELAGEDEAHR 247
N+ VA C G+LRG KLGN LG G GVLGELAG+DEAHR
Sbjct: 543 NKTVAPCSGSLRGSKLGNSLGALGDGVLGELAGKDEAHR 427
Score = 63.8 bits (133), Expect(4) = 9e-023
Identities = 23/25 (92%), Positives = 25/25 (100%)
Frame = -1 / +3
Query: 431 DVQDLHLQGAQAGAPGHWHLVQGHV 357
DVQDLHLQGAQAGAPGHW+L+QGHV
Sbjct: 243 DVQDLHLQGAQAGAPGHWYLLQGHV 317
Score = 43.2 bits (88), Expect(3) = 2e-046
Identities = 18/27 (66%), Positives = 20/27 (74%)
Frame = +1 / -3
Query: 61 HSAIITNSTLLHEQPSTGLNMRIKQDR 141
HSA TNSTL HE+PSTGLN R + R
Sbjct: 617 HSADTTNSTLFHERPSTGLNTRGNETR 537
Score = 40.9 bits (83), Expect(4) = 9e-023
Identities = 16/24 (66%), Positives = 19/24 (79%)
Frame = -3 / +2
Query: 201 PKGPRRLPSLHPLRVPPHVATILF 130
P+ PR LPSL PLR+P H AT+LF
Sbjct: 473 PRAPRLLPSLLPLRLPLHGATVLF 544
Score = 39.1 bits (79), Expect(5) = 4e-026
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = +2 / -2
Query: 374 DANVRVHLLEHLEDVD 421
D NVRVHLLEHLEDVD
Sbjct: 300 DTNVRVHLLEHLEDVD 253
Score = 36.8 bits (74), Expect(5) = 4e-026
Identities = 14/21 (66%), Positives = 16/21 (76%)
Frame = +3 / -2
Query: 60 SFSNYNKFYIVARTT*HRPKY 122
SFS YNKFY V+R T H PK+
Sbjct: 618 SFSRYNKFYTVSRATQHWPKH 556
Score = 34.5 bits (69), Expect(3) = 8e-057
Identities = 15/21 (71%), Positives = 18/21 (85%)
Frame = -1 / +1
Query: 122 IFRPVLGCSCNNVEFVIIAE* 60
+FRPVLG S N+VEFV+ AE*
Sbjct: 556 VFRPVLGRS*NSVEFVVSAE* 618
Score = 33.6 bits (67), Expect(3) = 2e-046
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = +3 / -1
Query: 597 RKRWGKGRLGNLLVSGGECS 656
R R GK R+ NLLV GG+CS
Sbjct: 76 RTRGGKRRIANLLVGGGKCS 17
Score = 31.8 bits (63), Expect(3) = 8e-057
Identities = 14/23 (60%), Positives = 18/23 (78%)
Frame = -3 / +1
Query: 663 KATNTRRHSPANSQAAPSPISFA 595
KAT+T R PANSQ+A S ++FA
Sbjct: 10 KATSTCRLPPANSQSAASHLAFA 78
Score = 31.3 bits (62), Expect(4) = 9e-023
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = -2 / +3
Query: 664 ESYEHSPPLTSKFPSRPFP 608
+S+EH PP TSKF R FP
Sbjct: 9 KSHEHLPPPTSKFAIRRFP 65
Score = 28.6 bits (56), Expect(4) = 9e-023
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = -3 / +3
Query: 129 NSHI*ACARLFVQQCRICYNC*M 61
+S +*A A V+QCRIC C*M
Sbjct: 549 SSCV*ASAGSLVKQCRICCIC*M 617
Score = 24.0 bits (46), Expect(5) = 4e-026
Identities = 6/6 (100%), Positives = 6/6 (100%)
Frame = +1 / -1
Query: 352 *WTWPW 369
*WTWPW
Sbjct: 322 *WTWPW 305
Score = 23.5 bits (45), Expect(5) = 4e-026
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = +2 / -3
Query: 611 EGAAWEFAGEWRRVFVAF 664
E A EFAG R+V VAF
Sbjct: 62 EAADCEFAGGRRQVLVAF 9
>gb|CX607748.1|CX607748 ANR1_30_B07.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_30_B07_A002 5', mRNA sequence
Length = 644
Score = 193 bits (417), Expect(3) = 2e-055
Identities = 87/100 (87%), Positives = 88/100 (88%)
Frame = -2 / +3
Query: 439 SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFXXXXXXXXXXARYNKKPTITSR 260
SVETYKIYIFKVLKQVHPDIGISS+AMSIMNSFINDIF ARYNKKPTITSR
Sbjct: 231 SVETYKIYIFKVLKQVHPDIGISSEAMSIMNSFINDIFEKLAAEAAKLARYNKKPTITSR 410
Query: 259 EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS*GAAARCY 140
EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS* AAA CY
Sbjct: 411 EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS*AAAAWCY 530
Score = 147 bits (315), Expect(3) = 4e-045
Identities = 67/100 (67%), Positives = 72/100 (72%)
Frame = +3 / -2
Query: 132 TGS*QRAAAP*EDVNLVTALVPSDTACLASSPGRTRRTEVWISREVMVGXXXXXXXXXXX 311
T * AAA *E+VNLVTALVPS+TACLASSPGRTRRT+VWISREVMVG
Sbjct: 538 TRP*HHAAAA*EEVNLVTALVPSETACLASSPGRTRRTDVWISREVMVGFLL*RASLAAS 359
Query: 312 XXXXXXXXXXXEFMMDMALDEMPMSGCTCLSTLKM*ILYV 431
EFMMDMA +E+PMSGCTCLSTLKM*ILYV
Sbjct: 358 AASFSKMSLMKEFMMDMASEEIPMSGCTCLSTLKM*ILYV 239
Score = 68.9 bits (144), Expect(4) = 2e-023
Identities = 28/39 (71%), Positives = 31/39 (79%)
Frame = +2 / -1
Query: 131 NRIVATCGGTLRGCKLGNRLGPFGYGVLGELAGEDEAHR 247
N+ VA C G+LRG KLGN LG G GVLGELAG+DEAHR
Sbjct: 539 NKTVAPCSGSLRGSKLGNSLGALGDGVLGELAGKDEAHR 423
Score = 42.8 bits (87), Expect(3) = 4e-045
Identities = 18/27 (66%), Positives = 20/27 (74%)
Frame = +1 / -2
Query: 61 HSAIITNSTLLHEQPSTGLNMRIKQDR 141
HSA TNSTL HE+PSTGLN R + R
Sbjct: 613 HSADTTNSTLFHERPSTGLNTRGDETR 533
Score = 39.1 bits (79), Expect(4) = 2e-023
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = +2 / -1
Query: 374 DANVRVHLLEHLEDVD 421
D NVRVHLLEHLEDVD
Sbjct: 296 DTNVRVHLLEHLEDVD 249
Score = 36.8 bits (74), Expect(4) = 2e-023
Identities = 14/21 (66%), Positives = 16/21 (76%)
Frame = +3 / -1
Query: 60 SFSNYNKFYIVARTT*HRPKY 122
SFS YNKFY V+R T H PK+
Sbjct: 614 SFSRYNKFYTVSRATQHWPKH 552
Score = 34.5 bits (69), Expect(3) = 2e-055
Identities = 15/21 (71%), Positives = 18/21 (85%)
Frame = -1 / +3
Query: 122 IFRPVLGCSCNNVEFVIIAE* 60
+FRPVLG S N+VEFV+ AE*
Sbjct: 552 VFRPVLGRS*NSVEFVVSAE* 614
Score = 33.6 bits (67), Expect(3) = 4e-045
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = +3 / -3
Query: 597 RKRWGKGRLGNLLVSGGECS 656
R R GK R+ NLLV GG+CS
Sbjct: 72 RTRGGKRRIANLLVGGGKCS 13
Score = 29.9 bits (59), Expect(3) = 2e-055
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = -2 / +2
Query: 664 ESYEHSPPLTSKFPSRPFP 608
+ +EH PP TSKF R FP
Sbjct: 5 QKHEHLPPPTSKFAIRRFP 61
Score = 22.1 bits (42), Expect(4) = 2e-023
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +1 / -1
Query: 628 ICW*VAASVRSF 663
ICW AAS R+F
Sbjct: 41 ICWWEAASARAF 6
>gb|CX607662.1|CX607662 ANR1_30_B07.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_30_B07_A002 3', mRNA sequence
Length = 607
Score = 195 bits (421), Expect(2) = 1e-053
Identities = 88/100 (88%), Positives = 88/100 (88%)
Frame = -2 / +2
Query: 439 SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFXXXXXXXXXXARYNKKPTITSR 260
SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIF ARYNKKPTITSR
Sbjct: 161 SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAAEAAKLARYNKKPTITSR 340
Query: 259 EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS*GAAARCY 140
EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS* AAA CY
Sbjct: 341 EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS*AAAAWCY 460
Score = 149 bits (321), Expect(2) = 4e-042
Identities = 68/100 (68%), Positives = 73/100 (73%)
Frame = +3 / -2
Query: 132 TGS*QRAAAP*EDVNLVTALVPSDTACLASSPGRTRRTEVWISREVMVGXXXXXXXXXXX 311
T * AAA *E+VNLVTALVPS+TACLASSPGRTRRT+VWISREVMVG
Sbjct: 468 TRP*HHAAAA*EEVNLVTALVPSETACLASSPGRTRRTDVWISREVMVGFLL*RASLAAS 289
Query: 312 XXXXXXXXXXXEFMMDMALDEMPMSGCTCLSTLKM*ILYV 431
EFMMDMAL+E+PMSGCTCLSTLKM*ILYV
Sbjct: 288 AASFSKMSLMKEFMMDMALEEIPMSGCTCLSTLKM*ILYV 169
Score = 69.3 bits (145), Expect(4) = 1e-022
Identities = 28/39 (71%), Positives = 31/39 (79%)
Frame = +2 / -1
Query: 131 NRIVATCGGTLRGCKLGNRLGPFGYGVLGELAGEDEAHR 247
N+ VA C G+LRG KLGN LG G GVLGELAG+DEAHR
Sbjct: 469 NKTVAPCSGSLRGSKLGNSLGALGNGVLGELAGKDEAHR 353
Score = 42.8 bits (87), Expect(2) = 4e-042
Identities = 18/27 (66%), Positives = 20/27 (74%)
Frame = +1 / -2
Query: 61 HSAIITNSTLLHEQPSTGLNMRIKQDR 141
HSA TNSTL HE+PSTGLN R + R
Sbjct: 543 HSANTTNSTLFHERPSTGLNTRGDETR 463
Score = 36.8 bits (74), Expect(4) = 1e-022
Identities = 14/21 (66%), Positives = 16/21 (76%)
Frame = +3 / -1
Query: 60 SFSNYNKFYIVARTT*HRPKY 122
SFS YNKFY V+R T H PK+
Sbjct: 544 SFSKYNKFYTVSRATQHWPKH 482
Score = 35.4 bits (71), Expect(2) = 1e-053
Identities = 15/21 (71%), Positives = 18/21 (85%)
Frame = -1 / +2
Query: 122 IFRPVLGCSCNNVEFVIIAE* 60
+FRPVLG S N+VEFV+ AE*
Sbjct: 482 VFRPVLGRS*NSVEFVVFAE* 544
Score = 32.2 bits (64), Expect(4) = 1e-022
Identities = 12/16 (75%), Positives = 15/16 (93%)
Frame = +2 / -1
Query: 374 DANVRVHLLEHLEDVD 421
+ NVRVHLLEHLE+V+
Sbjct: 226 NTNVRVHLLEHLENVN 179
Score = 24.0 bits (46), Expect(4) = 1e-022
Identities = 6/6 (100%), Positives = 6/6 (100%)
Frame = +1 / -3
Query: 352 *WTWPW 369
*WTWPW
Sbjct: 248 *WTWPW 231
>gb|BE357369.1|BE357369 DG1_148_A05.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 616
Score = 196 bits (422), Expect(3) = 5e-053
Identities = 90/105 (85%), Positives = 90/105 (85%)
Frame = -2 / +2
Query: 439 SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFXXXXXXXXXXARYNKKPTITSR 260
SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIF ARYNKKPTITSR
Sbjct: 224 SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAAEAAKLARYNKKPTITSR 403
Query: 259 EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS*GAAARCYDPV*F 125
EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS* AAA CY V F
Sbjct: 404 EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS*AAAAWCYGFVSF 538
Score = 150 bits (323), Expect(3) = 8e-044
Identities = 69/102 (67%), Positives = 74/102 (72%)
Frame = +3 / -2
Query: 126 N*TGS*QRAAAP*EDVNLVTALVPSDTACLASSPGRTRRTEVWISREVMVGXXXXXXXXX 305
N T * AAA *E+VNLVTALVPS+TACLASSPGRTRRT+VWISREVMVG
Sbjct: 537 NETKP*HHAAAA*EEVNLVTALVPSETACLASSPGRTRRTDVWISREVMVGFLL*RASLA 358
Query: 306 XXXXXXXXXXXXXEFMMDMALDEMPMSGCTCLSTLKM*ILYV 431
EFMMDMAL+E+PMSGCTCLSTLKM*ILYV
Sbjct: 357 ASAASFSKMSLMKEFMMDMALEEIPMSGCTCLSTLKM*ILYV 232
Score = 68.9 bits (144), Expect(4) = 6e-022
Identities = 28/39 (71%), Positives = 31/39 (79%)
Frame = +2 / -1
Query: 131 NRIVATCGGTLRGCKLGNRLGPFGYGVLGELAGEDEAHR 247
N+ VA C G+LRG KLGN LG G GVLGELAG+DEAHR
Sbjct: 532 NKTVAPCSGSLRGSKLGNSLGALGDGVLGELAGKDEAHR 416
Score = 39.1 bits (79), Expect(4) = 6e-022
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = +2 / -1
Query: 374 DANVRVHLLEHLEDVD 421
D NVRVHLLEHLEDVD
Sbjct: 289 DTNVRVHLLEHLEDVD 242
Score = 36.3 bits (73), Expect(3) = 8e-044
Identities = 15/28 (53%), Positives = 20/28 (71%)
Frame = +1 / -1
Query: 61 HSAIITNSTLLHEQPSTGLNMRIKQDRS 144
HSA TNSTL HE+PSTG K++++
Sbjct: 607 HSAETTNSTLFHERPSTGPKHTRKRNKT 524
Score = 31.8 bits (63), Expect(3) = 8e-044
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +3 / -3
Query: 597 RKRWGKGRLGNLLVSGGEC 653
R R GK R+ NLLV GG+C
Sbjct: 65 RTRGGKRRIANLLVGGGKC 9
Score = 28.1 bits (55), Expect(3) = 5e-053
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = -1 / +3
Query: 113 PVLGCSCNNVEFVIIAE* 60
PVLG S N+VEFV+ AE*
Sbjct: 555 PVLGRS*NSVEFVVSAE* 608
Score = 27.6 bits (54), Expect(4) = 6e-022
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +3 / -3
Query: 60 SFSNYNKFYIVARTT*H 110
SFS NKFY V+R T H
Sbjct: 608 SFSRNNKFYTVSRATQH 558
Score = 25.8 bits (50), Expect(3) = 5e-053
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -2 / +1
Query: 652 HSPPLTSKFPSRPFP 608
H PP TSKF R FP
Sbjct: 10 HLPPPTSKFAIRRFP 54
Score = 24.0 bits (46), Expect(4) = 6e-022
Identities = 6/6 (100%), Positives = 6/6 (100%)
Frame = +1 / -3
Query: 352 *WTWPW 369
*WTWPW
Sbjct: 311 *WTWPW 294
>gb|AI724242.1|AI724242 RHIZ1_8_B12.y2_A001 Rhizome1 (RHIZ1) Sorghum halepense cDNA, mRNA
sequence
Length = 448
Score = 192 bits (414), Expect(2) = 1e-052
Identities = 89/105 (84%), Positives = 89/105 (84%)
Frame = -2 / +2
Query: 439 SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFXXXXXXXXXXARYNKKPTITSR 260
SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIF ARYNKKPTITSR
Sbjct: 17 SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAAEAAKLARYNKKPTITSR 196
Query: 259 EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS*GAAARCYDPV*F 125
EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS* AA R Y V F
Sbjct: 197 EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS*VAAVRFYGHVSF 331
Score = 152 bits (326), Expect(2) = 9e-043
Identities = 70/102 (68%), Positives = 74/102 (72%)
Frame = +3 / -2
Query: 126 N*TGS*QRAAAP*EDVNLVTALVPSDTACLASSPGRTRRTEVWISREVMVGXXXXXXXXX 305
N T * R AA *++VNLVTALVPS+TACLASSPGRTRRTEVWISREVMVG
Sbjct: 330 NET*P*NRTAAT*DEVNLVTALVPSETACLASSPGRTRRTEVWISREVMVGFLL*RASLA 151
Query: 306 XXXXXXXXXXXXXEFMMDMALDEMPMSGCTCLSTLKM*ILYV 431
EFMMDMALDE+PMSGCTCLSTLKM*ILYV
Sbjct: 150 ASAASFSKMSLMKEFMMDMALDEIPMSGCTCLSTLKM*ILYV 25
Score = 51.5 bits (106), Expect(4) = 3e-021
Identities = 24/39 (61%), Positives = 25/39 (64%)
Frame = +2 / -1
Query: 131 NRIVATCGGTLRGCKLGNRLGPFGYGVLGELAGEDEAHR 247
N V LR KLGNRLG GVLGELAG+DEAHR
Sbjct: 325 NMTVEPYSSNLR*SKLGNRLGALRDGVLGELAGKDEAHR 209
Score = 42.8 bits (87), Expect(2) = 9e-043
Identities = 17/22 (77%), Positives = 18/22 (81%)
Frame = +1 / -2
Query: 61 HSAIITNSTLLHEQPSTGLNMR 126
HSA TNSTL HE+PSTGLN R
Sbjct: 399 HSADTTNSTLFHEEPSTGLNTR 334
Score = 41.4 bits (84), Expect(4) = 3e-021
Identities = 16/17 (94%), Positives = 16/17 (94%)
Frame = +2 / -1
Query: 371 RDANVRVHLLEHLEDVD 421
RD NVRVHLLEHLEDVD
Sbjct: 85 RDTNVRVHLLEHLEDVD 35
Score = 38.2 bits (77), Expect(4) = 3e-021
Identities = 15/21 (71%), Positives = 17/21 (80%)
Frame = +3 / -1
Query: 60 SFSNYNKFYIVARTT*HRPKY 122
SFS YNKFY V+R T*H PK+
Sbjct: 400 SFSRYNKFYTVSRGT*HWPKH 338
Score = 35.4 bits (71), Expect(2) = 1e-052
Identities = 15/21 (71%), Positives = 18/21 (85%)
Frame = -1 / +2
Query: 122 IFRPVLGCSCNNVEFVIIAE* 60
+FRPVLG S N+VEFV+ AE*
Sbjct: 338 VFRPVLGSS*NSVEFVVSAE* 400
Score = 26.3 bits (51), Expect(4) = 3e-021
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +1 / -3
Query: 352 *WTWPWT 372
*WTWPWT
Sbjct: 104 *WTWPWT 84
>gb|CF772707.1|CF772707 DSBF1_38_D05.g1_A010 Drought-stressed before flowering Sorghum
bicolor cDNA clone DSBF1_38_D05_A010 3', mRNA sequence
Length = 420
Score = 175 bits (377), Expect(2) = 9e-049
Identities = 81/95 (85%), Positives = 81/95 (85%)
Frame = -2 / +3
Query: 409 KVLKQVHPDIGISSKAMSIMNSFINDIFXXXXXXXXXXARYNKKPTITSREIQTSVRLVL 230
KVLKQVHPDIGISSKAMSIMNSFINDIF ARYNKKPTITSREIQTSVRLVL
Sbjct: 3 KVLKQVHPDIGISSKAMSIMNSFINDIFEKLAAEAAKLARYNKKPTITSREIQTSVRLVL 182
Query: 229 PGELAKHAVSEGTKAVTKFTSS*GAAARCYDPV*F 125
PGELAKHAVSEGTKAVTKFTSS* AAARCY V F
Sbjct: 183 PGELAKHAVSEGTKAVTKFTSS*VAAARCYGLVSF 287
Score = 142 bits (305), Expect(2) = 2e-039
Identities = 65/95 (68%), Positives = 68/95 (71%)
Frame = +3 / -3
Query: 126 N*TGS*QRAAAP*EDVNLVTALVPSDTACLASSPGRTRRTEVWISREVMVGXXXXXXXXX 305
N T * RAAA *E+VNLVTALVPS+TACLASSPGRTRRTEVWISREVMVG
Sbjct: 286 NETRP*HRAAAT*EEVNLVTALVPSETACLASSPGRTRRTEVWISREVMVGFLL*RASLA 107
Query: 306 XXXXXXXXXXXXXEFMMDMALDEMPMSGCTCLSTL 410
EFMMDMALDE+PMSGCTCLSTL
Sbjct: 106 ASAASFSKMSLMKEFMMDMALDEIPMSGCTCLSTL 2
Score = 66.1 bits (138), Expect(4) = 2e-022
Identities = 27/39 (69%), Positives = 29/39 (74%)
Frame = +2 / -2
Query: 131 NRIVATCGGTLRGCKLGNRLGPFGYGVLGELAGEDEAHR 247
N+ VA C LRG KLGN LG G GVLGELAG+DEAHR
Sbjct: 281 NKTVAPCSSNLRGSKLGNSLGALGNGVLGELAGKDEAHR 165
Score = 41.4 bits (84), Expect(2) = 2e-039
Identities = 18/26 (69%), Positives = 19/26 (73%)
Frame = +1 / -3
Query: 64 SAIITNSTLLHEQPSTGLNMRIKQDR 141
SA TNSTL HEQPSTGLN R + R
Sbjct: 352 SADTTNSTLFHEQPSTGLNTRGNETR 275
Score = 39.6 bits (80), Expect(2) = 9e-049
Identities = 15/20 (75%), Positives = 18/20 (90%)
Frame = -1 / +3
Query: 122 IFRPVLGCSCNNVEFVIIAE 63
+FRPVLGCS N+VEFV+ AE
Sbjct: 294 VFRPVLGCS*NSVEFVVSAE 353
Score = 37.3 bits (75), Expect(4) = 2e-022
Identities = 14/21 (66%), Positives = 16/21 (76%)
Frame = +3 / -2
Query: 60 SFSNYNKFYIVARTT*HRPKY 122
SF YNKFY V+R T*H PK+
Sbjct: 356 SFGRYNKFYTVSRAT*HWPKH 294
Score = 31.8 bits (63), Expect(4) = 2e-022
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +2 / -2
Query: 371 RDANVRVHLLEHL 409
RD NVRVHLLEHL
Sbjct: 41 RDTNVRVHLLEHL 3
Score = 26.3 bits (51), Expect(4) = 2e-022
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +1 / -1
Query: 352 *WTWPWT 372
*WTWPWT
Sbjct: 60 *WTWPWT 40
>gb|BZ341857.1|BZ341857 ic79b05.g1 WGS-SbicolorF (JM107 adapted methyl filtered) Sorghum
bicolor genomic clone ic79b05 5', DNA sequence
Length = 685
Score = 186 bits (400), Expect = 4e-046
Identities = 84/95 (88%), Positives = 84/95 (88%)
Frame = -2 / -3
Query: 439 SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFXXXXXXXXXXARYNKKPTITSR 260
SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIF ARYNKKPTITSR
Sbjct: 359 SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAAEAAKLARYNKKPTITSR 180
Query: 259 EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS*GA 155
EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS* A
Sbjct: 179 EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS*AA 75
Score = 144 bits (309), Expect = 1e-033
Identities = 63/92 (68%), Positives = 67/92 (72%)
Frame = +3 / +1
Query: 156 AP*EDVNLVTALVPSDTACLASSPGRTRRTEVWISREVMVGXXXXXXXXXXXXXXXXXXX 335
A *++VNLVTALVPS+TAC ASSPGRTRRTEVWISREVMVG
Sbjct: 76 AA*DEVNLVTALVPSETACFASSPGRTRRTEVWISREVMVGFLLYRASLAASAASFSKMS 255
Query: 336 XXXEFMMDMALDEMPMSGCTCLSTLKM*ILYV 431
EFMMDMAL+EMPMSGCTC STLKM*ILYV
Sbjct: 256 LMKEFMMDMALEEMPMSGCTCFSTLKM*ILYV 351
>gb|CL152064.1|CL152064 104_335_10779694_116_31364_094 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10779694, DNA
sequence
Length = 690
Score = 186 bits (400), Expect = 4e-046
Identities = 84/95 (88%), Positives = 84/95 (88%)
Frame = -2 / -2
Query: 439 SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFXXXXXXXXXXARYNKKPTITSR 260
SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIF ARYNKKPTITSR
Sbjct: 545 SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAAEAAKLARYNKKPTITSR 366
Query: 259 EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS*GA 155
EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS* A
Sbjct: 365 EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS*AA 261
Score = 144 bits (309), Expect = 1e-033
Identities = 63/92 (68%), Positives = 67/92 (72%)
Frame = +3 / +1
Query: 156 AP*EDVNLVTALVPSDTACLASSPGRTRRTEVWISREVMVGXXXXXXXXXXXXXXXXXXX 335
A *++VNLVTALVPS+TAC ASSPGRTRRTEVWISREVMVG
Sbjct: 262 AA*DEVNLVTALVPSETACFASSPGRTRRTEVWISREVMVGFLLYRASLAASAASFSKMS 441
Query: 336 XXXEFMMDMALDEMPMSGCTCLSTLKM*ILYV 431
EFMMDMAL+EMPMSGCTC STLKM*ILYV
Sbjct: 442 LMKEFMMDMALEEMPMSGCTCFSTLKM*ILYV 537
>gb|CW155043.1|CW155043 104_557_11145924_116_36362_042 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11145924, DNA
sequence
Length = 743
Score = 186 bits (400), Expect = 4e-046
Identities = 84/95 (88%), Positives = 84/95 (88%)
Frame = -2 / +1
Query: 439 SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFXXXXXXXXXXARYNKKPTITSR 260
SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIF ARYNKKPTITSR
Sbjct: 274 SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAAEAAKLARYNKKPTITSR 453
Query: 259 EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS*GA 155
EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS* A
Sbjct: 454 EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS*AA 558
Score = 144 bits (309), Expect = 1e-033
Identities = 63/92 (68%), Positives = 67/92 (72%)
Frame = +3 / -1
Query: 156 AP*EDVNLVTALVPSDTACLASSPGRTRRTEVWISREVMVGXXXXXXXXXXXXXXXXXXX 335
A *++VNLVTALVPS+TAC ASSPGRTRRTEVWISREVMVG
Sbjct: 557 AA*DEVNLVTALVPSETACFASSPGRTRRTEVWISREVMVGFLLYRASLAASAASFSKMS 378
Query: 336 XXXEFMMDMALDEMPMSGCTCLSTLKM*ILYV 431
EFMMDMAL+EMPMSGCTC STLKM*ILYV
Sbjct: 377 LMKEFMMDMALEEMPMSGCTCFSTLKM*ILYV 282
>gb|CW155044.1|CW155044 104_557_11145924_148_36361_042 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11145924, DNA
sequence
Length = 679
Score = 186 bits (400), Expect = 4e-046
Identities = 84/95 (88%), Positives = 84/95 (88%)
Frame = -2 / -1
Query: 439 SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFXXXXXXXXXXARYNKKPTITSR 260
SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIF ARYNKKPTITSR
Sbjct: 610 SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAAEAAKLARYNKKPTITSR 431
Query: 259 EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS*GA 155
EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS* A
Sbjct: 430 EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS*AA 326
Score = 144 bits (309), Expect = 1e-033
Identities = 63/92 (68%), Positives = 67/92 (72%)
Frame = +3 / +3
Query: 156 AP*EDVNLVTALVPSDTACLASSPGRTRRTEVWISREVMVGXXXXXXXXXXXXXXXXXXX 335
A *++VNLVTALVPS+TAC ASSPGRTRRTEVWISREVMVG
Sbjct: 327 AA*DEVNLVTALVPSETACFASSPGRTRRTEVWISREVMVGFLLYRASLAASAASFSKMS 506
Query: 336 XXXEFMMDMALDEMPMSGCTCLSTLKM*ILYV 431
EFMMDMAL+EMPMSGCTC STLKM*ILYV
Sbjct: 507 LMKEFMMDMALEEMPMSGCTCFSTLKM*ILYV 602
>gb|BF480763.1|BF480763 FM1_14_F11.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 592
Score = 186 bits (400), Expect = 4e-046
Identities = 84/95 (88%), Positives = 84/95 (88%)
Frame = -2 / +1
Query: 439 SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFXXXXXXXXXXARYNKKPTITSR 260
SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIF ARYNKKPTITSR
Sbjct: 154 SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAAEAAKLARYNKKPTITSR 333
Query: 259 EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS*GA 155
EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS* A
Sbjct: 334 EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS*AA 438
Score = 144 bits (309), Expect = 1e-033
Identities = 63/92 (68%), Positives = 67/92 (72%)
Frame = +3 / -3
Query: 156 AP*EDVNLVTALVPSDTACLASSPGRTRRTEVWISREVMVGXXXXXXXXXXXXXXXXXXX 335
A *++VNLVTALVPS+TAC ASSPGRTRRTEVWISREVMVG
Sbjct: 437 AA*DEVNLVTALVPSETACFASSPGRTRRTEVWISREVMVGFLLYRASLAASAASFSKMS 258
Query: 336 XXXEFMMDMALDEMPMSGCTCLSTLKM*ILYV 431
EFMMDMAL+EMPMSGCTC STLKM*ILYV
Sbjct: 257 LMKEFMMDMALEEMPMSGCTCFSTLKM*ILYV 162
>gb|CD462726.1|CD462726 ETH1_39_B03.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_39_B03_A002 5', mRNA sequence
Length = 637
Score = 186 bits (400), Expect = 4e-046
Identities = 84/95 (88%), Positives = 84/95 (88%)
Frame = -2 / +2
Query: 439 SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFXXXXXXXXXXARYNKKPTITSR 260
SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIF ARYNKKPTITSR
Sbjct: 272 SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAAEAAKLARYNKKPTITSR 451
Query: 259 EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS*GA 155
EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS* A
Sbjct: 452 EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS*AA 556
Score = 144 bits (309), Expect = 1e-033
Identities = 63/92 (68%), Positives = 67/92 (72%)
Frame = +3 / -2
Query: 156 AP*EDVNLVTALVPSDTACLASSPGRTRRTEVWISREVMVGXXXXXXXXXXXXXXXXXXX 335
A *++VNLVTALVPS+TAC ASSPGRTRRTEVWISREVMVG
Sbjct: 555 AA*DEVNLVTALVPSETACFASSPGRTRRTEVWISREVMVGFLLYRASLAASAASFSKMS 376
Query: 336 XXXEFMMDMALDEMPMSGCTCLSTLKM*ILYV 431
EFMMDMAL+EMPMSGCTC STLKM*ILYV
Sbjct: 375 LMKEFMMDMALEEMPMSGCTCFSTLKM*ILYV 280
>gb|CX606979.1|CX606979 ANR1_6_B05.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_6_B05_A002 3', mRNA sequence
Length = 665
Score = 186 bits (400), Expect = 4e-046
Identities = 84/95 (88%), Positives = 84/95 (88%)
Frame = -2 / +3
Query: 439 SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFXXXXXXXXXXARYNKKPTITSR 260
SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIF ARYNKKPTITSR
Sbjct: 231 SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAAEAAKLARYNKKPTITSR 410
Query: 259 EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS*GA 155
EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS* A
Sbjct: 411 EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS*AA 515
Score = 144 bits (309), Expect = 1e-033
Identities = 63/92 (68%), Positives = 67/92 (72%)
Frame = +3 / -2
Query: 156 AP*EDVNLVTALVPSDTACLASSPGRTRRTEVWISREVMVGXXXXXXXXXXXXXXXXXXX 335
A *++VNLVTALVPS+TAC ASSPGRTRRTEVWISREVMVG
Sbjct: 514 AA*DEVNLVTALVPSETACFASSPGRTRRTEVWISREVMVGFLLYRASLAASAASFSKMS 335
Query: 336 XXXEFMMDMALDEMPMSGCTCLSTLKM*ILYV 431
EFMMDMAL+EMPMSGCTC STLKM*ILYV
Sbjct: 334 LMKEFMMDMALEEMPMSGCTCFSTLKM*ILYV 239
>gb|CX607063.1|CX607063 ANR1_6_B05.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_6_B05_A002 5', mRNA sequence
Length = 702
Score = 186 bits (400), Expect = 4e-046
Identities = 84/95 (88%), Positives = 84/95 (88%)
Frame = -2 / +1
Query: 439 SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFXXXXXXXXXXARYNKKPTITSR 260
SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIF ARYNKKPTITSR
Sbjct: 250 SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAAEAAKLARYNKKPTITSR 429
Query: 259 EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS*GA 155
EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS* A
Sbjct: 430 EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS*AA 534
Score = 144 bits (309), Expect = 1e-033
Identities = 63/92 (68%), Positives = 67/92 (72%)
Frame = +3 / -2
Query: 156 AP*EDVNLVTALVPSDTACLASSPGRTRRTEVWISREVMVGXXXXXXXXXXXXXXXXXXX 335
A *++VNLVTALVPS+TAC ASSPGRTRRTEVWISREVMVG
Sbjct: 533 AA*DEVNLVTALVPSETACFASSPGRTRRTEVWISREVMVGFLLYRASLAASAASFSKMS 354
Query: 336 XXXEFMMDMALDEMPMSGCTCLSTLKM*ILYV 431
EFMMDMAL+EMPMSGCTC STLKM*ILYV
Sbjct: 353 LMKEFMMDMALEEMPMSGCTCFSTLKM*ILYV 258
>gb|CX610420.1|CX610420 ANR1_18_D02.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_18_D02_A002 5', mRNA sequence
Length = 711
Score = 186 bits (400), Expect = 4e-046
Identities = 84/95 (88%), Positives = 84/95 (88%)
Frame = -2 / +3
Query: 439 SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFXXXXXXXXXXARYNKKPTITSR 260
SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIF ARYNKKPTITSR
Sbjct: 249 SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAAEAAKLARYNKKPTITSR 428
Query: 259 EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS*GA 155
EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS* A
Sbjct: 429 EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS*AA 533
Score = 144 bits (309), Expect = 1e-033
Identities = 63/92 (68%), Positives = 67/92 (72%)
Frame = +3 / -3
Query: 156 AP*EDVNLVTALVPSDTACLASSPGRTRRTEVWISREVMVGXXXXXXXXXXXXXXXXXXX 335
A *++VNLVTALVPS+TAC ASSPGRTRRTEVWISREVMVG
Sbjct: 532 AA*DEVNLVTALVPSETACFASSPGRTRRTEVWISREVMVGFLLYRASLAASAASFSKMS 353
Query: 336 XXXEFMMDMALDEMPMSGCTCLSTLKM*ILYV 431
EFMMDMAL+EMPMSGCTC STLKM*ILYV
Sbjct: 352 LMKEFMMDMALEEMPMSGCTCFSTLKM*ILYV 257
>gb|CW128767.1|CW128767 104_510_11114194_148_34755_039 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11114194, DNA
sequence
Length = 652
Score = 184 bits (397), Expect = 9e-046
Identities = 84/96 (87%), Positives = 84/96 (87%)
Frame = -2 / -3
Query: 439 SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFXXXXXXXXXXARYNKKPTITSR 260
SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIF ARYNKKPTITSR
Sbjct: 470 SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAGEAAKLARYNKKPTITSR 291
Query: 259 EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS*GAA 152
EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS* A
Sbjct: 290 EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS*AFA 183
Score = 86.8 bits (183), Expect(2) = 2e-030
Identities = 37/42 (88%), Positives = 40/42 (95%)
Frame = +3 / +1
Query: 153 AAP*EDVNLVTALVPSDTACLASSPGRTRRTEVWISREVMVG 278
A *++VNLVTALVPS+TACLASSPGRTRRTEVWISREVMVG
Sbjct: 184 ANA*DEVNLVTALVPSETACLASSPGRTRRTEVWISREVMVG 309
Score = 67.0 bits (140), Expect(2) = 2e-030
Identities = 27/29 (93%), Positives = 28/29 (96%)
Frame = +3 / +1
Query: 345 EFMMDMALDEMPMSGCTCLSTLKM*ILYV 431
EFMMDMAL+EMPMSGCTC STLKM*ILYV
Sbjct: 376 EFMMDMALEEMPMSGCTCFSTLKM*ILYV 462
>gb|AI723845.1|AI723845 RHIZ1_28_B06.y1_A001 Rhizome1 (RHIZ1) Sorghum halepense cDNA, mRNA
sequence
Length = 557
Score = 184 bits (397), Expect = 9e-046
Identities = 84/96 (87%), Positives = 84/96 (87%)
Frame = -2 / +1
Query: 439 SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFXXXXXXXXXXARYNKKPTITSR 260
SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIF ARYNKKPTITSR
Sbjct: 4 SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAGEAAKLARYNKKPTITSR 183
Query: 259 EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS*GAA 152
EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS* A
Sbjct: 184 EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS*AFA 291
Score = 86.8 bits (183), Expect(2) = 6e-030
Identities = 37/42 (88%), Positives = 40/42 (95%)
Frame = +3 / -1
Query: 153 AAP*EDVNLVTALVPSDTACLASSPGRTRRTEVWISREVMVG 278
A *++VNLVTALVPS+TACLASSPGRTRRTEVWISREVMVG
Sbjct: 290 ANA*DEVNLVTALVPSETACLASSPGRTRRTEVWISREVMVG 165
Score = 65.2 bits (136), Expect(2) = 6e-030
Identities = 26/29 (89%), Positives = 28/29 (96%)
Frame = +3 / -1
Query: 345 EFMMDMALDEMPMSGCTCLSTLKM*ILYV 431
EFMMDMAL+E+PMSGCTC STLKM*ILYV
Sbjct: 98 EFMMDMALEEIPMSGCTCFSTLKM*ILYV 12
>gb|BG240440.1|BG240440 OV1_30_A12.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 555
Score = 184 bits (397), Expect = 9e-046
Identities = 84/96 (87%), Positives = 84/96 (87%)
Frame = -2 / +2
Query: 439 SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFXXXXXXXXXXARYNKKPTITSR 260
SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIF ARYNKKPTITSR
Sbjct: 254 SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAGEAAKLARYNKKPTITSR 433
Query: 259 EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS*GAA 152
EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS* A
Sbjct: 434 EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS*AFA 541
Score = 86.8 bits (183), Expect(2) = 2e-030
Identities = 37/42 (88%), Positives = 40/42 (95%)
Frame = +3 / -1
Query: 153 AAP*EDVNLVTALVPSDTACLASSPGRTRRTEVWISREVMVG 278
A *++VNLVTALVPS+TACLASSPGRTRRTEVWISREVMVG
Sbjct: 540 ANA*DEVNLVTALVPSETACLASSPGRTRRTEVWISREVMVG 415
Score = 67.0 bits (140), Expect(2) = 2e-030
Identities = 27/29 (93%), Positives = 28/29 (96%)
Frame = +3 / -1
Query: 345 EFMMDMALDEMPMSGCTCLSTLKM*ILYV 431
EFMMDMAL+EMPMSGCTC STLKM*ILYV
Sbjct: 348 EFMMDMALEEMPMSGCTCFSTLKM*ILYV 262
>gb|BG488106.1|BG488106 RHIZ2_63_D10.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 514
Score = 184 bits (397), Expect = 9e-046
Identities = 84/96 (87%), Positives = 84/96 (87%)
Frame = -2 / +3
Query: 439 SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFXXXXXXXXXXARYNKKPTITSR 260
SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIF ARYNKKPTITSR
Sbjct: 132 SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAGEAAKLARYNKKPTITSR 311
Query: 259 EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS*GAA 152
EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS* A
Sbjct: 312 EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS*AFA 419
Score = 86.8 bits (183), Expect(2) = 6e-030
Identities = 37/42 (88%), Positives = 40/42 (95%)
Frame = +3 / -1
Query: 153 AAP*EDVNLVTALVPSDTACLASSPGRTRRTEVWISREVMVG 278
A *++VNLVTALVPS+TACLASSPGRTRRTEVWISREVMVG
Sbjct: 418 ANA*DEVNLVTALVPSETACLASSPGRTRRTEVWISREVMVG 293
Score = 65.2 bits (136), Expect(2) = 6e-030
Identities = 26/29 (89%), Positives = 28/29 (96%)
Frame = +3 / -1
Query: 345 EFMMDMALDEMPMSGCTCLSTLKM*ILYV 431
EFMMDMAL+E+PMSGCTC STLKM*ILYV
Sbjct: 226 EFMMDMALEEIPMSGCTCFSTLKM*ILYV 140
>gb|BG488416.1|BG488416 RHIZ2_63_D10.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 556
Score = 184 bits (397), Expect = 9e-046
Identities = 84/96 (87%), Positives = 84/96 (87%)
Frame = -2 / +2
Query: 439 SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFXXXXXXXXXXARYNKKPTITSR 260
SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIF ARYNKKPTITSR
Sbjct: 260 SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAGEAAKLARYNKKPTITSR 439
Query: 259 EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS*GAA 152
EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS* A
Sbjct: 440 EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS*AFA 547
Score = 86.8 bits (183), Expect(2) = 6e-030
Identities = 37/42 (88%), Positives = 40/42 (95%)
Frame = +3 / -2
Query: 153 AAP*EDVNLVTALVPSDTACLASSPGRTRRTEVWISREVMVG 278
A *++VNLVTALVPS+TACLASSPGRTRRTEVWISREVMVG
Sbjct: 546 ANA*DEVNLVTALVPSETACLASSPGRTRRTEVWISREVMVG 421
Score = 65.2 bits (136), Expect(2) = 6e-030
Identities = 26/29 (89%), Positives = 28/29 (96%)
Frame = +3 / -2
Query: 345 EFMMDMALDEMPMSGCTCLSTLKM*ILYV 431
EFMMDMAL+E+PMSGCTC STLKM*ILYV
Sbjct: 354 EFMMDMALEEIPMSGCTCFSTLKM*ILYV 268
>gb|CW129063.1|CW129063 104_511_11114353_148_34760_015 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11114353, DNA
sequence
Length = 698
Score = 184 bits (396), Expect = 1e-045
Identities = 83/93 (89%), Positives = 83/93 (89%)
Frame = -2 / +2
Query: 439 SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFXXXXXXXXXXARYNKKPTITSR 260
SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIF ARYNKKPTITSR
Sbjct: 362 SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAAESAKLARYNKKPTITSR 541
Query: 259 EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS* 161
EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS*
Sbjct: 542 EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS* 640
Score = 87.7 bits (185), Expect(2) = 1e-028
Identities = 37/39 (94%), Positives = 39/39 (100%)
Frame = +3 / -3
Query: 162 *EDVNLVTALVPSDTACLASSPGRTRRTEVWISREVMVG 278
*E+VNLVTALVPS+TACLASSPGRTRRTEVWISREVMVG
Sbjct: 639 *EEVNLVTALVPSETACLASSPGRTRRTEVWISREVMVG 523
Score = 59.7 bits (124), Expect(2) = 1e-028
Identities = 24/27 (88%), Positives = 25/27 (92%)
Frame = +3 / -3
Query: 345 EFMMDMALDEMPMSGCTCLSTLKM*IL 425
EFMMDMAL+EMPMSGCTC TLKM*IL
Sbjct: 456 EFMMDMALEEMPMSGCTCFRTLKM*IL 376
>gb|CW188377.1|CW188377 104_608_11172997_148_36734_061 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11172997, DNA
sequence
Length = 707
Score = 184 bits (396), Expect = 1e-045
Identities = 83/93 (89%), Positives = 83/93 (89%)
Frame = -2 / +2
Query: 439 SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFXXXXXXXXXXARYNKKPTITSR 260
SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIF ARYNKKPTITSR
Sbjct: 278 SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAAEAAKLARYNKKPTITSR 457
Query: 259 EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS* 161
EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS*
Sbjct: 458 EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS* 556
Score = 135 bits (290), Expect = 5e-031
Identities = 60/88 (68%), Positives = 65/88 (73%)
Frame = +3 / -3
Query: 162 *EDVNLVTALVPSDTACLASSPGRTRRTEVWISREVMVGXXXXXXXXXXXXXXXXXXXXX 341
*++VNLVTALVPS+TACLASSPGRTRRT+VWIS EVMVG
Sbjct: 555 *DEVNLVTALVPSETACLASSPGRTRRTDVWISLEVMVGFLL*RASLAASAASFSKMSLM 376
Query: 342 XEFMMDMALDEMPMSGCTCLSTLKM*IL 425
EFMMDMAL+EMPMSGCTCLSTLKM*IL
Sbjct: 375 KEFMMDMALEEMPMSGCTCLSTLKM*IL 292
>gb|CW297850.1|CW297850 104_780_11462260_116_35647_012 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11462260, DNA
sequence
Length = 662
Score = 184 bits (396), Expect = 1e-045
Identities = 83/93 (89%), Positives = 83/93 (89%)
Frame = -2 / +2
Query: 439 SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFXXXXXXXXXXARYNKKPTITSR 260
SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIF ARYNKKPTITSR
Sbjct: 89 SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAAESAKLARYNKKPTITSR 268
Query: 259 EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS* 161
EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS*
Sbjct: 269 EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS* 367
Score = 87.7 bits (185), Expect(2) = 1e-028
Identities = 37/39 (94%), Positives = 39/39 (100%)
Frame = +3 / -3
Query: 162 *EDVNLVTALVPSDTACLASSPGRTRRTEVWISREVMVG 278
*E+VNLVTALVPS+TACLASSPGRTRRTEVWISREVMVG
Sbjct: 366 *EEVNLVTALVPSETACLASSPGRTRRTEVWISREVMVG 250
Score = 59.7 bits (124), Expect(2) = 1e-028
Identities = 24/27 (88%), Positives = 25/27 (92%)
Frame = +3 / -3
Query: 345 EFMMDMALDEMPMSGCTCLSTLKM*IL 425
EFMMDMAL+EMPMSGCTC TLKM*IL
Sbjct: 183 EFMMDMALEEMPMSGCTCFRTLKM*IL 103
>gb|CW306661.1|CW306661 104_792_11466961_148_35713_007 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11466961, DNA
sequence
Length = 711
Score = 184 bits (396), Expect = 1e-045
Identities = 83/93 (89%), Positives = 83/93 (89%)
Frame = -2 / +2
Query: 439 SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFXXXXXXXXXXARYNKKPTITSR 260
SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIF ARYNKKPTITSR
Sbjct: 14 SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAAESAKLARYNKKPTITSR 193
Query: 259 EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS* 161
EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS*
Sbjct: 194 EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS* 292
Score = 84.9 bits (179), Expect(2) = 6e-029
Identities = 35/39 (89%), Positives = 39/39 (100%)
Frame = +3 / -1
Query: 162 *EDVNLVTALVPSDTACLASSPGRTRRTEVWISREVMVG 278
*++VNLVTALVPS+TACLASSPGRTRRTEVWISR+VMVG
Sbjct: 291 *DEVNLVTALVPSETACLASSPGRTRRTEVWISRDVMVG 175
Score = 63.8 bits (133), Expect(2) = 6e-029
Identities = 26/27 (96%), Positives = 27/27 (100%)
Frame = +3 / -1
Query: 345 EFMMDMALDEMPMSGCTCLSTLKM*IL 425
EFMMDMAL+EMPMSGCTCLSTLKM*IL
Sbjct: 108 EFMMDMALEEMPMSGCTCLSTLKM*IL 28
>gb|CW317075.1|CW317075 104_808_11473223_116_35851_084 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11473223, DNA
sequence
Length = 600
Score = 184 bits (396), Expect = 1e-045
Identities = 83/93 (89%), Positives = 83/93 (89%)
Frame = -2 / -1
Query: 439 SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFXXXXXXXXXXARYNKKPTITSR 260
SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIF ARYNKKPTITSR
Sbjct: 594 SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAAESAKLARYNKKPTITSR 415
Query: 259 EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS* 161
EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS*
Sbjct: 414 EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS* 316
Score = 87.7 bits (185), Expect(2) = 2e-030
Identities = 37/39 (94%), Positives = 39/39 (100%)
Frame = +3 / +2
Query: 162 *EDVNLVTALVPSDTACLASSPGRTRRTEVWISREVMVG 278
*E+VNLVTALVPS+TACLASSPGRTRRTEVWISREVMVG
Sbjct: 317 *EEVNLVTALVPSETACLASSPGRTRRTEVWISREVMVG 433
Score = 65.7 bits (137), Expect(2) = 2e-030
Identities = 27/27 (100%), Positives = 27/27 (100%)
Frame = +3 / +2
Query: 345 EFMMDMALDEMPMSGCTCLSTLKM*IL 425
EFMMDMALDEMPMSGCTCLSTLKM*IL
Sbjct: 500 EFMMDMALDEMPMSGCTCLSTLKM*IL 580
>gb|CW319235.1|CW319235 104_811_11474377_148_35884_003 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11474377, DNA
sequence
Length = 704
Score = 184 bits (396), Expect = 1e-045
Identities = 83/93 (89%), Positives = 83/93 (89%)
Frame = -2 / +1
Query: 439 SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFXXXXXXXXXXARYNKKPTITSR 260
SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIF ARYNKKPTITSR
Sbjct: 328 SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAAESAKLARYNKKPTITSR 507
Query: 259 EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS* 161
EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS*
Sbjct: 508 EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS* 606
Score = 87.7 bits (185), Expect(2) = 2e-030
Identities = 37/39 (94%), Positives = 39/39 (100%)
Frame = +3 / -1
Query: 162 *EDVNLVTALVPSDTACLASSPGRTRRTEVWISREVMVG 278
*E+VNLVTALVPS+TACLASSPGRTRRTEVWISREVMVG
Sbjct: 605 *EEVNLVTALVPSETACLASSPGRTRRTEVWISREVMVG 489
Score = 65.7 bits (137), Expect(2) = 2e-030
Identities = 27/27 (100%), Positives = 27/27 (100%)
Frame = +3 / -1
Query: 345 EFMMDMALDEMPMSGCTCLSTLKM*IL 425
EFMMDMALDEMPMSGCTCLSTLKM*IL
Sbjct: 422 EFMMDMALDEMPMSGCTCLSTLKM*IL 342
>gb|CW361905.1|CW361905 fsbb001f030l13f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f030l13, DNA
sequence
Length = 669
Score = 184 bits (396), Expect = 1e-045
Identities = 83/93 (89%), Positives = 83/93 (89%)
Frame = -2 / +2
Query: 439 SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFXXXXXXXXXXARYNKKPTITSR 260
SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIF ARYNKKPTITSR
Sbjct: 23 SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAAEAAKLARYNKKPTITSR 202
Query: 259 EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS* 161
EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS*
Sbjct: 203 EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS* 301
Score = 144 bits (309), Expect = 1e-033
Identities = 65/96 (67%), Positives = 68/96 (70%)
Frame = +3 / -1
Query: 144 QRAAAP*EDVNLVTALVPSDTACLASSPGRTRRTEVWISREVMVGXXXXXXXXXXXXXXX 323
+R *E VNLVTALVPS+TACLASSPGRTRRTEVWISR+VMVG
Sbjct: 318 RRRGPI*ELVNLVTALVPSETACLASSPGRTRRTEVWISRDVMVGFLLYRASLAASAASF 139
Query: 324 XXXXXXXEFMMDMALDEMPMSGCTCLSTLKM*ILYV 431
EFMMDMALDEMPMSGCTC STLKM*ILYV
Sbjct: 138 SKMSLMKEFMMDMALDEMPMSGCTCFSTLKM*ILYV 31
>gb|CW410848.1|CW410848 fsbb001f105m09k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f105m09, DNA
sequence
Length = 598
Score = 184 bits (396), Expect = 1e-045
Identities = 83/95 (87%), Positives = 83/95 (87%)
Frame = -2 / +3
Query: 439 SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFXXXXXXXXXXARYNKKPTITSR 260
SVETYKIYIFKVLKQVHPDIGISSK MSIMNSFINDIF ARYNKKPTITSR
Sbjct: 249 SVETYKIYIFKVLKQVHPDIGISSKGMSIMNSFINDIFEKLAAEAAKLARYNKKPTITSR 428
Query: 259 EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS*GA 155
EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS* A
Sbjct: 429 EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS*AA 533
Score = 142 bits (304), Expect = 6e-033
Identities = 62/92 (67%), Positives = 66/92 (71%)
Frame = +3 / -1
Query: 156 AP*EDVNLVTALVPSDTACLASSPGRTRRTEVWISREVMVGXXXXXXXXXXXXXXXXXXX 335
A *++VNLVTALVPS+TAC ASSPGRTRRTEVWISREVMVG
Sbjct: 532 AA*DEVNLVTALVPSETACFASSPGRTRRTEVWISREVMVGFLLYRASLAASAASFSKMS 353
Query: 336 XXXEFMMDMALDEMPMSGCTCLSTLKM*ILYV 431
EFMMDM L+EMPMSGCTC STLKM*ILYV
Sbjct: 352 LMKEFMMDMPLEEMPMSGCTCFSTLKM*ILYV 257
>gb|CW417908.1|CW417908 fsbb001f121c05f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f121c05, DNA
sequence
Length = 812
Score = 184 bits (396), Expect = 1e-045
Identities = 83/93 (89%), Positives = 83/93 (89%)
Frame = -2 / +2
Query: 439 SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFXXXXXXXXXXARYNKKPTITSR 260
SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIF ARYNKKPTITSR
Sbjct: 278 SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAAESAKLARYNKKPTITSR 457
Query: 259 EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS* 161
EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS*
Sbjct: 458 EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS* 556
Score = 87.7 bits (185), Expect(2) = 2e-030
Identities = 37/39 (94%), Positives = 39/39 (100%)
Frame = +3 / -3
Query: 162 *EDVNLVTALVPSDTACLASSPGRTRRTEVWISREVMVG 278
*E+VNLVTALVPS+TACLASSPGRTRRTEVWISREVMVG
Sbjct: 555 *EEVNLVTALVPSETACLASSPGRTRRTEVWISREVMVG 439
Score = 65.7 bits (137), Expect(2) = 2e-030
Identities = 27/27 (100%), Positives = 27/27 (100%)
Frame = +3 / -3
Query: 345 EFMMDMALDEMPMSGCTCLSTLKM*IL 425
EFMMDMALDEMPMSGCTCLSTLKM*IL
Sbjct: 372 EFMMDMALDEMPMSGCTCLSTLKM*IL 292
>gb|AW680031.1|AW680031 WS1_34_A02.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 558
Score = 184 bits (396), Expect = 1e-045
Identities = 83/93 (89%), Positives = 83/93 (89%)
Frame = -2 / +3
Query: 439 SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFXXXXXXXXXXARYNKKPTITSR 260
SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIF ARYNKKPTITSR
Sbjct: 150 SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAAESAKLARYNKKPTITSR 329
Query: 259 EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS* 161
EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS*
Sbjct: 330 EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS* 428
Score = 87.7 bits (185), Expect(2) = 2e-030
Identities = 37/39 (94%), Positives = 39/39 (100%)
Frame = +3 / -3
Query: 162 *EDVNLVTALVPSDTACLASSPGRTRRTEVWISREVMVG 278
*E+VNLVTALVPS+TACLASSPGRTRRTEVWISREVMVG
Sbjct: 427 *EEVNLVTALVPSETACLASSPGRTRRTEVWISREVMVG 311
Score = 65.7 bits (137), Expect(2) = 2e-030
Identities = 27/27 (100%), Positives = 27/27 (100%)
Frame = +3 / -3
Query: 345 EFMMDMALDEMPMSGCTCLSTLKM*IL 425
EFMMDMALDEMPMSGCTCLSTLKM*IL
Sbjct: 244 EFMMDMALDEMPMSGCTCLSTLKM*IL 164
>gb|BE355360.1|BE355360 DG1_114_A03.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 526
Score = 184 bits (396), Expect = 1e-045
Identities = 83/93 (89%), Positives = 83/93 (89%)
Frame = -2 / +2
Query: 439 SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFXXXXXXXXXXARYNKKPTITSR 260
SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIF ARYNKKPTITSR
Sbjct: 248 SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAAESAKLARYNKKPTITSR 427
Query: 259 EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS* 161
EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS*
Sbjct: 428 EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS* 526
Score = 87.7 bits (185), Expect(2) = 2e-030
Identities = 37/39 (94%), Positives = 39/39 (100%)
Frame = +3 / -2
Query: 162 *EDVNLVTALVPSDTACLASSPGRTRRTEVWISREVMVG 278
*E+VNLVTALVPS+TACLASSPGRTRRTEVWISREVMVG
Sbjct: 525 *EEVNLVTALVPSETACLASSPGRTRRTEVWISREVMVG 409
Score = 65.7 bits (137), Expect(2) = 2e-030
Identities = 27/27 (100%), Positives = 27/27 (100%)
Frame = +3 / -2
Query: 345 EFMMDMALDEMPMSGCTCLSTLKM*IL 425
EFMMDMALDEMPMSGCTCLSTLKM*IL
Sbjct: 342 EFMMDMALDEMPMSGCTCLSTLKM*IL 262
>gb|BE355526.1|BE355526 DG1_114_A03.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 662
Score = 184 bits (396), Expect = 1e-045
Identities = 83/93 (89%), Positives = 83/93 (89%)
Frame = -2 / +3
Query: 439 SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFXXXXXXXXXXARYNKKPTITSR 260
SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIF ARYNKKPTITSR
Sbjct: 144 SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAAESAKLARYNKKPTITSR 323
Query: 259 EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS* 161
EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS*
Sbjct: 324 EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS* 422
Score = 87.7 bits (185), Expect(2) = 2e-030
Identities = 37/39 (94%), Positives = 39/39 (100%)
Frame = +3 / -2
Query: 162 *EDVNLVTALVPSDTACLASSPGRTRRTEVWISREVMVG 278
*E+VNLVTALVPS+TACLASSPGRTRRTEVWISREVMVG
Sbjct: 421 *EEVNLVTALVPSETACLASSPGRTRRTEVWISREVMVG 305
Score = 65.7 bits (137), Expect(2) = 2e-030
Identities = 27/27 (100%), Positives = 27/27 (100%)
Frame = +3 / -2
Query: 345 EFMMDMALDEMPMSGCTCLSTLKM*IL 425
EFMMDMALDEMPMSGCTCLSTLKM*IL
Sbjct: 238 EFMMDMALDEMPMSGCTCLSTLKM*IL 158
>gb|BE917707.1|BE917707 OV1_6_B04.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 554
Score = 184 bits (396), Expect = 1e-045
Identities = 83/93 (89%), Positives = 83/93 (89%)
Frame = -2 / +1
Query: 439 SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFXXXXXXXXXXARYNKKPTITSR 260
SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIF ARYNKKPTITSR
Sbjct: 271 SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAAESAKLARYNKKPTITSR 450
Query: 259 EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS* 161
EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS*
Sbjct: 451 EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS* 549
Score = 84.9 bits (179), Expect(2) = 6e-029
Identities = 35/39 (89%), Positives = 39/39 (100%)
Frame = +3 / -1
Query: 162 *EDVNLVTALVPSDTACLASSPGRTRRTEVWISREVMVG 278
*++VNLVTALVPS+TACLASSPGRTRRTEVWISR+VMVG
Sbjct: 548 *DEVNLVTALVPSETACLASSPGRTRRTEVWISRDVMVG 432
Score = 63.8 bits (133), Expect(2) = 6e-029
Identities = 26/27 (96%), Positives = 27/27 (100%)
Frame = +3 / -1
Query: 345 EFMMDMALDEMPMSGCTCLSTLKM*IL 425
EFMMDMAL+EMPMSGCTCLSTLKM*IL
Sbjct: 365 EFMMDMALEEMPMSGCTCLSTLKM*IL 285
>gb|BG052252.1|BG052252 RHIZ2_12_B05.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 464
Score = 184 bits (396), Expect = 1e-045
Identities = 83/93 (89%), Positives = 83/93 (89%)
Frame = -2 / +1
Query: 439 SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFXXXXXXXXXXARYNKKPTITSR 260
SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIF ARYNKKPTITSR
Sbjct: 82 SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAAESAKLARYNKKPTITSR 261
Query: 259 EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS* 161
EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS*
Sbjct: 262 EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS* 360
Score = 87.7 bits (185), Expect(2) = 1e-028
Identities = 37/39 (94%), Positives = 39/39 (100%)
Frame = +3 / -1
Query: 162 *EDVNLVTALVPSDTACLASSPGRTRRTEVWISREVMVG 278
*E+VNLVTALVPS+TACLASSPGRTRRTEVWISREVMVG
Sbjct: 359 *EEVNLVTALVPSETACLASSPGRTRRTEVWISREVMVG 243
Score = 59.7 bits (124), Expect(2) = 1e-028
Identities = 24/27 (88%), Positives = 25/27 (92%)
Frame = +3 / -1
Query: 345 EFMMDMALDEMPMSGCTCLSTLKM*IL 425
EFMMDMAL+EMPMSGCTC TLKM*IL
Sbjct: 176 EFMMDMALEEMPMSGCTCFRTLKM*IL 96
>gb|BG102543.1|BG102543 RHIZ2_34_D04.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 495
Score = 184 bits (396), Expect = 1e-045
Identities = 83/93 (89%), Positives = 83/93 (89%)
Frame = -2 / +2
Query: 439 SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFXXXXXXXXXXARYNKKPTITSR 260
SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIF ARYNKKPTITSR
Sbjct: 98 SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAAESAKLARYNKKPTITSR 277
Query: 259 EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS* 161
EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS*
Sbjct: 278 EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS* 376
Score = 87.7 bits (185), Expect(2) = 1e-028
Identities = 37/39 (94%), Positives = 39/39 (100%)
Frame = +3 / -1
Query: 162 *EDVNLVTALVPSDTACLASSPGRTRRTEVWISREVMVG 278
*E+VNLVTALVPS+TACLASSPGRTRRTEVWISREVMVG
Sbjct: 375 *EEVNLVTALVPSETACLASSPGRTRRTEVWISREVMVG 259
Score = 59.7 bits (124), Expect(2) = 1e-028
Identities = 24/27 (88%), Positives = 25/27 (92%)
Frame = +3 / -1
Query: 345 EFMMDMALDEMPMSGCTCLSTLKM*IL 425
EFMMDMAL+EMPMSGCTC TLKM*IL
Sbjct: 192 EFMMDMALEEMPMSGCTCFRTLKM*IL 112
>gb|BG410872.1|BG410872 EM1_27_A01.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 537
Score = 184 bits (396), Expect = 1e-045
Identities = 83/93 (89%), Positives = 83/93 (89%)
Frame = -2 / +2
Query: 439 SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFXXXXXXXXXXARYNKKPTITSR 260
SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIF ARYNKKPTITSR
Sbjct: 116 SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAAESAKLARYNKKPTITSR 295
Query: 259 EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS* 161
EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS*
Sbjct: 296 EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS* 394
Score = 87.7 bits (185), Expect(2) = 2e-030
Identities = 37/39 (94%), Positives = 39/39 (100%)
Frame = +3 / -1
Query: 162 *EDVNLVTALVPSDTACLASSPGRTRRTEVWISREVMVG 278
*E+VNLVTALVPS+TACLASSPGRTRRTEVWISREVMVG
Sbjct: 393 *EEVNLVTALVPSETACLASSPGRTRRTEVWISREVMVG 277
Score = 65.7 bits (137), Expect(2) = 2e-030
Identities = 27/27 (100%), Positives = 27/27 (100%)
Frame = +3 / -1
Query: 345 EFMMDMALDEMPMSGCTCLSTLKM*IL 425
EFMMDMALDEMPMSGCTCLSTLKM*IL
Sbjct: 210 EFMMDMALDEMPMSGCTCLSTLKM*IL 130
>gb|CF071535.1|CF071535 FE1_17_C03.b1_A002 Iron-deficient seedlings Sorghum bicolor cDNA
clone FE1_17_C03_A002 3', mRNA sequence
Length = 466
Score = 184 bits (396), Expect = 1e-045
Identities = 83/93 (89%), Positives = 83/93 (89%)
Frame = -2 / +2
Query: 439 SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFXXXXXXXXXXARYNKKPTITSR 260
SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIF ARYNKKPTITSR
Sbjct: 62 SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAAESAKLARYNKKPTITSR 241
Query: 259 EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS* 161
EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS*
Sbjct: 242 EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS* 340
Score = 87.7 bits (185), Expect(2) = 2e-030
Identities = 37/39 (94%), Positives = 39/39 (100%)
Frame = +3 / -2
Query: 162 *EDVNLVTALVPSDTACLASSPGRTRRTEVWISREVMVG 278
*E+VNLVTALVPS+TACLASSPGRTRRTEVWISREVMVG
Sbjct: 339 *EEVNLVTALVPSETACLASSPGRTRRTEVWISREVMVG 223
Score = 65.7 bits (137), Expect(2) = 2e-030
Identities = 27/27 (100%), Positives = 27/27 (100%)
Frame = +3 / -2
Query: 345 EFMMDMALDEMPMSGCTCLSTLKM*IL 425
EFMMDMALDEMPMSGCTCLSTLKM*IL
Sbjct: 156 EFMMDMALDEMPMSGCTCLSTLKM*IL 76
>gb|CW191309.1|CW191309 104_613_11178426_116_36942_075 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11178426, DNA
sequence
Length = 724
Score = 183 bits (395), Expect = 2e-045
Identities = 83/93 (89%), Positives = 83/93 (89%)
Frame = -2 / +1
Query: 439 SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFXXXXXXXXXXARYNKKPTITSR 260
SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIF ARYNKKPTITSR
Sbjct: 334 SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAGEAAKLARYNKKPTITSR 513
Query: 259 EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS* 161
EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS*
Sbjct: 514 EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS* 612
Score = 83.5 bits (176), Expect(2) = 1e-028
Identities = 35/39 (89%), Positives = 38/39 (97%)
Frame = +3 / -3
Query: 162 *EDVNLVTALVPSDTACLASSPGRTRRTEVWISREVMVG 278
*++VNLVTALVPSDTACLASSPGRTRRT+VWIS EVMVG
Sbjct: 611 *DEVNLVTALVPSDTACLASSPGRTRRTDVWISLEVMVG 495
Score = 63.8 bits (133), Expect(2) = 1e-028
Identities = 26/27 (96%), Positives = 27/27 (100%)
Frame = +3 / -3
Query: 345 EFMMDMALDEMPMSGCTCLSTLKM*IL 425
EFMMDMAL+EMPMSGCTCLSTLKM*IL
Sbjct: 428 EFMMDMALEEMPMSGCTCLSTLKM*IL 348
>gb|AI724175.1|AI724175 RHIZ1_8_A04.y2_A001 Rhizome1 (RHIZ1) Sorghum halepense cDNA, mRNA
sequence
Length = 509
Score = 183 bits (395), Expect = 2e-045
Identities = 83/93 (89%), Positives = 83/93 (89%)
Frame = -2 / +2
Query: 439 SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFXXXXXXXXXXARYNKKPTITSR 260
SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIF ARYNKKPTITSR
Sbjct: 113 SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAGEAAKLARYNKKPTITSR 292
Query: 259 EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS* 161
EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS*
Sbjct: 293 EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS* 391
Score = 83.5 bits (176), Expect(2) = 5e-028
Identities = 35/39 (89%), Positives = 38/39 (97%)
Frame = +3 / -3
Query: 162 *EDVNLVTALVPSDTACLASSPGRTRRTEVWISREVMVG 278
*++VNLVTALVPSDTACLASSPGRTRRT+VWIS EVMVG
Sbjct: 390 *DEVNLVTALVPSDTACLASSPGRTRRTDVWISLEVMVG 274
Score = 62.0 bits (129), Expect(2) = 5e-028
Identities = 25/27 (92%), Positives = 26/27 (96%)
Frame = +3 / -3
Query: 345 EFMMDMALDEMPMSGCTCLSTLKM*IL 425
EFMMDMAL+EMPMSGCTC STLKM*IL
Sbjct: 207 EFMMDMALEEMPMSGCTCFSTLKM*IL 127
>gb|BE592378.1|BE592378 WS1_94_A05.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 464
Score = 183 bits (395), Expect = 2e-045
Identities = 83/93 (89%), Positives = 83/93 (89%)
Frame = -2 / +2
Query: 439 SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFXXXXXXXXXXARYNKKPTITSR 260
SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIF ARYNKKPTITSR
Sbjct: 35 SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAGEAAKLARYNKKPTITSR 214
Query: 259 EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS* 161
EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS*
Sbjct: 215 EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS* 313
Score = 83.5 bits (176), Expect(2) = 1e-028
Identities = 35/39 (89%), Positives = 38/39 (97%)
Frame = +3 / -3
Query: 162 *EDVNLVTALVPSDTACLASSPGRTRRTEVWISREVMVG 278
*++VNLVTALVPSDTACLASSPGRTRRT+VWIS EVMVG
Sbjct: 312 *DEVNLVTALVPSDTACLASSPGRTRRTDVWISLEVMVG 196
Score = 63.8 bits (133), Expect(2) = 1e-028
Identities = 26/27 (96%), Positives = 27/27 (100%)
Frame = +3 / -3
Query: 345 EFMMDMALDEMPMSGCTCLSTLKM*IL 425
EFMMDMAL+EMPMSGCTCLSTLKM*IL
Sbjct: 129 EFMMDMALEEMPMSGCTCLSTLKM*IL 49
>gb|CW182557.1|CW182557 104_598_11164141_116_36663_061 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11164141, DNA
sequence
Length = 658
Score = 182 bits (393), Expect = 3e-045
Identities = 82/97 (84%), Positives = 84/97 (86%)
Frame = -2 / +3
Query: 439 SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFXXXXXXXXXXARYNKKPTITSR 260
SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIF ARYNKKPTITSR
Sbjct: 18 SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAGEAAKLARYNKKPTITSR 197
Query: 259 EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS*GAAA 149
EIQTSVRLVLPGELAKHAVSEGTKAVTKFTS+* +
Sbjct: 198 EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSN*ATCS 308
Score = 136 bits (292), Expect = 3e-031
Identities = 60/85 (70%), Positives = 62/85 (72%)
Frame = +3 / -1
Query: 171 VNLVTALVPSDTACLASSPGRTRRTEVWISREVMVGXXXXXXXXXXXXXXXXXXXXXXEF 350
VNLVTALVPS+TACLASSPGRTRRTEVWISREVMVG EF
Sbjct: 286 VNLVTALVPSETACLASSPGRTRRTEVWISREVMVGFLLYRASLAASPASFSKMSLMKEF 107
Query: 351 MMDMALDEMPMSGCTCLSTLKM*IL 425
MMDMAL+EMPMSGCTC STLKM*IL
Sbjct: 106 MMDMALEEMPMSGCTCFSTLKM*IL 32
>gb|AW564395.1|AW564395 LG1_292_F12.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 568
Score = 182 bits (393), Expect = 3e-045
Identities = 82/97 (84%), Positives = 84/97 (86%)
Frame = -2 / +2
Query: 439 SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFXXXXXXXXXXARYNKKPTITSR 260
SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIF ARYNKKPTITSR
Sbjct: 245 SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAGEAAKLARYNKKPTITSR 424
Query: 259 EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS*GAAA 149
EIQTSVRLVLPGELAKHAVSEGTKAVTKFTS+* +
Sbjct: 425 EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSN*ATCS 535
Score = 136 bits (292), Expect = 3e-031
Identities = 60/85 (70%), Positives = 62/85 (72%)
Frame = +3 / -2
Query: 171 VNLVTALVPSDTACLASSPGRTRRTEVWISREVMVGXXXXXXXXXXXXXXXXXXXXXXEF 350
VNLVTALVPS+TACLASSPGRTRRTEVWISREVMVG EF
Sbjct: 513 VNLVTALVPSETACLASSPGRTRRTEVWISREVMVGFLLYRASLAASPASFSKMSLMKEF 334
Query: 351 MMDMALDEMPMSGCTCLSTLKM*IL 425
MMDMAL+EMPMSGCTC STLKM*IL
Sbjct: 333 MMDMALEEMPMSGCTCFSTLKM*IL 259
>gb|BE593143.1|BE593143 WS1_98_A10.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 596
Score = 182 bits (393), Expect = 3e-045
Identities = 82/97 (84%), Positives = 84/97 (86%)
Frame = -2 / +2
Query: 439 SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFXXXXXXXXXXARYNKKPTITSR 260
SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIF ARYNKKPTITSR
Sbjct: 191 SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAGEAAKLARYNKKPTITSR 370
Query: 259 EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS*GAAA 149
EIQTSVRLVLPGELAKHAVSEGTKAVTKFTS+* +
Sbjct: 371 EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSN*ATCS 481
Score = 136 bits (292), Expect = 3e-031
Identities = 60/85 (70%), Positives = 62/85 (72%)
Frame = +3 / -3
Query: 171 VNLVTALVPSDTACLASSPGRTRRTEVWISREVMVGXXXXXXXXXXXXXXXXXXXXXXEF 350
VNLVTALVPS+TACLASSPGRTRRTEVWISREVMVG EF
Sbjct: 459 VNLVTALVPSETACLASSPGRTRRTEVWISREVMVGFLLYRASLAASPASFSKMSLMKEF 280
Query: 351 MMDMALDEMPMSGCTCLSTLKM*IL 425
MMDMAL+EMPMSGCTC STLKM*IL
Sbjct: 279 MMDMALEEMPMSGCTCFSTLKM*IL 205
>gb|BF481909.1|BF481909 FM1_22_H04.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 506
Score = 182 bits (393), Expect = 3e-045
Identities = 82/97 (84%), Positives = 84/97 (86%)
Frame = -2 / +2
Query: 439 SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFXXXXXXXXXXARYNKKPTITSR 260
SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIF ARYNKKPTITSR
Sbjct: 38 SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAGEAAKLARYNKKPTITSR 217
Query: 259 EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS*GAAA 149
EIQTSVRLVLPGELAKHAVSEGTKAVTKFTS+* +
Sbjct: 218 EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSN*ATCS 328
Score = 136 bits (292), Expect = 3e-031
Identities = 60/85 (70%), Positives = 62/85 (72%)
Frame = +3 / -3
Query: 171 VNLVTALVPSDTACLASSPGRTRRTEVWISREVMVGXXXXXXXXXXXXXXXXXXXXXXEF 350
VNLVTALVPS+TACLASSPGRTRRTEVWISREVMVG EF
Sbjct: 306 VNLVTALVPSETACLASSPGRTRRTEVWISREVMVGFLLYRASLAASPASFSKMSLMKEF 127
Query: 351 MMDMALDEMPMSGCTCLSTLKM*IL 425
MMDMAL+EMPMSGCTC STLKM*IL
Sbjct: 126 MMDMALEEMPMSGCTCFSTLKM*IL 52
>gb|BF656458.1|BF656458 FM1_50_B08.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 556
Score = 182 bits (393), Expect = 3e-045
Identities = 82/97 (84%), Positives = 84/97 (86%)
Frame = -2 / +2
Query: 439 SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFXXXXXXXXXXARYNKKPTITSR 260
SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIF ARYNKKPTITSR
Sbjct: 35 SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAGEAAKLARYNKKPTITSR 214
Query: 259 EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS*GAAA 149
EIQTSVRLVLPGELAKHAVSEGTKAVTKFTS+* +
Sbjct: 215 EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSN*ATCS 325
Score = 136 bits (292), Expect = 3e-031
Identities = 60/85 (70%), Positives = 62/85 (72%)
Frame = +3 / -2
Query: 171 VNLVTALVPSDTACLASSPGRTRRTEVWISREVMVGXXXXXXXXXXXXXXXXXXXXXXEF 350
VNLVTALVPS+TACLASSPGRTRRTEVWISREVMVG EF
Sbjct: 303 VNLVTALVPSETACLASSPGRTRRTEVWISREVMVGFLLYRASLAASPASFSKMSLMKEF 124
Query: 351 MMDMALDEMPMSGCTCLSTLKM*IL 425
MMDMAL+EMPMSGCTC STLKM*IL
Sbjct: 123 MMDMALEEMPMSGCTCFSTLKM*IL 49
>gb|BF704683.1|BF704683 FM1_50_B08.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 563
Score = 182 bits (393), Expect = 3e-045
Identities = 82/97 (84%), Positives = 84/97 (86%)
Frame = -2 / +1
Query: 439 SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFXXXXXXXXXXARYNKKPTITSR 260
SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIF ARYNKKPTITSR
Sbjct: 250 SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAGEAAKLARYNKKPTITSR 429
Query: 259 EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS*GAAA 149
EIQTSVRLVLPGELAKHAVSEGTKAVTKFTS+* +
Sbjct: 430 EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSN*ATCS 540
Score = 136 bits (292), Expect = 3e-031
Identities = 60/85 (70%), Positives = 62/85 (72%)
Frame = +3 / -1
Query: 171 VNLVTALVPSDTACLASSPGRTRRTEVWISREVMVGXXXXXXXXXXXXXXXXXXXXXXEF 350
VNLVTALVPS+TACLASSPGRTRRTEVWISREVMVG EF
Sbjct: 518 VNLVTALVPSETACLASSPGRTRRTEVWISREVMVGFLLYRASLAASPASFSKMSLMKEF 339
Query: 351 MMDMALDEMPMSGCTCLSTLKM*IL 425
MMDMAL+EMPMSGCTC STLKM*IL
Sbjct: 338 MMDMALEEMPMSGCTCFSTLKM*IL 264
>gb|CD213618.1|CD213618 HS1_52_G12.b1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_52_G12_A012 3', mRNA sequence
Length = 611
Score = 182 bits (393), Expect = 3e-045
Identities = 83/95 (87%), Positives = 83/95 (87%)
Frame = -2 / +2
Query: 439 SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFXXXXXXXXXXARYNKKPTITSR 260
SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIF ARYNKKPTITSR
Sbjct: 101 SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAAEAAKLARYNKKPTITSR 280
Query: 259 EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS*GA 155
EIQTSVRLVLPG LAKHAVSEGTKAVTKFTSS* A
Sbjct: 281 EIQTSVRLVLPGGLAKHAVSEGTKAVTKFTSS*AA 385
Score = 144 bits (308), Expect = 2e-033
Identities = 63/92 (68%), Positives = 67/92 (72%)
Frame = +3 / -3
Query: 156 AP*EDVNLVTALVPSDTACLASSPGRTRRTEVWISREVMVGXXXXXXXXXXXXXXXXXXX 335
A *++VNLVTALVPS+TACLAS PGRTRRTEVWISREVMVG
Sbjct: 384 AA*DEVNLVTALVPSETACLASPPGRTRRTEVWISREVMVGFLLYRASLAASAASFSKMS 205
Query: 336 XXXEFMMDMALDEMPMSGCTCLSTLKM*ILYV 431
EFMMDMAL+EMPMSGCTC STLKM*ILYV
Sbjct: 204 LMKEFMMDMALEEMPMSGCTCFSTLKM*ILYV 109
>gb|CD213713.1|CD213713 HS1_52_G12.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_52_G12_A012 5', mRNA sequence
Length = 729
Score = 182 bits (393), Expect = 3e-045
Identities = 83/95 (87%), Positives = 83/95 (87%)
Frame = -2 / +2
Query: 439 SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFXXXXXXXXXXARYNKKPTITSR 260
SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIF ARYNKKPTITSR
Sbjct: 260 SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAAEAAKLARYNKKPTITSR 439
Query: 259 EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS*GA 155
EIQTSVRLVLPG LAKHAVSEGTKAVTKFTSS* A
Sbjct: 440 EIQTSVRLVLPGGLAKHAVSEGTKAVTKFTSS*AA 544
Score = 144 bits (308), Expect = 2e-033
Identities = 63/92 (68%), Positives = 67/92 (72%)
Frame = +3 / -1
Query: 156 AP*EDVNLVTALVPSDTACLASSPGRTRRTEVWISREVMVGXXXXXXXXXXXXXXXXXXX 335
A *++VNLVTALVPS+TACLAS PGRTRRTEVWISREVMVG
Sbjct: 543 AA*DEVNLVTALVPSETACLASPPGRTRRTEVWISREVMVGFLLYRASLAASAASFSKMS 364
Query: 336 XXXEFMMDMALDEMPMSGCTCLSTLKM*ILYV 431
EFMMDMAL+EMPMSGCTC STLKM*ILYV
Sbjct: 363 LMKEFMMDMALEEMPMSGCTCFSTLKM*ILYV 268
>gb|CD431873.1|CD431873 ETH1_11_A02.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_11_A02_A002 5', mRNA sequence
Length = 667
Score = 182 bits (393), Expect = 3e-045
Identities = 82/97 (84%), Positives = 84/97 (86%)
Frame = -2 / +2
Query: 439 SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFXXXXXXXXXXARYNKKPTITSR 260
SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIF ARYNKKPTITSR
Sbjct: 269 SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAGEAAKLARYNKKPTITSR 448
Query: 259 EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS*GAAA 149
EIQTSVRLVLPGELAKHAVSEGTKAVTKFTS+* +
Sbjct: 449 EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSN*ATCS 559
Score = 136 bits (292), Expect = 3e-031
Identities = 60/85 (70%), Positives = 62/85 (72%)
Frame = +3 / -2
Query: 171 VNLVTALVPSDTACLASSPGRTRRTEVWISREVMVGXXXXXXXXXXXXXXXXXXXXXXEF 350
VNLVTALVPS+TACLASSPGRTRRTEVWISREVMVG EF
Sbjct: 537 VNLVTALVPSETACLASSPGRTRRTEVWISREVMVGFLLYRASLAASPASFSKMSLMKEF 358
Query: 351 MMDMALDEMPMSGCTCLSTLKM*IL 425
MMDMAL+EMPMSGCTC STLKM*IL
Sbjct: 357 MMDMALEEMPMSGCTCFSTLKM*IL 283
>gb|CN150853.1|CN150853 WOUND1_71_G11.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_71_G11_A002 5', mRNA sequence
Length = 765
Score = 182 bits (393), Expect = 3e-045
Identities = 82/97 (84%), Positives = 84/97 (86%)
Frame = -2 / +2
Query: 439 SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFXXXXXXXXXXARYNKKPTITSR 260
SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIF ARYNKKPTITSR
Sbjct: 251 SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAGEAAKLARYNKKPTITSR 430
Query: 259 EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS*GAAA 149
EIQTSVRLVLPGELAKHAVSEGTKAVTKFTS+* +
Sbjct: 431 EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSN*ATCS 541
Score = 136 bits (292), Expect = 3e-031
Identities = 60/85 (70%), Positives = 62/85 (72%)
Frame = +3 / -1
Query: 171 VNLVTALVPSDTACLASSPGRTRRTEVWISREVMVGXXXXXXXXXXXXXXXXXXXXXXEF 350
VNLVTALVPS+TACLASSPGRTRRTEVWISREVMVG EF
Sbjct: 519 VNLVTALVPSETACLASSPGRTRRTEVWISREVMVGFLLYRASLAASPASFSKMSLMKEF 340
Query: 351 MMDMALDEMPMSGCTCLSTLKM*IL 425
MMDMAL+EMPMSGCTC STLKM*IL
Sbjct: 339 MMDMALEEMPMSGCTCFSTLKM*IL 265
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 462,556,584
Number of Sequences: 832831
Number of extensions: 4362725
Number of successful extensions: 47253
Number of sequences better than 1.0e-020: 102
length of database: 163,786,556
effective HSP length: 54
effective length of database: 118,813,682
effective search space used: 20198325940
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)