TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QCM14d12.yg.2.1
(593 letters)
Database: Populus_nucl_with_EST.fasta
369,679 sequences; 203,408,664 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AY162180.1| Populus tremuloides cellulose synthase (CesA... 366 e-101
gb|AY573572.1| Populus tremula x Populus tremuloides cellul... 363 e-100
gb|AY573575.1| Populus tremula x Populus tremuloides cellul... 361 3e-099
gb|AY196961.1| Populus tremuloides cellulose synthase 6 (Ce... 352 1e-096
gb|AY573574.1| Populus tremula x Populus tremuloides cellul... 350 5e-096
gb|AY573573.2| Populus tremula x Populus tremuloides cellul... 348 2e-095
gb|AF527387.1| Populus tremuloides xylem-specific cellulose... 347 4e-095
gb|AY573571.1| Populus tremula x Populus tremuloides cellul... 347 4e-095
gb|AF081534.1|AF081534 Populus x canescens cellulose syntha... 345 1e-094
gb|AY055724.2| Populus tremuloides cellulose synthase (CesA... 336 7e-092
gb|AY095297.1| Populus tremuloides cellulose synthase (CesA... 336 1e-091
gb|AY162181.1| Populus tremuloides cellulose synthase (CesA... 334 3e-091
gb|AF072131.1|AF072131 Populus tremuloides secondary xylem ... 259 2e-087
gb|DQ004570.1| Populus tomentosa cellulose synthase (cesa1)... 259 2e-087
gb|BU823358.1|BU823358 UB51DPD11 Populus tremula cambium cD... 309 7e-084
gb|AJ778214.1|AJ778214 AJ778214 Populus euphratica root 3-6... 309 7e-084
gb|AJ779945.1|AJ779945 AJ779945 Populus euphratica root 3-6... 308 2e-083
gb|AJ779545.1|AJ779545 AJ779545 Populus euphratica root 3-6... 301 2e-081
gb|CK318831.1|CK318831 X9P03h01 Populus stem seasonal libra... 238 2e-064
gb|CK107258.1|CK107258 UB51DPD11.5pR Populus active cambium... 177 3e-063
gb|CF229078.1|CF229078 PtaXM0021A1A0101 Poplar cDNA library... 232 4e-062
gb|AY162184.1| Populus tremuloides cellulose synthase-like ... 171 4e-059
gb|DT473511.1|DT473511 WS01229.BR_N17 PT-GT-FL-A-3 Populus ... 183 6e-046
gb|CK101560.1|CK101560 F099P76.5pR Populus flower cDNA libr... 181 4e-045
gb|CF235713.1|CF235713 PtaJXT0026B7B0703 Poplar cDNA librar... 175 2e-043
gb|CK091431.1|CK091431 F099P76.3pR Populus flower cDNA libr... 166 1e-040
gb|BI130668.1|BI130668 G109P08Y Populus cambium cDNA librar... 163 7e-040
gb|BI138150.1|BI138150 F099P76Y Populus flower cDNA library... 157 6e-038
gb|CF236447.1|CF236447 PtaJXT2H2H0216 Poplar cDNA library f... 139 1e-032
gb|CA931952.1|CA931952 MTU4TA.P25.A10 Aspen apex cDNA Libra... 123 1e-027
gb|CV228438.1|CV228438 WS01910.B21_B15 PT-DX-N-A-10 Populus... 120 9e-027
gb|DT505698.1|DT505698 WS01811.C21_J23 PTxD-IL-N-A-9 Populu... 92 2e-026
gb|CA926289.1|CA926289 MTU6CR.P13.C05 Aspen root cDNA Libra... 117 6e-026
gb|DT477686.1|DT477686 WS02520.BR_K21 PT-MB-N-A-15 Populus ... 112 2e-024
gb|DT482749.1|DT482749 WS02520.B21_K21 PT-MB-N-A-15 Populus... 112 2e-024
gb|DT507488.1|DT507488 WS02418.BR_G10 PTxD-ICC-N-A-14 Popul... 101 3e-021
gb|DT512116.1|DT512116 WS02418.B21_G10 PTxD-ICC-N-A-14 Popu... 101 3e-021
>gb|AY162180.1| Populus tremuloides cellulose synthase (CesA7) mRNA, complete cds
Length = 3809
Score = 366 bits (793), Expect = e-101
Identities = 147/197 (74%), Positives = 165/197 (83%)
Frame = -1 / +3
Query: 593 TVDPMXEPPLIIAXTVLSILAVXYPVDKVCCYVSDDGAAMLTFEALTETCLFARKWVPFC 414
TVDPM EPPLI A TVLSILAV YPVDKV CYVSDDGAAMLTFEAL+ET FARKWVPFC
Sbjct: 1290 TVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEALSETSEFARKWVPFC 1469
Query: 413 KKHKIEPRAPEWYFAQKIDYLREKVHPEFVRERRAMKREYEEFKVHINTVAANSRKVPEG 234
KK IEPRAPEWYF+QKIDYL+ KVHP FVRERRAMKREYEEFKV IN + + ++KVPE
Sbjct: 1470 KKFNIEPRAPEWYFSQKIDYLKNKVHPAFVRERRAMKREYEEFKVRINGLVSTAQKVPED 1649
Query: 233 GWSLPEGAPWHGNNVRDHAGMVQVITGNDCVMDDAGNKLPWLVYVSREKRPGHDHHKKAG 54
GW++ +G PW GNNVRDH GM+QV G V D G +LP LVYVSREKRPG +HHKKAG
Sbjct: 1650 GWTMQDGTPWPGNNVRDHPGMIQVFLGQSGVRDVEGCELPRLVYVSREKRPGFEHHKKAG 1829
Query: 53 ALNALLRTSAILSNAPF 3
A+N+L+R SA+LSNAP+
Sbjct: 1830 AMNSLMRVSAVLSNAPY 1880
Score = 204 bits (441), Expect = 3e-052
Identities = 101/184 (54%), Positives = 117/184 (63%)
Frame = +1 / -2
Query: 7 GALERIAEVRSNAFKAPAFL**SCPGLFSRET*TNQGSLFPASSMTQSLPVMTWTIPAWS 186
GA +R AE R + F APAFL S PGLFSRET*T +G+ P++S T P T +P WS
Sbjct: 1876 GAFDRTAETRISEFMAPAFLWCSNPGLFSRET*TRRGNSHPSTSRTPL*PRKT*IMPGWS 1697
Query: 187 RTLFPCHGAPSGRDHPPSGTLRELAATVFM*TLNSSYSLFIARRSRTNSG*TFSLR*SIF 366
RTLFP HG PS P SGT + F+ TLNSSYSLF+AR S TN+G*T +*SIF
Sbjct: 1696 RTLFPGHGVPSCIVQPSSGTFCAVETNPFILTLNSSYSLFMARLSLTNAG*TLFFK*SIF 1517
Query: 367 *AKYHSGARGSILCFLQKGTHFRANRHXXXXXXXXXXXXXXXDT*QQTLSTG*XTASMDK 546
* KYHSGARGS+L FLQ GTHF AN DT* TLSTG* TA +++
Sbjct: 1516 *EKYHSGARGSMLNFLQNGTHFLANSDVSERASNVSMAAPSSDT*HATLSTG*STARIER 1337
Query: 547 TVXA 558
TV A
Sbjct: 1336 TVFA 1325
Score = 82.2 bits (173), Expect(2) = 7e-021
Identities = 37/83 (44%), Positives = 47/83 (56%)
Frame = +3 / -1
Query: 180 MVSNIISMPWSSFW*GPSSLGNFA*ISSYCVYVNLKFFVFSLHCTSFSNKLWVNLFS*IV 359
MVS I+S PWSS P+ N + +Y + +FF+FSLH T F +K W+N IV
Sbjct: 1703 MVSYIVSRPWSSILHCPTIFRNLLCCGNQPIYPHFEFFIFSLHGTPFPDKCWMNFIFQIV 1524
Query: 360 NFLSKIPFRSPRLDFVFLTEGNP 428
N L KIP R LD FL + NP
Sbjct: 1523 NLLRKIPLRGTGLDVKFLAKWNP 1455
Score = 37.7 bits (76), Expect(2) = 7e-021
Identities = 17/36 (47%), Positives = 22/36 (61%)
Frame = +3 / -1
Query: 486 IIRHIAANFINRIXXSXYGQNCVCNN*RRLXHWINC 593
I+ HIA NFI+RI +N V ++ RR H INC
Sbjct: 1397 IV*HIACNFIHRIINRENRENSVRSDQRRFFHRINC 1290
>gb|AY573572.1| Populus tremula x Populus tremuloides cellulose synthase (CesA2)
mRNA, complete cds
Length = 3991
Score = 363 bits (787), Expect = e-100
Identities = 143/197 (72%), Positives = 168/197 (85%)
Frame = -1 / +2
Query: 593 TVDPMXEPPLIIAXTVLSILAVXYPVDKVCCYVSDDGAAMLTFEALTETCLFARKWVPFC 414
TVDPM EPPLI A TVLSILAV YPV+KV CYVSDDGAAMLTFEA++ET FARKWVPFC
Sbjct: 1571 TVDPMKEPPLITANTVLSILAVDYPVEKVACYVSDDGAAMLTFEAISETSEFARKWVPFC 1750
Query: 413 KKHKIEPRAPEWYFAQKIDYLREKVHPEFVRERRAMKREYEEFKVHINTVAANSRKVPEG 234
K+ IEPRAPEWYFAQK+DYL+++V P F+RERRAMKREYEEFKV IN + A ++KVPE
Sbjct: 1751 KRFSIEPRAPEWYFAQKVDYLKDRVDPAFIRERRAMKREYEEFKVRINGLVATAQKVPED 1930
Query: 233 GWSLPEGAPWHGNNVRDHAGMVQVITGNDCVMDDAGNKLPWLVYVSREKRPGHDHHKKAG 54
GW++ +G PW GNNVRDH GM+QV G++ V D GN+LP LVYVSREKRPG DHHKKAG
Sbjct: 1931 GWTMQDGTPWPGNNVRDHPGMIQVFLGHNGVHDVEGNELPRLVYVSREKRPGFDHHKKAG 2110
Query: 53 ALNALLRTSAILSNAPF 3
A+N+L+R SAI++NAP+
Sbjct: 2111 AMNSLVRVSAIITNAPY 2161
Score = 197 bits (425), Expect = 5e-050
Identities = 102/184 (55%), Positives = 115/184 (62%)
Frame = +1 / -2
Query: 7 GALERIAEVRSNAFKAPAFL**SCPGLFSRET*TNQGSLFPASSMTQSLPVMTWTIPAWS 186
GA IAE + F APAFL *S PGLFSR+T*T +G+ FP++S T P T IP S
Sbjct: 2157 GAFVMIAETLTKEFIAPAFLW*SNPGLFSRDT*TRRGNSFPSTS*TPL*PRKT*IIPG*S 1978
Query: 187 RTLFPCHGAPSGRDHPPSGTLRELAATVFM*TLNSSYSLFIARRSRTNSG*TFSLR*SIF 366
TLFP HG PS P SGT +A F+ TLNSSYSLF+ARRS N+G T S +*S F
Sbjct: 1977 LTLFPGHGVPSCIVQPSSGTFCAVATNPFIRTLNSSYSLFMARRSLINAGSTLSFK*STF 1798
Query: 367 *AKYHSGARGSILCFLQKGTHFRANRHXXXXXXXXXXXXXXXDT*QQTLSTG*XTASMDK 546
*AKYHSGARGS+L LQKGTHF AN +T* T STG* TA MDK
Sbjct: 1797 *AKYHSGARGSMLNLLQKGTHFLANSDVSEIASKVSMAAPSSET*HATFSTG*STARMDK 1618
Query: 547 TVXA 558
TV A
Sbjct: 1617 TVFA 1606
Score = 110 bits (235), Expect = 7e-024
Identities = 60/146 (41%), Positives = 78/146 (53%)
Frame = -3 / +1
Query: 591 S*SNXXASFNYCXHSFVHTXCXXXXXXXXXXCVG*WCCNAYF*STYRNMSICTKMGSLL* 412
S*S S +C HS VH C C+ *WCC+AYF*S ++ IC K+G L
Sbjct: 1573 S*SYERTSTYHCKHSLVHPCCRLSSRKSCMLCLR*WCCHAYF*SYL*DI*ICKKVGPFLQ 1752
Query: 411 ETQNRASGS*MVFCSEN*LSKRKGSPRVCSRTTCNEERIRRI*GSHKHSSC*FTQSSRGR 232
E Q+ S S MVFCSE *L +R+ + T+C+EER+ R+ S+K SC T+ S G
Sbjct: 1753 EVQH*TSSSRMVFCSEG*LFERQSRSSIYQGTSCHEERV*RVQSSNKWVSCHGTEGS*GW 1932
Query: 231 MVPTRRSSMAWK*CSRPCRNGPGHHW 154
+ SMA +*C R N G W
Sbjct: 1933 LDNAGWHSMARE*CQRSSWNDSGLPW 2010
>gb|AY573575.1| Populus tremula x Populus tremuloides cellulose synthase (CesA4)
mRNA, complete cds
Length = 3778
Score = 361 bits (782), Expect = 3e-099
Identities = 146/197 (74%), Positives = 163/197 (82%)
Frame = -1 / +1
Query: 593 TVDPMXEPPLIIAXTVLSILAVXYPVDKVCCYVSDDGAAMLTFEALTETCLFARKWVPFC 414
TVDPM EPPLI A TVLSILAV YPVDKV CYVSDDGAAMLTFEAL+ET FARKWVPFC
Sbjct: 1324 TVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEALSETSEFARKWVPFC 1503
Query: 413 KKHKIEPRAPEWYFAQKIDYLREKVHPEFVRERRAMKREYEEFKVHINTVAANSRKVPEG 234
KK IEPRAPEWYF+QKIDYL+ KVHP FVRERRAMKREYEEFKV IN + + ++KVPE
Sbjct: 1504 KKFNIEPRAPEWYFSQKIDYLKNKVHPAFVRERRAMKREYEEFKVRINGLVSTAQKVPED 1683
Query: 233 GWSLPEGAPWHGNNVRDHAGMVQVITGNDCVMDDAGNKLPWLVYVSREKRPGHDHHKKAG 54
GW++ +G PW GNNVRDH GM+QV G V D G +LP LVYVSREKR G HHKKAG
Sbjct: 1684 GWTMQDGTPWPGNNVRDHPGMIQVFLGQSGVRDVEGCELPRLVYVSREKRQGSTHHKKAG 1863
Query: 53 ALNALLRTSAILSNAPF 3
A+N+L+R SA+LSNAP+
Sbjct: 1864 AMNSLMRVSAVLSNAPY 1914
Score = 203 bits (438), Expect = 7e-052
Identities = 100/184 (54%), Positives = 115/184 (62%)
Frame = +1 / -3
Query: 7 GALERIAEVRSNAFKAPAFL**SCPGLFSRET*TNQGSLFPASSMTQSLPVMTWTIPAWS 186
GA +R AE R + F APAFL P LFSRET*T +G+ P++S T P TW +P WS
Sbjct: 1910 GAFDRTAETRISEFMAPAFLWCVEPCLFSRET*TRRGNSHPSTSRTPL*PRKTWIMPGWS 1731
Query: 187 RTLFPCHGAPSGRDHPPSGTLRELAATVFM*TLNSSYSLFIARRSRTNSG*TFSLR*SIF 366
RTLFP HG PS P SGT + F+ TLNSSYSLF+AR S TN+G*T +*SIF
Sbjct: 1730 RTLFPGHGVPSCIVQPSSGTFCAVETNPFILTLNSSYSLFMARLSLTNAG*TLFFK*SIF 1551
Query: 367 *AKYHSGARGSILCFLQKGTHFRANRHXXXXXXXXXXXXXXXDT*QQTLSTG*XTASMDK 546
* KYHSGARGS+L FLQ GTHF AN DT* TLSTG* TA ++
Sbjct: 1550 *EKYHSGARGSMLNFLQNGTHFLANSDVSERASNVSMAAPSSDT*HATLSTG*STARIES 1371
Query: 547 TVXA 558
TV A
Sbjct: 1370 TVFA 1359
>gb|AY196961.1| Populus tremuloides cellulose synthase 6 (CesA6) mRNA, complete cds
Length = 3773
Score = 352 bits (762), Expect = 1e-096
Identities = 140/197 (71%), Positives = 163/197 (82%)
Frame = -1 / +2
Query: 593 TVDPMXEPPLIIAXTVLSILAVXYPVDKVCCYVSDDGAAMLTFEALTETCLFARKWVPFC 414
TVDP+ EPPL+ A TVLSILAV YPVDKV CYVSDDGAAMLTFEAL+ET FA+KWVPFC
Sbjct: 1151 TVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFEALSETSEFAKKWVPFC 1330
Query: 413 KKHKIEPRAPEWYFAQKIDYLREKVHPEFVRERRAMKREYEEFKVHINTVAANSRKVPEG 234
KK IEPRAPE+YF+QKIDYL++KV FV+ERRAMKREYEEFK+ IN + A + KVPE
Sbjct: 1331 KKFSIEPRAPEFYFSQKIDYLKDKVQASFVKERRAMKREYEEFKIRINALVAKAHKVPED 1510
Query: 233 GWSLPEGAPWHGNNVRDHAGMVQVITGNDCVMDDAGNKLPWLVYVSREKRPGHDHHKKAG 54
GW++ +G PW GNNVRDH GM+QV G D GN+LP LVYVSREKRPG +HHKKAG
Sbjct: 1511 GWTMQDGTPWPGNNVRDHPGMIQVFLGQSGGHDTDGNELPRLVYVSREKRPGFNHHKKAG 1690
Query: 53 ALNALLRTSAILSNAPF 3
A+NAL+R SA+L+NAP+
Sbjct: 1691 AMNALVRVSAVLTNAPY 1741
Score = 186 bits (400), Expect = 1e-046
Identities = 100/184 (54%), Positives = 110/184 (59%)
Frame = +1 / -3
Query: 7 GALERIAEVRSNAFKAPAFL**SCPGLFSRET*TNQGSLFPASSMTQSLPVMTWTIPAWS 186
GA AE + AF APAFL * PGLFS ET T +G+ FP+ S P T IP S
Sbjct: 1737 GAFVSTAETLTKAFIAPAFLW*LNPGLFSLETYTRRGNSFPSVSCPPLWPRKT*IIPG*S 1558
Query: 187 RTLFPCHGAPSGRDHPPSGTLRELAATVFM*TLNSSYSLFIARRSRTNSG*TFSLR*SIF 366
RTLFP HG PS HP SGTL LA + LNSSYSLFIA RS TN T S R*SIF
Sbjct: 1557 RTLFPGHGVPSCIVHPSSGTL*ALATKALIRILNSSYSLFIALRSLTNEACTLSFR*SIF 1378
Query: 367 *AKYHSGARGSILCFLQKGTHFRANRHXXXXXXXXXXXXXXXDT*QQTLSTG*XTASMDK 546
* K +SGARGS+L FLQ GTHF AN +T* +TLSTG* TA MD+
Sbjct: 1377 *EK*NSGARGSMLNFLQNGTHFFANSDVSDNASNVSIAAPSSET*HETLSTG*STARMDR 1198
Query: 547 TVXA 558
TV A
Sbjct: 1197 TVFA 1186
>gb|AY573574.1| Populus tremula x Populus tremuloides cellulose synthase (CesA3-2)
mRNA, complete cds
Length = 3358
Score = 350 bits (758), Expect = 5e-096
Identities = 137/197 (69%), Positives = 163/197 (82%)
Frame = -1 / +1
Query: 593 TVDPMXEPPLIIAXTVLSILAVXYPVDKVCCYVSDDGAAMLTFEALTETCLFARKWVPFC 414
TVDP+ +PPLI A TVLSILAV YPVDKV CYVSDDGAAML+FE+L ET FARKWVPFC
Sbjct: 904 TVDPLKDPPLITANTVLSILAVDYPVDKVSCYVSDDGAAMLSFESLVETAEFARKWVPFC 1083
Query: 413 KKHKIEPRAPEWYFAQKIDYLREKVHPEFVRERRAMKREYEEFKVHINTVAANSRKVPEG 234
KK+ IEPRAPE+YF+QKIDYL++KV P FV+ERRAMKR+YEE+KV +N + A ++K PE
Sbjct: 1084 KKYSIEPRAPEFYFSQKIDYLKDKVQPSFVKERRAMKRDYEEYKVRVNALVAKAQKTPEE 1263
Query: 233 GWSLPEGAPWHGNNVRDHAGMVQVITGNDCVMDDAGNKLPWLVYVSREKRPGHDHHKKAG 54
GW++ +G PW GNN RDH GM+QV GN D GN+LP LVYVSREKRPG+ HHKKAG
Sbjct: 1264 GWTMQDGTPWPGNNTRDHPGMIQVFLGNTGARDIEGNELPRLVYVSREKRPGYQHHKKAG 1443
Query: 53 ALNALLRTSAILSNAPF 3
A NAL+R SA+L+NAP+
Sbjct: 1444 AENALVRVSAVLTNAPY 1494
Score = 164 bits (353), Expect = 4e-040
Identities = 92/184 (50%), Positives = 102/184 (55%)
Frame = +1 / -3
Query: 7 GALERIAEVRSNAFKAPAFL**SCPGLFSRET*TNQGSLFPASSMTQSLPVMTWTIPAWS 186
GA R A+ + AF APAFL PGLFS ET T +GS FP+ S P T +P S
Sbjct: 1490 GAFVRTADTLTRAFSAPAFLWCW*PGLFSLETYTRRGSSFPSMSRAPVFPRKT*IMPG*S 1311
Query: 187 RTLFPCHGAPSGRDHPPSGTLRELAATVFM*TLNSSYSLFIARRSRTNSG*TFSLR*SIF 366
R LFP G PS HP SG A TL SS SLFIA RS T G*T S +*SIF
Sbjct: 1310 RVLFPGQGVPSCIVHPSSGVF*AFATRALTRTLYSS*SLFIALRSFTKEG*TLSFK*SIF 1131
Query: 367 *AKYHSGARGSILCFLQKGTHFRANRHXXXXXXXXXXXXXXXDT*QQTLSTG*XTASMDK 546
K +SGA GSI FLQ GTHF AN DT*Q+TLSTG* TA M++
Sbjct: 1130 CEK*NSGALGSIEYFLQNGTHFLANSAVSTRDSNESIAAPSSDT*QETLSTG*STARMER 951
Query: 547 TVXA 558
TV A
Sbjct: 950 TVLA 939
>gb|AY573573.2| Populus tremula x Populus tremuloides cellulose synthase (CesA3-1)
mRNA, complete cds
Length = 3250
Score = 348 bits (754), Expect = 2e-095
Identities = 137/197 (69%), Positives = 161/197 (81%)
Frame = -1 / +2
Query: 593 TVDPMXEPPLIIAXTVLSILAVXYPVDKVCCYVSDDGAAMLTFEALTETCLFARKWVPFC 414
TVDP+ EPPLI A TVLSILAV YPVDKV CYVSDDGAAMLTFE+L ET FARKWVPFC
Sbjct: 821 TVDPLKEPPLITANTVLSILAVDYPVDKVSCYVSDDGAAMLTFESLVETAEFARKWVPFC 1000
Query: 413 KKHKIEPRAPEWYFAQKIDYLREKVHPEFVRERRAMKREYEEFKVHINTVAANSRKVPEG 234
KK IEPRAPE+YF+QKIDYL++KV P FV+ERRAMKR+YEE+KV +N + ++K P+
Sbjct: 1001 KKFSIEPRAPEFYFSQKIDYLKDKVQPSFVKERRAMKRDYEEYKVRVNALVPKAQKTPDE 1180
Query: 233 GWSLPEGAPWHGNNVRDHAGMVQVITGNDCVMDDAGNKLPWLVYVSREKRPGHDHHKKAG 54
GW++ +G PW GNN RDH GM+QV GN D GN+LP LVYVSREKRPG+ HHKKAG
Sbjct: 1181 GWTMQDGTPWPGNNTRDHPGMIQVFLGNTGARDIEGNELPRLVYVSREKRPGYQHHKKAG 1360
Query: 53 ALNALLRTSAILSNAPF 3
A NAL+R SA+L+NAP+
Sbjct: 1361 AENALVRVSAVLTNAPY 1411
Score = 162 bits (349), Expect = 1e-039
Identities = 91/184 (49%), Positives = 102/184 (55%)
Frame = +1 / -2
Query: 7 GALERIAEVRSNAFKAPAFL**SCPGLFSRET*TNQGSLFPASSMTQSLPVMTWTIPAWS 186
GA R A+ + AF APAFL PGLFS ET T++GS FP+ S P T +P S
Sbjct: 1407 GAFVRTADTLTRAFSAPAFLWCW*PGLFSLETYTSRGSSFPSMSRAPVFPRNT*IMPG*S 1228
Query: 187 RTLFPCHGAPSGRDHPPSGTLRELAATVFM*TLNSSYSLFIARRSRTNSG*TFSLR*SIF 366
R LFP G PS HP SG TL SS SLFIA RS T G*T S +*SIF
Sbjct: 1227 RVLFPGQGVPSCIVHPSSGVFCAFGTRALTRTLYSS*SLFIALRSFTKEG*TLSFK*SIF 1048
Query: 367 *AKYHSGARGSILCFLQKGTHFRANRHXXXXXXXXXXXXXXXDT*QQTLSTG*XTASMDK 546
K +SGA GSI FLQ GTHF AN DT*Q+TLSTG* TA M++
Sbjct: 1047 CEK*NSGALGSIENFLQNGTHFLANSAVSTRDSNVSIAAPSSDT*QETLSTG*STARMER 868
Query: 547 TVXA 558
TV A
Sbjct: 867 TVLA 856
>gb|AF527387.1| Populus tremuloides xylem-specific cellulose synthase (CesA3) mRNA,
complete cds
Length = 3401
Score = 347 bits (752), Expect = 4e-095
Identities = 135/197 (68%), Positives = 163/197 (82%)
Frame = -1 / +3
Query: 593 TVDPMXEPPLIIAXTVLSILAVXYPVDKVCCYVSDDGAAMLTFEALTETCLFARKWVPFC 414
TVDP+ EPP+I A TVLSIL+V YPVDKV CYVSDDGA+ML F++L ET FAR+WVPFC
Sbjct: 957 TVDPLKEPPIITANTVLSILSVDYPVDKVSCYVSDDGASMLLFDSLAETAEFARRWVPFC 1136
Query: 413 KKHKIEPRAPEWYFAQKIDYLREKVHPEFVRERRAMKREYEEFKVHINTVAANSRKVPEG 234
KKH IEPRAPE+YF QKIDYL++KVHP FV+ERRAMKREYEEFKV IN + + ++K PE
Sbjct: 1137 KKHNIEPRAPEFYFTQKIDYLKDKVHPNFVKERRAMKREYEEFKVRINALVSKAQKKPEE 1316
Query: 233 GWSLPEGAPWHGNNVRDHAGMVQVITGNDCVMDDAGNKLPWLVYVSREKRPGHDHHKKAG 54
GW + +G PW GN RDH GM+QV G++ +D G +LP LVYVSREKRPG++HHKKAG
Sbjct: 1317 GWVMQDGTPWPGNITRDHPGMIQVYLGSEGALDVEGKELPRLVYVSREKRPGYNHHKKAG 1496
Query: 53 ALNALLRTSAILSNAPF 3
A+NAL+R SA+L+NAPF
Sbjct: 1497 AMNALIRVSAVLTNAPF 1547
Score = 181 bits (389), Expect = 4e-045
Identities = 96/185 (51%), Positives = 107/185 (57%)
Frame = +1 / -2
Query: 4 KGALERIAEVRSNAFKAPAFL**SCPGLFSRET*TNQGSLFPASSMTQSLPVMTWTIPAW 183
KGAL AE R AF APAFL PG FSRET T+ GS P++S SLP T IP
Sbjct: 1546 KGALVSTAETRIRAFMAPAFLWWLYPGRFSRETYTSLGSSLPSTSSAPSLPRYT*IIPG* 1367
Query: 184 SRTLFPCHGAPSGRDHPPSGTLRELAATVFM*TLNSSYSLFIARRSRTNSG*TFSLR*SI 363
SR +FP HG PS HP SG + TLNSSYSLFIA RS T G T S +*SI
Sbjct: 1366 SRVMFPGHGVPSCITHPSSGFFWAFDTNALILTLNSSYSLFIALRSFTKLGCTLSFK*SI 1187
Query: 364 F*AKYHSGARGSILCFLQKGTHFRANRHXXXXXXXXXXXXXXXDT*QQTLSTG*XTASMD 543
F* K +SGA GS+LCFLQ GTH AN DT*Q TLSTG* T ++
Sbjct: 1186 F*VK*NSGALGSMLCFLQNGTHLLANSAVSARESKRSMDAPSSDT*QLTLSTG*STDRIE 1007
Query: 544 KTVXA 558
+TV A
Sbjct: 1006 RTVFA 992
>gb|AY573571.1| Populus tremula x Populus tremuloides cellulose synthase (CesA1)
mRNA, complete cds
Length = 3472
Score = 347 bits (752), Expect = 4e-095
Identities = 135/197 (68%), Positives = 163/197 (82%)
Frame = -1 / +3
Query: 593 TVDPMXEPPLIIAXTVLSILAVXYPVDKVCCYVSDDGAAMLTFEALTETCLFARKWVPFC 414
TVDP+ EPP+I A TVLSIL+V YPVDKV CYVSDDGA+ML F++L ET FAR+WVPFC
Sbjct: 1029 TVDPLKEPPIITANTVLSILSVDYPVDKVSCYVSDDGASMLLFDSLAETAEFARRWVPFC 1208
Query: 413 KKHKIEPRAPEWYFAQKIDYLREKVHPEFVRERRAMKREYEEFKVHINTVAANSRKVPEG 234
KKH IEPRAPE+YF QKIDYL++KVHP FV+ERRAMKREYEEFKV IN + + ++K PE
Sbjct: 1209 KKHNIEPRAPEFYFTQKIDYLKDKVHPNFVKERRAMKREYEEFKVRINALVSKAQKKPEE 1388
Query: 233 GWSLPEGAPWHGNNVRDHAGMVQVITGNDCVMDDAGNKLPWLVYVSREKRPGHDHHKKAG 54
GW + +G PW GN RDH GM+QV G++ +D G +LP LVYVSREKRPG++HHKKAG
Sbjct: 1389 GWVMQDGTPWPGNITRDHPGMIQVYLGSEGALDVEGKELPRLVYVSREKRPGYNHHKKAG 1568
Query: 53 ALNALLRTSAILSNAPF 3
A+NAL+R SA+L+NAPF
Sbjct: 1569 AMNALIRVSAVLTNAPF 1619
Score = 180 bits (388), Expect = 6e-045
Identities = 96/185 (51%), Positives = 107/185 (57%)
Frame = +1 / -1
Query: 4 KGALERIAEVRSNAFKAPAFL**SCPGLFSRET*TNQGSLFPASSMTQSLPVMTWTIPAW 183
KGAL AE R AF APAFL PG FSRET T+ GS P++S SLP T IP
Sbjct: 1618 KGALVSTAETRIRAFMAPAFLWWLYPGRFSRETYTSLGSSLPSTSSAPSLPRYT*IIPG* 1439
Query: 184 SRTLFPCHGAPSGRDHPPSGTLRELAATVFM*TLNSSYSLFIARRSRTNSG*TFSLR*SI 363
SR +FP HG PS HP SG + TLNSSYSLFIA RS T G T S +*SI
Sbjct: 1438 SRVMFPGHGVPSCITHPSSGFFWAFDTKALILTLNSSYSLFIALRSFTKLGCTLSFK*SI 1259
Query: 364 F*AKYHSGARGSILCFLQKGTHFRANRHXXXXXXXXXXXXXXXDT*QQTLSTG*XTASMD 543
F* K +SGA GS+LCFLQ GTH AN DT*Q TLSTG* T ++
Sbjct: 1258 F*VK*NSGALGSMLCFLQNGTHLLANSAVSARESKRSMDAPSSDT*QLTLSTG*STDRIE 1079
Query: 544 KTVXA 558
+TV A
Sbjct: 1078 RTVFA 1064
>gb|AF081534.1|AF081534 Populus x canescens cellulose synthase (cel1) mRNA, complete cds
Length = 3395
Score = 345 bits (748), Expect = 1e-094
Identities = 135/197 (68%), Positives = 162/197 (82%)
Frame = -1 / +3
Query: 593 TVDPMXEPPLIIAXTVLSILAVXYPVDKVCCYVSDDGAAMLTFEALTETCLFARKWVPFC 414
TVDP+ EPP+I A TVLSIL+V YPVDKV CYVSDDGA+ML F++L ET FARKWVPFC
Sbjct: 945 TVDPLKEPPIITANTVLSILSVDYPVDKVSCYVSDDGASMLLFDSLAETAEFARKWVPFC 1124
Query: 413 KKHKIEPRAPEWYFAQKIDYLREKVHPEFVRERRAMKREYEEFKVHINTVAANSRKVPEG 234
KKH IEPRAPE+YF QKIDYL++KVHP FV+ERRAMKREYEEFKV IN + + ++K PE
Sbjct: 1125 KKHNIEPRAPEFYFTQKIDYLKDKVHPNFVKERRAMKREYEEFKVRINALVSKAQKKPEE 1304
Query: 233 GWSLPEGAPWHGNNVRDHAGMVQVITGNDCVMDDAGNKLPWLVYVSREKRPGHDHHKKAG 54
GW + +G PW GN RDH GM+QV G++ +D G +LP LVYVSREKRPG++HHKKAG
Sbjct: 1305 GWVMQDGTPWPGNITRDHPGMIQVYLGSEGALDVEGKELPRLVYVSREKRPGYNHHKKAG 1484
Query: 53 ALNALLRTSAILSNAPF 3
A+NAL+ SA+L+NAPF
Sbjct: 1485 AMNALILVSAVLTNAPF 1535
Score = 183 bits (394), Expect = 9e-046
Identities = 97/185 (52%), Positives = 108/185 (58%)
Frame = +1 / -2
Query: 4 KGALERIAEVRSNAFKAPAFL**SCPGLFSRET*TNQGSLFPASSMTQSLPVMTWTIPAW 183
KGAL AE R AF APAFL PG FSRET T+ GS P++S SLP T IP
Sbjct: 1534 KGALVSTAETRIRAFMAPAFLWWLYPGRFSRETYTSLGSSLPSTSSAPSLPRYT*IIPG* 1355
Query: 184 SRTLFPCHGAPSGRDHPPSGTLRELAATVFM*TLNSSYSLFIARRSRTNSG*TFSLR*SI 363
SR +FP HG PS HP SG + TLNSSYSLFIA RS T G T S +*SI
Sbjct: 1354 SRVMFPGHGVPSCITHPSSGFFWAFDTKALILTLNSSYSLFIALRSFTKLGCTLSFK*SI 1175
Query: 364 F*AKYHSGARGSILCFLQKGTHFRANRHXXXXXXXXXXXXXXXDT*QQTLSTG*XTASMD 543
F* K +SGA GS+LCFLQ GTHF AN DT*Q TLSTG* T ++
Sbjct: 1174 F*VK*NSGALGSMLCFLQNGTHFLANSAVSARESKRSMDAPSSDT*QLTLSTG*STDRIE 995
Query: 544 KTVXA 558
+TV A
Sbjct: 994 RTVFA 980
>gb|AY055724.2| Populus tremuloides cellulose synthase (CesA5) mRNA, complete cds
Length = 3532
Score = 336 bits (728), Expect = 7e-092
Identities = 132/193 (68%), Positives = 156/193 (80%)
Frame = -1 / +2
Query: 581 MXEPPLIIAXTVLSILAVXYPVDKVCCYVSDDGAAMLTFEALTETCLFARKWVPFCKKHK 402
+ EPPL+ A VLSILA P+DKV CYVSDDGAAMLTFEAL+ET F+RKWVPFCKK+
Sbjct: 1313 LKEPPLVPANAVLSILAGDSPIDKVSCYVSDDGAAMLTFEALSETSEFSRKWVPFCKKYS 1492
Query: 401 IEPRAPEWYFAQKIDYLREKVHPEFVRERRAMKREYEEFKVHINTVAANSRKVPEGGWSL 222
IEPRAPEWYFAQKIDYL++KV P FV++RRAMKREYEEFK+ IN + A ++KVPE GW +
Sbjct: 1493 IEPRAPEWYFAQKIDYLKDKVQPSFVKDRRAMKREYEEFKIRINGLVAKAQKVPEEGWIM 1672
Query: 221 PEGAPWHGNNVRDHAGMVQVITGNDCVMDDAGNKLPWLVYVSREKRPGHDHHKKAGALNA 42
+G PW GNN RDH GM+QV G +D GN+LP LVYVSREKRPG HHKKAGA+N+
Sbjct: 1673 QDGTPWPGNNTRDHPGMIQVFLGQSGGLDSDGNELPRLVYVSREKRPGFQHHKKAGAMNS 1852
Query: 41 LLRTSAILSNAPF 3
L+R SA+L+N PF
Sbjct: 1853 LVRVSAVLTNGPF 1891
Score = 187 bits (402), Expect = 7e-047
Identities = 95/185 (51%), Positives = 107/185 (57%)
Frame = +1 / -2
Query: 4 KGALERIAEVRSNAFKAPAFL**SCPGLFSRET*TNQGSLFPASSMTQSLPVMTWTIPAW 183
KG L A+ R++ F APAFL PG FSRET*TN+GS P+ S P T IP W
Sbjct: 1890 KGPLVSTADTRTSEFMAPAFLWCWKPGRFSRET*TNRGSSLPSESSPPLWPKKT*IIPGW 1711
Query: 184 SRTLFPCHGAPSGRDHPPSGTLRELAATVFM*TLNSSYSLFIARRSRTNSG*TFSLR*SI 363
S LFP HG PS HP SGT LA + + LNSSYSLFIA RS T G T S +*SI
Sbjct: 1710 SLVLFPGHGVPSCIIHPSSGTFCALATSPLIRILNSSYSLFIALRSLTKDGCTLSFK*SI 1531
Query: 364 F*AKYHSGARGSILCFLQKGTHFRANRHXXXXXXXXXXXXXXXDT*QQTLSTG*XTASMD 543
F AKYHSGARGS+L FLQKGTHF N +T* +TLS G A +D
Sbjct: 1530 FCAKYHSGARGSMLYFLQKGTHFLENSEVSDKASNVNIAAPSSET*HETLSIGESPARID 1351
Query: 544 KTVXA 558
T A
Sbjct: 1350 STAFA 1336
Score = 81.7 bits (172), Expect(3) = 9e-021
Identities = 34/83 (40%), Positives = 49/83 (59%)
Frame = +3 / -1
Query: 180 MVSNIISMPWSSFW*GPSSLGNFA*ISSYCVYVNLKFFVFSLHCTSFSNKLWVNLFS*IV 359
MVS +IS PW PS + + + + N KFF+FSLH ++ +K W++ +V
Sbjct: 1714 MVSGVISRPWGPILHNPSFFRHLLRLGNKPIDTNFKFFIFSLHSSTVFDKRWLHFILQVV 1535
Query: 360 NFLSKIPFRSPRLDFVFLTEGNP 428
N L K+PF SPRL+ V L EG+P
Sbjct: 1534 NLLCKVPFWSPRLNAVLLAEGHP 1466
Score = 28.1 bits (55), Expect(3) = 9e-021
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = +2 / -3
Query: 461 LQK*ALQHHHPTHSSKLYQ 517
LQ LQHHH HS +L Q
Sbjct: 1433 LQMSTLQHHHQRHSMRLCQ 1377
Score = 27.2 bits (53), Expect(3) = 9e-021
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +3 / -1
Query: 45 IQGTSFFMMIMSRPFLT*NIDQPRQ 119
I GTSF +++ +R T NI+ PR+
Sbjct: 1849 IHGTSFLVVLEARTLFTRNIN*PRK 1775
>gb|AY095297.1| Populus tremuloides cellulose synthase (CesA2) mRNA, complete cds
Length = 3277
Score = 336 bits (727), Expect = 1e-091
Identities = 132/197 (67%), Positives = 157/197 (79%)
Frame = -1 / +3
Query: 593 TVDPMXEPPLIIAXTVLSILAVXYPVDKVCCYVSDDGAAMLTFEALTETCLFARKWVPFC 414
TVDPM EPPL+ T+LSILA+ YPV+K+ CY+SDDGA+M TFEA++ET FARKWVPFC
Sbjct: 1023 TVDPMKEPPLVTGNTLLSILAMDYPVEKISCYLSDDGASMCTFEAMSETAEFARKWVPFC 1202
Query: 413 KKHKIEPRAPEWYFAQKIDYLREKVHPEFVRERRAMKREYEEFKVHINTVAANSRKVPEG 234
KK IEPRAPE+YF K+DYL++KV P FV+ERRAMKREYEEFKV IN + A ++KVP
Sbjct: 1203 KKFNIEPRAPEFYFTLKVDYLKDKVQPTFVKERRAMKREYEEFKVRINAIVAKAQKVPTE 1382
Query: 233 GWSLPEGAPWHGNNVRDHAGMVQVITGNDCVMDDAGNKLPWLVYVSREKRPGHDHHKKAG 54
GW + +G PW GNN RDH GM+QV G+ D GN+LP LVYVSREKRPG HHKKAG
Sbjct: 1383 GWIMQDGTPWPGNNTRDHPGMIQVFLGHSGGHDVEGNELPRLVYVSREKRPGFSHHKKAG 1562
Query: 53 ALNALLRTSAILSNAPF 3
A+NAL+R AIL+NAPF
Sbjct: 1563 AMNALIRVLAILTNAPF 1613
Score = 182 bits (393), Expect = 1e-045
Identities = 97/183 (53%), Positives = 108/183 (59%)
Frame = +1 / -1
Query: 4 KGALERIAEVRSNAFKAPAFL**SCPGLFSRET*TNQGSLFPASSMTQSLPVMTWTIPAW 183
KGAL +A R AF APAFL* PGLFSR+T T +GS FP++S P T IP
Sbjct: 1612 KGALVSMARTRIRAFMAPAFL*CEKPGLFSRDTYTRRGSSFPSTSCPPL*PRNT*IIPG* 1433
Query: 184 SRTLFPCHGAPSGRDHPPSGTLRELAATVFM*TLNSSYSLFIARRSRTNSG*TFSLR*SI 363
S LFP HG PS HP GT A F+ TLNSSYSLFIARRS T G*T SLR*S
Sbjct: 1432 SLVLFPGHGVPSCIIHPSVGTFCAFATIAFIRTLNSSYSLFIARRSLTKVG*TLSLR*ST 1253
Query: 364 F*AKYHSGARGSILCFLQKGTHFRANRHXXXXXXXXXXXXXXXDT*QQTLSTG*XTASMD 543
F K +SGARGS+L FLQ GTHFRAN D * + STG* A +D
Sbjct: 1252 FRVK*NSGARGSMLNFLQNGTHFRANSAVSDMASKVHIEAPSSDR*HEIFSTG*SMAKID 1073
Query: 544 KTV 552
K+V
Sbjct: 1072 KSV 1064
>gb|AY162181.1| Populus tremuloides cellulose synthase (CesA4) mRNA, complete cds
Length = 3640
Score = 334 bits (724), Expect = 3e-091
Identities = 134/197 (68%), Positives = 159/197 (80%)
Frame = -1 / +1
Query: 593 TVDPMXEPPLIIAXTVLSILAVXYPVDKVCCYVSDDGAAMLTFEALTETCLFARKWVPFC 414
TVDPM EPP++ A TVLSILAV YPVDKV CYVSDDG+AMLTFEAL+ET FARK C
Sbjct: 1120 TVDPMKEPPIVTANTVLSILAVDYPVDKVSCYVSDDGSAMLTFEALSETAEFARKRRLSC 1299
Query: 413 KKHKIEPRAPEWYFAQKIDYLREKVHPEFVRERRAMKREYEEFKVHINTVAANSRKVPEG 234
KKH IEPRAPE+YFAQK+DYL +K+ P FV+ERRAMKREYEEFKV IN + A ++K+PE
Sbjct: 1300 KKHNIEPRAPEFYFAQKMDYLEDKIQPSFVKERRAMKREYEEFKVRINALVAKAQKMPEE 1479
Query: 233 GWSLPEGAPWHGNNVRDHAGMVQVITGNDCVMDDAGNKLPWLVYVSREKRPGHDHHKKAG 54
GW++ +G PW GNN RDH GM+QV G+ +D GN+LP LVYVSREKRPG HHKKAG
Sbjct: 1480 GWTMQDGTPWPGNNPRDHPGMIQVFLGHSGGLDTDGNELPRLVYVSREKRPGFQHHKKAG 1659
Query: 53 ALNALLRTSAILSNAPF 3
A+NAL+R SA+L+N +
Sbjct: 1660 AMNALIRVSAVLTNGAY 1710
Score = 166 bits (356), Expect = 2e-040
Identities = 95/178 (53%), Positives = 102/178 (57%)
Frame = +1 / -3
Query: 25 AEVRSNAFKAPAFL**SCPGLFSRET*TNQGSLFPASSMTQSLPVMTWTIPAWSRTLFPC 204
AE R +AF APAFL* PGLFSRET T +GS FP+ S P T IP S LFP
Sbjct: 1688 AETRISAFIAPAFL*CWNPGLFSRETYTRRGSSFPSVSSPPL*PKNT*IIPG*SLGLFPG 1509
Query: 205 HGAPSGRDHPPSGTLRELAATVFM*TLNSSYSLFIARRSRTNSG*TFSLR*SIF*AKYHS 384
HG PS P SG LA + TLNSSYSLFIARRS T G S R*SIF AK +S
Sbjct: 1508 HGVPSCIVQPSSGIF*ALATRALIRTLNSSYSLFIARRSFTKEGCILSSR*SIFWAK*NS 1329
Query: 385 GARGSILCFLQKGTHFRANRHXXXXXXXXXXXXXXXDT*QQTLSTG*XTASMDKTVXA 558
GA GSILCFLQ+ F AN +T* TLSTG* TA MD TV A
Sbjct: 1328 GALGSILCFLQERRLFLANSAVSERASNVNIAEPSSET*HDTLSTG*STARMDNTVFA 1155
>gb|AF072131.1|AF072131 Populus tremuloides secondary xylem cellulose synthase (celA) mRNA,
complete cds
Length = 3232
Score = 259 bits (561), Expect(2) = 2e-087
Identities = 100/140 (71%), Positives = 117/140 (83%)
Frame = -1 / +3
Query: 593 TVDPMXEPPLIIAXTVLSILAVXYPVDKVCCYVSDDGAAMLTFEALTETCLFARKWVPFC 414
TVDP+ EPPLI A TVLSILAV YPVDKV CYVSDDGAAML+FE+L ET FARKWVPFC
Sbjct: 843 TVDPLKEPPLITANTVLSILAVDYPVDKVSCYVSDDGAAMLSFESLVETAEFARKWVPFC 1022
Query: 413 KKHKIEPRAPEWYFAQKIDYLREKVHPEFVRERRAMKREYEEFKVHINTVAANSRKVPEG 234
KK IEPRAPE+YF+QKIDYL++KV P FV+ERRAMKR+YEE+KV +N + A ++K PE
Sbjct: 1023 KKFSIEPRAPEFYFSQKIDYLKDKVQPSFVKERRAMKRDYEEYKVRVNALVAKAQKTPEE 1202
Query: 233 GWSLPEGAPWHGNNVRDHAG 174
GW++ +G PW GNN RDH G
Sbjct: 1203 GWTMQDGTPWPGNNTRDHPG 1262
Score = 118 bits (253), Expect(2) = 1e-034
Identities = 66/128 (51%), Positives = 71/128 (55%)
Frame = +1 / -1
Query: 175 PAWSRTLFPCHGAPSGRDHPPSGTLRELAATVFM*TLNSSYSLFIARRSRTNSG*TFSLR 354
P SR LFP G PS HP SG A TL SS SLFIA RS T G*T S +
Sbjct: 1261 PG*SRVLFPGQGVPSCIVHPSSGVF*AFATRALTRTLYSS*SLFIALRSFTKEG*TLSFK 1082
Query: 355 *SIF*AKYHSGARGSILCFLQKGTHFRANRHXXXXXXXXXXXXXXXDT*QQTLSTG*XTA 534
*SIF K +SGA GSI FLQ GTHF AN DT*Q+TLSTG* TA
Sbjct: 1081 *SIFCEK*NSGALGSIENFLQNGTHFLANSAVSTRDSNESIAAPSSDT*QETLSTG*STA 902
Query: 535 SMDKTVXA 558
M++TV A
Sbjct: 901 RMERTVLA 878
Score = 82.6 bits (174), Expect(2) = 2e-087
Identities = 33/45 (73%), Positives = 39/45 (86%)
Frame = -1 / +3
Query: 137 DDAGNKLPWLVYVSREKRPGHDHHKKAGALNALLRTSAILSNAPF 3
D GN+LP LVYVSREKRPG+ HHKKAGA NAL+R SA+L+NAP+
Sbjct: 1302 DIEGNELPRLVYVSREKRPGYQHHKKAGAENALVRVSAVLTNAPY 1436
Score = 47.3 bits (97), Expect(2) = 1e-034
Identities = 24/49 (48%), Positives = 29/49 (59%)
Frame = +1 / -1
Query: 7 GALERIAEVRSNAFKAPAFL**SCPGLFSRET*TNQGSLFPASSMTQSL 153
GA A+ + AF APAFL PGLFS ET T +GS FP+ S S+
Sbjct: 1432 GAFVSTADTLTRAFSAPAFLWCW*PGLFSLETYTRRGSSFPSMSRAPSI 1286
>gb|DQ004570.1| Populus tomentosa cellulose synthase (cesa1) mRNA, complete cds
Length = 3215
Score = 259 bits (561), Expect(2) = 2e-087
Identities = 100/140 (71%), Positives = 117/140 (83%)
Frame = -1 / +1
Query: 593 TVDPMXEPPLIIAXTVLSILAVXYPVDKVCCYVSDDGAAMLTFEALTETCLFARKWVPFC 414
TVDP+ EPPLI A TVLSILAV YPVDKV CYVSDDGAAML+FE+L ET FARKWVPFC
Sbjct: 826 TVDPLKEPPLITANTVLSILAVDYPVDKVSCYVSDDGAAMLSFESLVETAEFARKWVPFC 1005
Query: 413 KKHKIEPRAPEWYFAQKIDYLREKVHPEFVRERRAMKREYEEFKVHINTVAANSRKVPEG 234
KK IEPRAPE+YF+QKIDYL++KV P FV+ERRAMKR+YEE+KV +N + A ++K PE
Sbjct: 1006 KKFSIEPRAPEFYFSQKIDYLKDKVQPSFVKERRAMKRDYEEYKVRVNALVAKAQKTPEE 1185
Query: 233 GWSLPEGAPWHGNNVRDHAG 174
GW++ +G PW GNN RDH G
Sbjct: 1186 GWTMQDGTPWPGNNTRDHPG 1245
Score = 118 bits (253), Expect(2) = 1e-034
Identities = 66/128 (51%), Positives = 71/128 (55%)
Frame = +1 / -1
Query: 175 PAWSRTLFPCHGAPSGRDHPPSGTLRELAATVFM*TLNSSYSLFIARRSRTNSG*TFSLR 354
P SR LFP G PS HP SG A TL SS SLFIA RS T G*T S +
Sbjct: 1244 PG*SRVLFPGQGVPSCIVHPSSGVF*AFATRALTRTLYSS*SLFIALRSFTKEG*TLSFK 1065
Query: 355 *SIF*AKYHSGARGSILCFLQKGTHFRANRHXXXXXXXXXXXXXXXDT*QQTLSTG*XTA 534
*SIF K +SGA GSI FLQ GTHF AN DT*Q+TLSTG* TA
Sbjct: 1064 *SIFCEK*NSGALGSIENFLQNGTHFLANSAVSTRDSNESIAAPSSDT*QETLSTG*STA 885
Query: 535 SMDKTVXA 558
M++TV A
Sbjct: 884 RMERTVLA 861
Score = 82.6 bits (174), Expect(2) = 2e-087
Identities = 33/45 (73%), Positives = 39/45 (86%)
Frame = -1 / +1
Query: 137 DDAGNKLPWLVYVSREKRPGHDHHKKAGALNALLRTSAILSNAPF 3
D GN+LP LVYVSREKRPG+ HHKKAGA NAL+R SA+L+NAP+
Sbjct: 1285 DIEGNELPRLVYVSREKRPGYQHHKKAGAENALVRVSAVLTNAPY 1419
Score = 47.3 bits (97), Expect(2) = 1e-034
Identities = 24/49 (48%), Positives = 29/49 (59%)
Frame = +1 / -1
Query: 7 GALERIAEVRSNAFKAPAFL**SCPGLFSRET*TNQGSLFPASSMTQSL 153
GA A+ + AF APAFL PGLFS ET T +GS FP+ S S+
Sbjct: 1415 GAFVSTADTLTRAFSAPAFLWCW*PGLFSLETYTRRGSSFPSMSRAPSI 1269
>gb|BU823358.1|BU823358 UB51DPD11 Populus tremula cambium cDNA library Populus tremula cDNA
5 prime, mRNA sequence
Length = 609
Score = 309 bits (670), Expect = 7e-084
Identities = 120/172 (69%), Positives = 143/172 (83%)
Frame = -1 / +2
Query: 518 VDKVCCYVSDDGAAMLTFEALTETCLFARKWVPFCKKHKIEPRAPEWYFAQKIDYLREKV 339
VDKV CYVSDDG+AMLTFEAL+ET FARKWVPFCKKH IEPRAPE+YFAQKIDYL++K+
Sbjct: 8 VDKVSCYVSDDGSAMLTFEALSETAEFARKWVPFCKKHNIEPRAPEFYFAQKIDYLKDKI 187
Query: 338 HPEFVRERRAMKREYEEFKVHINTVAANSRKVPEGGWSLPEGAPWHGNNVRDHAGMVQVI 159
P FV+ERRAMKREYEEFKV IN + A ++K+PE GW++ +G PW GNN RDH GM+QV
Sbjct: 188 QPSFVKERRAMKREYEEFKVRINALVAKAQKMPEEGWTMQDGTPWPGNNPRDHPGMIQVF 367
Query: 158 TGNDCVMDDAGNKLPWLVYVSREKRPGHDHHKKAGALNALLRTSAILSNAPF 3
G+ +D GN+LP LVYVSREKRPG HHKKAGA+NAL+R SA+L+N +
Sbjct: 368 LGHSGGLDTDGNELPRLVYVSREKRPGFQHHKKAGAMNALIRVSAVLTNGAY 523
Score = 168 bits (361), Expect = 3e-041
Identities = 90/165 (54%), Positives = 97/165 (58%)
Frame = +1 / -1
Query: 25 AEVRSNAFKAPAFL**SCPGLFSRET*TNQGSLFPASSMTQSLPVMTWTIPAWSRTLFPC 204
AE R +AF APAFL* PGLFSR+T T +GS FP+ S P TW IP S LFP
Sbjct: 501 AETRISAFIAPAFL*CWNPGLFSRDTYTRRGSSFPSVSSPPL*PKNTWIIPG*SLGLFPG 322
Query: 205 HGAPSGRDHPPSGTLRELAATVFM*TLNSSYSLFIARRSRTNSG*TFSLR*SIF*AKYHS 384
HG PS P SG LA + TLNSSYSLFIARRS T G S R*SIF AK +S
Sbjct: 321 HGVPSCIVQPSSGIF*ALATRALIRTLNSSYSLFIARRSFTKEGCILSFR*SIFWAK*NS 142
Query: 385 GARGSILCFLQKGTHFRANRHXXXXXXXXXXXXXXXDT*QQTLST 519
GA GSILCFLQKGTHF AN +T* TLST
Sbjct: 141 GALGSILCFLQKGTHFLANSAVSERASNVNIAEPSSET*HDTLST 7
>gb|AJ778214.1|AJ778214 AJ778214 Populus euphratica root 3-6 months Populus euphratica cDNA
clone P0000400040H10F1, mRNA sequence
Length = 612
Score = 309 bits (670), Expect = 7e-084
Identities = 120/172 (69%), Positives = 143/172 (83%)
Frame = -1 / +2
Query: 518 VDKVCCYVSDDGAAMLTFEALTETCLFARKWVPFCKKHKIEPRAPEWYFAQKIDYLREKV 339
VDKV CYVSDDG+AMLTFEAL+ET FARKWVPFCKKH IEPRAPE+YFAQKIDYL++K+
Sbjct: 14 VDKVSCYVSDDGSAMLTFEALSETAEFARKWVPFCKKHSIEPRAPEFYFAQKIDYLKDKI 193
Query: 338 HPEFVRERRAMKREYEEFKVHINTVAANSRKVPEGGWSLPEGAPWHGNNVRDHAGMVQVI 159
P FV+ERRAMKREYEEFKV IN + A ++K+PE GW++ +G PW GNN RDH GM+QV
Sbjct: 194 QPSFVKERRAMKREYEEFKVRINALVAKAQKMPEEGWTMQDGTPWPGNNPRDHPGMIQVF 373
Query: 158 TGNDCVMDDAGNKLPWLVYVSREKRPGHDHHKKAGALNALLRTSAILSNAPF 3
G+ +D GN+LP LVYVSREKRPG HHKKAGA+NAL+R SA+L+N +
Sbjct: 374 LGHSGGLDTDGNELPRLVYVSREKRPGFQHHKKAGAMNALIRVSAVLTNGAY 529
Score = 172 bits (371), Expect = 1e-042
Identities = 92/165 (55%), Positives = 98/165 (59%)
Frame = +1 / -1
Query: 25 AEVRSNAFKAPAFL**SCPGLFSRET*TNQGSLFPASSMTQSLPVMTWTIPAWSRTLFPC 204
AE R NAF APAFL* PGLFSRET T++GS FP+ S P TW IP S LFP
Sbjct: 507 AETRINAFIAPAFL*CWNPGLFSRETYTSRGSSFPSVSSPPL*PKNTWIIPG*SLGLFPG 328
Query: 205 HGAPSGRDHPPSGTLRELAATVFM*TLNSSYSLFIARRSRTNSG*TFSLR*SIF*AKYHS 384
HG PS P SG LA + TLNSSYSLFIARRS T G S R*SIF AK +S
Sbjct: 327 HGVPSCIVQPSSGIF*ALATRALIRTLNSSYSLFIARRSLTKEGCILSFR*SIFWAK*NS 148
Query: 385 GARGSILCFLQKGTHFRANRHXXXXXXXXXXXXXXXDT*QQTLST 519
GA GSILCFLQKGTHF AN +T* TLST
Sbjct: 147 GALGSILCFLQKGTHFLANSAVSERASNVNIAEPSSET*HDTLST 13
>gb|AJ779945.1|AJ779945 AJ779945 Populus euphratica root 3-6 months Populus euphratica cDNA
clone P0000800009G06F1, mRNA sequence
Length = 735
Score = 308 bits (667), Expect = 2e-083
Identities = 119/172 (69%), Positives = 143/172 (83%)
Frame = -1 / +1
Query: 518 VDKVCCYVSDDGAAMLTFEALTETCLFARKWVPFCKKHKIEPRAPEWYFAQKIDYLREKV 339
VDKV CYVSDDG+AMLTFEAL+ET FARKWVPFCKKH IEPRAPE+YF+QKIDYL++K+
Sbjct: 16 VDKVSCYVSDDGSAMLTFEALSETAEFARKWVPFCKKHNIEPRAPEFYFSQKIDYLKDKI 195
Query: 338 HPEFVRERRAMKREYEEFKVHINTVAANSRKVPEGGWSLPEGAPWHGNNVRDHAGMVQVI 159
P FV+ERRAMKREYEEFKV IN + A ++K+PE GW++ +G PW GNN RDH GM+QV
Sbjct: 196 QPSFVKERRAMKREYEEFKVRINALVAKAQKMPEEGWTMQDGTPWPGNNPRDHPGMIQVF 375
Query: 158 TGNDCVMDDAGNKLPWLVYVSREKRPGHDHHKKAGALNALLRTSAILSNAPF 3
G+ +D GN+LP LVYVSREKRPG HHKKAGA+NAL+R SA+L+N +
Sbjct: 376 LGHSGGLDTDGNELPRLVYVSREKRPGFQHHKKAGAMNALIRVSAVLTNGAY 531
Score = 167 bits (359), Expect = 6e-041
Identities = 90/165 (54%), Positives = 96/165 (58%)
Frame = +1 / -2
Query: 25 AEVRSNAFKAPAFL**SCPGLFSRET*TNQGSLFPASSMTQSLPVMTWTIPAWSRTLFPC 204
AE R +AF APAFL* PGLFSRET T +GS FP+ S P TW IP S LFP
Sbjct: 509 AETRISAFIAPAFL*CWNPGLFSRETYTRRGSSFPSVSSPPL*PKNTWIIPG*SLGLFPG 330
Query: 205 HGAPSGRDHPPSGTLRELAATVFM*TLNSSYSLFIARRSRTNSG*TFSLR*SIF*AKYHS 384
HG PS P SG LA + TLNSSYSLFIARRS T G S R*SIF K +S
Sbjct: 329 HGVPSCIVQPSSGIF*ALATRALIRTLNSSYSLFIARRSFTKEGCILSFR*SIFWEK*NS 150
Query: 385 GARGSILCFLQKGTHFRANRHXXXXXXXXXXXXXXXDT*QQTLST 519
GA GSILCFLQKGTHF AN +T* TLST
Sbjct: 149 GALGSILCFLQKGTHFLANSAVSERASNVNIAEPSSET*HDTLST 15
>gb|AJ779545.1|AJ779545 AJ779545 Populus euphratica root 3-6 months Populus euphratica cDNA
clone P0000800003H02F1, mRNA sequence
Length = 713
Score = 301 bits (652), Expect = 2e-081
Identities = 116/169 (68%), Positives = 140/169 (82%)
Frame = -1 / +2
Query: 509 VCCYVSDDGAAMLTFEALTETCLFARKWVPFCKKHKIEPRAPEWYFAQKIDYLREKVHPE 330
V CYVSDDG+AMLTFEAL+ET FARKWVPFCKKH IEPRAPE+YF+QKIDYL++K+ P
Sbjct: 2 VSCYVSDDGSAMLTFEALSETAEFARKWVPFCKKHNIEPRAPEFYFSQKIDYLKDKIQPS 181
Query: 329 FVRERRAMKREYEEFKVHINTVAANSRKVPEGGWSLPEGAPWHGNNVRDHAGMVQVITGN 150
FV+ERRAMKREYEEFKV IN + A ++K+PE GW++ +G PW GNN RDH GM+QV G+
Sbjct: 182 FVKERRAMKREYEEFKVRINALVAKAQKMPEEGWTMQDGTPWPGNNPRDHPGMIQVFLGH 361
Query: 149 DCVMDDAGNKLPWLVYVSREKRPGHDHHKKAGALNALLRTSAILSNAPF 3
+D GN+LP LVYVSREKRPG HHKKAGA+NAL+R SA+L+N +
Sbjct: 362 SGGLDTDGNELPRLVYVSREKRPGFQHHKKAGAMNALIRVSAVLTNGAY 508
Score = 161 bits (346), Expect = 4e-039
Identities = 84/139 (60%), Positives = 89/139 (64%)
Frame = +1 / -3
Query: 25 AEVRSNAFKAPAFL**SCPGLFSRET*TNQGSLFPASSMTQSLPVMTWTIPAWSRTLFPC 204
AE R +AF APAFL* PGLFSRET T +GS FP+ S P TW IP S LFP
Sbjct: 486 AETRISAFIAPAFL*CWNPGLFSRETYTRRGSSFPSVSSPPL*PKNTWIIPG*SLGLFPG 307
Query: 205 HGAPSGRDHPPSGTLRELAATVFM*TLNSSYSLFIARRSRTNSG*TFSLR*SIF*AKYHS 384
HG PS P SG LA + TLNSSYSLFIARRS T G S R*SIF K +S
Sbjct: 306 HGVPSCIVQPSSGIF*ALATRALIRTLNSSYSLFIARRSFTKEGCILSFR*SIFWEK*NS 127
Query: 385 GARGSILCFLQKGTHFRAN 441
GA GSILCFLQKGTHF AN
Sbjct: 126 GALGSILCFLQKGTHFLAN 70
>gb|CK318831.1|CK318831 X9P03h01 Populus stem seasonal library Populus deltoides cDNA, mRNA
sequence
Length = 727
Score = 238 bits (515), Expect(2) = 2e-064
Identities = 92/134 (68%), Positives = 109/134 (81%)
Frame = -1 / +3
Query: 593 TVDPMXEPPLIIAXTVLSILAVXYPVDKVCCYVSDDGAAMLTFEALTETCLFARKWVPFC 414
TVDP+ EPP+I A TVLSIL+V YPVDKV CYVSDDGA+ML F++L ET FAR+WVPFC
Sbjct: 276 TVDPLKEPPIITANTVLSILSVDYPVDKVSCYVSDDGASMLLFDSLAETAEFARRWVPFC 455
Query: 413 KKHKIEPRAPEWYFAQKIDYLREKVHPEFVRERRAMKREYEEFKVHINTVAANSRKVPEG 234
KKH IEPRAPE+YF QKIDYL++KVHP FV+ERRAMKREYEEFKV IN + ++K PE
Sbjct: 456 KKHNIEPRAPEFYFTQKIDYLKDKVHPNFVKERRAMKREYEEFKVRINALVPKAQKKPEE 635
Query: 233 GWSLPEGAPWHGNN 192
W + +G PW G +
Sbjct: 636 XWVMXDGTPWPGTS 677
Score = 114 bits (243), Expect = 6e-025
Identities = 60/120 (50%), Positives = 67/120 (55%)
Frame = +1 / -1
Query: 199 PCHGAPSGRDHPPSGTLRELAATVFM*TLNSSYSLFIARRSRTNSG*TFSLR*SIF*AKY 378
P HG PS H SG + TLNSSYSLFIA RS T G T S +*SIF* K
Sbjct: 670 PGHGVPSCITHXSSGFFWAFGTNALILTLNSSYSLFIALRSFTKLGCTLSFK*SIF*VK* 491
Query: 379 HSGARGSILCFLQKGTHFRANRHXXXXXXXXXXXXXXXDT*QQTLSTG*XTASMDKTVXA 558
+SGA GS+LCFLQ GTH AN DT*Q TLSTG* T +++TV A
Sbjct: 490 NSGALGSMLCFLQNGTHLLANSAVSARESKRSMDAPSSDT*QLTLSTG*STDRIERTVFA 311
Score = 27.2 bits (53), Expect(2) = 2e-064
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = -1 / +2
Query: 209 PWHGNNVRDHAGMVQVITGND 147
P N RDH GM+QV G++
Sbjct: 659 PMAWNITRDHPGMIQVYPGSE 721
>gb|CK107258.1|CK107258 UB51DPD11.5pR Populus active cambium cDNA library Populus tremula
cDNA clone UB51DPD11 5', mRNA sequence
Length = 596
Score = 177 bits (380), Expect(5) = 3e-063
Identities = 67/90 (74%), Positives = 80/90 (88%)
Frame = -1 / +3
Query: 491 DDGAAMLTFEALTETCLFARKWVPFCKKHKIEPRAPEWYFAQKIDYLREKVHPEFVRERR 312
DDG+AMLTFEAL+ET FARKWVPFCKKH IEPRAPE+YFAQKIDYL++K+ P FV+ERR
Sbjct: 33 DDGSAMLTFEALSETAEFARKWVPFCKKHNIEPRAPEFYFAQKIDYLKDKIQPSFVKERR 212
Query: 311 AMKREYEEFKVHINTVAANSRKVPEGGWSL 222
AMKREYEEFKV IN + A ++K+PE GW++
Sbjct: 213 AMKREYEEFKVRINALVAKAQKMPEEGWTM 302
Score = 95.0 bits (201), Expect(2) = 3e-026
Identities = 47/70 (67%), Positives = 49/70 (70%)
Frame = +1 / -2
Query: 232 PPSGTLRELAATVFM*TLNSSYSLFIARRSRTNSG*TFSLR*SIF*AKYHSGARGSILCF 411
P SG LA + TLNSSYSLFIARRS T G S R*SIF AK +SGA GSILCF
Sbjct: 292 PSSGIF*ALATRALIRTLNSSYSLFIARRSFTKEGCILSFR*SIFWAK*NSGALGSILCF 113
Query: 412 LQKGTHFRAN 441
LQKGTHF AN
Sbjct: 112 LQKGTHFLAN 83
Score = 60.6 bits (126), Expect(5) = 3e-063
Identities = 23/40 (57%), Positives = 28/40 (70%)
Frame = -1 / +1
Query: 218 EGAPWHGNNVRDHAGMVQVITGNDCVMDDAGNKLPWLVYV 99
+G PW GNN RDH GM+QV G+ +D GN+LP LVYV
Sbjct: 307 DGTPWPGNNPRDHPGMIQVFLGHSGGLDTDGNELPRLVYV 426
Score = 43.2 bits (88), Expect(2) = 3e-026
Identities = 21/44 (47%), Positives = 23/44 (52%)
Frame = +1 / -1
Query: 88 FSRET*TNQGSLFPASSMTQSLPVMTWTIPAWSRTLFPCHGAPS 219
F T T +GS FP+ S P TW IP S LFP HG PS
Sbjct: 437 FHEITYTRRGSSFPSVSSPPL*PKNTWIIPG*SLGLFPGHGVPS 306
Score = 27.2 bits (53), Expect(5) = 3e-063
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -1 / +2
Query: 110 LVYVSREKRPGHDHHKKA 57
L +SREKRPG H K++
Sbjct: 416 LYMLSREKRPGFQHSKES 469
Score = 26.3 bits (51), Expect(5) = 3e-063
Identities = 10/13 (76%), Positives = 12/13 (92%)
Frame = -1 / +3
Query: 65 KKAGALNALLRTS 27
KKAGA+NAL+R S
Sbjct: 462 KKAGAMNALIRVS 500
Score = 25.4 bits (49), Expect(5) = 3e-063
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -1 / +2
Query: 521 PVDKVCCYVS 492
PVDKV CYVS
Sbjct: 2 PVDKVSCYVS 31
>gb|CF229078.1|CF229078 PtaXM0021A1A0101 Poplar cDNA library from mature xylem Populus alba
x Populus tremula cDNA 5', mRNA sequence
Length = 537
Score = 232 bits (501), Expect(2) = 4e-062
Identities = 92/153 (60%), Positives = 112/153 (73%)
Frame = -1 / +3
Query: 461 ALTETCLFARKWVPFCKKHKIEPRAPEWYFAQKIDYLREKVHPEFVRERRAMKREYEEFK 282
+L ET FAR+WVPFCKKH EPRAPE+Y QKI YL++KVHP FV RA KRE EE K
Sbjct: 75 SLAETAEFARRWVPFCKKHNXEPRAPEFY*XQKIGYLKDKVHPNFVNVXRAXKREXEEXK 254
Query: 281 VHINTVAANSRKVPEGGWSLPEGAPWHGNNVRDHAGMVQVITGNDCVMDDAGNKLPWLVY 102
V IN + ++K P+ W + +G PW GN RDH GM+QV G++ D G +LP LVY
Sbjct: 255 VRINALVXKAQKKPQEXWVMQDGTPWPGNITRDHPGMIQVYLGSEGAPDVEGKELPRLVY 434
Query: 101 VSREKRPGHDHHKKAGALNALLRTSAILSNAPF 3
VSREKRPG++HHKKAGA+NAL+R SA L+NAPF
Sbjct: 435 VSREKRPGYNHHKKAGAMNALIRVSAXLTNAPF 533
Score = 133 bits (284), Expect = 1e-030
Identities = 73/146 (50%), Positives = 82/146 (56%)
Frame = +1 / -3
Query: 4 KGALERIAEVRSNAFKAPAFL**SCPGLFSRET*TNQGSLFPASSMTQSLPVMTWTIPAW 183
KGAL AE R AF APAFL PG FSRET T+ GS P++S SLP T IP
Sbjct: 532 KGALVSXAETRIRAFMAPAFLWWLYPGRFSRETYTSLGSSLPSTSGAPSLPRYT*IIPG* 353
Query: 184 SRTLFPCHGAPSGRDHPPSGTLRELAATVFM*TLNSSYSLFIARRSRTNSG*TFSLR*SI 363
SR +FP HG PS H G + TL SS SLF A + T G T S +* I
Sbjct: 352 SRVMFPGHGVPSCITHXSCGFFWAFXTKALILTLXSSXSLFXALXTFTKLGCTLSFK*PI 173
Query: 364 F*AKYHSGARGSILCFLQKGTHFRAN 441
F* +SGA GS+LCFLQ GTH AN
Sbjct: 172 F*X**NSGALGSMLCFLQNGTHLLAN 95
Score = 25.8 bits (50), Expect(2) = 4e-062
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -1 / +2
Query: 515 DKVCCYVSDD 486
DKV CYVSDD
Sbjct: 20 DKVSCYVSDD 49
>gb|AY162184.1| Populus tremuloides cellulose synthase-like protein D4 (CSLD4) mRNA,
partial cds
Length = 3570
Score = 171 bits (369), Expect(2) = 4e-059
Identities = 68/116 (58%), Positives = 86/116 (74%)
Frame = -1 / +3
Query: 593 TVDPMXEPPLIIAXTVLSILAVXYPVDKVCCYVSDDGAAMLTFEALTETCLFARKWVPFC 414
T DP EPPL+ A T+LSILA YPV+K+ CYVSDDG A+LTFEA+ E FA WVPFC
Sbjct: 1020 TADPEKEPPLVTANTILSILAADYPVEKLSCYVSDDGGALLTFEAMAEAASFANVWVPFC 1199
Query: 413 KKHKIEPRAPEWYFAQKIDYLREKVHPEFVRERRAMKREYEEFKVHINTVAANSRK 246
+KH IEPR PE YF+ K D + KV +FV++RR +KREY+EFKV IN++ + R+
Sbjct: 1200 RKHDIEPRNPESYFSLKRDPYKNKVKQDFVKDRRRVKREYDEFKVRINSLPDSIRR 1367
Score = 80.3 bits (169), Expect(2) = 4e-059
Identities = 32/44 (72%), Positives = 38/44 (86%)
Frame = -1 / +3
Query: 134 DAGNKLPWLVYVSREKRPGHDHHKKAGALNALLRTSAILSNAPF 3
D +LP LVYVSREKRPG+DH+KKAGA+NAL+R SAI+SN PF
Sbjct: 1632 DVDIRLPLLVYVSREKRPGYDHNKKAGAMNALVRASAIMSNGPF 1763
Score = 73.5 bits (154), Expect(2) = 1e-021
Identities = 43/97 (44%), Positives = 50/97 (51%)
Frame = +1 / -3
Query: 268 VFM*TLNSSYSLFIARRSRTNSG*TFSLR*SIF*AKYHSGARGSILCFLQKGTHFRANRH 447
+F+ TLNSSYS F RRS T S T L S+F K SG GSI C QKGTH A
Sbjct: 1345 LFIRTLNSSYSRFTLRRSLTKSCFTLFL*GSLFKLK*DSGFLGSISCLRQKGTHTFAKLA 1166
Query: 448 XXXXXXXXXXXXXXXDT*QQTLSTG*XTASMDKTVXA 558
+T*Q++ STG* A +DK V A
Sbjct: 1165 ASAMASNVKSAPPSSET*QESFSTG*SAARIDKMVLA 1055
Score = 53.3 bits (110), Expect(2) = 1e-021
Identities = 25/38 (65%), Positives = 30/38 (78%)
Frame = +1 / -3
Query: 4 KGALERIAEVRSNAFKAPAFL**SCPGLFSRET*TNQG 117
KG L+ +AE R++AF APAFL *S PG FSRET*T+ G
Sbjct: 1762 KGPLDIMAEARTSAFMAPAFLL*S*PGRFSRET*TSNG 1649
>gb|DT473511.1|DT473511 WS01229.BR_N17 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01229_N17 5', mRNA sequence
Length = 912
Score = 183 bits (395), Expect = 6e-046
Identities = 72/87 (82%), Positives = 79/87 (90%)
Frame = -1 / +2
Query: 593 TVDPMXEPPLIIAXTVLSILAVXYPVDKVCCYVSDDGAAMLTFEALTETCLFARKWVPFC 414
TVDP+ EPPL+ A TVLSILAV YPVDKV CYVSDDGAAMLTFEA++ET FARKWVPFC
Sbjct: 647 TVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFEAISETSEFARKWVPFC 826
Query: 413 KKHKIEPRAPEWYFAQKIDYLREKVHP 333
KK+ IEPRAPEWYFAQKIDYL++KVHP
Sbjct: 827 KKYDIEPRAPEWYFAQKIDYLKDKVHP 907
>gb|CK101560.1|CK101560 F099P76.5pR Populus flower cDNA library Populus trichocarpa cDNA
clone F099P76 5', mRNA sequence
Length = 582
Score = 181 bits (389), Expect = 4e-045
Identities = 71/110 (64%), Positives = 88/110 (80%)
Frame = -1 / +2
Query: 575 EPPLIIAXTVLSILAVXYPVDKVCCYVSDDGAAMLTFEALTETCLFARKWVPFCKKHKIE 396
EPPL+ A T+LSILAV YPV+K+ CY+SDDG ++LTFEAL ET FAR WVPFC+KH IE
Sbjct: 23 EPPLVTANTILSILAVDYPVEKLACYLSDDGGSLLTFEALAETASFARIWVPFCRKHNIE 202
Query: 395 PRAPEWYFAQKIDYLREKVHPEFVRERRAMKREYEEFKVHINTVAANSRK 246
PR PE YF QK D+L+ KV +FVRERR +KREY+EFKV IN++ + R+
Sbjct: 203 PRNPEAYFGQKRDFLKNKVRLDFVRERRRVKREYDEFKVRINSLTESIRR 352
>gb|CF235713.1|CF235713 PtaJXT0026B7B0703 Poplar cDNA library from young tension xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 639
Score = 175 bits (377), Expect = 2e-043
Identities = 69/106 (65%), Positives = 82/106 (77%)
Frame = -1 / +2
Query: 320 ERRAMKREYEEFKVHINTVAANSRKVPEGGWSLPEGAPWHGNNVRDHAGMVQVITGNDCV 141
+RRAMKREYEEFKV IN + A ++KVP GW + +G PW GNN RDH GM+QV G+
Sbjct: 5 QRRAMKREYEEFKVRINAIVAKAQKVPTEGWIMQDGTPWPGNNTRDHPGMIQVFLGHSGG 184
Query: 140 MDDAGNKLPWLVYVSREKRPGHDHHKKAGALNALLRTSAILSNAPF 3
D GN+LP LVYVSREKRPG HHKKAGA+NAL+R SA+L+NAPF
Sbjct: 185 HDVEGNELPRLVYVSREKRPGFSHHKKAGAMNALIRVSAVLTNAPF 322
Score = 113 bits (242), Expect = 8e-025
Identities = 59/105 (56%), Positives = 64/105 (60%)
Frame = +1 / -1
Query: 4 KGALERIAEVRSNAFKAPAFL**SCPGLFSRET*TNQGSLFPASSMTQSLPVMTWTIPAW 183
KGAL AE R AF APAFL* PGLFSR+T T +GS FP++S P T IP
Sbjct: 321 KGALVSTAETRIRAFMAPAFL*CEKPGLFSRDTYTRRGSSFPSTSCPPL*PRNT*IIPG* 142
Query: 184 SRTLFPCHGAPSGRDHPPSGTLRELAATVFM*TLNSSYSLFIARR 318
S LFP HG PS HP GT A F+ TLNSSYSLFIARR
Sbjct: 141 SLVLFPGHGVPSCIIHPSVGTFCAFATIAFIRTLNSSYSLFIARR 7
>gb|CK091431.1|CK091431 F099P76.3pR Populus flower cDNA library Populus trichocarpa cDNA
clone F099P76 3', mRNA sequence
Length = 668
Score = 166 bits (357), Expect = 1e-040
Identities = 65/110 (59%), Positives = 84/110 (76%)
Frame = -1 / -2
Query: 575 EPPLIIAXTVLSILAVXYPVDKVCCYVSDDGAAMLTFEALTETCLFARKWVPFCKKHKIE 396
EPPL+ A T+L I+AV YPV+++ CY+SDDG ++LTFEAL ET FAR WVP C+ H I
Sbjct: 646 EPPLVTANTIL*IVAVDYPVEELACYLSDDGGSLLTFEALDETASFARIWVPLCRTHNIA 467
Query: 395 PRAPEWYFAQKIDYLREKVHPEFVRERRAMKREYEEFKVHINTVAANSRK 246
PR PE YF QK D+L+ KV +FVRERR +KREY+EFKV IN++ + R+
Sbjct: 466 PRTPEAYFGQKRDFLKNKVRLDFVRERRRVKREYDEFKVRINSLTESIRR 317
>gb|BI130668.1|BI130668 G109P08Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 336
Score = 163 bits (351), Expect = 7e-040
Identities = 63/87 (72%), Positives = 75/87 (86%)
Frame = -1 / +3
Query: 593 TVDPMXEPPLIIAXTVLSILAVXYPVDKVCCYVSDDGAAMLTFEALTETCLFARKWVPFC 414
TVDP+ EPP+I A TVLSIL+V PVD+V CYVSDDGA+ML F++L ET FAR+WVPFC
Sbjct: 75 TVDPLKEPPIITANTVLSILSVEDPVDEVSCYVSDDGASMLLFDSLAETAEFARRWVPFC 254
Query: 413 KKHKIEPRAPEWYFAQKIDYLREKVHP 333
KKH IEPRAPE+YF QKIDYL+++VHP
Sbjct: 255 KKHNIEPRAPEFYFTQKIDYLKDRVHP 335
>gb|BI138150.1|BI138150 F099P76Y Populus flower cDNA library Populus trichocarpa cDNA, mRNA
sequence
Length = 452
Score = 157 bits (337), Expect = 6e-038
Identities = 62/93 (66%), Positives = 74/93 (79%)
Frame = -1 / +3
Query: 575 EPPLIIAXTVLSILAVXYPVDKVCCYVSDDGAAMLTFEALTETCLFARKWVPFCKKHKIE 396
EPPL+ A T+LSILAV YPV+K+ CY+SDDG ++LTFEAL ET FAR WVPFC+KH IE
Sbjct: 24 EPPLVTANTILSILAVDYPVEKLACYLSDDGGSLLTFEALAETASFARIWVPFCRKHNIE 203
Query: 395 PRAPEWYFAQKIDYLREKVHPEFVRERRAMKRE 297
PR PE YF QK D+L+ KV +FVRERR + RE
Sbjct: 204 PRNPEAYFGQKRDFLKNKVRLDFVRERRRVTRE 302
>gb|CF236447.1|CF236447 PtaJXT2H2H0216 Poplar cDNA library from young tension xylem Populus
alba x Populus tremula cDNA 5', mRNA sequence
Length = 637
Score = 139 bits (299), Expect = 1e-032
Identities = 53/83 (63%), Positives = 66/83 (79%)
Frame = -1 / +2
Query: 593 TVDPMXEPPLIIAXTVLSILAVXYPVDKVCCYVSDDGAAMLTFEALTETCLFARKWVPFC 414
TVDPM EPPL+ T+LSILA+ YPV+K+ CY+SDDGA+M TF A++ T FAR WVPFC
Sbjct: 386 TVDPMKEPPLVTGNTILSILAMDYPVEKISCYLSDDGASMCTFXAMSXTAEFARXWVPFC 565
Query: 413 KKHKIEPRAPEWYFAQKIDYLRE 345
+ I PRAPE+YFA KIDYL++
Sbjct: 566 XXYSIXPRAPEFYFALKIDYLKD 634
>gb|CA931952.1|CA931952 MTU4TA.P25.A10 Aspen apex cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 629
Score = 123 bits (263), Expect = 1e-027
Identities = 47/76 (61%), Positives = 56/76 (73%)
Frame = -1 / -3
Query: 230 WSLPEGAPWHGNNVRDHAGMVQVITGNDCVMDDAGNKLPWLVYVSREKRPGHDHHKKAGA 51
W + +G PW NN RDH GM+QV G +D GN+LP LVYVSREKRPG HHKKAGA
Sbjct: 627 WIMQDGTPWPXNNTRDHPGMIQVFLGQSGGLDTDGNELPRLVYVSREKRPGFQHHKKAGA 448
Query: 50 LNALLRTSAILSNAPF 3
+NAL+R SA+L+N PF
Sbjct: 447 MNALVRVSAVLTNGPF 400
>gb|CV228438.1|CV228438 WS01910.B21_B15 PT-DX-N-A-10 Populus trichocarpa cDNA clone
WS01910_B15 3', mRNA sequence
Length = 677
Score = 120 bits (256), Expect = 9e-027
Identities = 45/65 (69%), Positives = 55/65 (84%)
Frame = -1 / -1
Query: 593 TVDPMXEPPLIIAXTVLSILAVXYPVDKVCCYVSDDGAAMLTFEALTETCLFARKWVPFC 414
TVDPM EPPL+ T+LSILA+ YPV+K+ CY+SDDGA+M TFEA++ET FARKWVPFC
Sbjct: 197 TVDPMKEPPLVTGNTILSILAMDYPVEKISCYLSDDGASMCTFEAMSETAEFARKWVPFC 18
Query: 413 KKHKI 399
KK+ I
Sbjct: 17 KKYSI 3
>gb|DT505698.1|DT505698 WS01811.C21_J23 PTxD-IL-N-A-9 Populus trichocarpa x Populus
deltoides cDNA clone WS01811_J23 3', mRNA sequence
Length = 837
Score = 91.8 bits (194), Expect(2) = 2e-026
Identities = 35/74 (47%), Positives = 46/74 (62%)
Frame = -1 / -2
Query: 593 TVDPMXEPPLIIAXTVLSILAVXYPVDKVCCYVSDDGAAMLTFEALTETCLFARKWVPFC 414
T DP EPP+ + T LS++A YP +K+ Y+SDDG + LT A E FA W+PFC
Sbjct: 764 TADPYKEPPIGVVNTALSVMAYDYPTEKISVYISDDGGSALTLFAFMEAAKFATHWLPFC 585
Query: 413 KKHKIEPRAPEWYF 372
KK+ I R+PE F
Sbjct: 584 KKNNILERSPEALF 543
Score = 49.2 bits (101), Expect(2) = 2e-026
Identities = 22/51 (43%), Positives = 30/51 (58%)
Frame = -1 / -2
Query: 188 RDHAGMVQVITGNDCVMDDAGNKLPWLVYVSREKRPGHDHHKKAGALNALL 36
+DH ++QV+ D G +P L+Y+SR K HH KAGALNAL+
Sbjct: 374 QDHPAVIQVLLDASKDKDIDGCLMPNLIYISRGKSKASPHHFKAGALNALV 222
>gb|CA926289.1|CA926289 MTU6CR.P13.C05 Aspen root cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 429
Score = 117 bits (250), Expect = 6e-026
Identities = 45/69 (65%), Positives = 56/69 (81%)
Frame = -1 / +1
Query: 209 PWHGNNVRDHAGMVQVITGNDCVMDDAGNKLPWLVYVSREKRPGHDHHKKAGALNALLRT 30
PW GN RDH GM+QV G++ +D G +LP LVYVSREKRPG++HHKKAGA+NAL+R
Sbjct: 1 PWPGNITRDHPGMIQVYLGSEGALDVEGKELPRLVYVSREKRPGYNHHKKAGAMNALIRV 180
Query: 29 SAILSNAPF 3
SA+L+NAPF
Sbjct: 181 SAVLTNAPF 207
>gb|DT477686.1|DT477686 WS02520.BR_K21 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02520_K21 5', mRNA sequence
Length = 837
Score = 112 bits (239), Expect = 2e-024
Identities = 41/78 (52%), Positives = 55/78 (70%)
Frame = -1 / +3
Query: 593 TVDPMXEPPLIIAXTVLSILAVXYPVDKVCCYVSDDGAAMLTFEALTETCLFARKWVPFC 414
T DP+ EPP++ TV+S+LAV YP DK+ CYVSDDG + T+ +L E FA+ W PFC
Sbjct: 330 TADPVLEPPILTVNTVISLLAVDYPADKLACYVSDDGCSPTTYYSLVEASKFAKLWAPFC 509
Query: 413 KKHKIEPRAPEWYFAQKI 360
KKH I+ RAP YF+ ++
Sbjct: 510 KKHNIQVRAPFRYFSSEV 563
>gb|DT482749.1|DT482749 WS02520.B21_K21 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02520_K21 3', mRNA sequence
Length = 838
Score = 112 bits (239), Expect = 2e-024
Identities = 41/78 (52%), Positives = 55/78 (70%)
Frame = -1 / -3
Query: 593 TVDPMXEPPLIIAXTVLSILAVXYPVDKVCCYVSDDGAAMLTFEALTETCLFARKWVPFC 414
T DP+ EPP++ TV+S+LAV YP DK+ CYVSDDG + T+ +L E FA+ W PFC
Sbjct: 509 TADPVLEPPILTVNTVISLLAVDYPADKLACYVSDDGCSPTTYYSLVEASKFAKLWAPFC 330
Query: 413 KKHKIEPRAPEWYFAQKI 360
KKH I+ RAP YF+ ++
Sbjct: 329 KKHNIQVRAPFRYFSSEV 276
>gb|DT507488.1|DT507488 WS02418.BR_G10 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02418_G10 5', mRNA sequence
Length = 855
Score = 101 bits (216), Expect = 3e-021
Identities = 42/99 (42%), Positives = 57/99 (57%)
Frame = -1 / +3
Query: 593 TVDPMXEPPLIIAXTVLSILAVXYPVDKVCCYVSDDGAAMLTFEALTETCLFARKWVPFC 414
T DP EPP+ + T LS++A YP +K+ YVSDDG + LT A E FA W+PFC
Sbjct: 363 TADPYKEPPISVVNTALSVMAYDYPTEKISVYVSDDGGSALTLFAFMEASKFATHWLPFC 542
Query: 413 KKHKIEPRAPEWYFAQKIDYLREKVHPEFVRERRAMKRE 297
KK+ I+ R+PE YF E V+ + + E +K E
Sbjct: 543 KKNNIQERSPEAYFELNHTCTSEAVNIKIIYESMRVKVE 659
>gb|DT512116.1|DT512116 WS02418.B21_G10 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02418_G10 3', mRNA sequence
Length = 845
Score = 101 bits (216), Expect = 3e-021
Identities = 42/99 (42%), Positives = 57/99 (57%)
Frame = -1 / -2
Query: 593 TVDPMXEPPLIIAXTVLSILAVXYPVDKVCCYVSDDGAAMLTFEALTETCLFARKWVPFC 414
T DP EPP+ + T LS++A YP +K+ YVSDDG + LT A E FA W+PFC
Sbjct: 601 TADPYKEPPISVVNTALSVMAYDYPTEKISVYVSDDGGSALTLFAFMEASKFATHWLPFC 422
Query: 413 KKHKIEPRAPEWYFAQKIDYLREKVHPEFVRERRAMKRE 297
KK+ I+ R+PE YF E V+ + + E +K E
Sbjct: 421 KKNNIQERSPEAYFELNHTCTSEAVNIKIIYESMRVKVE 305
Database: Populus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:49 PM
Number of letters in database: 203,408,664
Number of sequences in database: 369,679
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 292,699,748
Number of Sequences: 369679
Number of extensions: 4112253
Number of successful extensions: 50417
Number of sequences better than 1.0e-020: 45
length of database: 67,802,888
effective HSP length: 51
effective length of database: 48,949,259
effective search space used: 7146591814
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)