TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QCI2h07.yg.2.1
(286 letters)
Database: Populus_nucl_with_EST.fasta
369,679 sequences; 203,408,664 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AY196961.1| Populus tremuloides cellulose synthase 6 (Ce... 166 4e-041
gb|BI127743.1|BI127743 G065P23Y Populus cambium cDNA librar... 151 9e-037
gb|BI128874.1|BI128874 G082P82Y Populus cambium cDNA librar... 151 9e-037
gb|CN520055.1|CN520055 GQ0105.B3_H23 GQ010 Populus trichoca... 151 9e-037
gb|AF527387.1| Populus tremuloides xylem-specific cellulose... 151 9e-037
gb|AY573575.1| Populus tremula x Populus tremuloides cellul... 151 9e-037
gb|AY162180.1| Populus tremuloides cellulose synthase (CesA... 151 9e-037
gb|AJ774508.1|AJ774508 AJ774508 Populus euphratica shoot 3-... 150 2e-036
gb|CV225888.1|CV225888 WS0162.B21_K19 PT-DX-A-7 Populus tri... 149 3e-036
gb|AY573571.1| Populus tremula x Populus tremuloides cellul... 149 3e-036
gb|AI162850.1|AI162850 A025P50U Hybrid aspen plasmid librar... 149 3e-036
gb|CF233341.1|CF233341 PtaJXO0022B5B0503 Poplar cDNA librar... 149 3e-036
gb|CF235304.1|CF235304 PtaJXT0021C1C0105 Poplar cDNA librar... 149 3e-036
gb|CN524029.1|CN524029 GQ015M07.T3_H06 GQ015 Populus tricho... 149 3e-036
gb|CN524680.1|CN524680 GQ015M13.T3_D10 GQ015 Populus tricho... 149 3e-036
gb|CV225435.1|CV225435 WS0161.B21_G07 PT-DX-A-7 Populus tri... 149 3e-036
gb|CV226017.1|CV226017 WS0163.B21_A20 PT-DX-A-7 Populus tri... 149 3e-036
gb|CV226195.1|CV226195 WS0163.B21_J02 PT-DX-A-7 Populus tri... 149 3e-036
gb|CV268970.1|CV268970 WS0206.B21_P09 PTxN-IB-N-A-11 Populu... 149 3e-036
gb|CF232388.1|CF232388 PtaJXO0009H2H0216 Poplar cDNA librar... 149 4e-036
gb|CK087778.1|CK087778 A020P56.3pR Hybrid aspen plasmid lib... 149 4e-036
gb|CN550567.1|CN550567 GQ0241.B3_I15 GQ024 Populus trichoca... 149 4e-036
gb|DT487943.1|DT487943 WS02535.B21_B11 PT-MB-N-A-15 Populus... 149 4e-036
gb|AY573572.1| Populus tremula x Populus tremuloides cellul... 149 4e-036
gb|BP931353.1|BP931353 BP931353 full-length enriched poplar... 146 3e-035
gb|AY095297.1| Populus tremuloides cellulose synthase (CesA... 146 3e-035
gb|BU896705.1|BU896705 X044E08 Populus wood cDNA library Po... 143 4e-034
gb|CN549469.1|CN549469 GQ0241.B3_B20 GQ024 Populus trichoca... 143 4e-034
gb|AY573573.2| Populus tremula x Populus tremuloides cellul... 143 4e-034
gb|AF081534.1|AF081534 Populus x canescens cellulose syntha... 142 7e-034
gb|CF229187.1|CF229187 PtaXM0022D10D1008 Poplar cDNA librar... 141 1e-033
gb|CF232848.1|CF232848 PtaJXO0016E6E0610 Poplar cDNA librar... 141 1e-033
gb|CF235000.1|CF235000 PtaJXT0017F7F0711 Poplar cDNA librar... 141 1e-033
gb|AY573574.1| Populus tremula x Populus tremuloides cellul... 141 1e-033
gb|CF234438.1|CF234438 Ptajxojxo2F10F1012 Poplar cDNA libra... 81 2e-033
gb|CK318639.1|CK318639 X9P01f01 Populus stem seasonal libra... 140 3e-033
gb|AJ775532.1|AJ775532 AJ775532 Populus euphratica shoot 3-... 140 3e-033
gb|CV227633.1|CV227633 WS0167.B21_M03 PT-DX-A-7 Populus tri... 100 7e-033
gb|DT500468.1|DT500468 PX0015.BR_I21 PT-X-FL-A-1 Populus tr... 78 5e-032
gb|DT493063.1|DT493063 WS02553.C21_E11 PT-MB-N-A-15 Populus... 78 6e-032
gb|CF236377.1|CF236377 PtaJXT2B10B1004 Poplar cDNA library ... 135 6e-032
gb|CF228734.1|CF228734 PtaXM0016G4G0414 Poplar cDNA library... 135 8e-032
gb|AY162181.1| Populus tremuloides cellulose synthase (CesA... 78 1e-031
gb|AY055724.2| Populus tremuloides cellulose synthase (CesA... 79 1e-031
gb|AJ778410.1|AJ778410 AJ778410 Populus euphratica cambium ... 79 1e-031
gb|CV272431.1|CV272431 WS0157.B21_K08 PTxN-IB-A-6 Populus t... 95 2e-031
gb|CK088642.1|CK088642 A064P24.3pR Hybrid aspen plasmid lib... 131 1e-030
gb|CK092990.1|CK092990 G103P13.3pR Populus tension wood cDN... 131 1e-030
gb|AJ777820.1|AJ777820 AJ777820 Populus euphratica root 3-6... 79 2e-030
gb|DT475055.1|DT475055 WS0125.BR_N16 PT-GT-FL-A-3 Populus t... 100 3e-030
gb|BI128528.1|BI128528 G077P53Y Populus cambium cDNA librar... 129 4e-030
gb|DT476519.1|DT476519 WS01229.B21_N17 PT-GT-FL-A-3 Populus... 79 9e-030
gb|CF229740.1|CF229740 PtaXM0029A6A0602 Poplar cDNA library... 128 1e-029
gb|CK320732.1|CK320732 X9SP01b11 Populus stem seasonal libr... 74 2e-029
gb|CF232642.1|CF232642 PtaJXO0013H5H0515 Poplar cDNA librar... 73 1e-028
gb|CV273266.1|CV273266 WS01710.B21_E12 PTxD-NR-A-8 Populus ... 124 2e-028
gb|CV275252.1|CV275252 WS0175.B21_N18 PTxD-NR-A-8 Populus t... 124 2e-028
gb|CF228576.1|CF228576 PtaXM0014G2G0214 Poplar cDNA library... 120 2e-027
gb|DT509821.1|DT509821 WS02424.BR_N10 PTxD-ICC-N-A-14 Popul... 79 5e-027
gb|AF072131.1|AF072131 Populus tremuloides secondary xylem ... 94 6e-027
gb|DQ004570.1| Populus tomentosa cellulose synthase (cesa1)... 94 6e-027
gb|CN519879.1|CN519879 GQ0108.B3_I06 GQ010 Populus trichoca... 77 2e-026
gb|DN493622.1|DN493622 G071P10.5pR Populus tension wood cDN... 100 2e-026
gb|DV466097.1|DV466097 MTUNUL1.P47.C03 NUL Populus fremonti... 78 3e-025
gb|BU895092.1|BU895092 X019B09 Populus wood cDNA library Po... 112 5e-025
gb|CF235953.1|CF235953 PtaJXT0028H7H0715 Poplar cDNA librar... 111 2e-024
gb|AI164546.1|AI164546 A064p24u Hybrid aspen plasmid librar... 110 2e-024
gb|BI128887.1|BI128887 G083P04Y Populus cambium cDNA librar... 108 8e-024
gb|BU894855.1|BU894855 X016A07 Populus wood cDNA library Po... 73 2e-023
gb|BU897587.1|BU897587 X060B01 Populus wood cDNA library Po... 103 5e-023
gb|CF229283.1|CF229283 PtaXM0023E4E0410 Poplar cDNA library... 79 7e-023
gb|CK102126.1|CK102126 G065P23.5pR Populus tension wood cDN... 100 8e-023
gb|CK093129.1|CK093129 G109P08.3pR Populus tension wood cDN... 103 1e-022
gb|CK318662.1|CK318662 X9P01h06 Populus stem seasonal libra... 103 4e-022
gb|AI162413.1|AI162413 A017P22U Hybrid aspen plasmid librar... 100 3e-021
gb|CF228459.1|CF228459 PtaXM0013C2C0206 Poplar cDNA library... 98 4e-021
gb|CA925680.1|CA925680 MTU7TL.P4.E11 Aspen leaf cDNA Librar... 78 8e-021
gb|CV242542.1|CV242542 WS02515.B21_F16 PT-MB-N-A-15 Populus... 76 1e-020
>gb|AY196961.1| Populus tremuloides cellulose synthase 6 (CesA6) mRNA, complete cds
Length = 3773
Score = 166 bits (357), Expect = 4e-041
Identities = 66/92 (71%), Positives = 72/92 (78%)
Frame = +3 / +2
Query: 9 QFWXIGGVSSHLFAVFQGLLKXIAGVDTSFTVTSKGGDDEEFSELYTFKWXXXXXXXXXX 188
QFW IGGVS+HLFAVFQGLLK +AGVDT+FTVTSKGGDD+EFSELY FKW
Sbjct: 2858 QFWVIGGVSAHLFAVFQGLLKVLAGVDTNFTVTSKGGDDDEFSELYAFKWTTLLIPPTTL 3037
Query: 189 XXXNFIGVVAGIXNAIXXGYESWGPLFGKLFF 284
N +GVVAG+ NAI GYESWGPLFGKLFF
Sbjct: 3038 LIINLVGVVAGVSNAINNGYESWGPLFGKLFF 3133
Score = 132 bits (282), Expect = 2e-030
Identities = 55/93 (59%), Positives = 56/93 (60%)
Frame = -1 / -3
Query: 286 AKKSFPNRGPHDSYPXXIAXXMPATTPMKFXXXXXXXXXXXXVHLNVXXXXXXXXSPPLD 107
AKKS PNRGPHDSYP IA PATTP +F VHLN SPPLD
Sbjct: 3135 AKKSLPNRGPHDSYPLFIAFETPATTPTRFIISNVVGGMSNVVHLNAYSSENSSSSPPLD 2956
Query: 106 VTVKLVSTPAXXLSSPWNTAKRCEDTPPXXQNC 8
VTVK VSTPA SPWNTA RC DTPP QNC
Sbjct: 2955 VTVKFVSTPARTFKSPWNTANRCADTPPITQNC 2857
>gb|BI127743.1|BI127743 G065P23Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 502
Score = 151 bits (325), Expect = 9e-037
Identities = 60/92 (65%), Positives = 68/92 (73%)
Frame = +3 / +3
Query: 9 QFWXIGGVSSHLFAVFQGLLKXIAGVDTSFTVTSKGGDDEEFSELYTFKWXXXXXXXXXX 188
QFW IGGVSSHLFA+FQGLLK +AGV T+FTVTSKG DD EFSELY FKW
Sbjct: 51 QFWVIGGVSSHLFALFQGLLKVLAGVSTNFTVTSKGADDGEFSELYIFKWTSLLIPPTTL 230
Query: 189 XXXNFIGVVAGIXNAIXXGYESWGPLFGKLFF 284
N +GVV G+ +AI GY+SWGPLFG+LFF
Sbjct: 231 LIMNIVGVVVGVSDAINNGYDSWGPLFGRLFF 326
Score = 106 bits (227), Expect = 6e-023
Identities = 45/93 (48%), Positives = 50/93 (53%)
Frame = -1 / -1
Query: 286 AKKSFPNRGPHDSYPXXIAXXMPATTPMKFXXXXXXXXXXXXVHLNVXXXXXXXXSPPLD 107
AK S PN GPH+SYP +A P TTP F VHLN+ S P D
Sbjct: 328 AKNSLPNNGPHESYPLLMASETPTTTPTMFMINNVVGGINSDVHLNM*SSENSPSSAPFD 149
Query: 106 VTVKLVSTPAXXLSSPWNTAKRCEDTPPXXQNC 8
VTVK V TPA LS PW A RC++TPP QNC
Sbjct: 148 VTVKFVLTPAKTLSKPWKRANRCDETPPITQNC 50
>gb|BI128874.1|BI128874 G082P82Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 450
Score = 151 bits (325), Expect = 9e-037
Identities = 60/92 (65%), Positives = 68/92 (73%)
Frame = +3 / +3
Query: 9 QFWXIGGVSSHLFAVFQGLLKXIAGVDTSFTVTSKGGDDEEFSELYTFKWXXXXXXXXXX 188
QFW IGGVSSHLFA+FQGLLK +AGV T+FTVTSKG DD EFSELY FKW
Sbjct: 51 QFWVIGGVSSHLFALFQGLLKVLAGVSTNFTVTSKGADDGEFSELYIFKWTSLLIPPTTL 230
Query: 189 XXXNFIGVVAGIXNAIXXGYESWGPLFGKLFF 284
N +GVV G+ +AI GY+SWGPLFG+LFF
Sbjct: 231 LIMNIVGVVVGVSDAINNGYDSWGPLFGRLFF 326
Score = 106 bits (227), Expect = 6e-023
Identities = 45/93 (48%), Positives = 50/93 (53%)
Frame = -1 / -3
Query: 286 AKKSFPNRGPHDSYPXXIAXXMPATTPMKFXXXXXXXXXXXXVHLNVXXXXXXXXSPPLD 107
AK S PN GPH+SYP +A P TTP F VHLN+ S P D
Sbjct: 328 AKNSLPNNGPHESYPLLMASETPTTTPTMFMINNVVGGINSDVHLNM*SSENSPSSAPFD 149
Query: 106 VTVKLVSTPAXXLSSPWNTAKRCEDTPPXXQNC 8
VTVK V TPA LS PW A RC++TPP QNC
Sbjct: 148 VTVKFVLTPAKTLSKPWKRANRCDETPPITQNC 50
>gb|CN520055.1|CN520055 GQ0105.B3_H23 GQ010 Populus trichocarpa x Populus deltoides cDNA
clone GQ0105_H23 5', mRNA sequence
Length = 833
Score = 151 bits (325), Expect = 9e-037
Identities = 60/92 (65%), Positives = 68/92 (73%)
Frame = +3 / +2
Query: 9 QFWXIGGVSSHLFAVFQGLLKXIAGVDTSFTVTSKGGDDEEFSELYTFKWXXXXXXXXXX 188
QFW IGGVSSHLFA+FQGLLK +AGV T+FTVTSKG DD EFSELY FKW
Sbjct: 71 QFWVIGGVSSHLFALFQGLLKVLAGVSTNFTVTSKGADDGEFSELYIFKWTSLLIPPTTL 250
Query: 189 XXXNFIGVVAGIXNAIXXGYESWGPLFGKLFF 284
N +GVV G+ +AI GY+SWGPLFG+LFF
Sbjct: 251 LIMNIVGVVVGVSDAINNGYDSWGPLFGRLFF 346
Score = 106 bits (227), Expect = 6e-023
Identities = 45/93 (48%), Positives = 50/93 (53%)
Frame = -1 / -3
Query: 286 AKKSFPNRGPHDSYPXXIAXXMPATTPMKFXXXXXXXXXXXXVHLNVXXXXXXXXSPPLD 107
AK S PN GPH+SYP +A P TTP F VHLN+ S P D
Sbjct: 348 AKNSLPNNGPHESYPLLMASETPTTTPTMFMINNVVGGINSDVHLNM*SSENSPSSAPFD 169
Query: 106 VTVKLVSTPAXXLSSPWNTAKRCEDTPPXXQNC 8
VTVK V TPA LS PW A RC++TPP QNC
Sbjct: 168 VTVKFVLTPAKTLSKPWKRANRCDETPPITQNC 70
>gb|AF527387.1| Populus tremuloides xylem-specific cellulose synthase (CesA3) mRNA,
complete cds
Length = 3401
Score = 151 bits (325), Expect = 9e-037
Identities = 61/92 (66%), Positives = 67/92 (72%)
Frame = +3 / +3
Query: 9 QFWXIGGVSSHLFAVFQGLLKXIAGVDTSFTVTSKGGDDEEFSELYTFKWXXXXXXXXXX 188
QFW IGGVS+HLFAVFQGLLK +AGVDT+FTVTSK DD EF ELY FKW
Sbjct: 2700 QFWVIGGVSAHLFAVFQGLLKVLAGVDTNFTVTSKSADDAEFGELYLFKWTTLLIPPTTL 2879
Query: 189 XXXNFIGVVAGIXNAIXXGYESWGPLFGKLFF 284
N +GVVAG+ +AI GY SWGPLFGKLFF
Sbjct: 2880 IILNMVGVVAGVSDAINNGYGSWGPLFGKLFF 2975
Score = 105 bits (223), Expect = 2e-022
Identities = 48/93 (51%), Positives = 50/93 (53%)
Frame = -1 / -2
Query: 286 AKKSFPNRGPHDSYPXXIAXXMPATTPMKFXXXXXXXXXXXXVHLNVXXXXXXXXSPPLD 107
AK SFPN+GPHD YP IA PATTP F VHL S D
Sbjct: 2977 AKNSFPNKGPHDPYPLFIASDTPATTPTIFKMIRVVGGMRRVVHLKRYSSPNSASSADFD 2798
Query: 106 VTVKLVSTPAXXLSSPWNTAKRCEDTPPXXQNC 8
VTVKLVSTPA L PW TAKR +TPP QNC
Sbjct: 2797 VTVKLVSTPARTLRRPWKTAKR*AETPPITQNC 2699
>gb|AY573575.1| Populus tremula x Populus tremuloides cellulose synthase (CesA4)
mRNA, complete cds
Length = 3778
Score = 151 bits (325), Expect = 9e-037
Identities = 60/92 (65%), Positives = 68/92 (73%)
Frame = +3 / +1
Query: 9 QFWXIGGVSSHLFAVFQGLLKXIAGVDTSFTVTSKGGDDEEFSELYTFKWXXXXXXXXXX 188
QFW IGGVSSHLFA+FQGLLK +AGV T+FTVTSKG DD EFSELY FKW
Sbjct: 3022 QFWVIGGVSSHLFALFQGLLKVLAGVSTNFTVTSKGADDGEFSELYIFKWTSLLIPPTTL 3201
Query: 189 XXXNFIGVVAGIXNAIXXGYESWGPLFGKLFF 284
N +GVV G+ +AI GY+SWGPLFG+LFF
Sbjct: 3202 LIMNIVGVVVGVSDAINNGYDSWGPLFGRLFF 3297
Score = 106 bits (227), Expect = 6e-023
Identities = 45/93 (48%), Positives = 50/93 (53%)
Frame = -1 / -3
Query: 286 AKKSFPNRGPHDSYPXXIAXXMPATTPMKFXXXXXXXXXXXXVHLNVXXXXXXXXSPPLD 107
AK S PN GPH+SYP +A P TTP F VHLN+ S P D
Sbjct: 3299 AKNSLPNNGPHESYPLLMASETPTTTPTMFMINNVVGGINSDVHLNM*SSENSPSSAPFD 3120
Query: 106 VTVKLVSTPAXXLSSPWNTAKRCEDTPPXXQNC 8
VTVK V TPA LS PW A RC++TPP QNC
Sbjct: 3119 VTVKFVLTPAKTLSKPWKRANRCDETPPITQNC 3021
>gb|AY162180.1| Populus tremuloides cellulose synthase (CesA7) mRNA, complete cds
Length = 3809
Score = 151 bits (325), Expect = 9e-037
Identities = 60/92 (65%), Positives = 68/92 (73%)
Frame = +3 / +3
Query: 9 QFWXIGGVSSHLFAVFQGLLKXIAGVDTSFTVTSKGGDDEEFSELYTFKWXXXXXXXXXX 188
QFW IGGVSSHLFA+FQGLLK +AGV T+FTVTSKG DD EFSELY FKW
Sbjct: 2988 QFWVIGGVSSHLFALFQGLLKVLAGVSTNFTVTSKGADDGEFSELYIFKWTSLLIPPTTL 3167
Query: 189 XXXNFIGVVAGIXNAIXXGYESWGPLFGKLFF 284
N +GVV G+ +AI GY+SWGPLFG+LFF
Sbjct: 3168 LIMNIVGVVVGVSDAINNGYDSWGPLFGRLFF 3263
Score = 106 bits (227), Expect = 6e-023
Identities = 45/93 (48%), Positives = 50/93 (53%)
Frame = -1 / -2
Query: 286 AKKSFPNRGPHDSYPXXIAXXMPATTPMKFXXXXXXXXXXXXVHLNVXXXXXXXXSPPLD 107
AK S PN GPH+SYP +A P TTP F VHLN+ S P D
Sbjct: 3265 AKNSLPNNGPHESYPLLMASETPTTTPTMFMINNVVGGINSDVHLNM*SSENSPSSAPFD 3086
Query: 106 VTVKLVSTPAXXLSSPWNTAKRCEDTPPXXQNC 8
VTVK V TPA LS PW A RC++TPP QNC
Sbjct: 3085 VTVKFVLTPAKTLSKPWKRANRCDETPPITQNC 2987
>gb|AJ774508.1|AJ774508 AJ774508 Populus euphratica shoot 3-6 months Populus euphratica
cDNA clone P0000300021B12F1, mRNA sequence
Length = 655
Score = 150 bits (323), Expect = 2e-036
Identities = 59/92 (64%), Positives = 68/92 (73%)
Frame = +3 / +1
Query: 9 QFWXIGGVSSHLFAVFQGLLKXIAGVDTSFTVTSKGGDDEEFSELYTFKWXXXXXXXXXX 188
QFW IGGVS+HLFAV QGLLK +AG+DT+FTVTSK DDE+F ELY FKW
Sbjct: 163 QFWVIGGVSAHLFAVVQGLLKVLAGIDTNFTVTSKATDDEDFGELYAFKWTTLLIPPTTI 342
Query: 189 XXXNFIGVVAGIXNAIXXGYESWGPLFGKLFF 284
N +GVVAG+ +AI GY+SWGPLFGKLFF
Sbjct: 343 LIINLVGVVAGVSDAINNGYQSWGPLFGKLFF 438
Score = 104 bits (222), Expect = 3e-022
Identities = 47/93 (50%), Positives = 49/93 (52%)
Frame = -1 / -3
Query: 286 AKKSFPNRGPHDSYPXXIAXXMPATTPMKFXXXXXXXXXXXXVHLNVXXXXXXXXSPPLD 107
AKKSFPNRGPHD YP +A PATTP + VHL S LD
Sbjct: 440 AKKSFPNRGPHDWYPLFMASETPATTPTRLMIKIVVGGISRVVHLKAYSSPKSSSSVALD 261
Query: 106 VTVKLVSTPAXXLSSPWNTAKRCEDTPPXXQNC 8
VTVK VS PA PW TAKR DTPP QNC
Sbjct: 260 VTVKFVSIPAKTFRRPWTTAKR*ADTPPITQNC 162
>gb|CV225888.1|CV225888 WS0162.B21_K19 PT-DX-A-7 Populus trichocarpa cDNA clone WS0162_K19
3', mRNA sequence
Length = 883
Score = 149 bits (321), Expect = 3e-036
Identities = 60/92 (65%), Positives = 66/92 (71%)
Frame = +3 / -2
Query: 9 QFWXIGGVSSHLFAVFQGLLKXIAGVDTSFTVTSKGGDDEEFSELYTFKWXXXXXXXXXX 188
QFW IGGVS+HLFAVFQGLLK + GVDT+FTVTSK DD EF ELY FKW
Sbjct: 693 QFWVIGGVSAHLFAVFQGLLKVLGGVDTNFTVTSKSADDAEFGELYLFKWTTLLIPPTTL 514
Query: 189 XXXNFIGVVAGIXNAIXXGYESWGPLFGKLFF 284
N +GVVAG+ +AI GY SWGPLFGKLFF
Sbjct: 513 IILNMVGVVAGVSDAINNGYGSWGPLFGKLFF 418
Score = 102 bits (218), Expect = 1e-021
Identities = 47/93 (50%), Positives = 49/93 (52%)
Frame = -1 / +2
Query: 286 AKKSFPNRGPHDSYPXXIAXXMPATTPMKFXXXXXXXXXXXXVHLNVXXXXXXXXSPPLD 107
AK SFPN+GPHD YP IA PATTP F VHL S D
Sbjct: 416 AKNSFPNKGPHDPYPLFIASDTPATTPTIFKMIRVVGGMRRVVHLKRYSSPNSASSADFD 595
Query: 106 VTVKLVSTPAXXLSSPWNTAKRCEDTPPXXQNC 8
VTVKLVSTP L PW TAKR +TPP QNC
Sbjct: 596 VTVKLVSTPPRTLRRPWKTAKR*AETPPITQNC 694
>gb|AY573571.1| Populus tremula x Populus tremuloides cellulose synthase (CesA1)
mRNA, complete cds
Length = 3472
Score = 149 bits (321), Expect = 3e-036
Identities = 60/92 (65%), Positives = 66/92 (71%)
Frame = +3 / +3
Query: 9 QFWXIGGVSSHLFAVFQGLLKXIAGVDTSFTVTSKGGDDEEFSELYTFKWXXXXXXXXXX 188
QFW IGGVS+HLFAVFQGLLK + GVDT+FTVTSK DD EF ELY FKW
Sbjct: 2772 QFWVIGGVSAHLFAVFQGLLKVLGGVDTNFTVTSKSADDAEFGELYLFKWTTLLIPPTTL 2951
Query: 189 XXXNFIGVVAGIXNAIXXGYESWGPLFGKLFF 284
N +GVVAG+ +AI GY SWGPLFGKLFF
Sbjct: 2952 IILNMVGVVAGVSDAINNGYGSWGPLFGKLFF 3047
>gb|AI162850.1|AI162850 A025P50U Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA 5', mRNA sequence
Length = 464
Score = 149 bits (321), Expect = 3e-036
Identities = 60/92 (65%), Positives = 66/92 (71%)
Frame = +3 / +2
Query: 9 QFWXIGGVSSHLFAVFQGLLKXIAGVDTSFTVTSKGGDDEEFSELYTFKWXXXXXXXXXX 188
QFW IGGVS+HLFAVFQGLLK + GVDT+FTVTSK DD EF ELY FKW
Sbjct: 143 QFWVIGGVSAHLFAVFQGLLKVLGGVDTNFTVTSKSADDAEFGELYLFKWTTLLIPPTTL 322
Query: 189 XXXNFIGVVAGIXNAIXXGYESWGPLFGKLFF 284
N +GVVAG+ +AI GY SWGPLFGKLFF
Sbjct: 323 IILNMVGVVAGVSDAINNGYGSWGPLFGKLFF 418
>gb|CF233341.1|CF233341 PtaJXO0022B5B0503 Poplar cDNA library from young opposite xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 656
Score = 149 bits (321), Expect = 3e-036
Identities = 60/92 (65%), Positives = 66/92 (71%)
Frame = +3 / +1
Query: 9 QFWXIGGVSSHLFAVFQGLLKXIAGVDTSFTVTSKGGDDEEFSELYTFKWXXXXXXXXXX 188
QFW IGGVS+HLFAVFQGLLK + GVDT+FTVTSK DD EF ELY FKW
Sbjct: 142 QFWVIGGVSAHLFAVFQGLLKVLGGVDTNFTVTSKSADDAEFGELYLFKWTTLLIPPTTL 321
Query: 189 XXXNFIGVVAGIXNAIXXGYESWGPLFGKLFF 284
N +GVVAG+ +AI GY SWGPLFGKLFF
Sbjct: 322 IILNMVGVVAGVSDAINNGYGSWGPLFGKLFF 417
Score = 102 bits (218), Expect = 1e-021
Identities = 47/93 (50%), Positives = 49/93 (52%)
Frame = -1 / -1
Query: 286 AKKSFPNRGPHDSYPXXIAXXMPATTPMKFXXXXXXXXXXXXVHLNVXXXXXXXXSPPLD 107
AK SFPN+GPHD YP IA PATTP F VHL S D
Sbjct: 419 AKNSFPNKGPHDPYPLFIASDTPATTPTIFKMIRVVGGMRRVVHLKRYSSPNSASSADFD 240
Query: 106 VTVKLVSTPAXXLSSPWNTAKRCEDTPPXXQNC 8
VTVKLVSTP L PW TAKR +TPP QNC
Sbjct: 239 VTVKLVSTPPRTLRRPWKTAKR*AETPPITQNC 141
>gb|CF235304.1|CF235304 PtaJXT0021C1C0105 Poplar cDNA library from young tension xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 744
Score = 149 bits (321), Expect = 3e-036
Identities = 60/92 (65%), Positives = 66/92 (71%)
Frame = +3 / +3
Query: 9 QFWXIGGVSSHLFAVFQGLLKXIAGVDTSFTVTSKGGDDEEFSELYTFKWXXXXXXXXXX 188
QFW IGGVS+HLFAVFQGLLK + GVDT+FTVTSK DD EF ELY FKW
Sbjct: 75 QFWVIGGVSAHLFAVFQGLLKVLGGVDTNFTVTSKSADDAEFGELYLFKWTTLLIPPTTL 254
Query: 189 XXXNFIGVVAGIXNAIXXGYESWGPLFGKLFF 284
N +GVVAG+ +AI GY SWGPLFGKLFF
Sbjct: 255 IILNMVGVVAGVSDAINNGYGSWGPLFGKLFF 350
Score = 102 bits (218), Expect = 1e-021
Identities = 48/93 (51%), Positives = 50/93 (53%)
Frame = -1 / -3
Query: 286 AKKSFPNRGPHDSYPXXIAXXMPATTPMKFXXXXXXXXXXXXVHLNVXXXXXXXXSPPLD 107
AK SFPN+GPHD YP IA PATTP F VHL S D
Sbjct: 352 AKNSFPNKGPHDPYPLFIASDTPATTPTIFKMIRVVGGMRRVVHLKRXSSPNSASSADFD 173
Query: 106 VTVKLVSTPAXXLSSPWNTAKRCEDTPPXXQNC 8
VTVKLVSTP L PW TAKR +TPP QNC
Sbjct: 172 VTVKLVSTPPRTLRRPWKTAKR*AETPPITQNC 74
>gb|CN524029.1|CN524029 GQ015M07.T3_H06 GQ015 Populus trichocarpa x Populus deltoides cDNA
clone GQ015M07_H06 5', mRNA sequence
Length = 758
Score = 149 bits (321), Expect = 3e-036
Identities = 60/92 (65%), Positives = 66/92 (71%)
Frame = +3 / +1
Query: 9 QFWXIGGVSSHLFAVFQGLLKXIAGVDTSFTVTSKGGDDEEFSELYTFKWXXXXXXXXXX 188
QFW IGGVS+HLFAVFQGLLK + GVDT+FTVTSK DD EF ELY FKW
Sbjct: 184 QFWVIGGVSAHLFAVFQGLLKVLGGVDTNFTVTSKSADDAEFGELYLFKWTTLLIPPTTL 363
Query: 189 XXXNFIGVVAGIXNAIXXGYESWGPLFGKLFF 284
N +GVVAG+ +AI GY SWGPLFGKLFF
Sbjct: 364 IILNMVGVVAGVSDAINNGYGSWGPLFGKLFF 459
Score = 102 bits (218), Expect = 1e-021
Identities = 47/93 (50%), Positives = 49/93 (52%)
Frame = -1 / -1
Query: 286 AKKSFPNRGPHDSYPXXIAXXMPATTPMKFXXXXXXXXXXXXVHLNVXXXXXXXXSPPLD 107
AK SFPN+GPHD YP IA PATTP F VHL S D
Sbjct: 461 AKNSFPNKGPHDPYPLFIASDTPATTPTIFKMIRVVGGMRRVVHLKRYSSPNSASSADFD 282
Query: 106 VTVKLVSTPAXXLSSPWNTAKRCEDTPPXXQNC 8
VTVKLVSTP L PW TAKR +TPP QNC
Sbjct: 281 VTVKLVSTPPRTLRRPWKTAKR*AETPPITQNC 183
>gb|CN524680.1|CN524680 GQ015M13.T3_D10 GQ015 Populus trichocarpa x Populus deltoides cDNA
clone GQ015M13_D10 5', mRNA sequence
Length = 796
Score = 149 bits (321), Expect = 3e-036
Identities = 60/92 (65%), Positives = 66/92 (71%)
Frame = +3 / +3
Query: 9 QFWXIGGVSSHLFAVFQGLLKXIAGVDTSFTVTSKGGDDEEFSELYTFKWXXXXXXXXXX 188
QFW IGGVS+HLFAVFQGLLK + GVDT+FTVTSK DD EF ELY FKW
Sbjct: 324 QFWVIGGVSAHLFAVFQGLLKVLGGVDTNFTVTSKSADDAEFGELYLFKWTTLLIPPTTL 503
Query: 189 XXXNFIGVVAGIXNAIXXGYESWGPLFGKLFF 284
N +GVVAG+ +AI GY SWGPLFGKLFF
Sbjct: 504 IILNMVGVVAGVSDAINNGYGSWGPLFGKLFF 599
Score = 102 bits (218), Expect = 1e-021
Identities = 47/93 (50%), Positives = 49/93 (52%)
Frame = -1 / -1
Query: 286 AKKSFPNRGPHDSYPXXIAXXMPATTPMKFXXXXXXXXXXXXVHLNVXXXXXXXXSPPLD 107
AK SFPN+GPHD YP IA PATTP F VHL S D
Sbjct: 601 AKNSFPNKGPHDPYPLFIASDTPATTPTIFKMIRVVGGMRRVVHLKRYSSPNSASSADFD 422
Query: 106 VTVKLVSTPAXXLSSPWNTAKRCEDTPPXXQNC 8
VTVKLVSTP L PW TAKR +TPP QNC
Sbjct: 421 VTVKLVSTPPRTLRRPWKTAKR*AETPPITQNC 323
>gb|CV225435.1|CV225435 WS0161.B21_G07 PT-DX-A-7 Populus trichocarpa cDNA clone WS0161_G07
3', mRNA sequence
Length = 764
Score = 149 bits (321), Expect = 3e-036
Identities = 60/92 (65%), Positives = 66/92 (71%)
Frame = +3 / -3
Query: 9 QFWXIGGVSSHLFAVFQGLLKXIAGVDTSFTVTSKGGDDEEFSELYTFKWXXXXXXXXXX 188
QFW IGGVS+HLFAVFQGLLK + GVDT+FTVTSK DD EF ELY FKW
Sbjct: 693 QFWVIGGVSAHLFAVFQGLLKVLGGVDTNFTVTSKSADDAEFGELYLFKWTTLLIPPTTL 514
Query: 189 XXXNFIGVVAGIXNAIXXGYESWGPLFGKLFF 284
N +GVVAG+ +AI GY SWGPLFGKLFF
Sbjct: 513 IILNMVGVVAGVSDAINNGYGSWGPLFGKLFF 418
Score = 102 bits (218), Expect = 1e-021
Identities = 47/93 (50%), Positives = 49/93 (52%)
Frame = -1 / +2
Query: 286 AKKSFPNRGPHDSYPXXIAXXMPATTPMKFXXXXXXXXXXXXVHLNVXXXXXXXXSPPLD 107
AK SFPN+GPHD YP IA PATTP F VHL S D
Sbjct: 416 AKNSFPNKGPHDPYPLFIASDTPATTPTIFKMIRVVGGMRRVVHLKRYSSPNSASSADFD 595
Query: 106 VTVKLVSTPAXXLSSPWNTAKRCEDTPPXXQNC 8
VTVKLVSTP L PW TAKR +TPP QNC
Sbjct: 596 VTVKLVSTPPRTLRRPWKTAKR*AETPPITQNC 694
>gb|CV226017.1|CV226017 WS0163.B21_A20 PT-DX-A-7 Populus trichocarpa cDNA clone WS0163_A20
3', mRNA sequence
Length = 807
Score = 149 bits (321), Expect = 3e-036
Identities = 60/92 (65%), Positives = 66/92 (71%)
Frame = +3 / -2
Query: 9 QFWXIGGVSSHLFAVFQGLLKXIAGVDTSFTVTSKGGDDEEFSELYTFKWXXXXXXXXXX 188
QFW IGGVS+HLFAVFQGLLK + GVDT+FTVTSK DD EF ELY FKW
Sbjct: 695 QFWVIGGVSAHLFAVFQGLLKVLGGVDTNFTVTSKSADDAEFGELYLFKWTTLLIPPTTL 516
Query: 189 XXXNFIGVVAGIXNAIXXGYESWGPLFGKLFF 284
N +GVVAG+ +AI GY SWGPLFGKLFF
Sbjct: 515 IILNMVGVVAGVSDAINNGYGSWGPLFGKLFF 420
Score = 102 bits (218), Expect = 1e-021
Identities = 47/93 (50%), Positives = 49/93 (52%)
Frame = -1 / +1
Query: 286 AKKSFPNRGPHDSYPXXIAXXMPATTPMKFXXXXXXXXXXXXVHLNVXXXXXXXXSPPLD 107
AK SFPN+GPHD YP IA PATTP F VHL S D
Sbjct: 418 AKNSFPNKGPHDPYPLFIASDTPATTPTIFKMIRVVGGMRRVVHLKRYSSPNSASSADFD 597
Query: 106 VTVKLVSTPAXXLSSPWNTAKRCEDTPPXXQNC 8
VTVKLVSTP L PW TAKR +TPP QNC
Sbjct: 598 VTVKLVSTPPRTLRRPWKTAKR*AETPPITQNC 696
>gb|CV226195.1|CV226195 WS0163.B21_J02 PT-DX-A-7 Populus trichocarpa cDNA clone WS0163_J02
3', mRNA sequence
Length = 806
Score = 149 bits (321), Expect = 3e-036
Identities = 60/92 (65%), Positives = 66/92 (71%)
Frame = +3 / -3
Query: 9 QFWXIGGVSSHLFAVFQGLLKXIAGVDTSFTVTSKGGDDEEFSELYTFKWXXXXXXXXXX 188
QFW IGGVS+HLFAVFQGLLK + GVDT+FTVTSK DD EF ELY FKW
Sbjct: 693 QFWVIGGVSAHLFAVFQGLLKVLGGVDTNFTVTSKSADDAEFGELYLFKWTTLLIPPTTL 514
Query: 189 XXXNFIGVVAGIXNAIXXGYESWGPLFGKLFF 284
N +GVVAG+ +AI GY SWGPLFGKLFF
Sbjct: 513 IILNMVGVVAGVSDAINNGYGSWGPLFGKLFF 418
Score = 102 bits (218), Expect = 1e-021
Identities = 47/93 (50%), Positives = 49/93 (52%)
Frame = -1 / +2
Query: 286 AKKSFPNRGPHDSYPXXIAXXMPATTPMKFXXXXXXXXXXXXVHLNVXXXXXXXXSPPLD 107
AK SFPN+GPHD YP IA PATTP F VHL S D
Sbjct: 416 AKNSFPNKGPHDPYPLFIASDTPATTPTIFKMIRVVGGMRRVVHLKRYSSPNSASSADFD 595
Query: 106 VTVKLVSTPAXXLSSPWNTAKRCEDTPPXXQNC 8
VTVKLVSTP L PW TAKR +TPP QNC
Sbjct: 596 VTVKLVSTPPRTLRRPWKTAKR*AETPPITQNC 694
>gb|CV268970.1|CV268970 WS0206.B21_P09 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS0206_P09 3', mRNA sequence
Length = 756
Score = 149 bits (321), Expect = 3e-036
Identities = 60/92 (65%), Positives = 66/92 (71%)
Frame = +3 / +1
Query: 9 QFWXIGGVSSHLFAVFQGLLKXIAGVDTSFTVTSKGGDDEEFSELYTFKWXXXXXXXXXX 188
QFW IGGVS+HLFAVFQGLLK + GVDT+FTVTSK DD EF ELY FKW
Sbjct: 376 QFWVIGGVSAHLFAVFQGLLKVLGGVDTNFTVTSKSADDAEFGELYLFKWTTLLIPPTTL 555
Query: 189 XXXNFIGVVAGIXNAIXXGYESWGPLFGKLFF 284
N +GVVAG+ +AI GY SWGPLFGKLFF
Sbjct: 556 IILNMVGVVAGVSDAINNGYGSWGPLFGKLFF 651
Score = 102 bits (218), Expect = 1e-021
Identities = 47/93 (50%), Positives = 49/93 (52%)
Frame = -1 / -2
Query: 286 AKKSFPNRGPHDSYPXXIAXXMPATTPMKFXXXXXXXXXXXXVHLNVXXXXXXXXSPPLD 107
AK SFPN+GPHD YP IA PATTP F VHL S D
Sbjct: 653 AKNSFPNKGPHDPYPLFIASDTPATTPTIFKMIRVVGGMRRVVHLKRYSSPNSASSADFD 474
Query: 106 VTVKLVSTPAXXLSSPWNTAKRCEDTPPXXQNC 8
VTVKLVSTP L PW TAKR +TPP QNC
Sbjct: 473 VTVKLVSTPPRTLRRPWKTAKR*AETPPITQNC 375
>gb|CF232388.1|CF232388 PtaJXO0009H2H0216 Poplar cDNA library from young opposite xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 629
Score = 149 bits (320), Expect = 4e-036
Identities = 58/92 (63%), Positives = 68/92 (73%)
Frame = +3 / +3
Query: 9 QFWXIGGVSSHLFAVFQGLLKXIAGVDTSFTVTSKGGDDEEFSELYTFKWXXXXXXXXXX 188
QFW IGGVS+HLFAV QGLLK +AG+DT+FTVTSK DD++F ELY FKW
Sbjct: 189 QFWVIGGVSAHLFAVVQGLLKVLAGIDTNFTVTSKATDDDDFGELYAFKWTTLLIPPTTI 368
Query: 189 XXXNFIGVVAGIXNAIXXGYESWGPLFGKLFF 284
N +GVVAG+ +AI GY+SWGPLFGKLFF
Sbjct: 369 LIINLVGVVAGVSDAINNGYQSWGPLFGKLFF 464
Score = 102 bits (218), Expect = 1e-021
Identities = 46/93 (49%), Positives = 49/93 (52%)
Frame = -1 / -2
Query: 286 AKKSFPNRGPHDSYPXXIAXXMPATTPMKFXXXXXXXXXXXXVHLNVXXXXXXXXSPPLD 107
AKKSFPNRGPHD YP +A PATTP + VHL S L+
Sbjct: 466 AKKSFPNRGPHDWYPLFMASETPATTPTRLMIKIVVGGISRVVHLKAYSSPKSSSSVALE 287
Query: 106 VTVKLVSTPAXXLSSPWNTAKRCEDTPPXXQNC 8
VTVK VS PA PW TAKR DTPP QNC
Sbjct: 286 VTVKFVSIPAKTFRRPWTTAKR*ADTPPITQNC 188
>gb|CK087778.1|CK087778 A020P56.3pR Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA clone A020P56 3', mRNA sequence
Length = 826
Score = 149 bits (320), Expect = 4e-036
Identities = 61/92 (66%), Positives = 67/92 (72%)
Frame = +3 / -2
Query: 9 QFWXIGGVSSHLFAVFQGLLKXIAGVDTSFTVTSKGGDDEEFSELYTFKWXXXXXXXXXX 188
QFW IGG SSHLFA+FQGLLK +AGV+T+FTVTSK DD EFSELY FKW
Sbjct: 735 QFWVIGGASSHLFALFQGLLKVLAGVNTNFTVTSKAADDGEFSELYLFKWTSLLIPPMTL 556
Query: 189 XXXNFIGVVAGIXNAIXXGYESWGPLFGKLFF 284
N IGVV GI +AI GYE+WGPLFGKLFF
Sbjct: 555 LIINIIGVVVGISDAINNGYETWGPLFGKLFF 460
>gb|CN550567.1|CN550567 GQ0241.B3_I15 GQ024 Populus trichocarpa x Populus deltoides cDNA
clone GQ0241_I15 5', mRNA sequence
Length = 777
Score = 149 bits (320), Expect = 4e-036
Identities = 58/92 (63%), Positives = 68/92 (73%)
Frame = +3 / +1
Query: 9 QFWXIGGVSSHLFAVFQGLLKXIAGVDTSFTVTSKGGDDEEFSELYTFKWXXXXXXXXXX 188
QFW IGGVS+HLFAV QGLLK +AG+DT+FTVTSK DD++F ELY FKW
Sbjct: 175 QFWVIGGVSAHLFAVVQGLLKVLAGIDTNFTVTSKATDDDDFGELYAFKWTTLLIPPTTI 354
Query: 189 XXXNFIGVVAGIXNAIXXGYESWGPLFGKLFF 284
N +GVVAG+ +AI GY+SWGPLFGKLFF
Sbjct: 355 LIINLVGVVAGVSDAINNGYQSWGPLFGKLFF 450
Score = 106 bits (227), Expect = 6e-023
Identities = 48/93 (51%), Positives = 50/93 (53%)
Frame = -1 / -2
Query: 286 AKKSFPNRGPHDSYPXXIAXXMPATTPMKFXXXXXXXXXXXXVHLNVXXXXXXXXSPPLD 107
AKKSFPNRGPHD YP +A PATTP + VHLN S LD
Sbjct: 452 AKKSFPNRGPHD*YPLFMASETPATTPTRLMIKIVVGGISRVVHLNAYSSPKSSSSVALD 273
Query: 106 VTVKLVSTPAXXLSSPWNTAKRCEDTPPXXQNC 8
VTVK VS PA PW TAKR DTPP QNC
Sbjct: 272 VTVKFVSIPAKTFRRPWTTAKR*ADTPPITQNC 174
>gb|DT487943.1|DT487943 WS02535.B21_B11 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02535_B11 3', mRNA sequence
Length = 720
Score = 149 bits (320), Expect = 4e-036
Identities = 58/92 (63%), Positives = 68/92 (73%)
Frame = +3 / +1
Query: 9 QFWXIGGVSSHLFAVFQGLLKXIAGVDTSFTVTSKGGDDEEFSELYTFKWXXXXXXXXXX 188
QFW IGGVS+HLFAV QGLLK +AG+DT+FTVTSK DD++F ELY FKW
Sbjct: 334 QFWVIGGVSAHLFAVVQGLLKVLAGIDTNFTVTSKATDDDDFGELYAFKWTTLLIPPTTI 513
Query: 189 XXXNFIGVVAGIXNAIXXGYESWGPLFGKLFF 284
N +GVVAG+ +AI GY+SWGPLFGKLFF
Sbjct: 514 LIINLVGVVAGVSDAINNGYQSWGPLFGKLFF 609
Score = 106 bits (227), Expect = 6e-023
Identities = 48/93 (51%), Positives = 50/93 (53%)
Frame = -1 / -2
Query: 286 AKKSFPNRGPHDSYPXXIAXXMPATTPMKFXXXXXXXXXXXXVHLNVXXXXXXXXSPPLD 107
AKKSFPNRGPHD YP +A PATTP + VHLN S LD
Sbjct: 611 AKKSFPNRGPHD*YPLFMASETPATTPTRLMIKIVVGGISRVVHLNAYSSPKSSSSVALD 432
Query: 106 VTVKLVSTPAXXLSSPWNTAKRCEDTPPXXQNC 8
VTVK VS PA PW TAKR DTPP QNC
Sbjct: 431 VTVKFVSIPAKTFRRPWTTAKR*ADTPPITQNC 333
>gb|AY573572.1| Populus tremula x Populus tremuloides cellulose synthase (CesA2)
mRNA, complete cds
Length = 3991
Score = 149 bits (320), Expect = 4e-036
Identities = 61/92 (66%), Positives = 67/92 (72%)
Frame = +3 / +2
Query: 9 QFWXIGGVSSHLFAVFQGLLKXIAGVDTSFTVTSKGGDDEEFSELYTFKWXXXXXXXXXX 188
QFW IGG SSHLFA+FQGLLK +AGV+T+FTVTSK DD EFSELY FKW
Sbjct: 3272 QFWVIGGASSHLFALFQGLLKVLAGVNTNFTVTSKAADDGEFSELYLFKWTSLLIPPMTL 3451
Query: 189 XXXNFIGVVAGIXNAIXXGYESWGPLFGKLFF 284
N IGVV GI +AI GYE+WGPLFGKLFF
Sbjct: 3452 LIINIIGVVVGISDAINNGYETWGPLFGKLFF 3547
>gb|BP931353.1|BP931353 BP931353 full-length enriched poplar cDNA library Populus nigra
cDNA clone PnFL1-022_F10.r 3', mRNA sequence
Length = 677
Score = 146 bits (314), Expect = 3e-035
Identities = 58/90 (64%), Positives = 66/90 (73%)
Frame = +3 / -2
Query: 15 WXIGGVSSHLFAVFQGLLKXIAGVDTSFTVTSKGGDDEEFSELYTFKWXXXXXXXXXXXX 194
W IGGVSSHLFA+FQGLLK +AGV T+FTVTSKG DD EFSELY FKW
Sbjct: 676 WVIGGVSSHLFALFQGLLKVLAGVSTNFTVTSKGADDGEFSELYIFKWTSLLIPPTTLLI 497
Query: 195 XNFIGVVAGIXNAIXXGYESWGPLFGKLFF 284
N +GVV G+ +AI GY+SWGPLFG+LFF
Sbjct: 496 MNIVGVVVGVSDAINNGYDSWGPLFGRLFF 407
Score = 100 bits (212), Expect = 7e-021
Identities = 43/91 (47%), Positives = 48/91 (52%)
Frame = -1 / +3
Query: 286 AKKSFPNRGPHDSYPXXIAXXMPATTPMKFXXXXXXXXXXXXVHLNVXXXXXXXXSPPLD 107
AK S PN GPH+SYP +A P TTP F VHLN+ S P D
Sbjct: 405 AKNSLPNNGPHESYPLLMASETPTTTPTMFMINNVVGGINSDVHLNM*SSENSPSSAPFD 584
Query: 106 VTVKLVSTPAXXLSSPWNTAKRCEDTPPXXQ 14
VTVK V TPA LS PW A RC++TPP Q
Sbjct: 585 VTVKFVLTPAKTLSKPWKRANRCDETPPITQ 677
>gb|AY095297.1| Populus tremuloides cellulose synthase (CesA2) mRNA, complete cds
Length = 3277
Score = 146 bits (314), Expect = 3e-035
Identities = 57/92 (61%), Positives = 67/92 (72%)
Frame = +3 / +3
Query: 9 QFWXIGGVSSHLFAVFQGLLKXIAGVDTSFTVTSKGGDDEEFSELYTFKWXXXXXXXXXX 188
QFW IGGVS+HLFAV QGLLK +AG+D +FTVTSK DD++F ELY FKW
Sbjct: 2652 QFWVIGGVSAHLFAVVQGLLKVLAGIDLNFTVTSKATDDDDFGELYAFKWTTLLIPPTTI 2831
Query: 189 XXXNFIGVVAGIXNAIXXGYESWGPLFGKLFF 284
N +GVVAG+ +AI GY+SWGPLFGKLFF
Sbjct: 2832 LIINLVGVVAGVSDAINNGYQSWGPLFGKLFF 2927
Score = 100 bits (212), Expect = 7e-021
Identities = 46/93 (49%), Positives = 48/93 (51%)
Frame = -1 / -1
Query: 286 AKKSFPNRGPHDSYPXXIAXXMPATTPMKFXXXXXXXXXXXXVHLNVXXXXXXXXSPPLD 107
AKKSFPNRGPHD YP +A PATTP + VHL S LD
Sbjct: 2929 AKKSFPNRGPHDWYPLFMASETPATTPTRLMIKIVVGGISRVVHLKA*SSPKSSSSVALD 2750
Query: 106 VTVKLVSTPAXXLSSPWNTAKRCEDTPPXXQNC 8
VTVK S PA PW TAKR DTPP QNC
Sbjct: 2749 VTVKFRSIPAKTFRRPWTTAKR*ADTPPITQNC 2651
>gb|BU896705.1|BU896705 X044E08 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 718
Score = 143 bits (306), Expect = 4e-034
Identities = 57/90 (63%), Positives = 64/90 (71%)
Frame = +3 / +2
Query: 9 QFWXIGGVSSHLFAVFQGLLKXIAGVDTSFTVTSKGGDDEEFSELYTFKWXXXXXXXXXX 188
QFW IGGVS+HLFAVFQGLLK + GVDT+FTVTSK DD EF ELY FKW
Sbjct: 449 QFWVIGGVSAHLFAVFQGLLKVLGGVDTNFTVTSKSADDAEFGELYLFKWTTLLIPPTTL 628
Query: 189 XXXNFIGVVAGIXNAIXXGYESWGPLFGKL 278
N +GVVAG+ +AI GY SWGPLFG+L
Sbjct: 629 IILNMVGVVAGVSDAINNGYGSWGPLFGRL 718
>gb|CN549469.1|CN549469 GQ0241.B3_B20 GQ024 Populus trichocarpa x Populus deltoides cDNA
clone GQ0241_B20 5', mRNA sequence
Length = 839
Score = 143 bits (306), Expect = 4e-034
Identities = 55/92 (59%), Positives = 65/92 (70%)
Frame = +3 / +1
Query: 9 QFWXIGGVSSHLFAVFQGLLKXIAGVDTSFTVTSKGGDDEEFSELYTFKWXXXXXXXXXX 188
QFW IGGVS+HLFAVFQG LK +AG+DT+FTVT+K DD EF ELY KW
Sbjct: 82 QFWVIGGVSAHLFAVFQGFLKLLAGIDTNFTVTAKSADDTEFGELYMVKWTTLLIPPTTL 261
Query: 189 XXXNFIGVVAGIXNAIXXGYESWGPLFGKLFF 284
N +GVVAG +A+ GYE+WGPLFGK+FF
Sbjct: 262 LIINIVGVVAGFSDALNKGYEAWGPLFGKVFF 357
>gb|AY573573.2| Populus tremula x Populus tremuloides cellulose synthase (CesA3-1)
mRNA, complete cds
Length = 3250
Score = 143 bits (306), Expect = 4e-034
Identities = 55/92 (59%), Positives = 65/92 (70%)
Frame = +3 / +2
Query: 9 QFWXIGGVSSHLFAVFQGLLKXIAGVDTSFTVTSKGGDDEEFSELYTFKWXXXXXXXXXX 188
QFW IGGVS+HLFAVFQG LK +AG+DT+FTVT+K DD EF ELY KW
Sbjct: 2510 QFWVIGGVSAHLFAVFQGFLKMLAGIDTNFTVTAKAADDTEFGELYMVKWTTLLIPPTTL 2689
Query: 189 XXXNFIGVVAGIXNAIXXGYESWGPLFGKLFF 284
N +GVVAG +A+ GYE+WGPLFGK+FF
Sbjct: 2690 LIINIVGVVAGFSDALNKGYEAWGPLFGKVFF 2785
>gb|AF081534.1|AF081534 Populus x canescens cellulose synthase (cel1) mRNA, complete cds
Length = 3395
Score = 142 bits (304), Expect = 7e-034
Identities = 57/92 (61%), Positives = 61/92 (66%)
Frame = +3 / +3
Query: 9 QFWXIGGVSSHLFAVFQGLLKXIAGVDTSFTVTSKGGDDEEFSELYTFKWXXXXXXXXXX 188
QFW IGGVS HLFAVFQG K + GVDT+FTVTSK DD EF ELY FKW
Sbjct: 2688 QFWVIGGVSGHLFAVFQGFFKVLGGVDTNFTVTSKSADDAEFGELYLFKWTTLLIPPTTL 2867
Query: 189 XXXNFIGVVAGIXNAIXXGYESWGPLFGKLFF 284
N +GVVAG+ I GY SWGPLFGKLFF
Sbjct: 2868 IILNMVGVVAGVSARINNGYGSWGPLFGKLFF 2963
Score = 103 bits (219), Expect = 8e-022
Identities = 47/93 (50%), Positives = 48/93 (51%)
Frame = -1 / -2
Query: 286 AKKSFPNRGPHDSYPXXIAXXMPATTPMKFXXXXXXXXXXXXVHLNVXXXXXXXXSPPLD 107
AK SFPN+GPHD YP I PATTP F VHL S D
Sbjct: 2965 AKNSFPNKGPHDPYPLFIRADTPATTPTIFKMIRVVGGMRRVVHLKRYSSPNSASSADFD 2786
Query: 106 VTVKLVSTPAXXLSSPWNTAKRCEDTPPXXQNC 8
VTVKLVSTP L PW TAKR DTPP QNC
Sbjct: 2785 VTVKLVSTPPRTLKKPWKTAKR*PDTPPITQNC 2687
>gb|CF229187.1|CF229187 PtaXM0022D10D1008 Poplar cDNA library from mature xylem Populus
alba x Populus tremula cDNA 5', mRNA sequence
Length = 727
Score = 141 bits (302), Expect = 1e-033
Identities = 54/92 (58%), Positives = 65/92 (70%)
Frame = +3 / +2
Query: 9 QFWXIGGVSSHLFAVFQGLLKXIAGVDTSFTVTSKGGDDEEFSELYTFKWXXXXXXXXXX 188
QFW IGGVS+HLFAVFQG LK +AG+DT+FTVT+K +D EF ELY KW
Sbjct: 206 QFWVIGGVSAHLFAVFQGFLKMLAGIDTNFTVTAKAAEDTEFGELYMVKWTTLLIPPTTL 385
Query: 189 XXXNFIGVVAGIXNAIXXGYESWGPLFGKLFF 284
N +GVVAG +A+ GYE+WGPLFGK+FF
Sbjct: 386 LIINIVGVVAGFSDALNKGYEAWGPLFGKVFF 481
>gb|CF232848.1|CF232848 PtaJXO0016E6E0610 Poplar cDNA library from young opposite xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 764
Score = 141 bits (302), Expect = 1e-033
Identities = 54/92 (58%), Positives = 65/92 (70%)
Frame = +3 / +1
Query: 9 QFWXIGGVSSHLFAVFQGLLKXIAGVDTSFTVTSKGGDDEEFSELYTFKWXXXXXXXXXX 188
QFW IGGVS+HLFAVFQG LK +AG+DT+FTVT+K +D EF ELY KW
Sbjct: 163 QFWVIGGVSAHLFAVFQGFLKMLAGIDTNFTVTAKAAEDAEFGELYMVKWTTLLIPPTTL 342
Query: 189 XXXNFIGVVAGIXNAIXXGYESWGPLFGKLFF 284
N +GVVAG +A+ GYE+WGPLFGK+FF
Sbjct: 343 LIINIVGVVAGFSDALNKGYEAWGPLFGKVFF 438
>gb|CF235000.1|CF235000 PtaJXT0017F7F0711 Poplar cDNA library from young tension xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 770
Score = 141 bits (302), Expect = 1e-033
Identities = 54/92 (58%), Positives = 65/92 (70%)
Frame = +3 / +1
Query: 9 QFWXIGGVSSHLFAVFQGLLKXIAGVDTSFTVTSKGGDDEEFSELYTFKWXXXXXXXXXX 188
QFW IGGVS+HLFAVFQG LK +AG+DT+FTVT+K +D EF ELY KW
Sbjct: 187 QFWVIGGVSAHLFAVFQGFLKMLAGIDTNFTVTAKAAEDTEFGELYMVKWTTLLIPPTTL 366
Query: 189 XXXNFIGVVAGIXNAIXXGYESWGPLFGKLFF 284
N +GVVAG +A+ GYE+WGPLFGK+FF
Sbjct: 367 LIINIVGVVAGFSDALNKGYEAWGPLFGKVFF 462
>gb|AY573574.1| Populus tremula x Populus tremuloides cellulose synthase (CesA3-2)
mRNA, complete cds
Length = 3358
Score = 141 bits (302), Expect = 1e-033
Identities = 54/92 (58%), Positives = 65/92 (70%)
Frame = +3 / +1
Query: 9 QFWXIGGVSSHLFAVFQGLLKXIAGVDTSFTVTSKGGDDEEFSELYTFKWXXXXXXXXXX 188
QFW IGGVS+HLFAVFQG LK +AG+DT+FTVT+K +D EF ELY KW
Sbjct: 2593 QFWVIGGVSAHLFAVFQGFLKMLAGIDTNFTVTAKAAEDAEFGELYMVKWTTLLIPPTTL 2772
Query: 189 XXXNFIGVVAGIXNAIXXGYESWGPLFGKLFF 284
N +GVVAG +A+ GYE+WGPLFGK+FF
Sbjct: 2773 LIINIVGVVAGFSDALNKGYEAWGPLFGKVFF 2868
>gb|CF234438.1|CF234438 Ptajxojxo2F10F1012 Poplar cDNA library from young opposite xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 772
Score = 80.8 bits (170), Expect(2) = 2e-033
Identities = 31/40 (77%), Positives = 36/40 (90%)
Frame = +3 / +2
Query: 9 QFWXIGGVSSHLFAVFQGLLKXIAGVDTSFTVTSKGGDDE 128
QFW IGGVS+HLFAVFQGLLK +AG+DTSFTVTSK D++
Sbjct: 125 QFWVIGGVSAHLFAVFQGLLKVLAGIDTSFTVTSKSSDED 244
Score = 79.0 bits (166), Expect(2) = 2e-033
Identities = 30/55 (54%), Positives = 36/55 (65%)
Frame = +3 / +2
Query: 120 DDEEFSELYTFKWXXXXXXXXXXXXXNFIGVVAGIXNAIXXGYESWGPLFGKLFF 284
+D +F+ELY FKW N +GVVAGI +AI GY+SWGPLFGKLFF
Sbjct: 239 EDGDFTELYMFKWTTLLIPPTTLLIVNLVGVVAGISHAINSGYQSWGPLFGKLFF 403
>gb|CK318639.1|CK318639 X9P01f01 Populus stem seasonal library Populus deltoides cDNA, mRNA
sequence
Length = 673
Score = 140 bits (300), Expect = 3e-033
Identities = 57/88 (64%), Positives = 63/88 (71%)
Frame = +3 / +3
Query: 21 IGGVSSHLFAVFQGLLKXIAGVDTSFTVTSKGGDDEEFSELYTFKWXXXXXXXXXXXXXN 200
IGGVS+HLFAVFQGLLK + GVDT+FTVTSK DD EF ELY FKW N
Sbjct: 9 IGGVSAHLFAVFQGLLKVLGGVDTNFTVTSKSADDAEFGELYLFKWTTLLIPPTTLIILN 188
Query: 201 FIGVVAGIXNAIXXGYESWGPLFGKLFF 284
+GVVAG+ +AI GY SWGPLFGKLFF
Sbjct: 189 MVGVVAGVSDAINNGYGSWGPLFGKLFF 272
>gb|AJ775532.1|AJ775532 AJ775532 Populus euphratica shoot 3-6 months Populus euphratica
cDNA clone P0000300033F04F1, mRNA sequence
Length = 589
Score = 140 bits (300), Expect = 3e-033
Identities = 55/88 (62%), Positives = 65/88 (73%)
Frame = +3 / +3
Query: 21 IGGVSSHLFAVFQGLLKXIAGVDTSFTVTSKGGDDEEFSELYTFKWXXXXXXXXXXXXXN 200
+GGVS+HLFAV QGLLK +AG+DT+FTVTSK DDE+F ELY FKW N
Sbjct: 30 LGGVSAHLFAVVQGLLKVLAGIDTNFTVTSKATDDEDFGELYAFKWTTLLIPPTTILIIN 209
Query: 201 FIGVVAGIXNAIXXGYESWGPLFGKLFF 284
+GVVAG+ +AI GY+SWGPLFGKLFF
Sbjct: 210 LVGVVAGVSDAINNGYQSWGPLFGKLFF 293
>gb|CV227633.1|CV227633 WS0167.B21_M03 PT-DX-A-7 Populus trichocarpa cDNA clone WS0167_M03
3', mRNA sequence
Length = 823
Score = 100 bits (213), Expect(2) = 7e-033
Identities = 39/50 (78%), Positives = 42/50 (84%)
Frame = +3 / -1
Query: 9 QFWXIGGVSSHLFAVFQGLLKXIAGVDTSFTVTSKGGDDEEFSELYTFKW 158
QFW IGGVS+HLFAVFQGLLK + GVDT+FTVTSK DD EF ELY FKW
Sbjct: 682 QFWVIGGVSAHLFAVFQGLLKVLGGVDTNFTVTSKSADDAEFGELYLFKW 533
Score = 57.4 bits (119), Expect(2) = 7e-033
Identities = 21/29 (72%), Positives = 24/29 (82%)
Frame = +3 / -2
Query: 198 NFIGVVAGIXNAIXXGYESWGPLFGKLFF 284
N +GVVAG+ +AI GY SWGPLFGKLFF
Sbjct: 492 NMVGVVAGVSDAINNGYGSWGPLFGKLFF 406
>gb|DT500468.1|DT500468 PX0015.BR_I21 PT-X-FL-A-1 Populus trichocarpa cDNA clone PX0015_I21
5', mRNA sequence
Length = 687
Score = 77.6 bits (163), Expect(2) = 5e-032
Identities = 29/40 (72%), Positives = 35/40 (87%)
Frame = +3 / +2
Query: 9 QFWXIGGVSSHLFAVFQGLLKXIAGVDTSFTVTSKGGDDE 128
QFW IGG S+HLFAVFQGLLK +AG+DT+FTVTSK D++
Sbjct: 56 QFWVIGGTSAHLFAVFQGLLKVLAGIDTNFTVTSKASDED 175
Score = 77.1 bits (162), Expect(2) = 5e-032
Identities = 28/55 (50%), Positives = 35/55 (63%)
Frame = +3 / +2
Query: 120 DDEEFSELYTFKWXXXXXXXXXXXXXNFIGVVAGIXNAIXXGYESWGPLFGKLFF 284
+D +F+ELY FKW N +G+VAG+ AI GY+SWGPLFGKLFF
Sbjct: 170 EDGDFAELYVFKWTSLLIPPTTVILLNMVGIVAGVSYAINSGYQSWGPLFGKLFF 334
>gb|DT493063.1|DT493063 WS02553.C21_E11 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02553_E11 3', mRNA sequence
Length = 774
Score = 77.6 bits (163), Expect(2) = 6e-032
Identities = 29/40 (72%), Positives = 35/40 (87%)
Frame = +3 / -2
Query: 9 QFWXIGGVSSHLFAVFQGLLKXIAGVDTSFTVTSKGGDDE 128
QFW IGG S+HLFAVFQGLLK +AG+DT+FTVTSK D++
Sbjct: 740 QFWVIGGTSAHLFAVFQGLLKVLAGIDTNFTVTSKASDED 621
Score = 77.1 bits (162), Expect(2) = 6e-032
Identities = 28/55 (50%), Positives = 35/55 (63%)
Frame = +3 / -2
Query: 120 DDEEFSELYTFKWXXXXXXXXXXXXXNFIGVVAGIXNAIXXGYESWGPLFGKLFF 284
+D +F+ELY FKW N +G+VAG+ AI GY+SWGPLFGKLFF
Sbjct: 626 EDGDFAELYVFKWTSLLIPPTTVILLNMVGIVAGVSYAINSGYQSWGPLFGKLFF 462
>gb|CF236377.1|CF236377 PtaJXT2B10B1004 Poplar cDNA library from young tension xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 651
Score = 135 bits (290), Expect = 6e-032
Identities = 57/91 (62%), Positives = 62/91 (68%)
Frame = +3 / +2
Query: 9 QFWXIGGVSSHLFAVFQGLLKXIAGVDTSFTVTSKGGDDEEFSELYTFKWXXXXXXXXXX 188
QFW IGGVS+HLFAVFQGLLK + GVDT+FTVTSK DD E ELY FKW
Sbjct: 365 QFWVIGGVSTHLFAVFQGLLKVLGGVDTNFTVTSKSXDDAEXGELYLFKWTTLLIPPTTL 544
Query: 189 XXXNFIGVVAGIXNAIXXGYESWGPLFGKLF 281
N GVVAG+ +A Y SWGPLFGKLF
Sbjct: 545 IIXNXXGVVAGVSDAXNNXYGSWGPLFGKLF 637
>gb|CF228734.1|CF228734 PtaXM0016G4G0414 Poplar cDNA library from mature xylem Populus alba
x Populus tremula cDNA 5', mRNA sequence
Length = 747
Score = 135 bits (289), Expect = 8e-032
Identities = 53/92 (57%), Positives = 64/92 (69%)
Frame = +3 / +3
Query: 9 QFWXIGGVSSHLFAVFQGLLKXIAGVDTSFTVTSKGGDDEEFSELYTFKWXXXXXXXXXX 188
QF IGGVS+HLFAVFQG LK +AG+DT+FTVT+K +D EF ELY KW
Sbjct: 204 QFXVIGGVSAHLFAVFQGFLKMLAGIDTNFTVTAKAAEDTEFGELYMVKWTTLLIPPTTL 383
Query: 189 XXXNFIGVVAGIXNAIXXGYESWGPLFGKLFF 284
N +GVVAG +A+ GYE+WGPLFGK+FF
Sbjct: 384 LIINIVGVVAGFSDALNKGYEAWGPLFGKVFF 479
>gb|AY162181.1| Populus tremuloides cellulose synthase (CesA4) mRNA, complete cds
Length = 3640
Score = 77.6 bits (163), Expect(2) = 1e-031
Identities = 29/40 (72%), Positives = 35/40 (87%)
Frame = +3 / +1
Query: 9 QFWXIGGVSSHLFAVFQGLLKXIAGVDTSFTVTSKGGDDE 128
QFW IGG S+HLFAVFQGLLK +AG+DT+FTVTSK D++
Sbjct: 2812 QFWVIGGTSAHLFAVFQGLLKVLAGIDTNFTVTSKASDED 2931
Score = 77.1 bits (162), Expect(2) = 1e-031
Identities = 28/55 (50%), Positives = 35/55 (63%)
Frame = +3 / +1
Query: 120 DDEEFSELYTFKWXXXXXXXXXXXXXNFIGVVAGIXNAIXXGYESWGPLFGKLFF 284
+D +F+ELY FKW N +G+VAG+ AI GY+SWGPLFGKLFF
Sbjct: 2926 EDGDFAELYVFKWTSLLIPPTTVIVLNMVGIVAGVSYAINSGYQSWGPLFGKLFF 3090
>gb|AY055724.2| Populus tremuloides cellulose synthase (CesA5) mRNA, complete cds
Length = 3532
Score = 79.4 bits (167), Expect(2) = 1e-031
Identities = 30/40 (75%), Positives = 36/40 (90%)
Frame = +3 / +2
Query: 9 QFWXIGGVSSHLFAVFQGLLKXIAGVDTSFTVTSKGGDDE 128
QFW IGGVS+HLFAVFQGLLK +AG+DT+FTVTSK D++
Sbjct: 3002 QFWVIGGVSAHLFAVFQGLLKVLAGIDTNFTVTSKASDED 3121
Score = 75.3 bits (158), Expect(2) = 1e-031
Identities = 29/55 (52%), Positives = 35/55 (63%)
Frame = +3 / +2
Query: 120 DDEEFSELYTFKWXXXXXXXXXXXXXNFIGVVAGIXNAIXXGYESWGPLFGKLFF 284
+D + +ELY FKW N +GVVAGI +AI GY+SWGPLFGKLFF
Sbjct: 3116 EDGDSAELYLFKWTTLLIPPTTLLIVNLVGVVAGISHAINSGYQSWGPLFGKLFF 3280
>gb|AJ778410.1|AJ778410 AJ778410 Populus euphratica cambium 3-6 months Populus euphratica
cDNA clone P0000500004B05F1, mRNA sequence
Length = 634
Score = 79.0 bits (166), Expect(2) = 1e-031
Identities = 31/42 (73%), Positives = 36/42 (85%)
Frame = +3 / +1
Query: 9 QFWXIGGVSSHLFAVFQGLLKXIAGVDTSFTVTSKGGDDEEF 134
QFW IGGVS+HLFAV QGLLK +AG+DT+FTVTSK DD+ F
Sbjct: 13 QFWVIGGVSAHLFAVVQGLLKVLAGIDTNFTVTSKATDDDVF 138
Score = 74.4 bits (156), Expect(2) = 1e-031
Identities = 28/51 (54%), Positives = 32/51 (62%)
Frame = +3 / +2
Query: 132 FSELYTFKWXXXXXXXXXXXXXNFIGVVAGIXNAIXXGYESWGPLFGKLFF 284
F ELY FKW N +GVVAG+ +AI GY+SWGPLFGKLFF
Sbjct: 137 FGELYAFKWTTLLIPPTTILIINLVGVVAGVSDAINNGYQSWGPLFGKLFF 289
>gb|CV272431.1|CV272431 WS0157.B21_K08 PTxN-IB-A-6 Populus trichocarpa x Populus nigra cDNA
clone WS0157_K08 3', mRNA sequence
Length = 689
Score = 95.5 bits (202), Expect(2) = 2e-031
Identities = 37/48 (77%), Positives = 40/48 (83%)
Frame = +3 / -1
Query: 15 WXIGGVSSHLFAVFQGLLKXIAGVDTSFTVTSKGGDDEEFSELYTFKW 158
W IGGVS+HLFAVFQGLLK + GVDT+FTVTSK DD EF ELY FKW
Sbjct: 689 WVIGGVSAHLFAVFQGLLKVLGGVDTNFTVTSKSADDAEFGELYLFKW 546
Score = 57.4 bits (119), Expect(2) = 2e-031
Identities = 21/29 (72%), Positives = 24/29 (82%)
Frame = +3 / -2
Query: 198 NFIGVVAGIXNAIXXGYESWGPLFGKLFF 284
N +GVVAG+ +AI GY SWGPLFGKLFF
Sbjct: 505 NMVGVVAGVSDAINNGYGSWGPLFGKLFF 419
>gb|CK088642.1|CK088642 A064P24.3pR Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA clone A064P24 3', mRNA sequence
Length = 673
Score = 131 bits (281), Expect = 1e-030
Identities = 53/85 (62%), Positives = 60/85 (70%)
Frame = +3 / -1
Query: 30 VSSHLFAVFQGLLKXIAGVDTSFTVTSKGGDDEEFSELYTFKWXXXXXXXXXXXXXNFIG 209
VS+HLFAVFQG+LK + GVDT+FTVTSK DD EF ELY FKW N +G
Sbjct: 673 VSAHLFAVFQGVLKVLGGVDTNFTVTSKSADDAEFGELYLFKWTTLLIPPTTLIILNMVG 494
Query: 210 VVAGIXNAIXXGYESWGPLFGKLFF 284
VVAG+ +AI GY SWGPLFGKLFF
Sbjct: 493 VVAGVSDAINNGYGSWGPLFGKLFF 419
>gb|CK092990.1|CK092990 G103P13.3pR Populus tension wood cDNA library Populus tremula x
Populus tremuloides cDNA clone G103P13 3', mRNA sequence
Length = 724
Score = 131 bits (280), Expect = 1e-030
Identities = 50/89 (56%), Positives = 61/89 (68%)
Frame = +3 / +1
Query: 9 QFWXIGGVSSHLFAVFQGLLKXIAGVDTSFTVTSKGGDDEEFSELYTFKWXXXXXXXXXX 188
QFW IGGVS+HLFAVFQG LK +AG+DT+FTVT+K +D EF ELY KW
Sbjct: 256 QFWVIGGVSAHLFAVFQGFLKMLAGIDTNFTVTAKAAEDAEFGELYMVKWTTLLIPPTTL 435
Query: 189 XXXNFIGVVAGIXNAIXXGYESWGPLFGK 275
N +GVVAG +A+ GYE+WGPLF +
Sbjct: 436 LIINIVGVVAGFSDALNKGYEAWGPLFAR 522
>gb|AJ777820.1|AJ777820 AJ777820 Populus euphratica root 3-6 months Populus euphratica cDNA
clone P0000400035F01F1, mRNA sequence
Length = 658
Score = 79.4 bits (167), Expect(3) = 2e-030
Identities = 30/40 (75%), Positives = 36/40 (90%)
Frame = +3 / +2
Query: 9 QFWXIGGVSSHLFAVFQGLLKXIAGVDTSFTVTSKGGDDE 128
QFW IGGVS+HLFAVFQGLLK +AG+DT+FTVTSK D++
Sbjct: 344 QFWVIGGVSAHLFAVFQGLLKVLAGIDTNFTVTSKASDED 463
Score = 60.2 bits (125), Expect(3) = 2e-030
Identities = 22/29 (75%), Positives = 25/29 (86%)
Frame = +3 / +3
Query: 198 NFIGVVAGIXNAIXXGYESWGPLFGKLFF 284
N +GVVAGI +AI GY+SWGPLFGKLFF
Sbjct: 537 NLVGVVAGISHAINSGYQSWGPLFGKLFF 623
Score = 26.7 bits (52), Expect(3) = 2e-030
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = +3 / +2
Query: 120 DDEEFSELYTFKW 158
+D +F+ELY FKW
Sbjct: 458 EDGDFAELYLFKW 496
>gb|DT475055.1|DT475055 WS0125.BR_N16 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS0125_N16 5', mRNA sequence
Length = 595
Score = 99.6 bits (211), Expect(2) = 3e-030
Identities = 40/67 (59%), Positives = 45/67 (67%)
Frame = +3 / +2
Query: 9 QFWXIGGVSSHLFAVFQGLLKXIAGVDTSFTVTSKGGDDEEFSELYTFKWXXXXXXXXXX 188
QFW IGG S+HLFA+FQGLLK +AGV T+FTVTSK DD EFSELY FKW
Sbjct: 275 QFWVIGGASAHLFALFQGLLKVLAGVSTNFTVTSKAADDGEFSELYLFKWTSLLIPPTTL 454
Query: 189 XXXNFIG 209
N +G
Sbjct: 455 LIMNIVG 475
Score = 49.2 bits (101), Expect(2) = 3e-030
Identities = 17/25 (68%), Positives = 21/25 (84%)
Frame = +3 / +3
Query: 210 VVAGIXNAIXXGYESWGPLFGKLFF 284
VV G+ +AI GY+SWGPLFG+LFF
Sbjct: 477 VVVGVSDAINNGYDSWGPLFGRLFF 551
Database: Populus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:49 PM
Number of letters in database: 203,408,664
Number of sequences in database: 369,679
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 123,377,528
Number of Sequences: 369679
Number of extensions: 1247715
Number of successful extensions: 107872
Number of sequences better than 1.0e-020: 107
length of database: 67,802,888
effective HSP length: 48
effective length of database: 50,058,296
effective search space used: 2302681616
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)