TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QCH22b04.yg.2.1
(457 letters)
Database: Populus_nucl_with_EST.fasta
369,679 sequences; 203,408,664 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|DV463218.1|DV463218 MTUNUL1.P13.B10 NUL Populus fremonti... 295 1e-079
gb|DV465821.1|DV465821 MTUNUL1.P43.F01 NUL Populus fremonti... 294 2e-079
gb|CF230847.1|CF230847 PtaC0014A4A0402 Poplar cDNA library ... 294 3e-079
gb|BI139484.1|BI139484 F132P54Y Populus flower cDNA library... 278 1e-074
gb|DT480100.1|DT480100 WS02527.BR_O22 PT-MB-N-A-15 Populus ... 271 2e-072
gb|CN519695.1|CN519695 GQ0104.B3_A16 GQ010 Populus trichoca... 223 4e-058
gb|DT474220.1|DT474220 WS01231.BR_D17 PT-GT-FL-A-3 Populus ... 174 2e-057
gb|CF230452.1|CF230452 Ptac0008E4E0410 Poplar cDNA library ... 215 2e-055
gb|DV463799.1|DV463799 MTUNUL1.P2.E10 NUL Populus fremontii... 193 6e-049
gb|BU891247.1|BU891247 P047G09 Populus petioles cDNA librar... 186 9e-047
gb|DN496222.1|DN496222 P047G09.5pR Populus petioles cDNA li... 186 9e-047
gb|BU831403.1|BU831403 T021A10 Populus apical shoot cDNA li... 173 5e-043
gb|BI070498.1|BI070498 C039P08U Populus strain T89 leaves P... 96 7e-043
gb|CN518806.1|CN518806 GQ0102.B3_C22 GQ010 Populus trichoca... 172 1e-042
gb|BI136266.1|BI136266 F065P78Y Populus flower cDNA library... 165 2e-040
gb|BI136871.1|BI136871 F075P74Y Populus flower cDNA library... 147 3e-035
gb|BU836496.1|BU836496 T087C12 Populus apical shoot cDNA li... 122 1e-027
gb|DN499789.1|DN499789 T087C12.5pR Populus shoot meristem c... 122 1e-027
gb|CV242880.1|CV242880 WS02516.B21.1_E18 PT-MB-N-A-15 Popul... 114 4e-025
gb|BP925803.1|BP925803 BP925803 full-length enriched poplar... 106 7e-023
>gb|DV463218.1|DV463218 MTUNUL1.P13.B10 NUL Populus fremontii x Populus angustifolia cDNA,
mRNA sequence
Length = 825
Score = 295 bits (638), Expect = 1e-079
Identities = 119/139 (85%), Positives = 132/139 (94%)
Frame = +1 / +3
Query: 1 TRSYFAMKVMDKTSLASRKKLLRAQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCP 180
TR +FAMKVMDK SLASRKKL RAQTEREILQ LDHPFLPTLYTHFETD+FSCLVME+CP
Sbjct: 195 TRCFFAMKVMDKASLASRKKLTRAQTEREILQLLDHPFLPTLYTHFETDRFSCLVMEYCP 374
Query: 181 GGDLHTLRQRQPGKYFSEQAAKFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIML 360
GGDLHTLRQRQPGK+FSE AA+FY AEVLLALEYLHMLG++YRDLKPENVLVR+DGHIML
Sbjct: 375 GGDLHTLRQRQPGKHFSEHAARFYAAEVLLALEYLHMLGVVYRDLKPENVLVRDDGHIML 554
Query: 361 SDFDLSLRCSVSLTVIKSA 417
SDFDLSLRC+VS T+I+++
Sbjct: 555 SDFDLSLRCAVSPTLIRTS 611
Score = 179 bits (386), Expect = 8e-045
Identities = 83/133 (62%), Positives = 95/133 (71%)
Frame = -3 / -3
Query: 410 LITVRLTEQRRDRSKSDSMMWPSSRTRTFSGLRSRYIIPSICRYSNARSTSAT*NFAACS 231
LI V T R+RSKS+S+MWPSSRTRTFSG +S PS+ RYS+A TSA *N AACS
Sbjct: 604 LIRVGETAHLRERSKSESIMWPSSRTRTFSGFKSL*TTPSM*RYSSANKTSAA*NLAACS 425
Query: 230 EKYFPGCLWRRV*RSPPGQNSITKHENLSVSK*VYRVGRNGWSRDCXXXXXXXXXXXXXR 51
EK FPGC +V*RSPPGQ SITKHENLSVSK*VY+VGRNG S +C
Sbjct: 424 EKCFPGCRCLKV*RSPPGQYSITKHENLSVSK*VYKVGRNG*SNNCKISLSVCALVNFFL 245
Query: 50 LAKEVLSITFMAK 12
LA++ LSITF+AK
Sbjct: 244 LARDALSITFIAK 206
Score = 119 bits (254), Expect = 1e-026
Identities = 56/128 (43%), Positives = 83/128 (64%)
Frame = -2 / -2
Query: 387 TAKR*IEVRQHDVAIFPNEDILWFKITVYNPKHMQVFQCKEHLSYIELCCLL*KIFSRLP 208
T+K +++ +H VA+ + DI F+++V +H+++F+C+ +L I+ +L K+FSRL
Sbjct: 581 TSKGKVKI*KHYVAVITD*DIFRFQVSVDYSEHVKIFKCQ*NLCRIKSGSMLGKMFSRLS 402
Query: 207 LAKSVKIPSRAEFHNQA*KLVCLKVSIQGW*KWMVQGLQDLPLGLSSKQLLPTCQRSLIH 28
L +SVKI FHNQ *+ VCLK+SI KWM+Q LQ+LP L S QL P C+ L+H
Sbjct: 401 LPQSVKITPWTIFHNQT*ESVCLKMSI*SRQKWMIQQLQNLPFCLRSCQLFPACKGCLVH 222
Query: 27 NLHGKVTP 4
H K TP
Sbjct: 221 YFHCKKTP 198
>gb|DV465821.1|DV465821 MTUNUL1.P43.F01 NUL Populus fremontii x Populus angustifolia cDNA,
mRNA sequence
Length = 837
Score = 294 bits (637), Expect = 2e-079
Identities = 119/139 (85%), Positives = 132/139 (94%)
Frame = +1 / +3
Query: 1 TRSYFAMKVMDKTSLASRKKLLRAQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCP 180
TR +FAMKVMDK SLASRKKL RAQTEREILQ LDHPFLPTLYTHFETD+FSCLVME+CP
Sbjct: 159 TRCFFAMKVMDKASLASRKKLTRAQTEREILQLLDHPFLPTLYTHFETDRFSCLVMEYCP 338
Query: 181 GGDLHTLRQRQPGKYFSEQAAKFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIML 360
GGDLHTLRQRQPGK+FSE AA+FY AEVLLALEYLHMLG++YRDLKPENVLVR+DGHIML
Sbjct: 339 GGDLHTLRQRQPGKHFSEYAARFYAAEVLLALEYLHMLGVVYRDLKPENVLVRDDGHIML 518
Query: 361 SDFDLSLRCSVSLTVIKSA 417
SDFDLSLRC+VS T+I+++
Sbjct: 519 SDFDLSLRCAVSPTLIRTS 575
Score = 174 bits (374), Expect = 3e-043
Identities = 83/133 (62%), Positives = 93/133 (69%)
Frame = -3 / -3
Query: 410 LITVRLTEQRRDRSKSDSMMWPSSRTRTFSGLRSRYIIPSICRYSNARSTSAT*NFAACS 231
LI V T R+RSKS+S+MWPSSRTRTFSG +S PS+ RYS+A TSA *N AA S
Sbjct: 568 LIRVGETAHLRERSKSESIMWPSSRTRTFSGFKSL*TTPSM*RYSSANKTSAA*NLAAYS 389
Query: 230 EKYFPGCLWRRV*RSPPGQNSITKHENLSVSK*VYRVGRNGWSRDCXXXXXXXXXXXXXR 51
EK FPGC RV RSPPGQ SITKHENLSVSK*VY+VGRNG S +C
Sbjct: 388 EKCFPGCRCLRVCRSPPGQYSITKHENLSVSK*VYKVGRNG*SNNCKISLSV*ALVNFFL 209
Query: 50 LAKEVLSITFMAK 12
LA+E LSITF+AK
Sbjct: 208 LAREALSITFIAK 170
Score = 135 bits (289), Expect = 2e-031
Identities = 61/128 (47%), Positives = 87/128 (67%)
Frame = -2 / -2
Query: 387 TAKR*IEVRQHDVAIFPNEDILWFKITVYNPKHMQVFQCKEHLSYIELCCLL*KIFSRLP 208
T+K ++V +H VAI ++DI F+++V N KH+++F+C+ +L I+ C +L K+F RL
Sbjct: 545 TSKGKVKV*KHYVAIITDKDIFRFQVSVNNSKHVKIFKCQ*NLCRIKSCSILRKMFPRLS 366
Query: 207 LAKSVKIPSRAEFHNQA*KLVCLKVSIQGW*KWMVQGLQDLPLGLSSKQLLPTCQRSLIH 28
L +SV+I S FH Q *+ VCLK+SIQ KWM+Q LQ+LP LS QL P C+ SL+H
Sbjct: 365 LPQSVQITSWTVFHYQT*ESVCLKMSIQSRQKWMIQQLQNLPFCLSPCQLFPACKGSLVH 186
Query: 27 NLHGKVTP 4
H K TP
Sbjct: 185 YFHCKKTP 162
Score = 109 bits (232), Expect = 1e-023
Identities = 59/129 (45%), Positives = 68/129 (52%)
Frame = +2 / +1
Query: 5 GVTLP*RLWIRLLWQVGRSCFELRPSGRSCSPWTIHFYQPCILTLRQTSFHAWLWNSALE 184
GV L *+ W RL Q G+S LR GR CS W IHF + CIL LRQT H W WN+ E
Sbjct: 163 GVFLQ*K*WTRLPLQAGKS*QGLRQKGRFCSCWIIHFCRLCILILRQTDSHVW*WNTVQE 342
Query: 185 GIFTLFAKGSLENIFQSKQQSSM*LRCSLHWNTCICLGLYTVILNQRMSSFGKMATSCCR 364
I TL +L NIF S Q M R H N CL L+T N +MS MAT C +
Sbjct: 343 VICTL*GNDNLGNIFLSMLQDFMRQRFYWHLNIFTCLELFTET*NLKMSLSVMMAT*CFQ 522
Query: 365 TSIYLFAVQ 391
T + VQ
Sbjct: 523 TLTFPLDVQ 549
>gb|CF230847.1|CF230847 PtaC0014A4A0402 Poplar cDNA library from cambial zone Populus alba
x Populus tremula cDNA 5', mRNA sequence
Length = 702
Score = 294 bits (636), Expect = 3e-079
Identities = 119/139 (85%), Positives = 131/139 (94%)
Frame = +1 / +1
Query: 1 TRSYFAMKVMDKTSLASRKKLLRAQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCP 180
TR +FAMKVMDK SLASRKKL RAQTEREILQ LDHPFLPTLYTHFETD+FSCLVME+CP
Sbjct: 4 TRCFFAMKVMDKASLASRKKLTRAQTEREILQLLDHPFLPTLYTHFETDRFSCLVMEYCP 183
Query: 181 GGDLHTLRQRQPGKYFSEQAAKFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIML 360
GGDLHTLRQRQPGK+FSE AA+FY AEVLLALEYLHMLG++YRDLKPENVLVR+DGHIML
Sbjct: 184 GGDLHTLRQRQPGKHFSEHAARFYAAEVLLALEYLHMLGVVYRDLKPENVLVRDDGHIML 363
Query: 361 SDFDLSLRCSVSLTVIKSA 417
SDFDLSLRC+VS T I+++
Sbjct: 364 SDFDLSLRCAVSPTXIRTS 420
Score = 182 bits (393), Expect = 8e-046
Identities = 85/133 (63%), Positives = 95/133 (71%)
Frame = -3 / -2
Query: 410 LITVRLTEQRRDRSKSDSMMWPSSRTRTFSGLRSRYIIPSICRYSNARSTSAT*NFAACS 231
LI V T R+RSKS+S+MWPSSRTRTFSG RS PS+ RYS+A TSA *N AACS
Sbjct: 413 LIXVGETAHLRERSKSESIMWPSSRTRTFSGFRSL*TTPSMWRYSSANKTSAA*NLAACS 234
Query: 230 EKYFPGCLWRRV*RSPPGQNSITKHENLSVSK*VYRVGRNGWSRDCXXXXXXXXXXXXXR 51
EK FPGC RV*RSPPGQ SITKHENLSVSK*VY+VGRNG S +C
Sbjct: 233 EKCFPGCRCLRV*RSPPGQYSITKHENLSVSK*VYKVGRNG*SNNCKISLSV*ALVNFFL 54
Query: 50 LAKEVLSITFMAK 12
LA++ LSITF+AK
Sbjct: 53 LARDALSITFIAK 15
Score = 124 bits (265), Expect = 4e-028
Identities = 58/128 (45%), Positives = 84/128 (65%)
Frame = -2 / -1
Query: 387 TAKR*IEVRQHDVAIFPNEDILWFKITVYNPKHMQVFQCKEHLSYIELCCLL*KIFSRLP 208
T+K +++ +H VA+ + DI F+++V KH+++F+C+ +L I+ +L K+FSRL
Sbjct: 390 TSKGKVKI*KHYVAVITD*DIFRFQVSVDYSKHVEIFKCQ*NLGRIKSGSMLGKMFSRLS 211
Query: 207 LAKSVKIPSRAEFHNQA*KLVCLKVSIQGW*KWMVQGLQDLPLGLSSKQLLPTCQRSLIH 28
L +SVKI FHNQ *+ VCLK+SI KWM+Q LQ+LP LSS QL P C+ L+H
Sbjct: 210 LPQSVKITPWTIFHNQT*ESVCLKMSI*SRQKWMIQQLQNLPFCLSSCQLFPACKGCLVH 31
Query: 27 NLHGKVTP 4
H K TP
Sbjct: 30 YFHCKKTP 7
>gb|BI139484.1|BI139484 F132P54Y Populus flower cDNA library Populus trichocarpa cDNA, mRNA
sequence
Length = 430
Score = 278 bits (602), Expect = 1e-074
Identities = 114/134 (85%), Positives = 126/134 (94%)
Frame = +1 / +3
Query: 46 ASRKKLLRAQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKY 225
ASRKKLLRAQTEREILQSLDHPFLPTLYTHFETDKFSCL+MEFCPGGDLHTLRQR PGK+
Sbjct: 3 ASRKKLLRAQTEREILQSLDHPFLPTLYTHFETDKFSCLLMEFCPGGDLHTLRQRLPGKH 182
Query: 226 FSEQAAKFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCSVSLTV 405
F EQA KFYVAEVLLALEYLHMLGIIYRDLKPENVLVR+DGHIMLSDFDLSLRC+VS T+
Sbjct: 183 FQEQAVKFYVAEVLLALEYLHMLGIIYRDLKPENVLVRDDGHIMLSDFDLSLRCTVSPTL 362
Query: 406 IKSANPGLDAMQRN 447
+K+A+ + +++N
Sbjct: 363 VKTASLESEPLRKN 404
Score = 169 bits (364), Expect = 8e-042
Identities = 78/108 (72%), Positives = 85/108 (78%)
Frame = -3 / -1
Query: 416 ADLITVRLTEQRRDRSKSDSMMWPSSRTRTFSGLRSRYIIPSICRYSNARSTSAT*NFAA 237
A L V LT QRR+RSKS+S++ PSS TRTFSGLRSR IIPSIC+YS A TSAT*NF A
Sbjct: 373 AVLTRVGLTVQRRERSKSESIICPSSLTRTFSGLRSR*IIPSICKYSKASRTSAT*NFTA 194
Query: 236 CSEKYFPGCLWRRV*RSPPGQNSITKHENLSVSK*VYRVGRNGWSRDC 93
CS K FPG L RV +SPPGQNSI + ENLSVSK V RVGR GWSRDC
Sbjct: 193 CS*KCFPGSLCLRVCKSPPGQNSINRQENLSVSKWV*RVGRKGWSRDC 50
Score = 131 bits (281), Expect = 2e-030
Identities = 62/135 (45%), Positives = 83/135 (61%)
Frame = +3 / +2
Query: 48 KSEEAASSSDRAGDPAVPGPSISTNPVYSL*DRQVFMLGYGILPWRGSSHSSPKAAWKIF 227
+S+EAAS SDR + A+ GPS +N ++ L*DR + + G+L WR +HS +AA + F
Sbjct: 5 QSQEAASGSDRKRNIAISGPSFPSNSLHPL*DR*ILLSINGVLSWRRLAHSQTEAARETF 184
Query: 228 FRASSKVLCS*GAPCIGIPAYAWDYIP*S*TRECPRSGRWPHHAVGLRSISSLFSEPNGD 407
RA SKVLCS G GI AYAWDY+P*S* R+CP G W ++A+ L L+ +PN
Sbjct: 185 SRAGSKVLCSRGPASFGIFAYAWDYLP*S*ARKCPCEG*WAYNALRL*PFPPLYCQPNSC 364
Query: 408 QVRKSWPRCNAEEQC 452
Q S R +E C
Sbjct: 365 QNSIS*VRAVTKEPC 409
Score = 123 bits (263), Expect = 7e-028
Identities = 57/123 (46%), Positives = 77/123 (62%)
Frame = -2 / -3
Query: 417 CGLDHR*AH*TAKR*IEVRQHDVAIFPNEDILWFKITVYNPKHMQVFQCKEHLSYIELCC 238
C D A T + ++V +H + I P++DI W KITV NPKHMQ+FQ + L YI+L C
Sbjct: 374 CCFDKSWADSTTEGKVKVGEHYMPIIPHKDIFWLKITVNNPKHMQIFQS*QDLCYIKLYC 195
Query: 237 LL*KIFSRLPLAKSVKIPSRAEFHNQA*KLVCLKVSIQGW*KWMVQGLQDLPLGLSSKQL 58
LL K+F PL++SV++ SR E H + +CLKV ++ W + MVQ LQ LS KQL
Sbjct: 194 LLLKMFPWQPLSESVQVSSRTELH**TREFICLKVGVESWKERMVQRLQYFSFCLSPKQL 15
Query: 57 LPT 49
L T
Sbjct: 14 LAT 6
Score = 103 bits (219), Expect = 8e-022
Identities = 51/106 (48%), Positives = 63/106 (59%)
Frame = +2 / +1
Query: 50 VGRSCFELRPSGRSCSPWTIHFYQPCILTLRQTSFHAWLWNSALEGIFTLFAKGSLENIF 229
V RSCF LR + C+ WTI +Q TLRQ + + W+S LE TL +G NIF
Sbjct: 7 VARSCFGLRQKEKYCNLWTILSFQLSTPTLRQINSLVY*WSSVLEETCTLSDRGCQGNIF 186
Query: 230 QSKQQSSM*LRCSLHWNTCICLGLYTVILNQRMSSFGKMATSCCRT 367
+S+Q S M* R WN CICLGL+TVIL+Q+MS G M C T
Sbjct: 187 KSRQ*SFM*QRSC*LWNICICLGLFTVILSQKMSL*GMMGI*CSPT 324
>gb|DT480100.1|DT480100 WS02527.BR_O22 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02527_O22 5', mRNA sequence
Length = 817
Score = 271 bits (586), Expect = 2e-072
Identities = 112/120 (93%), Positives = 116/120 (96%)
Frame = +1 / +3
Query: 1 TRSYFAMKVMDKTSLASRKKLLRAQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCP 180
T+ YFAMKVMDK SLASRKKLLRAQTEREILQSLDHPFLP+LYTHFETDKFSCLVMEFCP
Sbjct: 456 TKCYFAMKVMDKGSLASRKKLLRAQTEREILQSLDHPFLPSLYTHFETDKFSCLVMEFCP 635
Query: 181 GGDLHTLRQRQPGKYFSEQAAKFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIML 360
GGDLHTLRQRQPGK+F EQA KFYVAEVLLALEYLHMLGIIYRDLKPENVLVR+DGHIML
Sbjct: 636 GGDLHTLRQRQPGKHFLEQAVKFYVAEVLLALEYLHMLGIIYRDLKPENVLVRDDGHIML 815
Score = 167 bits (360), Expect = 3e-041
Identities = 77/118 (65%), Positives = 87/118 (73%)
Frame = -3 / -1
Query: 362 DSMMWPSSRTRTFSGLRSRYIIPSICRYSNARSTSAT*NFAACSEKYFPGCLWRRV*RSP 183
+S++ PSS TRTFSGLRSR +IPSIC+YS A TSAT*NF ACS K FPGCL RV +SP
Sbjct: 817 ESIICPSSLTRTFSGLRSR*MIPSICKYSKASRTSAT*NFTACSRKCFPGCLCLRVCKSP 638
Query: 182 PGQNSITKHENLSVSK*VYRVGRNGWSRDCXXXXXXXXXXXXXRLAKEVLSITFMAK* 9
PGQNSIT+HENLSVSK V GR GWS+DC RLA+E LSITF+AK*
Sbjct: 637 PGQNSITRHENLSVSKWV*SDGRKGWSKDCNISLSV*ARSSFLRLAREPLSITFIAK* 464
Score = 138 bits (297), Expect = 1e-032
Identities = 61/118 (51%), Positives = 82/118 (69%)
Frame = -2 / -3
Query: 360 QHDVAIFPNEDILWFKITVYNPKHMQVFQCKEHLSYIELCCLL*KIFSRLPLAKSVKIPS 181
+H ++I P++DILW KITV +PKHMQ+FQ ++L YI+ CLL K+F LPL KSV+I S
Sbjct: 815 EHYMSIIPHKDILWLKITVNDPKHMQIFQS*QNLCYIKFYCLLQKVFPWLPLPKSVQISS 636
Query: 180 RAEFHNQA*KLVCLKVSIQGW*KWMVQGLQDLPLGLSSKQLLPTCQRSLIHNLHGKVT 7
R E H Q *K +C KV ++ + +VQ LQ L LS KQLL T +R+ +H LH K+T
Sbjct: 635 RTELHYQT*KFICFKVGVERRKERVVQRLQYFSLCLSPKQLLTTGKRTFVHYLHCKIT 462
Score = 119 bits (254), Expect = 1e-026
Identities = 56/118 (47%), Positives = 76/118 (64%)
Frame = +3 / +2
Query: 9 LLCHEGYG*DFFGKSEEAASSSDRAGDPAVPGPSISTNPVYSL*DRQVFMLGYGILPWRG 188
L C+EG G F +S EAAS SDR + A+ GP + ++ L*+R +FM G G+L WR
Sbjct: 464 LFCNEGNGQRFSCQS*EAASGSDRERNIAIFGPPFPSVALHPL*NR*IFMSGNGVLSWRR 643
Query: 189 SSHSSPKAAWKIFFRASSKVLCS*GAPCIGIPAYAWDYIP*S*TRECPRSGRWPHHAV 362
+HS +AA + A SK+LCS G+ GI AYAWD++P*S* RECP G W ++A+
Sbjct: 644 FAHS*AEAARETLSGAGSKILCSRGSASFGIFAYAWDHLP*S*ARECPCEG*WTYNAL 817
Score = 116 bits (249), Expect = 6e-026
Identities = 56/117 (47%), Positives = 70/117 (59%)
Frame = +2 / +1
Query: 8 VTLP*RLWIRLLWQVGRSCFELRPSGRSCSPWTIHFYQPCILTLRQTSFHAWLWNSALEG 187
V L *R W ++L V RSCF LR + C+ WT ++ TL+Q +FH W W+S LE
Sbjct: 463 VILQ*R*WTKVLLPVVRSCFGLRQREKYCNLWTTLSFRRSTPTLKQINFHVW*WSSVLEE 642
Query: 188 IFTLFAKGSLENIFQSKQQSSM*LRCSLHWNTCICLGLYTVILNQRMSSFGKMATSC 358
I TL +GS N F S+Q + M* R WN CICLG +TVIL+QRMS G M C
Sbjct: 643 ICTLLGRGSQGNTFWSRQ*NFM*QRFC*LWNICICLGSFTVILSQRMSL*GMMDI*C 813
>gb|CN519695.1|CN519695 GQ0104.B3_A16 GQ010 Populus trichocarpa x Populus deltoides cDNA
clone GQ0104_A16 5', mRNA sequence
Length = 839
Score = 223 bits (482), Expect = 4e-058
Identities = 91/142 (64%), Positives = 111/142 (78%)
Frame = +1 / +1
Query: 10 YFAMKVMDKTSLASRKKLLRAQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGD 189
+FA KVMDK L SR K RA+TEREIL++LDHPFLPTLY +T ++ CL+ EFC GGD
Sbjct: 307 FFAAKVMDKKELVSRNKEGRARTEREILETLDHPFLPTLYAFIDTQRWLCLLTEFCSGGD 486
Query: 190 LHTLRQRQPGKYFSEQAAKFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDF 369
LH LRQRQP K F E A +FY +EV++ALEYLHM+GI+YRDLKPENVLVR DGHIML+DF
Sbjct: 487 LHVLRQRQPLKRFEETAVRFYASEVIVALEYLHMMGIVYRDLKPENVLVRSDGHIMLTDF 666
Query: 370 DLSLRCSVSLTVIKSANPGLDA 435
DLSL+C S + + + +DA
Sbjct: 667 DLSLKCDDSTSTPQIISDKIDA 732
Score = 112 bits (240), Expect = 1e-024
Identities = 61/122 (50%), Positives = 67/122 (54%)
Frame = -3 / -1
Query: 377 DRSKSDSMMWPSSRTRTFSGLRSRYIIPSICRYSNARSTSAT*NFAACSEKYFPGCLWRR 198
+RSKS S++ PS RTRTFSGLRSR IP I RYS A TS *N A S GC RR
Sbjct: 674 ERSKSVSII*PSDRTRTFSGLRSR*TIPII*RYSKATITSDA*NLTAVSSNRLRGCR*RR 495
Query: 197 V*RSPPGQNSITKHENLSVSK*VYRVGRNGWSRDCXXXXXXXXXXXXXRLAKEVLSITFM 18
*RSPP QNS+ KH + VS Y VG+NG S L LSITF
Sbjct: 494 T*RSPPEQNSVNKHSHR*VSIKAYNVGKNG*SSVSSISRSVLALPSLFLLTSSFLSITFA 315
Query: 17 AK 12
AK
Sbjct: 314 AK 309
>gb|DT474220.1|DT474220 WS01231.BR_D17 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01231_D17 5', mRNA sequence
Length = 925
Score = 174 bits (375), Expect(2) = 2e-057
Identities = 71/97 (73%), Positives = 81/97 (83%)
Frame = +1 / +3
Query: 1 TRSYFAMKVMDKTSLASRKKLLRAQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCP 180
T FA+KVMD LA+RKK+ RA TER+ILQ LDHPFLPTLY HF +DK SCLVME+CP
Sbjct: 549 TNCLFALKVMDNDYLATRKKMSRALTERKILQMLDHPFLPTLYAHFVSDKLSCLVMEYCP 728
Query: 181 GGDLHTLRQRQPGKYFSEQAAKFYVAEVLLALEYLHM 291
GGDLH LRQ+Q G+ FSE AA+FYVAEVL+ALEYLHM
Sbjct: 729 GGDLHVLRQKQSGRSFSEPAARFYVAEVLVALEYLHM 839
Score = 92.3 bits (195), Expect(2) = 9e-026
Identities = 46/95 (48%), Positives = 55/95 (57%)
Frame = -3 / -1
Query: 299 IPSICRYSNARSTSAT*NFAACSEKYFPGCLWRRV*RSPPGQNSITKHENLSVSK*VYRV 120
+ ++C+YS+A TSAT*N AA SEK P C R RSPPGQ SIT+ E+LS +K Y V
Sbjct: 847 LQAMCKYSSATRTSAT*NLAAGSEKLLPDCFCRSTCRSPPGQYSITRQESLSDTKWAYNV 668
Query: 119 GRNGWSRDCXXXXXXXXXXXXXRLAKEVLSITFMA 15
GR G S C +AK LSITF A
Sbjct: 667 GRKG*SSICKIFLSVRALDIFFLVAK*SLSITFKA 563
Score = 67.5 bits (141), Expect(2) = 2e-057
Identities = 25/28 (89%), Positives = 28/28 (100%)
Frame = +1 / +1
Query: 292 LGIIYRDLKPENVLVREDGHIMLSDFDL 375
LG++YRDLKPEN+LVREDGHIMLSDFDL
Sbjct: 841 LGVVYRDLKPENILVREDGHIMLSDFDL 924
Score = 43.7 bits (89), Expect(2) = 9e-026
Identities = 19/28 (67%), Positives = 22/28 (78%)
Frame = -3 / -3
Query: 374 RSKSDSMMWPSSRTRTFSGLRSRYIIPS 291
RSKS+SM+ PSSRTR FSG +SR PS
Sbjct: 923 RSKSESMICPSSRTRIFSGFKSR*TTPS 840
>gb|CF230452.1|CF230452 Ptac0008E4E0410 Poplar cDNA library from cambial zone Populus alba
x Populus tremula cDNA 5', mRNA sequence
Length = 749
Score = 215 bits (463), Expect = 2e-055
Identities = 87/126 (69%), Positives = 104/126 (82%)
Frame = +1 / +2
Query: 7 SYFAMKVMDKTSLASRKKLLRAQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGG 186
++FA KVMDK LASR K RA+TEREIL++LDHPFLP LY +T ++ CL+ EFCPGG
Sbjct: 326 TFFAAKVMDKKELASRNKEGRARTEREILETLDHPFLPALYAFIDTQRWLCLLTEFCPGG 505
Query: 187 DLHTLRQRQPGKYFSEQAAKFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSD 366
DLH LRQRQP K F E A +FY +EV++ALEYLHM+GI YRDLKPENVLVR +GHIML+D
Sbjct: 506 DLHVLRQRQPLKRFEETAVRFYASEVIVALEYLHMMGIGYRDLKPENVLVRSNGHIMLTD 685
Query: 367 FDLSLR 384
FDLSL+
Sbjct: 686 FDLSLK 703
Score = 112 bits (239), Expect = 1e-024
Identities = 60/122 (49%), Positives = 67/122 (54%)
Frame = -3 / -3
Query: 377 DRSKSDSMMWPSSRTRTFSGLRSRYIIPSICRYSNARSTSAT*NFAACSEKYFPGCLWRR 198
+RSKS S++ P RTRTFSGLRSR IP I RYS A TS *N A S GC RR
Sbjct: 696 ERSKSVSIIXPFDRTRTFSGLRSR*PIPII*RYSKATITSDA*NLTAVSSNRLRGCR*RR 517
Query: 197 V*RSPPGQNSITKHENLSVSK*VYRVGRNGWSRDCXXXXXXXXXXXXXRLAKEVLSITFM 18
*RSPPGQNS+ +H + VS Y G+NG S LA LSITF
Sbjct: 516 T*RSPPGQNSVNRHSHR*VSIKAYNAGKNG*SSVSSISRSVLALPSLFLLASSFLSITFA 337
Query: 17 AK 12
AK
Sbjct: 336 AK 331
>gb|DV463799.1|DV463799 MTUNUL1.P2.E10 NUL Populus fremontii x Populus angustifolia cDNA,
mRNA sequence
Length = 756
Score = 193 bits (416), Expect = 6e-049
Identities = 79/147 (53%), Positives = 105/147 (71%)
Frame = +1 / +3
Query: 13 FAMKVMDKTSLASRKKLLRAQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDL 192
+AMK M+K+ + +R K+ RA EREI+ LDHPFLPTLY+ F+T CL+ +F PGG+L
Sbjct: 198 YAMKAMEKSIMLNRNKVHRACIEREIISHLDHPFLPTLYSSFQTSTHVCLITDFFPGGEL 377
Query: 193 HTLRQRQPGKYFSEQAAKFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFD 372
L +QP K F+E++A+FY AEV++ LEYLH LGI+YRDLKPEN+L+++DGHI LSDFD
Sbjct: 378 FGLLDKQPMKLFNEESARFYAAEVVIGLEYLHCLGIVYRDLKPENILLQKDGHIALSDFD 557
Query: 373 LSLRCSVSLTVIKSANPGLDAMQRNNA 453
LS S +IK A P R+ A
Sbjct: 558 LSFLTSCKPQIIKHAPPNKRRRSRSQA 638
>gb|BU891247.1|BU891247 P047G09 Populus petioles cDNA library Populus tremula cDNA 5 prime,
mRNA sequence
Length = 569
Score = 186 bits (400), Expect = 9e-047
Identities = 74/126 (58%), Positives = 92/126 (73%)
Frame = +1 / +3
Query: 1 TRSYFAMKVMDKTSLASRKKLLRAQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCP 180
T +FAMK MDK ++ +R K+ RA EREIL LDHPFLP LY F+T CL+ ++CP
Sbjct: 183 TGQFFAMKTMDKAAMLNRNKVHRACAEREILDMLDHPFLPALYASFQTKTHICLITDYCP 362
Query: 181 GGDLHTLRQRQPGKYFSEQAAKFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIML 360
GG+L L RQP K E A +FY AEV++ALEYLH GIIYRDLKPENVL++ +GH+ L
Sbjct: 363 GGELFLLLDRQPKKVLKEDAVRFYAAEVVIALEYLHCQGIIYRDLKPENVLLQSNGHVAL 542
Query: 361 SDFDLS 378
+DFDLS
Sbjct: 543 TDFDLS 560
>gb|DN496222.1|DN496222 P047G09.5pR Populus petioles cDNA library Populus tremula cDNA
clone P047G09 5', mRNA sequence
Length = 676
Score = 186 bits (400), Expect = 9e-047
Identities = 74/126 (58%), Positives = 92/126 (73%)
Frame = +1 / +3
Query: 1 TRSYFAMKVMDKTSLASRKKLLRAQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCP 180
T +FAMK MDK ++ +R K+ RA EREIL LDHPFLP LY F+T CL+ ++CP
Sbjct: 60 TGQFFAMKTMDKAAMLNRNKVHRACAEREILDMLDHPFLPALYASFQTKTHICLITDYCP 239
Query: 181 GGDLHTLRQRQPGKYFSEQAAKFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIML 360
GG+L L RQP K E A +FY AEV++ALEYLH GIIYRDLKPENVL++ +GH+ L
Sbjct: 240 GGELFLLLDRQPKKVLKEDAVRFYAAEVVIALEYLHCQGIIYRDLKPENVLLQSNGHVAL 419
Query: 361 SDFDLS 378
+DFDLS
Sbjct: 420 TDFDLS 437
>gb|BU831403.1|BU831403 T021A10 Populus apical shoot cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 697
Score = 173 bits (373), Expect = 5e-043
Identities = 70/103 (67%), Positives = 82/103 (79%)
Frame = +1 / +2
Query: 10 YFAMKVMDKTSLASRKKLLRAQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGD 189
++AMKV+DK +LA R KL RA+ E+EIL LDHPFLPTLY FE +SCLV E+CPGGD
Sbjct: 389 FYAMKVVDKEALAIRNKLQRAEMEKEILGMLDHPFLPTLYAEFEASHYSCLVTEYCPGGD 568
Query: 190 LHTLRQRQPGKYFSEQAAKFYVAEVLLALEYLHMLGIIYRDLK 318
L+ RQRQP K FS +AKFY AE LLALEYLHM+GI+YRDLK
Sbjct: 569 LYAARQRQPWKRFSISSAKFYAAETLLALEYLHMMGIVYRDLK 697
>gb|BI070498.1|BI070498 C039P08U Populus strain T89 leaves Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 416
Score = 96.4 bits (204), Expect(4) = 7e-043
Identities = 39/42 (92%), Positives = 40/42 (95%)
Frame = +1 / +1
Query: 178 PGGDLHTLRQRQPGKYFSEQAAKFYVAEVLLALEYLHMLGII 303
PGGDLHTLRQRQPGK+F EQA KFYVAEVLLALEYLHMLGII
Sbjct: 127 PGGDLHTLRQRQPGKHFQEQAVKFYVAEVLLALEYLHMLGII 252
Score = 81.7 bits (172), Expect(4) = 7e-043
Identities = 33/33 (100%), Positives = 33/33 (100%)
Frame = +1 / +3
Query: 52 RKKLLRAQTEREILQSLDHPFLPTLYTHFETDK 150
RKKLLRAQTEREILQSLDHPFLPTLYTHFETDK
Sbjct: 3 RKKLLRAQTEREILQSLDHPFLPTLYTHFETDK 101
Score = 25.4 bits (49), Expect(4) = 7e-043
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +1 / +3
Query: 304 YRDLKPENVL 333
YRDLKPEN L
Sbjct: 252 YRDLKPENAL 281
Score = 22.6 bits (43), Expect(4) = 7e-043
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = +1 / +2
Query: 154 SCLVMEFC 177
SCL+MEFC
Sbjct: 104 SCLLMEFC 127
>gb|CN518806.1|CN518806 GQ0102.B3_C22 GQ010 Populus trichocarpa x Populus deltoides cDNA
clone GQ0102_C22 5', mRNA sequence
Length = 528
Score = 172 bits (370), Expect = 1e-042
Identities = 71/82 (86%), Positives = 75/82 (91%)
Frame = +1 / +1
Query: 1 TRSYFAMKVMDKTSLASRKKLLRAQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCP 180
TR +FAMKVMDK SLASRKKL RAQTEREILQ LDHPFLPTLYTHFETD+FSCLVME P
Sbjct: 241 TRCFFAMKVMDKASLASRKKLTRAQTEREILQLLDHPFLPTLYTHFETDRFSCLVMEXXP 420
Query: 181 GGDLHTLRQRQPGKYFSEQAAK 246
GGDLHTLRQRQPGK+FSE AA+
Sbjct: 421 GGDLHTLRQRQPGKHFSEYAAR 486
Score = 101 bits (215), Expect = 3e-021
Identities = 48/77 (62%), Positives = 52/77 (67%)
Frame = -3 / -2
Query: 242 AACSEKYFPGCLWRRV*RSPPGQNSITKHENLSVSK*VYRVGRNGWSRDCXXXXXXXXXX 63
AA SEK FPGC RV RSPPG SITKHENLSVSK*VY+VGRNG S +C
Sbjct: 482 AAYSEKCFPGCRCLRVCRSPPGXXSITKHENLSVSK*VYKVGRNG*SNNCKISLSV*ALV 303
Query: 62 XXXRLAKEVLSITFMAK 12
LA+E LSITF+AK
Sbjct: 302 NFFLLAREALSITFIAK 252
>gb|BI136266.1|BI136266 F065P78Y Populus flower cDNA library Populus trichocarpa cDNA, mRNA
sequence
Length = 485
Score = 165 bits (354), Expect = 2e-040
Identities = 67/71 (94%), Positives = 69/71 (97%)
Frame = +1 / +3
Query: 1 TRSYFAMKVMDKTSLASRKKLLRAQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCP 180
T+ YFAMKVMDK SLASRKKLLRAQTEREILQSLDHPFLPTLYTHFETDKFSCL+MEFCP
Sbjct: 273 TKCYFAMKVMDKGSLASRKKLLRAQTEREILQSLDHPFLPTLYTHFETDKFSCLLMEFCP 452
Query: 181 GGDLHTLRQRQ 213
GGDLHTLRQRQ
Sbjct: 453 GGDLHTLRQRQ 485
>gb|BI136871.1|BI136871 F075P74Y Populus flower cDNA library Populus trichocarpa cDNA, mRNA
sequence
Length = 461
Score = 147 bits (316), Expect = 3e-035
Identities = 59/66 (89%), Positives = 63/66 (95%)
Frame = +1 / +2
Query: 1 TRSYFAMKVMDKTSLASRKKLLRAQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCP 180
T+ YFAMKVMDK SLASRKKLLRAQTEREI QSLDHPFLPTLYTHFETDK+SCL+ME+CP
Sbjct: 263 TKCYFAMKVMDKGSLASRKKLLRAQTEREI*QSLDHPFLPTLYTHFETDKYSCLLMEYCP 442
Query: 181 GGDLHT 198
GGDLHT
Sbjct: 443 GGDLHT 460
>gb|BU836496.1|BU836496 T087C12 Populus apical shoot cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 724
Score = 122 bits (262), Expect = 1e-027
Identities = 49/57 (85%), Positives = 56/57 (98%)
Frame = +1 / +1
Query: 247 FYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCSVSLTVIKSA 417
FYVAEVLLALEYLHMLG++YRDLKPEN+LVREDGHIML+DFDLSLRCSVS T+++SA
Sbjct: 4 FYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLTDFDLSLRCSVSPTLLRSA 174
>gb|DN499789.1|DN499789 T087C12.5pR Populus shoot meristem cDNA library Populus tremula x
Populus tremuloides cDNA clone T087C12 5', mRNA sequence
Length = 852
Score = 122 bits (262), Expect = 1e-027
Identities = 49/57 (85%), Positives = 56/57 (98%)
Frame = +1 / +3
Query: 247 FYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCSVSLTVIKSA 417
FYVAEVLLALEYLHMLG++YRDLKPEN+LVREDGHIML+DFDLSLRCSVS T+++SA
Sbjct: 3 FYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLTDFDLSLRCSVSPTLLRSA 173
>gb|CV242880.1|CV242880 WS02516.B21.1_E18 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02516_E18 3', mRNA sequence
Length = 789
Score = 114 bits (243), Expect = 4e-025
Identities = 44/81 (54%), Positives = 61/81 (75%)
Frame = +1 / -2
Query: 181 GGDLHTLRQRQPGKYFSEQAAKFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIML 360
GG+L+ L +QP F E++A+FY AEV++ EYLH LG++YRDLKPEN+++++DGHI+L
Sbjct: 788 GGELYALLDKQPMNLFKEESARFYAAEVVIGSEYLHCLGMVYRDLKPENIVLQKDGHIVL 609
Query: 361 SDFDLSLRCSVSLTVIKSANP 423
SDFDLS S +IK A P
Sbjct: 608 SDFDLSFLTSCKPQIIKHAPP 546
>gb|BP925803.1|BP925803 BP925803 full-length enriched poplar cDNA library Populus nigra
cDNA clone PnFL1-050_O04.f 5', mRNA sequence
Length = 226
Score = 106 bits (227), Expect = 7e-023
Identities = 41/51 (80%), Positives = 50/51 (98%)
Frame = +1 / +1
Query: 265 LLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCSVSLTVIKSA 417
LLA+EYLHMLG++YRDLKPEN+LVREDGHIML+DFDLSLRCSVS T+++S+
Sbjct: 1 LLAMEYLHMLGVVYRDLKPENILVREDGHIMLTDFDLSLRCSVSPTLLRSS 153
Database: Populus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:49 PM
Number of letters in database: 203,408,664
Number of sequences in database: 369,679
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 249,558,502
Number of Sequences: 369679
Number of extensions: 3634791
Number of successful extensions: 89248
Number of sequences better than 1.0e-020: 26
length of database: 67,802,888
effective HSP length: 50
effective length of database: 49,318,938
effective search space used: 4981212738
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)