TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QCF2e06.yg.2.1
(319 letters)
Database: Populus_nucl_with_EST.fasta
369,679 sequences; 203,408,664 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AY341026.1| Populus tremuloides sucrose synthase mRNA, c... 182 7e-046
gb|BI131617.1|BI131617 G123P33Y Populus cambium cDNA librar... 181 1e-045
gb|BI131633.1|BI131633 G123P53Y Populus cambium cDNA librar... 181 1e-045
gb|CF234998.1|CF234998 PtaJXT0017F5F0511 Poplar cDNA librar... 181 1e-045
gb|CN519255.1|CN519255 GQ0104.B3_D16 GQ010 Populus trichoca... 178 9e-045
gb|CF235850.1|CF235850 PtaJXT0027G3G0313 Poplar cDNA librar... 177 2e-044
gb|CK320848.1|CK320848 X9SP07c09 Populus stem seasonal libr... 172 5e-043
gb|BI128740.1|BI128740 G080P72Y Populus cambium cDNA librar... 171 1e-042
gb|BI131657.1|BI131657 G123P87Y Populus cambium cDNA librar... 169 7e-042
gb|CN517737.1|CN517737 GQ0094.B3_L08 GQ009 Populus trichoca... 165 1e-040
gb|CN550192.1|CN550192 GQ0242.B3_D19 GQ024 Populus trichoca... 162 6e-040
gb|BI129619.1|BI129619 G093P35Y Populus cambium cDNA librar... 162 8e-040
gb|CF120071.1|CF120071 MTU10CS.P9.H09 Aspen stem cDNA Libra... 161 1e-039
gb|AJ771680.1|AJ771680 AJ771680 Populus euphratica root 3-6... 156 3e-038
gb|AJ772013.1|AJ772013 AJ772013 Populus euphratica root 3-6... 156 3e-038
gb|AJ780505.1|AJ780505 AJ780505 Populus euphratica leaf 3-6... 156 3e-038
gb|CA932243.1|CA932243 MTU5CS.P10.E03 Aspen stem cDNA Libra... 156 5e-038
gb|CA932252.1|CA932252 MTU5CS.P10.F03 Aspen stem cDNA Libra... 156 5e-038
gb|CA932744.1|CA932744 MTU5CS.P16.H05 Aspen stem cDNA Libra... 156 5e-038
gb|CA932813.1|CA932813 MTU5CS.P17.G08 Aspen stem cDNA Libra... 156 5e-038
gb|CA932828.1|CA932828 MTU5CS.P18.A04 Aspen stem cDNA Libra... 156 5e-038
gb|CA932877.1|CA932877 MTU5CS.P18.F07 Aspen stem cDNA Libra... 156 5e-038
gb|CA932895.1|CA932895 MTU5CS.P18.H07 Aspen stem cDNA Libra... 156 5e-038
gb|CA932974.1|CA932974 MTU5CS.P1.H02 Aspen stem cDNA Librar... 156 5e-038
gb|CA933144.1|CA933144 MTU5CS.P4.A08 Aspen stem cDNA Librar... 156 5e-038
gb|CA933178.1|CA933178 MTU5CS.P4.E02 Aspen stem cDNA Librar... 156 5e-038
gb|CA933427.1|CA933427 MTU5CS.P7.H09 Aspen stem cDNA Librar... 156 5e-038
gb|CF119276.1|CF119276 MTU10CS.P15.G02 Aspen stem cDNA Libr... 156 5e-038
gb|CF119592.1|CF119592 MTU10CS.P3.H02 Aspen stem cDNA Libra... 156 5e-038
gb|CF119738.1|CF119738 MTU10CS.P5.G02 Aspen stem cDNA Libra... 156 5e-038
gb|BI131553.1|BI131553 G122P47Y Populus cambium cDNA librar... 153 3e-037
gb|BI131388.1|BI131388 G120P19Y Populus cambium cDNA librar... 149 4e-036
gb|CK103506.1|CK103506 G120P78.5pR Populus tension wood cDN... 149 4e-036
gb|BI131418.1|BI131418 G120P61Y Populus cambium cDNA librar... 149 8e-036
gb|CA933712.1|CA933712 MTU3TS.P11.D09 Aspen stem cDNA Libra... 149 8e-036
gb|CF233496.1|CF233496 PtaJXO0024C6C0606 Poplar cDNA librar... 148 1e-035
gb|BI129484.1|BI129484 G091P27Y Populus cambium cDNA librar... 136 4e-032
gb|CF235263.1|CF235263 PtaJXT0020F9F0911 Poplar cDNA librar... 124 5e-032
gb|BI127551.1|BI127551 G062P23Y Populus cambium cDNA librar... 132 9e-031
gb|BU821492.1|BU821492 UB23CPH05 Populus tremula cambium cD... 131 1e-030
gb|BI130019.1|BI130019 G099P09Y Populus cambium cDNA librar... 121 9e-029
gb|BP928698.1|BP928698 BP928698 full-length enriched poplar... 124 1e-028
gb|BI128110.1|BI128110 G070P93Y Populus cambium cDNA librar... 123 3e-028
gb|CN522671.1|CN522671 GQ0124.B3_M16 GQ012 Populus trichoca... 117 3e-026
gb|BI127798.1|BI127798 G066P14Y Populus cambium cDNA librar... 115 8e-026
gb|BU820099.1|BU820099 UA51CPC06 Populus tremula cambium cD... 115 1e-025
gb|BP928788.1|BP928788 BP928788 full-length enriched poplar... 106 1e-024
gb|BI128475.1|BI128475 G076P35Y Populus cambium cDNA librar... 110 3e-024
gb|CF118999.1|CF118999 MTU10CS.P12.B11 Aspen stem cDNA Libr... 107 3e-023
gb|BI132253.1|BI132253 G134P04Y Populus cambium cDNA librar... 105 1e-022
gb|CF118943.1|CF118943 MTU10CS.P11.D12 Aspen stem cDNA Libr... 103 4e-022
gb|CK319038.1|CK319038 X9P06b12 Populus stem seasonal libra... 100 3e-021
>gb|AY341026.1| Populus tremuloides sucrose synthase mRNA, complete cds
Length = 2792
Score = 182 bits (393), Expect = 7e-046
Identities = 72/101 (71%), Positives = 85/101 (84%)
Frame = +1 / +3
Query: 16 GTEHTDIIRXPFRNENGILRXXISXXDXWPYLETYTEDVSXXIMKEMXAKPDLIIGNYSD 195
G+EH DI+R PFR+E G++R IS + WPYLETYTEDV+ I KE+ KPDLIIGNYSD
Sbjct: 1191 GSEHCDILRVPFRDEKGMVRKRISRFEVWPYLETYTEDVAAEIAKELQGKPDLIIGNYSD 1370
Query: 196 GNLVATLLAHKLGVTQCTIAHALEKTKYPNSDIYLDKFDSQ 318
GN+VA+LLAHKLGVT+CTIAHALEKTKYP+SDIY KFD +
Sbjct: 1371 GNVVASLLAHKLGVTECTIAHALEKTKYPDSDIYWKKFDEK 1493
Score = 99.7 bits (212), Expect = 4e-021
Identities = 51/99 (51%), Positives = 58/99 (58%)
Frame = -3 / -2
Query: 311 SNLSKYMSELGYLVFSKA*AMVH*VTPNLCASRVATRLPSL*LPMIRSGLAXISFIIXXE 132
SN + +SE GY VFS+A A+VH VTPNLCAS+ AT PSL* PMIRSG S I
Sbjct: 1486 SNFFQ*ISESGYFVFSRACAIVHSVTPNLCASKEATTFPSL*FPMIRSGFPCNSLAISAA 1307
Query: 131 TXXXXXXXXXXXSXXEIXXRRMPFSFLKGXRMMSVCSVP 15
T S EI R +PFS LKG R +S CS P
Sbjct: 1306 TSSV*VSRYGQTSKREILFRTIPFSSLKGTRRISQCSDP 1190
>gb|BI131617.1|BI131617 G123P33Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 422
Score = 181 bits (392), Expect = 1e-045
Identities = 72/101 (71%), Positives = 85/101 (84%)
Frame = +1 / +3
Query: 16 GTEHTDIIRXPFRNENGILRXXISXXDXWPYLETYTEDVSXXIMKEMXAKPDLIIGNYSD 195
G+EH DI+R PFR+E G++R IS + WPYLETYTEDV+ I KE+ KPDLIIGNYSD
Sbjct: 30 GSEHCDILRVPFRDEKGMVRKWISRFEVWPYLETYTEDVAAEIAKELQGKPDLIIGNYSD 209
Query: 196 GNLVATLLAHKLGVTQCTIAHALEKTKYPNSDIYLDKFDSQ 318
GN+VA+LLAHKLGVT+CTIAHALEKTKYP+SDIY KFD +
Sbjct: 210 GNVVASLLAHKLGVTECTIAHALEKTKYPDSDIYWKKFDEK 332
Score = 99.7 bits (212), Expect = 4e-021
Identities = 51/99 (51%), Positives = 58/99 (58%)
Frame = -3 / -2
Query: 311 SNLSKYMSELGYLVFSKA*AMVH*VTPNLCASRVATRLPSL*LPMIRSGLAXISFIIXXE 132
SN + +SE GY VFS+A A+VH VTPNLCAS+ AT PSL* PMIRSG S I
Sbjct: 325 SNFFQ*ISESGYFVFSRACAIVHSVTPNLCASKEATTFPSL*FPMIRSGFPCNSLAISAA 146
Query: 131 TXXXXXXXXXXXSXXEIXXRRMPFSFLKGXRMMSVCSVP 15
T S EI R +PFS LKG R +S CS P
Sbjct: 145 TSSV*VSRYGQTSKREIHFRTIPFSSLKGTRRISQCSDP 29
>gb|BI131633.1|BI131633 G123P53Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 490
Score = 181 bits (392), Expect = 1e-045
Identities = 72/101 (71%), Positives = 85/101 (84%)
Frame = +1 / +2
Query: 16 GTEHTDIIRXPFRNENGILRXXISXXDXWPYLETYTEDVSXXIMKEMXAKPDLIIGNYSD 195
G+EH DI+R PFR+E G++R IS + WPYLETYTEDV+ I KE+ KPDLIIGNYSD
Sbjct: 119 GSEHCDILRVPFRDEKGMVRKWISRFEVWPYLETYTEDVAAEIAKELQGKPDLIIGNYSD 298
Query: 196 GNLVATLLAHKLGVTQCTIAHALEKTKYPNSDIYLDKFDSQ 318
GN+VA+LLAHKLGVT+CTIAHALEKTKYP+SDIY KFD +
Sbjct: 299 GNVVASLLAHKLGVTECTIAHALEKTKYPDSDIYWKKFDEK 421
Score = 99.7 bits (212), Expect = 4e-021
Identities = 51/99 (51%), Positives = 58/99 (58%)
Frame = -3 / -2
Query: 311 SNLSKYMSELGYLVFSKA*AMVH*VTPNLCASRVATRLPSL*LPMIRSGLAXISFIIXXE 132
SN + +SE GY VFS+A A+VH VTPNLCAS+ AT PSL* PMIRSG S I
Sbjct: 414 SNFFQ*ISESGYFVFSRACAIVHSVTPNLCASKEATTFPSL*FPMIRSGFPCNSLAISAA 235
Query: 131 TXXXXXXXXXXXSXXEIXXRRMPFSFLKGXRMMSVCSVP 15
T S EI R +PFS LKG R +S CS P
Sbjct: 234 TSSV*VSRYGQTSKREIHFRTIPFSSLKGTRRISQCSDP 118
>gb|CF234998.1|CF234998 PtaJXT0017F5F0511 Poplar cDNA library from young tension xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 760
Score = 181 bits (392), Expect = 1e-045
Identities = 72/101 (71%), Positives = 85/101 (84%)
Frame = +1 / +2
Query: 16 GTEHTDIIRXPFRNENGILRXXISXXDXWPYLETYTEDVSXXIMKEMXAKPDLIIGNYSD 195
G+EH DI+R PFR+E G++R IS + WPYLETYTEDV+ I KE+ KPDLIIGNYSD
Sbjct: 32 GSEHCDILRVPFRDEKGMVRKWISRFEVWPYLETYTEDVAAEIAKELQGKPDLIIGNYSD 211
Query: 196 GNLVATLLAHKLGVTQCTIAHALEKTKYPNSDIYLDKFDSQ 318
GN+VA+LLAHKLGVT+CTIAHALEKTKYP+SDIY KFD +
Sbjct: 212 GNVVASLLAHKLGVTECTIAHALEKTKYPDSDIYWKKFDEK 334
Score = 99.7 bits (212), Expect = 4e-021
Identities = 51/99 (51%), Positives = 58/99 (58%)
Frame = -3 / -2
Query: 311 SNLSKYMSELGYLVFSKA*AMVH*VTPNLCASRVATRLPSL*LPMIRSGLAXISFIIXXE 132
SN + +SE GY VFS+A A+VH VTPNLCAS+ AT PSL* PMIRSG S I
Sbjct: 327 SNFFQ*ISESGYFVFSRACAIVHSVTPNLCASKEATTFPSL*FPMIRSGFPCNSLAISAA 148
Query: 131 TXXXXXXXXXXXSXXEIXXRRMPFSFLKGXRMMSVCSVP 15
T S EI R +PFS LKG R +S CS P
Sbjct: 147 TSSV*VSRYGQTSKREIHFRTIPFSSLKGTRRISQCSDP 31
>gb|CN519255.1|CN519255 GQ0104.B3_D16 GQ010 Populus trichocarpa x Populus deltoides cDNA
clone GQ0104_D16 5', mRNA sequence
Length = 735
Score = 178 bits (385), Expect = 9e-045
Identities = 71/99 (71%), Positives = 83/99 (83%)
Frame = +1 / +3
Query: 22 EHTDIIRXPFRNENGILRXXISXXDXWPYLETYTEDVSXXIMKEMXAKPDLIIGNYSDGN 201
EH DI+R PFR+E G++R IS + WPYLETYTEDV+ I KE+ KPDLIIGNYSDGN
Sbjct: 21 EHCDILRVPFRDEKGMVRKWISRFEVWPYLETYTEDVAAEIAKELQGKPDLIIGNYSDGN 200
Query: 202 LVATLLAHKLGVTQCTIAHALEKTKYPNSDIYLDKFDSQ 318
+VA+LLAHKLGVT+CTIAHALEKTKYP+SDIY KFD +
Sbjct: 201 VVASLLAHKLGVTECTIAHALEKTKYPDSDIYWKKFDEK 317
>gb|CF235850.1|CF235850 PtaJXT0027G3G0313 Poplar cDNA library from young tension xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 714
Score = 177 bits (382), Expect = 2e-044
Identities = 70/101 (69%), Positives = 84/101 (83%)
Frame = +1 / +1
Query: 16 GTEHTDIIRXPFRNENGILRXXISXXDXWPYLETYTEDVSXXIMKEMXAKPDLIIGNYSD 195
G+EH DI+R PFR+ G++R IS + WPYLET+TEDV+ I KE+ KPDLIIGNYSD
Sbjct: 124 GSEHCDILRVPFRDGKGMVRKWISRFEVWPYLETFTEDVAAEIAKELQGKPDLIIGNYSD 303
Query: 196 GNLVATLLAHKLGVTQCTIAHALEKTKYPNSDIYLDKFDSQ 318
GN+VA+LLAHKLGVT+CTIAHALEKTKYP+SDIY KFD +
Sbjct: 304 GNIVASLLAHKLGVTECTIAHALEKTKYPDSDIYWKKFDEK 426
Score = 106 bits (226), Expect = 5e-023
Identities = 52/99 (52%), Positives = 59/99 (59%)
Frame = -3 / -2
Query: 311 SNLSKYMSELGYLVFSKA*AMVH*VTPNLCASRVATRLPSL*LPMIRSGLAXISFIIXXE 132
SN +Y+SE GY VFS+A AMVH VTPNLCA++ AT PSL* PMIRSGL S I
Sbjct: 419 SNFFQYISESGYFVFSRACAMVHSVTPNLCANKEATMFPSL*FPMIRSGLPCNSLAISAA 240
Query: 131 TXXXXXXXXXXXSXXEIXXRRMPFSFLKGXRMMSVCSVP 15
T S EI R +PF LKG R +S CS P
Sbjct: 239 TSSVKVSRYGHTSKREIHLRTIPFPSLKGTRRISQCSDP 123
>gb|CK320848.1|CK320848 X9SP07c09 Populus stem seasonal library Populus deltoides cDNA,
mRNA sequence
Length = 653
Score = 172 bits (372), Expect = 5e-043
Identities = 69/94 (73%), Positives = 80/94 (85%)
Frame = +1 / +1
Query: 31 DIIRXPFRNENGILRXXISXXDXWPYLETYTEDVSXXIMKEMXAKPDLIIGNYSDGNLVA 210
DI+R PFR+E G++R IS + WPYLETYTEDV+ I KE+ KPDLIIGNYSDGN+VA
Sbjct: 4 DILRVPFRDEKGMVRKWISRFEVWPYLETYTEDVAAEIAKELQGKPDLIIGNYSDGNVVA 183
Query: 211 TLLAHKLGVTQCTIAHALEKTKYPNSDIYLDKFD 312
+LLAHKLGVT+CTIAHALEKTKYP+SDIY KFD
Sbjct: 184 SLLAHKLGVTECTIAHALEKTKYPDSDIYWKKFD 285
>gb|BI128740.1|BI128740 G080P72Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 512
Score = 171 bits (369), Expect = 1e-042
Identities = 68/97 (70%), Positives = 81/97 (83%)
Frame = +1 / +2
Query: 16 GTEHTDIIRXPFRNENGILRXXISXXDXWPYLETYTEDVSXXIMKEMXAKPDLIIGNYSD 195
G+EH DI+R PFR+ G++R IS + WPYLET+TEDV+ I KE+ KPDLIIGNYSD
Sbjct: 149 GSEHCDILRVPFRDGKGMVRKWISRFEVWPYLETFTEDVAAEIAKELQGKPDLIIGNYSD 328
Query: 196 GNLVATLLAHKLGVTQCTIAHALEKTKYPNSDIYLDK 306
GN+VA+LLAHKLGVT+CTIAHALEKTKYP+SDIY K
Sbjct: 329 GNIVASLLAHKLGVTECTIAHALEKTKYPDSDIYWKK 439
Score = 102 bits (218), Expect = 6e-022
Identities = 50/95 (52%), Positives = 57/95 (60%)
Frame = -3 / -3
Query: 299 KYMSELGYLVFSKA*AMVH*VTPNLCASRVATRLPSL*LPMIRSGLAXISFIIXXETXXX 120
+Y+SE GY VFS+A AMVH VTPNLCA++ AT PSL* PMIRSGL S I T
Sbjct: 432 QYISESGYFVFSRACAMVHSVTPNLCANKEATMFPSL*FPMIRSGLPCNSLAISAATSSV 253
Query: 119 XXXXXXXXSXXEIXXRRMPFSFLKGXRMMSVCSVP 15
S EI R +PF LKG R +S CS P
Sbjct: 252 KVSRYGHTSKREIHLRTIPFPSLKGTRRISQCSDP 148
>gb|BI131657.1|BI131657 G123P87Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 462
Score = 169 bits (364), Expect = 7e-042
Identities = 67/93 (72%), Positives = 80/93 (86%)
Frame = +1 / +2
Query: 16 GTEHTDIIRXPFRNENGILRXXISXXDXWPYLETYTEDVSXXIMKEMXAKPDLIIGNYSD 195
G+EH DI+R PFR+ G++R IS + WPYLET+TEDV+ I KE+ AKPDLIIGNYSD
Sbjct: 182 GSEHCDILRVPFRDGKGMVRKWISRFEVWPYLETFTEDVAAEIAKELQAKPDLIIGNYSD 361
Query: 196 GNLVATLLAHKLGVTQCTIAHALEKTKYPNSDI 294
GN+VA+LLAHKLGVT+CTIAHALEKTKYP+SDI
Sbjct: 362 GNIVASLLAHKLGVTECTIAHALEKTKYPDSDI 460
Score = 104 bits (222), Expect = 2e-022
Identities = 51/94 (54%), Positives = 57/94 (60%)
Frame = -3 / -1
Query: 296 YMSELGYLVFSKA*AMVH*VTPNLCASRVATRLPSL*LPMIRSGLAXISFIIXXETXXXX 117
Y+SE GY VFS+A AMVH VTPNLCA++ AT PSL* PMIRSGLA S I T
Sbjct: 462 YISESGYFVFSRACAMVHSVTPNLCANKEATMFPSL*FPMIRSGLACNSLAISAATSSVK 283
Query: 116 XXXXXXXSXXEIXXRRMPFSFLKGXRMMSVCSVP 15
S EI R +PF LKG R +S CS P
Sbjct: 282 VSRYGHTSKREIHLRTIPFPSLKGTRRISQCSDP 181
>gb|CN517737.1|CN517737 GQ0094.B3_L08 GQ009 Populus trichocarpa x Populus deltoides cDNA
clone GQ0094_L08 5', mRNA sequence
Length = 487
Score = 165 bits (355), Expect = 1e-040
Identities = 66/98 (67%), Positives = 77/98 (78%)
Frame = +1 / +3
Query: 16 GTEHTDIIRXPFRNENGILRXXISXXDXWPYLETYTEDVSXXIMKEMXAKPDLIIGNYSD 195
G+EH DI+R PFR+E G++R IS + WPYLETYTEDV+ I KE+ KPDLIIGNYSD
Sbjct: 177 GSEHCDILRVPFRDEKGMVRKWISRFEVWPYLETYTEDVAAEIAKELQGKPDLIIGNYSD 356
Query: 196 GNLVATLLAHKLGVTQCTIAHALEKTKYPNSDIYLDKF 309
GN+VA+LLAHKL VT+CTIAHAL KYP DIY KF
Sbjct: 357 GNVVASLLAHKLXVTECTIAHALXXXKYPXXDIYWKKF 470
>gb|CN550192.1|CN550192 GQ0242.B3_D19 GQ024 Populus trichocarpa x Populus deltoides cDNA
clone GQ0242_D19 5', mRNA sequence
Length = 662
Score = 162 bits (350), Expect = 6e-040
Identities = 66/94 (70%), Positives = 77/94 (81%)
Frame = +1 / +3
Query: 16 GTEHTDIIRXPFRNENGILRXXISXXDXWPYLETYTEDVSXXIMKEMXAKPDLIIGNYSD 195
G+EH DI+R PF E G++R IS + WPYL TYTEDV+ I KE+ KPDLII NYSD
Sbjct: 345 GSEHCDILRVPFXXEKGMVRKWISRFEVWPYLXTYTEDVAAEIAKELXXKPDLIIXNYSD 524
Query: 196 GNLVATLLAHKLGVTQCTIAHALEKTKYPNSDIY 297
GN+VA+LLAHKLGVT+CTIAHAL KTKYP+SDIY
Sbjct: 525 GNVVASLLAHKLGVTECTIAHALXKTKYPDSDIY 626
>gb|BI129619.1|BI129619 G093P35Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 359
Score = 162 bits (349), Expect = 8e-040
Identities = 64/89 (71%), Positives = 75/89 (84%)
Frame = +1 / +3
Query: 16 GTEHTDIIRXPFRNENGILRXXISXXDXWPYLETYTEDVSXXIMKEMXAKPDLIIGNYSD 195
G+EH DI+R PFR+E G++R S + WPYLETYTEDV+ I KE+ KPDLIIGNYSD
Sbjct: 93 GSEHCDILRVPFRDEKGMVRKWSSRFEVWPYLETYTEDVAAEIAKELQGKPDLIIGNYSD 272
Query: 196 GNLVATLLAHKLGVTQCTIAHALEKTKYP 282
GN+VA+LLAHKLGVT+CTIAHALEKTKYP
Sbjct: 273 GNVVASLLAHKLGVTECTIAHALEKTKYP 359
>gb|CF120071.1|CF120071 MTU10CS.P9.H09 Aspen stem cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 624
Score = 161 bits (348), Expect = 1e-039
Identities = 64/88 (72%), Positives = 75/88 (85%)
Frame = +1 / -3
Query: 16 GTEHTDIIRXPFRNENGILRXXISXXDXWPYLETYTEDVSXXIMKEMXAKPDLIIGNYSD 195
G+EH DI+R PFR+E G++R IS + WPYLETYTEDV+ I KE+ KPDLIIGNYSD
Sbjct: 286 GSEHCDILRVPFRDEKGMVRKWISRFEVWPYLETYTEDVAAEIAKELQGKPDLIIGNYSD 107
Query: 196 GNLVATLLAHKLGVTQCTIAHALEKTKY 279
GN+VA+LLAHKLGVT+CTIAHALEKTKY
Sbjct: 106 GNVVASLLAHKLGVTECTIAHALEKTKY 23
>gb|AJ771680.1|AJ771680 AJ771680 Populus euphratica root 3-6 months Populus euphratica cDNA
clone P0001600004C01F1, mRNA sequence
Length = 356
Score = 156 bits (337), Expect = 3e-038
Identities = 63/91 (69%), Positives = 74/91 (81%)
Frame = +1 / +2
Query: 46 PFRNENGILRXXISXXDXWPYLETYTEDVSXXIMKEMXAKPDLIIGNYSDGNLVATLLAH 225
PFR+E+GILR IS D WPYLET+ ED + I+ E+ PD IIGNYSDGNLVA+LLA+
Sbjct: 2 PFRSEHGILRKWISRFDVWPYLETFAEDAASEIVAELQGIPDFIIGNYSDGNLVASLLAY 181
Query: 226 KLGVTQCTIAHALEKTKYPNSDIYLDKFDSQ 318
K+GVTQCTIAHALEKTKYP+SDIY KFD +
Sbjct: 182 KMGVTQCTIAHALEKTKYPDSDIYWKKFDDK 274
>gb|AJ772013.1|AJ772013 AJ772013 Populus euphratica root 3-6 months Populus euphratica cDNA
clone P0001600013G04F1, mRNA sequence
Length = 331
Score = 156 bits (337), Expect = 3e-038
Identities = 63/91 (69%), Positives = 74/91 (81%)
Frame = +1 / +2
Query: 46 PFRNENGILRXXISXXDXWPYLETYTEDVSXXIMKEMXAKPDLIIGNYSDGNLVATLLAH 225
PFR+E+GILR IS D WPYLET+ ED + I+ E+ PD IIGNYSDGNLVA+LLA+
Sbjct: 2 PFRSEHGILRKWISRFDVWPYLETFAEDAASEIVAELQGIPDFIIGNYSDGNLVASLLAY 181
Query: 226 KLGVTQCTIAHALEKTKYPNSDIYLDKFDSQ 318
K+GVTQCTIAHALEKTKYP+SDIY KFD +
Sbjct: 182 KMGVTQCTIAHALEKTKYPDSDIYWKKFDDK 274
>gb|AJ780505.1|AJ780505 AJ780505 Populus euphratica leaf 3-6 months Populus euphratica cDNA
clone P0000900009A04F1, mRNA sequence
Length = 343
Score = 156 bits (337), Expect = 3e-038
Identities = 63/91 (69%), Positives = 74/91 (81%)
Frame = +1 / +2
Query: 46 PFRNENGILRXXISXXDXWPYLETYTEDVSXXIMKEMXAKPDLIIGNYSDGNLVATLLAH 225
PFR+E+GILR IS D WPYLET+ ED + I+ E+ PD IIGNYSDGNLVA+LLA+
Sbjct: 2 PFRSEHGILRKWISRFDVWPYLETFAEDAASEIVAELQGIPDFIIGNYSDGNLVASLLAY 181
Query: 226 KLGVTQCTIAHALEKTKYPNSDIYLDKFDSQ 318
K+GVTQCTIAHALEKTKYP+SDIY KFD +
Sbjct: 182 KMGVTQCTIAHALEKTKYPDSDIYWKKFDDK 274
>gb|CA932243.1|CA932243 MTU5CS.P10.E03 Aspen stem cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 754
Score = 156 bits (336), Expect = 5e-038
Identities = 62/86 (72%), Positives = 73/86 (84%)
Frame = +1 / -3
Query: 16 GTEHTDIIRXPFRNENGILRXXISXXDXWPYLETYTEDVSXXIMKEMXAKPDLIIGNYSD 195
G+EH DI+R PFR+E G++R IS + WPYLETYTEDV+ I KE+ KPDLIIGNYSD
Sbjct: 260 GSEHCDILRVPFRDEKGMVRKWISRFEVWPYLETYTEDVAAEIAKELQGKPDLIIGNYSD 81
Query: 196 GNLVATLLAHKLGVTQCTIAHALEKT 273
GN+VA+LLAHKLGVT+CTIAHALEKT
Sbjct: 80 GNVVASLLAHKLGVTECTIAHALEKT 3
>gb|CA932252.1|CA932252 MTU5CS.P10.F03 Aspen stem cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 655
Score = 156 bits (336), Expect = 5e-038
Identities = 62/86 (72%), Positives = 73/86 (84%)
Frame = +1 / -3
Query: 16 GTEHTDIIRXPFRNENGILRXXISXXDXWPYLETYTEDVSXXIMKEMXAKPDLIIGNYSD 195
G+EH DI+R PFR+E G++R IS + WPYLETYTEDV+ I KE+ KPDLIIGNYSD
Sbjct: 260 GSEHCDILRVPFRDEKGMVRKWISRFEVWPYLETYTEDVAAEIAKELQGKPDLIIGNYSD 81
Query: 196 GNLVATLLAHKLGVTQCTIAHALEKT 273
GN+VA+LLAHKLGVT+CTIAHALEKT
Sbjct: 80 GNVVASLLAHKLGVTECTIAHALEKT 3
>gb|CA932744.1|CA932744 MTU5CS.P16.H05 Aspen stem cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 695
Score = 156 bits (336), Expect = 5e-038
Identities = 62/86 (72%), Positives = 73/86 (84%)
Frame = +1 / -1
Query: 16 GTEHTDIIRXPFRNENGILRXXISXXDXWPYLETYTEDVSXXIMKEMXAKPDLIIGNYSD 195
G+EH DI+R PFR+E G++R IS + WPYLETYTEDV+ I KE+ KPDLIIGNYSD
Sbjct: 260 GSEHCDILRVPFRDEKGMVRKWISRFEVWPYLETYTEDVAAEIAKELQGKPDLIIGNYSD 81
Query: 196 GNLVATLLAHKLGVTQCTIAHALEKT 273
GN+VA+LLAHKLGVT+CTIAHALEKT
Sbjct: 80 GNVVASLLAHKLGVTECTIAHALEKT 3
>gb|CA932813.1|CA932813 MTU5CS.P17.G08 Aspen stem cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 690
Score = 156 bits (336), Expect = 5e-038
Identities = 62/86 (72%), Positives = 73/86 (84%)
Frame = +1 / -2
Query: 16 GTEHTDIIRXPFRNENGILRXXISXXDXWPYLETYTEDVSXXIMKEMXAKPDLIIGNYSD 195
G+EH DI+R PFR+E G++R IS + WPYLETYTEDV+ I KE+ KPDLIIGNYSD
Sbjct: 260 GSEHCDILRVPFRDEKGMVRKWISRFEVWPYLETYTEDVAAEIAKELQGKPDLIIGNYSD 81
Query: 196 GNLVATLLAHKLGVTQCTIAHALEKT 273
GN+VA+LLAHKLGVT+CTIAHALEKT
Sbjct: 80 GNVVASLLAHKLGVTECTIAHALEKT 3
>gb|CA932828.1|CA932828 MTU5CS.P18.A04 Aspen stem cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 694
Score = 156 bits (336), Expect = 5e-038
Identities = 62/86 (72%), Positives = 73/86 (84%)
Frame = +1 / -3
Query: 16 GTEHTDIIRXPFRNENGILRXXISXXDXWPYLETYTEDVSXXIMKEMXAKPDLIIGNYSD 195
G+EH DI+R PFR+E G++R IS + WPYLETYTEDV+ I KE+ KPDLIIGNYSD
Sbjct: 260 GSEHCDILRVPFRDEKGMVRKWISRFEVWPYLETYTEDVAAEIAKELQGKPDLIIGNYSD 81
Query: 196 GNLVATLLAHKLGVTQCTIAHALEKT 273
GN+VA+LLAHKLGVT+CTIAHALEKT
Sbjct: 80 GNVVASLLAHKLGVTECTIAHALEKT 3
>gb|CA932877.1|CA932877 MTU5CS.P18.F07 Aspen stem cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 688
Score = 156 bits (336), Expect = 5e-038
Identities = 62/86 (72%), Positives = 73/86 (84%)
Frame = +1 / -3
Query: 16 GTEHTDIIRXPFRNENGILRXXISXXDXWPYLETYTEDVSXXIMKEMXAKPDLIIGNYSD 195
G+EH DI+R PFR+E G++R IS + WPYLETYTEDV+ I KE+ KPDLIIGNYSD
Sbjct: 260 GSEHCDILRVPFRDEKGMVRKWISRFEVWPYLETYTEDVAAEIAKELQGKPDLIIGNYSD 81
Query: 196 GNLVATLLAHKLGVTQCTIAHALEKT 273
GN+VA+LLAHKLGVT+CTIAHALEKT
Sbjct: 80 GNVVASLLAHKLGVTECTIAHALEKT 3
>gb|CA932895.1|CA932895 MTU5CS.P18.H07 Aspen stem cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 689
Score = 156 bits (336), Expect = 5e-038
Identities = 62/86 (72%), Positives = 73/86 (84%)
Frame = +1 / -1
Query: 16 GTEHTDIIRXPFRNENGILRXXISXXDXWPYLETYTEDVSXXIMKEMXAKPDLIIGNYSD 195
G+EH DI+R PFR+E G++R IS + WPYLETYTEDV+ I KE+ KPDLIIGNYSD
Sbjct: 260 GSEHCDILRVPFRDEKGMVRKWISRFEVWPYLETYTEDVAAEIAKELQGKPDLIIGNYSD 81
Query: 196 GNLVATLLAHKLGVTQCTIAHALEKT 273
GN+VA+LLAHKLGVT+CTIAHALEKT
Sbjct: 80 GNVVASLLAHKLGVTECTIAHALEKT 3
>gb|CA932974.1|CA932974 MTU5CS.P1.H02 Aspen stem cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 599
Score = 156 bits (336), Expect = 5e-038
Identities = 62/86 (72%), Positives = 73/86 (84%)
Frame = +1 / -1
Query: 16 GTEHTDIIRXPFRNENGILRXXISXXDXWPYLETYTEDVSXXIMKEMXAKPDLIIGNYSD 195
G+EH DI+R PFR+E G++R IS + WPYLETYTEDV+ I KE+ KPDLIIGNYSD
Sbjct: 260 GSEHCDILRVPFRDEKGMVRKWISRFEVWPYLETYTEDVAAEIAKELQGKPDLIIGNYSD 81
Query: 196 GNLVATLLAHKLGVTQCTIAHALEKT 273
GN+VA+LLAHKLGVT+CTIAHALEKT
Sbjct: 80 GNVVASLLAHKLGVTECTIAHALEKT 3
>gb|CA933144.1|CA933144 MTU5CS.P4.A08 Aspen stem cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 391
Score = 156 bits (336), Expect = 5e-038
Identities = 62/86 (72%), Positives = 73/86 (84%)
Frame = +1 / -3
Query: 16 GTEHTDIIRXPFRNENGILRXXISXXDXWPYLETYTEDVSXXIMKEMXAKPDLIIGNYSD 195
G+EH DI+R PFR+E G++R IS + WPYLETYTEDV+ I KE+ KPDLIIGNYSD
Sbjct: 260 GSEHCDILRVPFRDEKGMVRKWISRFEVWPYLETYTEDVAAEIAKELQGKPDLIIGNYSD 81
Query: 196 GNLVATLLAHKLGVTQCTIAHALEKT 273
GN+VA+LLAHKLGVT+CTIAHALEKT
Sbjct: 80 GNVVASLLAHKLGVTECTIAHALEKT 3
>gb|CA933178.1|CA933178 MTU5CS.P4.E02 Aspen stem cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 688
Score = 156 bits (336), Expect = 5e-038
Identities = 62/86 (72%), Positives = 73/86 (84%)
Frame = +1 / -3
Query: 16 GTEHTDIIRXPFRNENGILRXXISXXDXWPYLETYTEDVSXXIMKEMXAKPDLIIGNYSD 195
G+EH DI+R PFR+E G++R IS + WPYLETYTEDV+ I KE+ KPDLIIGNYSD
Sbjct: 260 GSEHCDILRVPFRDEKGMVRKWISRFEVWPYLETYTEDVAAEIAKELQGKPDLIIGNYSD 81
Query: 196 GNLVATLLAHKLGVTQCTIAHALEKT 273
GN+VA+LLAHKLGVT+CTIAHALEKT
Sbjct: 80 GNVVASLLAHKLGVTECTIAHALEKT 3
>gb|CA933427.1|CA933427 MTU5CS.P7.H09 Aspen stem cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 755
Score = 156 bits (336), Expect = 5e-038
Identities = 62/86 (72%), Positives = 73/86 (84%)
Frame = +1 / -1
Query: 16 GTEHTDIIRXPFRNENGILRXXISXXDXWPYLETYTEDVSXXIMKEMXAKPDLIIGNYSD 195
G+EH DI+R PFR+E G++R IS + WPYLETYTEDV+ I KE+ KPDLIIGNYSD
Sbjct: 260 GSEHCDILRVPFRDEKGMVRKWISRFEVWPYLETYTEDVAAEIAKELQGKPDLIIGNYSD 81
Query: 196 GNLVATLLAHKLGVTQCTIAHALEKT 273
GN+VA+LLAHKLGVT+CTIAHALEKT
Sbjct: 80 GNVVASLLAHKLGVTECTIAHALEKT 3
>gb|CF119276.1|CF119276 MTU10CS.P15.G02 Aspen stem cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 798
Score = 156 bits (336), Expect = 5e-038
Identities = 62/86 (72%), Positives = 73/86 (84%)
Frame = +1 / -2
Query: 16 GTEHTDIIRXPFRNENGILRXXISXXDXWPYLETYTEDVSXXIMKEMXAKPDLIIGNYSD 195
G+EH DI+R PFR+E G++R IS + WPYLETYTEDV+ I KE+ KPDLIIGNYSD
Sbjct: 260 GSEHCDILRVPFRDEKGMVRKWISRFEVWPYLETYTEDVAAEIAKELQGKPDLIIGNYSD 81
Query: 196 GNLVATLLAHKLGVTQCTIAHALEKT 273
GN+VA+LLAHKLGVT+CTIAHALEKT
Sbjct: 80 GNVVASLLAHKLGVTECTIAHALEKT 3
>gb|CF119592.1|CF119592 MTU10CS.P3.H02 Aspen stem cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 584
Score = 156 bits (336), Expect = 5e-038
Identities = 62/86 (72%), Positives = 73/86 (84%)
Frame = +1 / -1
Query: 16 GTEHTDIIRXPFRNENGILRXXISXXDXWPYLETYTEDVSXXIMKEMXAKPDLIIGNYSD 195
G+EH DI+R PFR+E G++R IS + WPYLETYTEDV+ I KE+ KPDLIIGNYSD
Sbjct: 260 GSEHCDILRVPFRDEKGMVRKWISRFEVWPYLETYTEDVAAEIAKELQGKPDLIIGNYSD 81
Query: 196 GNLVATLLAHKLGVTQCTIAHALEKT 273
GN+VA+LLAHKLGVT+CTIAHALEKT
Sbjct: 80 GNVVASLLAHKLGVTECTIAHALEKT 3
>gb|CF119738.1|CF119738 MTU10CS.P5.G02 Aspen stem cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 620
Score = 156 bits (336), Expect = 5e-038
Identities = 62/86 (72%), Positives = 73/86 (84%)
Frame = +1 / -1
Query: 16 GTEHTDIIRXPFRNENGILRXXISXXDXWPYLETYTEDVSXXIMKEMXAKPDLIIGNYSD 195
G+EH DI+R PFR+E G++R IS + WPYLETYTEDV+ I KE+ KPDLIIGNYSD
Sbjct: 260 GSEHCDILRVPFRDEKGMVRKWISRFEVWPYLETYTEDVAAEIAKELQGKPDLIIGNYSD 81
Query: 196 GNLVATLLAHKLGVTQCTIAHALEKT 273
GN+VA+LLAHKLGVT+CTIAHALEKT
Sbjct: 80 GNVVASLLAHKLGVTECTIAHALEKT 3
>gb|BI131553.1|BI131553 G122P47Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 462
Score = 153 bits (330), Expect = 3e-037
Identities = 61/85 (71%), Positives = 72/85 (84%)
Frame = +1 / +1
Query: 64 GILRXXISXXDXWPYLETYTEDVSXXIMKEMXAKPDLIIGNYSDGNLVATLLAHKLGVTQ 243
G++R IS + WPYLET+TEDV+ I KE+ KPDLIIGNYSDGN+VA+LLAHKLGVT+
Sbjct: 7 GMVRKWISRFEVWPYLETFTEDVAAEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTE 186
Query: 244 CTIAHALEKTKYPNSDIYLDKFDSQ 318
CTIAHALEKTKYP+SDIY KFD +
Sbjct: 187 CTIAHALEKTKYPDSDIYWKKFDEK 261
>gb|BI131388.1|BI131388 G120P19Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 448
Score = 149 bits (322), Expect = 4e-036
Identities = 60/82 (73%), Positives = 69/82 (84%)
Frame = +1 / +2
Query: 73 RXXISXXDXWPYLETYTEDVSXXIMKEMXAKPDLIIGNYSDGNLVATLLAHKLGVTQCTI 252
R IS + WPYLET+TEDV+ I KE+ KPDLIIGNYSDGN+VA+LLAHKLGVT+CTI
Sbjct: 2 RKWISRFEVWPYLETFTEDVAAEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTECTI 181
Query: 253 AHALEKTKYPNSDIYLDKFDSQ 318
AHALEKTKYP+SDIY KFD +
Sbjct: 182 AHALEKTKYPDSDIYWKKFDEK 247
>gb|CK103506.1|CK103506 G120P78.5pR Populus tension wood cDNA library Populus tremula x
Populus tremuloides cDNA clone G120P78 5', mRNA sequence
Length = 602
Score = 149 bits (322), Expect = 4e-036
Identities = 60/82 (73%), Positives = 69/82 (84%)
Frame = +1 / +3
Query: 73 RXXISXXDXWPYLETYTEDVSXXIMKEMXAKPDLIIGNYSDGNLVATLLAHKLGVTQCTI 252
R IS + WPYLET+TEDV+ I KE+ KPDLIIGNYSDGN+VA+LLAHKLGVT+CTI
Sbjct: 9 RKWISRFEVWPYLETFTEDVAAEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTECTI 188
Query: 253 AHALEKTKYPNSDIYLDKFDSQ 318
AHALEKTKYP+SDIY KFD +
Sbjct: 189 AHALEKTKYPDSDIYWKKFDEK 254
>gb|BI131418.1|BI131418 G120P61Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 412
Score = 149 bits (320), Expect = 8e-036
Identities = 59/79 (74%), Positives = 68/79 (86%)
Frame = +1 / +2
Query: 82 ISXXDXWPYLETYTEDVSXXIMKEMXAKPDLIIGNYSDGNLVATLLAHKLGVTQCTIAHA 261
IS + WPYLET+TEDV+ I KE+ KPDLIIGNYSDGN+VA+LLAHKLGVT+CTIAHA
Sbjct: 26 ISRFEVWPYLETFTEDVAAEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTECTIAHA 205
Query: 262 LEKTKYPNSDIYLDKFDSQ 318
LEKTKYP+SDIY KFD +
Sbjct: 206 LEKTKYPDSDIYWKKFDEK 262
>gb|CA933712.1|CA933712 MTU3TS.P11.D09 Aspen stem cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 509
Score = 149 bits (320), Expect = 8e-036
Identities = 60/86 (69%), Positives = 71/86 (82%)
Frame = +1 / -1
Query: 16 GTEHTDIIRXPFRNENGILRXXISXXDXWPYLETYTEDVSXXIMKEMXAKPDLIIGNYSD 195
G+EH DI+R PFR+E G++R IS + WPYLETYTEDV+ I K + KPDLIIGNYSD
Sbjct: 260 GSEHCDILRVPFRDEKGMVRKWISRFEVWPYLETYTEDVAAEIAK*LQGKPDLIIGNYSD 81
Query: 196 GNLVATLLAHKLGVTQCTIAHALEKT 273
GN+VA+L AHKLGVT+CTIAHALEKT
Sbjct: 80 GNVVASLPAHKLGVTECTIAHALEKT 3
>gb|CF233496.1|CF233496 PtaJXO0024C6C0606 Poplar cDNA library from young opposite xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 622
Score = 148 bits (319), Expect = 1e-035
Identities = 60/92 (65%), Positives = 73/92 (79%)
Frame = +1 / +2
Query: 31 DIIRXPFRNENGILRXXISXXDXWPYLETYTEDVSXXIMKEMXAKPDLIIGNYSDGNLVA 210
+I+R PFR+E G++R IS + WPYLETYTEDV+ I KE+ KPDLIIGNYSDGN+VA
Sbjct: 2 NILRVPFRDEKGMVRKWISRFEVWPYLETYTEDVAAEIAKELQGKPDLIIGNYSDGNVVA 181
Query: 211 TLLAHKLGVTQCTIAHALEKTKYPNSDIYLDK 306
+LLAHKLGVT+CTIAHALEK K P L++
Sbjct: 182 SLLAHKLGVTECTIAHALEKNKVPRFRYLLEE 277
>gb|BI129484.1|BI129484 G091P27Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 475
Score = 136 bits (293), Expect = 4e-032
Identities = 55/87 (63%), Positives = 66/87 (75%)
Frame = +1 / +2
Query: 46 PFRNENGILRXXISXXDXWPYLETYTEDVSXXIMKEMXAKPDLIIGNYSDGNLVATLLAH 225
PFR+E G++R IS + WPYLETYTEDV+ I KE+ KPDLIIGNYSDGN+VA+LLAH
Sbjct: 5 PFRDEKGMVRKWISRFEVWPYLETYTEDVAAEIAKELQGKPDLIIGNYSDGNVVASLLAH 184
Query: 226 KLGVTQCTIAHALEKTKYPNSDIYLDK 306
KLGVT+CTIAH K K P L++
Sbjct: 185 KLGVTECTIAHGSRKNKVPRFRYLLEE 265
>gb|CF235263.1|CF235263 PtaJXT0020F9F0911 Poplar cDNA library from young tension xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 772
Score = 124 bits (266), Expect(2) = 5e-032
Identities = 49/61 (80%), Positives = 54/61 (88%)
Frame = +1 / +1
Query: 100 WPYLETYTEDVSXXIMKEMXAKPDLIIGNYSDGNLVATLLAHKLGVTQCTIAHALEKTKY 279
WPYLETYTEDV+ I KE+ KPDLIIGNYSDGN+VA+LLAHKLGVT+CTIAHALEK K
Sbjct: 13 WPYLETYTEDVAAEIAKELQGKPDLIIGNYSDGNVVASLLAHKLGVTECTIAHALEKNKV 192
Query: 280 P 282
P
Sbjct: 193 P 195
Score = 31.2 bits (62), Expect(2) = 5e-032
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +1 / +2
Query: 265 EKTKYPNSDIYLDKFDSQ 318
+KTKYP+SD Y KFD +
Sbjct: 179 KKTKYPDSDXYWKKFDEK 232
>gb|BI127551.1|BI127551 G062P23Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 423
Score = 132 bits (283), Expect = 9e-031
Identities = 52/79 (65%), Positives = 64/79 (81%)
Frame = +1 / +2
Query: 16 GTEHTDIIRXPFRNENGILRXXISXXDXWPYLETYTEDVSXXIMKEMXAKPDLIIGNYSD 195
G+EH DI+R PFR+ G++R IS + WPYLET+TEDV+ I KE+ KPDLIIGNYSD
Sbjct: 185 GSEHCDILRVPFRDGKGMVRKWISRFEVWPYLETFTEDVAAEIAKELQGKPDLIIGNYSD 364
Query: 196 GNLVATLLAHKLGVTQCTI 252
GN+VA+L AHKLGVT+CTI
Sbjct: 365 GNIVASL*AHKLGVTECTI 421
>gb|BU821492.1|BU821492 UB23CPH05 Populus tremula cambium cDNA library Populus tremula cDNA
5 prime, mRNA sequence
Length = 450
Score = 131 bits (282), Expect = 1e-030
Identities = 51/99 (51%), Positives = 73/99 (73%)
Frame = +1 / +1
Query: 16 GTEHTDIIRXPFRNENGILRXXISXXDXWPYLETYTEDVSXXIMKEMXAKPDLIIGNYSD 195
GT+H+ I+R PF+ E G+L +S D +PYLE + +D + +++ M KPDL IGNYSD
Sbjct: 142 GTKHSHIVRVPFKTEKGVLPQWVSRFDVYPYLERFAQDAADKVLEYMDCKPDL*IGNYSD 321
Query: 196 GNLVATLLAHKLGVTQCTIAHALEKTKYPNSDIYLDKFD 312
GNLVA+L+A KLG+T T+AHALE+TKY +SD+ ++ D
Sbjct: 322 GNLVASLMAQKLGITLGTMAHALERTKYDDSDVTWNELD 438
>gb|BI130019.1|BI130019 G099P09Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 435
Score = 121 bits (259), Expect(2) = 9e-029
Identities = 49/74 (66%), Positives = 60/74 (81%)
Frame = +1 / +2
Query: 16 GTEHTDIIRXPFRNENGILRXXISXXDXWPYLETYTEDVSXXIMKEMXAKPDLIIGNYSD 195
G+EH DI+R PFR+E G++R IS + PYLETYTEDV+ I KE+ KPDLI+GNYSD
Sbjct: 191 GSEHCDILRVPFRDEKGMVRKWISRLEVRPYLETYTEDVAAEIAKELQGKPDLIMGNYSD 370
Query: 196 GNLVATLLAHKLGV 237
GN+VA+LLAHKLGV
Sbjct: 371 GNVVASLLAHKLGV 412
Score = 22.5 bits (43), Expect(2) = 9e-029
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = +1 / +1
Query: 214 LLAHKLGVTQCTIAHA 261
L + ++ T+CTIAHA
Sbjct: 388 LASTQIRCTECTIAHA 435
>gb|BP928698.1|BP928698 BP928698 full-length enriched poplar cDNA library Populus nigra
cDNA clone PnFL1-087_F11.f 5', mRNA sequence
Length = 549
Score = 124 bits (267), Expect = 1e-028
Identities = 50/71 (70%), Positives = 59/71 (83%)
Frame = +1 / +2
Query: 106 YLETYTEDVSXXIMKEMXAKPDLIIGNYSDGNLVATLLAHKLGVTQCTIAHALEKTKYPN 285
YLET+ ED + I+ E+ PD IIGNYSDGNLVA+LLA+K+GVTQCTIAHALEKTKYP+
Sbjct: 2 YLETFAEDAASEIVAELQGIPDFIIGNYSDGNLVASLLAYKMGVTQCTIAHALEKTKYPD 181
Query: 286 SDIYLDKFDSQ 318
SDIY KFD +
Sbjct: 182 SDIYWKKFDDK 214
>gb|BI128110.1|BI128110 G070P93Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 538
Score = 123 bits (265), Expect = 3e-028
Identities = 50/65 (76%), Positives = 57/65 (87%)
Frame = +1 / +1
Query: 124 EDVSXXIMKEMXAKPDLIIGNYSDGNLVATLLAHKLGVTQCTIAHALEKTKYPNSDIYLD 303
EDV+ I KE+ KPDLIIGNYSDGN+VA+LLAHKLGVT+CTIAHALEKTKYP+SDIY
Sbjct: 22 EDVAAEIAKELQVKPDLIIGNYSDGNVVASLLAHKLGVTECTIAHALEKTKYPDSDIYWK 201
Query: 304 KFDSQ 318
KFD +
Sbjct: 202 KFDEK 216
>gb|CN522671.1|CN522671 GQ0124.B3_M16 GQ012 Populus trichocarpa x Populus deltoides cDNA
clone GQ0124_M16 5', mRNA sequence
Length = 466
Score = 117 bits (250), Expect = 3e-026
Identities = 47/59 (79%), Positives = 53/59 (89%)
Frame = +1 / +2
Query: 142 IMKEMXAKPDLIIGNYSDGNLVATLLAHKLGVTQCTIAHALEKTKYPNSDIYLDKFDSQ 318
I KE+ KPDLIIGNYSDGN+VA+LLAHKLGVT+CTIAHALEKTKYP+SDIY KFD +
Sbjct: 11 IAKELQGKPDLIIGNYSDGNVVASLLAHKLGVTECTIAHALEKTKYPDSDIYWKKFDEK 187
>gb|BI127798.1|BI127798 G066P14Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 333
Score = 115 bits (247), Expect = 8e-026
Identities = 45/70 (64%), Positives = 56/70 (80%)
Frame = +1 / +2
Query: 16 GTEHTDIIRXPFRNENGILRXXISXXDXWPYLETYTEDVSXXIMKEMXAKPDLIIGNYSD 195
G+EH DI+R PFR+ G++R IS + WPYLET+TEDV+ I KE+ KPDLIIGNYSD
Sbjct: 122 GSEHCDILRVPFRDGKGMVRKWISRFEVWPYLETFTEDVAAEIAKELQGKPDLIIGNYSD 301
Query: 196 GNLVATLLAH 225
GN+VA+LLAH
Sbjct: 302 GNIVASLLAH 331
>gb|BU820099.1|BU820099 UA51CPC06 Populus tremula cambium cDNA library Populus tremula cDNA
5 prime, mRNA sequence
Length = 527
Score = 115 bits (246), Expect = 1e-025
Identities = 46/67 (68%), Positives = 55/67 (82%)
Frame = +1 / +2
Query: 118 YTEDVSXXIMKEMXAKPDLIIGNYSDGNLVATLLAHKLGVTQCTIAHALEKTKYPNSDIY 297
+ ED + I+ E+ PD IIGNYSDGNLVA+LLA+K+GVTQCTIAHALEKTKYP+SDIY
Sbjct: 11 FAEDAASEIVAELQGIPDFIIGNYSDGNLVASLLAYKMGVTQCTIAHALEKTKYPDSDIY 190
Query: 298 LDKFDSQ 318
KFD +
Sbjct: 191 WKKFDDK 211
>gb|BP928788.1|BP928788 BP928788 full-length enriched poplar cDNA library Populus nigra
cDNA clone PnFL1-088_J21.f 5', mRNA sequence
Length = 498
Score = 106 bits (227), Expect(2) = 1e-024
Identities = 43/53 (81%), Positives = 48/53 (90%)
Frame = +1 / +2
Query: 160 AKPDLIIGNYSDGNLVATLLAHKLGVTQCTIAHALEKTKYPNSDIYLDKFDSQ 318
A PD IIGNYSDGNLVA+LLA+K+GVTQCTIAHALEKTKYP+SDIY KFD +
Sbjct: 59 AYPDFIIGNYSDGNLVASLLAYKMGVTQCTIAHALEKTKYPDSDIYWKKFDDK 217
Score = 23.4 bits (45), Expect(2) = 1e-024
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +2 / +3
Query: 110 WRHTLRMFPXK 142
WRH LRM P K
Sbjct: 6 WRHLLRMQPVK 38
>gb|BI128475.1|BI128475 G076P35Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 520
Score = 110 bits (236), Expect = 3e-024
Identities = 44/52 (84%), Positives = 49/52 (94%)
Frame = +1 / +1
Query: 163 KPDLIIGNYSDGNLVATLLAHKLGVTQCTIAHALEKTKYPNSDIYLDKFDSQ 318
KPDLIIGNYSDGN+VA+LLAHKLGVT+CTIAHALEKTKYP+SDIY KFD +
Sbjct: 4 KPDLIIGNYSDGNVVASLLAHKLGVTECTIAHALEKTKYPDSDIYWKKFDEK 159
>gb|CF118999.1|CF118999 MTU10CS.P12.B11 Aspen stem cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 799
Score = 107 bits (228), Expect = 3e-023
Identities = 41/63 (65%), Positives = 50/63 (79%)
Frame = +1 / +1
Query: 16 GTEHTDIIRXPFRNENGILRXXISXXDXWPYLETYTEDVSXXIMKEMXAKPDLIIGNYSD 195
G+EH DI+R PFR+E G++R IS + WPYLETYTEDV+ I KE+ KPDLIIGNYSD
Sbjct: 610 GSEHCDILRVPFRDEKGMVRKWISRFEVWPYLETYTEDVAAEIAKELQGKPDLIIGNYSD 789
Query: 196 GNL 204
GN+
Sbjct: 790 GNV 798
>gb|BI132253.1|BI132253 G134P04Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 321
Score = 105 bits (224), Expect = 1e-022
Identities = 41/65 (63%), Positives = 51/65 (78%)
Frame = +1 / +2
Query: 16 GTEHTDIIRXPFRNENGILRXXISXXDXWPYLETYTEDVSXXIMKEMXAKPDLIIGNYSD 195
G+EH DI+R PFR+ G++R IS + WPYLET+TEDV+ I KE+ KPDLIIGNYSD
Sbjct: 125 GSEHCDILRVPFRDGKGMVRKWISRFEVWPYLETFTEDVAAEIAKELQDKPDLIIGNYSD 304
Query: 196 GNLVA 210
GN+VA
Sbjct: 305 GNIVA 319
Database: Populus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:49 PM
Number of letters in database: 203,408,664
Number of sequences in database: 369,679
Lambda K H
0.317 0.135 0.399
Matrix: BLOSUM62
Number of Hits to DB: 148,776,075
Number of Sequences: 369679
Number of extensions: 1924549
Number of successful extensions: 138838
Number of sequences better than 1.0e-020: 65
length of database: 67,802,888
effective HSP length: 49
effective length of database: 49,688,617
effective search space used: 2782562552
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.6 bits)