TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QBJ4h04.xg.2.2
(494 letters)
Database: Populus_nucl_with_EST.fasta
369,679 sequences; 203,408,664 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CV254823.1|CV254823 WS02411.B21_E17 PTxD-ICC-N-A-14 Popu... 121 3e-040
gb|CV226522.1|CV226522 WS0164.B21_I06 PT-DX-A-7 Populus tri... 121 3e-040
gb|CA824881.1|CA824881 R49G12 two-month-old roots from clon... 123 4e-040
gb|CV281115.1|CV281115 WS0181.B21_A24 PTxD-IL-N-A-9 Populus... 117 8e-039
gb|DT492725.1|DT492725 WS02552.C21_C02 PT-MB-N-A-15 Populus... 117 8e-039
gb|CX175356.1|CX175356 E12_69-113_10.ab1 leaf inoculated wi... 117 8e-039
gb|CX170255.1|CX170255 A05_69-67_01.ab1 leaf inoculated wit... 117 8e-039
gb|DT499690.1|DT499690 WS9991.BR_B03 PT-P-FL-A-2 Populus tr... 121 7e-037
gb|CX183497.1|CX183497 G02_45-45_14.ab1 leaf inoculated wit... 121 4e-036
gb|DT516153.1|DT516153 WS02430.B21_I23 PTxD-ICC-N-A-14 Popu... 121 4e-035
gb|AI163170.1|AI163170 A034p39u Hybrid aspen plasmid librar... 121 6e-035
gb|BI130965.1|BI130965 G113P33Y Populus cambium cDNA librar... 121 1e-031
gb|DT499621.1|DT499621 WS0118.BR_N06 PT-P-FL-A-2 Populus tr... 103 7e-031
gb|DT496208.1|DT496208 WS01122.BR_L21 PT-P-FL-A-2 Populus t... 103 9e-031
gb|CV275792.1|CV275792 WS0177.B21_K03 PTxD-NR-A-8 Populus t... 103 9e-031
gb|CF230497.1|CF230497 PtaC0009B11B1103 Poplar cDNA library... 103 9e-031
gb|CF234885.1|CF234885 PtaJXT0016C7C0705 Poplar cDNA librar... 103 9e-031
gb|CF236473.1|CF236473 PtaJXT3C2C0206 Poplar cDNA library f... 103 9e-031
gb|CF237157.1|CF237157 Ptajxtjxt2G2G0214 Poplar cDNA librar... 103 9e-031
gb|DT498959.1|DT498959 WS0116.BR_N13 PT-P-FL-A-2 Populus tr... 103 9e-031
gb|CF227807.1|CF227807 PtaXM0004H3H0315 Poplar cDNA library... 103 9e-031
gb|CV245577.1|CV245577 WS0257.B21_M23 PT-MB-N-A-15 Populus ... 102 2e-030
gb|DT509779.1|DT509779 WS02424.BR_L04 PTxD-ICC-N-A-14 Popul... 101 2e-030
gb|CV227011.1|CV227011 WS0165.B21_O23 PT-DX-A-7 Populus tri... 102 2e-030
gb|BU895327.1|BU895327 X022E11 Populus wood cDNA library Po... 100 1e-029
gb|BI129316.1|BI129316 G089P01Y Populus cambium cDNA librar... 99 1e-029
gb|CF235176.1|CF235176 PtaJXT0019G11G1113 Poplar cDNA libra... 99 2e-029
gb|CF228514.1|CF228514 PtaXM0013H9H0915 Poplar cDNA library... 99 2e-029
gb|BU896291.1|BU896291 X038E03 Populus wood cDNA library Po... 99 2e-029
gb|CF236101.1|CF236101 PtaJXT0030F3F0311 Poplar cDNA librar... 99 2e-029
gb|BU898117.1|BU898117 X075A09 Populus wood cDNA library Po... 99 2e-029
gb|DT496684.1|DT496684 WS01124.BR_C10 PT-P-FL-A-2 Populus t... 99 2e-029
gb|DT495708.1|DT495708 WS01121.BR_E05 PT-P-FL-A-2 Populus t... 99 2e-029
gb|DT497463.1|DT497463 WS01126.BR_I20 PT-P-FL-A-2 Populus t... 99 2e-029
gb|CV225965.1|CV225965 WS0162.B21_O08 PT-DX-A-7 Populus tri... 99 2e-029
gb|CF228458.1|CF228458 PtaXM0013C1C0105 Poplar cDNA library... 99 2e-029
gb|CF234834.1|CF234834 PtaJXT0015F8F0812 Poplar cDNA librar... 99 2e-029
gb|DT471943.1|DT471943 WS0122.BR_J06 PT-GT-FL-A-3 Populus t... 99 2e-029
gb|CF228743.1|CF228743 PtaXM0016H2H0216 Poplar cDNA library... 99 2e-029
gb|CF236106.1|CF236106 PtaJXT0030F8F0812 Poplar cDNA librar... 99 2e-029
gb|BU837295.1|BU837295 T097B06 Populus apical shoot cDNA li... 119 3e-029
gb|AI166618.1|AI166618 xylem.est.432 Poplar xylem Lambda ZA... 72 5e-029
gb|DT470104.1|DT470104 WS01919.C21_O05 PT-DX-N-A-10 Populus... 97 5e-029
gb|BI128433.1|BI128433 G075P84Y Populus cambium cDNA librar... 84 8e-029
gb|CF235233.1|CF235233 PtaJXT0020D1D0107 Poplar cDNA librar... 96 1e-028
gb|CF228523.1|CF228523 PtaXM0014B11B1103 Poplar cDNA librar... 96 1e-028
gb|DT496662.1|DT496662 WS01124.BR_B03 PT-P-FL-A-2 Populus t... 99 3e-028
gb|CN519236.1|CN519236 GQ0104.B3_D02 GQ010 Populus trichoca... 99 3e-028
gb|BU895812.1|BU895812 X031D06 Populus wood cDNA library Po... 95 3e-028
gb|DT475955.1|DT475955 WS0128.BR_M11 PT-GT-FL-A-3 Populus t... 121 3e-028
gb|BU895202.1|BU895202 X020F05 Populus wood cDNA library Po... 99 4e-028
dbj|AB079510.1| Populus kitakamiensis Pklim1 mRNA for trans... 100 5e-028
gb|CF936757.1|CF936757 PO3009H07 Populus tomentiglandulosa ... 100 5e-028
gb|CF936681.1|CF936681 PO3008H11 Populus tomentiglandulosa ... 100 5e-028
gb|CF237292.1|CF237292 Ptajxtjxt4D10D1008 Poplar cDNA libra... 100 5e-028
gb|CF237302.1|CF237302 Ptajxtjxt4D9D0907 Poplar cDNA librar... 100 5e-028
gb|CF235212.1|CF235212 PtaJXT0020B2B0204 Poplar cDNA librar... 99 5e-028
gb|CK318742.1|CK318742 X9P02h02 Populus stem seasonal libra... 100 5e-028
gb|CF235346.1|CF235346 PtaJXT0021G2G0214 Poplar cDNA librar... 99 5e-028
gb|BI127701.1|BI127701 G064P56Y Populus cambium cDNA librar... 99 5e-028
gb|AJ773700.1|AJ773700 AJ773700 Populus euphratica shoot 3-... 100 5e-028
gb|DT498550.1|DT498550 WS0115.BR_K17 PT-P-FL-A-2 Populus tr... 100 5e-028
gb|AJ773699.1|AJ773699 AJ773699 Populus euphratica shoot 3-... 100 5e-028
gb|CX178269.1|CX178269 F02_45-106_12.ab1 leaf inoculated wi... 100 5e-028
gb|AJ777272.1|AJ777272 AJ777272 Populus euphratica root 3-6... 100 5e-028
gb|DT499153.1|DT499153 WS0117.BR_H10 PT-P-FL-A-2 Populus tr... 100 5e-028
gb|BU885608.1|BU885608 R033F04 Populus root cDNA library Po... 99 5e-028
gb|BI129342.1|BI129342 G089P41Y Populus cambium cDNA librar... 99 5e-028
gb|CK099458.1|CK099458 A068P58.5pR Hybrid aspen plasmid lib... 99 5e-028
gb|AI165319.1|AI165319 A081P18U Hybrid aspen plasmid librar... 123 6e-028
gb|CF231514.1|CF231514 PtaC0022D12D1208 Poplar cDNA library... 99 7e-028
gb|CF234221.1|CF234221 PtaJXO4A11A1101 Poplar cDNA library ... 94 7e-028
gb|DT496851.1|DT496851 WS01124.BR_L17 PT-P-FL-A-2 Populus t... 100 9e-028
gb|CV265606.1|CV265606 WS02027.B21_L22 PTxN-IB-N-A-11 Popul... 100 1e-027
gb|CF234358.1|CF234358 Ptajxojxo1F12F1212 Poplar cDNA libra... 100 1e-027
gb|CX171108.1|CX171108 C10_69-40_06.ab1 leaf inoculated wit... 100 2e-027
gb|CF227630.1|CF227630 PtaXM0002E2E0210 Poplar cDNA library... 103 2e-027
gb|DT494830.1|DT494830 WS01119.BR_J02 PT-P-FL-A-2 Populus t... 98 2e-026
gb|CF236568.1|CF236568 PtaJXT4D4D0408 Poplar cDNA library f... 93 3e-026
gb|BI129071.1|BI129071 G085P54Y Populus cambium cDNA librar... 97 3e-026
gb|BI131598.1|BI131598 G123P10Y Populus cambium cDNA librar... 99 3e-026
gb|CF229799.1|CF229799 PtaXM0029H12H1216 Poplar cDNA librar... 56 8e-026
gb|CF235467.1|CF235467 PtaJXT0023B6B0604 Poplar cDNA librar... 116 9e-026
gb|CV232744.1|CV232744 WS0198.B21_I13 PT-DX-N-A-10 Populus ... 74 1e-025
gb|CK102140.1|CK102140 G065P93.5pR Populus tension wood cDN... 73 1e-025
gb|CF235760.1|CF235760 PtaJXT0026F6F0612 Poplar cDNA librar... 103 1e-025
gb|BI130487.1|BI130487 G106P31Y Populus cambium cDNA librar... 58 1e-025
gb|BI127782.1|BI127782 G065P93Y Populus cambium cDNA librar... 73 2e-025
gb|CK102633.1|CK102633 G085P54.5pR Populus tension wood cDN... 57 3e-025
gb|CV254810.1|CV254810 WS02411.B21_D24 PTxD-ICC-N-A-14 Popu... 90 7e-025
gb|DT514395.1|DT514395 WS02424.B21_L04 PTxD-ICC-N-A-14 Popu... 84 7e-025
gb|AJ775148.1|AJ775148 AJ775148 Populus euphratica shoot 3-... 93 1e-024
gb|CK108340.1|CK108340 GO85P54 Populus tension wood cDNA li... 99 2e-024
gb|CF230725.1|CF230725 PtaC0012C12C1206 Poplar cDNA library... 83 3e-023
gb|CF232794.1|CF232794 PtaJXO0015H5H0515 Poplar cDNA librar... 75 2e-022
gb|BI127517.1|BI127517 G061P75Y Populus cambium cDNA librar... 99 2e-022
gb|CF228385.1|CF228385 PtaXM0012D11D1107 Poplar cDNA librar... 75 3e-022
gb|AJ776231.1|AJ776231 AJ776231 Populus euphratica root 3-6... 103 7e-022
gb|CN518334.1|CN518334 GQ0094.B3_K11 GQ009 Populus trichoca... 102 2e-021
gb|CF235707.1|CF235707 PtaJXT0026B11B1103 Poplar cDNA libra... 78 3e-021
gb|BU809315.1|BU809315 UL56PD02 Populus leaf cDNA library P... 100 5e-021
gb|CF231651.1|CF231651 PtaC0024A8A0802 Poplar cDNA library ... 100 5e-021
gb|CN518802.1|CN518802 GQ0102.B3_C20 GQ010 Populus trichoca... 100 5e-021
gb|CF235812.1|CF235812 PtaJXT0027C7C0705 Poplar cDNA librar... 100 6e-021
>gb|CV254823.1|CV254823 WS02411.B21_E17 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02411_E17 3', mRNA sequence
Length = 942
Score = 121 bits (258), Expect(2) = 3e-040
Identities = 46/86 (53%), Positives = 58/86 (67%)
Frame = +2 / -2
Query: 68 TMSFTGXQDKCTXCDKTXHFIDLLTXXXXIYHKTCXXXXHCKGXXSMCSYSSMDXXLYCK 247
TMSFTG Q KC C+KT + ++LL+ YHKTC HCKG + +YSSM+ LYCK
Sbjct: 833 TMSFTGTQQKCKACEKTVYPMELLSADGVAYHKTCFKCFHCKGTLKLSNYSSMEGVLYCK 654
Query: 248 THFEQLFKXTGSFSKNFTPXXXSSDK 325
HFEQLFK TG+F+KNF S++K
Sbjct: 653 PHFEQLFKETGNFNKNFQSPAKSAEK 576
Score = 63.8 bits (133), Expect(2) = 3e-040
Identities = 26/54 (48%), Positives = 32/54 (59%)
Frame = +2 / -2
Query: 332 LTRAPSKLSSAFSGTXDKXAACQKTXYPXXXLTLXXXXYHKXXXKCSXXXXXLT 493
LTR+PSK +S FSGT +K A C KT YP +T+ YHK KCS +T
Sbjct: 563 LTRSPSKAASMFSGTQEKCATCGKTAYPLEKVTVESQAYHKSCFKCSHGGCAIT 402
>gb|CV226522.1|CV226522 WS0164.B21_I06 PT-DX-A-7 Populus trichocarpa cDNA clone WS0164_I06
3', mRNA sequence
Length = 862
Score = 121 bits (258), Expect(2) = 3e-040
Identities = 46/86 (53%), Positives = 58/86 (67%)
Frame = +2 / -1
Query: 68 TMSFTGXQDKCTXCDKTXHFIDLLTXXXXIYHKTCXXXXHCKGXXSMCSYSSMDXXLYCK 247
TMSFTG Q KC C+KT + ++LL+ YHKTC HCKG + +YSSM+ LYCK
Sbjct: 820 TMSFTGTQQKCKACEKTVYPMELLSADGVAYHKTCFKCFHCKGTLKLSNYSSMEGVLYCK 641
Query: 248 THFEQLFKXTGSFSKNFTPXXXSSDK 325
HFEQLFK TG+F+KNF S++K
Sbjct: 640 PHFEQLFKETGNFNKNFQSPAKSAEK 563
Score = 63.8 bits (133), Expect(2) = 3e-040
Identities = 26/54 (48%), Positives = 32/54 (59%)
Frame = +2 / -1
Query: 332 LTRAPSKLSSAFSGTXDKXAACQKTXYPXXXLTLXXXXYHKXXXKCSXXXXXLT 493
LTR+PSK +S FSGT +K A C KT YP +T+ YHK KCS +T
Sbjct: 550 LTRSPSKAASMFSGTQEKCATCGKTAYPLEKVTVESQAYHKSCFKCSHGGCAIT 389
>gb|CA824881.1|CA824881 R49G12 two-month-old roots from clone 'Beaupre' Populus trichocarpa
x Populus deltoides cDNA 5', mRNA sequence
Length = 662
Score = 123 bits (263), Expect(2) = 4e-040
Identities = 46/77 (59%), Positives = 54/77 (70%)
Frame = +2 / +3
Query: 68 TMSFTGXQDKCTXCDKTXHFIDLLTXXXXIYHKTCXXXXHCKGXXSMCSYSSMDXXLYCK 247
TM+FTG DKC CDKT +F+D+++ YHK+C HCKG M +YSSMD LYCK
Sbjct: 141 TMAFTGTLDKCKACDKTVYFVDMMSLEGVPYHKSCFKCSHCKGTLVMSNYSSMDGVLYCK 320
Query: 248 THFEQLFKXTGSFSKNF 298
THFEQLFK G FSKNF
Sbjct: 321 THFEQLFKEGGDFSKNF 371
Score = 61.1 bits (127), Expect(2) = 4e-040
Identities = 26/54 (48%), Positives = 32/54 (59%)
Frame = +2 / +3
Query: 332 LTRAPSKLSSAFSGTXDKXAACQKTXYPXXXLTLXXXXYHKXXXKCSXXXXXLT 493
L+R PSKLSS F GT DK +AC KT YP +T+ YHK +C+ LT
Sbjct: 402 LSRIPSKLSSVFCGTQDKCSACGKTVYPLEKVTMEGECYHKTCFRCAYGGCPLT 563
>gb|CV281115.1|CV281115 WS0181.B21_A24 PTxD-IL-N-A-9 Populus trichocarpa x Populus
deltoides cDNA clone WS0181_A24 3', mRNA sequence
Length = 912
Score = 117 bits (251), Expect(2) = 8e-039
Identities = 44/86 (51%), Positives = 58/86 (67%)
Frame = +2 / -1
Query: 68 TMSFTGXQDKCTXCDKTXHFIDLLTXXXXIYHKTCXXXXHCKGXXSMCSYSSMDXXLYCK 247
TMSFTG Q KC C+KT + ++LL+ YHK+C HCKG + +YSSM+ LYCK
Sbjct: 858 TMSFTGTQQKCKACEKTVYPMELLSADGVAYHKSCFKCFHCKGTLKLSNYSSMEGVLYCK 679
Query: 248 THFEQLFKXTGSFSKNFTPXXXSSDK 325
HF+QLFK TG+F+KNF S++K
Sbjct: 678 PHFDQLFKETGNFNKNFQSPAKSAEK 601
Score = 62.0 bits (129), Expect(2) = 8e-039
Identities = 25/54 (46%), Positives = 31/54 (57%)
Frame = +2 / -1
Query: 332 LTRAPSKLSSAFSGTXDKXAACQKTXYPXXXLTLXXXXYHKXXXKCSXXXXXLT 493
LTR+PSK + FSGT +K A C KT YP +T+ YHK KCS +T
Sbjct: 588 LTRSPSKAAGMFSGTQEKCATCGKTAYPLEKVTVESQAYHKSCFKCSHGGCAIT 427
>gb|DT492725.1|DT492725 WS02552.C21_C02 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02552_C02 3', mRNA sequence
Length = 890
Score = 117 bits (251), Expect(2) = 8e-039
Identities = 44/86 (51%), Positives = 58/86 (67%)
Frame = +2 / -2
Query: 68 TMSFTGXQDKCTXCDKTXHFIDLLTXXXXIYHKTCXXXXHCKGXXSMCSYSSMDXXLYCK 247
TMSFTG Q KC C+KT + ++LL+ YHK+C HCKG + +YSSM+ LYCK
Sbjct: 844 TMSFTGTQQKCKACEKTVYPMELLSTDGVAYHKSCFKCFHCKGTLKLSNYSSMEGVLYCK 665
Query: 248 THFEQLFKXTGSFSKNFTPXXXSSDK 325
HF+QLFK TG+F+KNF S++K
Sbjct: 664 PHFDQLFKETGNFNKNFQSPAKSAEK 587
Score = 62.0 bits (129), Expect(2) = 8e-039
Identities = 25/54 (46%), Positives = 31/54 (57%)
Frame = +2 / -2
Query: 332 LTRAPSKLSSAFSGTXDKXAACQKTXYPXXXLTLXXXXYHKXXXKCSXXXXXLT 493
LTR+PSK + FSGT +K A C KT YP +T+ YHK KCS +T
Sbjct: 574 LTRSPSKAAGMFSGTQEKCATCGKTAYPLEKVTVESQAYHKSCFKCSHGGCAIT 413
>gb|CX175356.1|CX175356 E12_69-113_10.ab1 leaf inoculated with Marssonia pathogen of
Populus deltoides Populus deltoides cDNA, mRNA sequence
Length = 712
Score = 117 bits (251), Expect(2) = 8e-039
Identities = 44/86 (51%), Positives = 58/86 (67%)
Frame = +2 / +2
Query: 68 TMSFTGXQDKCTXCDKTXHFIDLLTXXXXIYHKTCXXXXHCKGXXSMCSYSSMDXXLYCK 247
TMSFTG Q KC C+KT + ++LL+ YHK+C HCKG + +YSSM+ LYCK
Sbjct: 164 TMSFTGTQQKCKACEKTVYPMELLSADGVAYHKSCFKCFHCKGTLKLSNYSSMEGVLYCK 343
Query: 248 THFEQLFKXTGSFSKNFTPXXXSSDK 325
HF+QLFK TG+F+KNF S++K
Sbjct: 344 PHFDQLFKETGNFNKNFQSPAKSAEK 421
Score = 62.0 bits (129), Expect(2) = 8e-039
Identities = 25/54 (46%), Positives = 31/54 (57%)
Frame = +2 / +2
Query: 332 LTRAPSKLSSAFSGTXDKXAACQKTXYPXXXLTLXXXXYHKXXXKCSXXXXXLT 493
LTR+PSK + FSGT +K A C KT YP +T+ YHK KCS +T
Sbjct: 434 LTRSPSKAAGMFSGTQEKCATCGKTAYPLEKVTVESQAYHKSCFKCSHGGCAIT 595
>gb|CX170255.1|CX170255 A05_69-67_01.ab1 leaf inoculated with Marssonia pathogen of Populus
deltoides Populus deltoides cDNA, mRNA sequence
Length = 681
Score = 117 bits (251), Expect(2) = 8e-039
Identities = 44/86 (51%), Positives = 58/86 (67%)
Frame = +2 / +1
Query: 68 TMSFTGXQDKCTXCDKTXHFIDLLTXXXXIYHKTCXXXXHCKGXXSMCSYSSMDXXLYCK 247
TMSFTG Q KC C+KT + ++LL+ YHK+C HCKG + +YSSM+ LYCK
Sbjct: 160 TMSFTGTQQKCKACEKTVYPMELLSADGVAYHKSCFKCFHCKGTLKLSNYSSMEGVLYCK 339
Query: 248 THFEQLFKXTGSFSKNFTPXXXSSDK 325
HF+QLFK TG+F+KNF S++K
Sbjct: 340 PHFDQLFKETGNFNKNFQSPAKSAEK 417
Score = 62.0 bits (129), Expect(2) = 8e-039
Identities = 25/54 (46%), Positives = 31/54 (57%)
Frame = +2 / +1
Query: 332 LTRAPSKLSSAFSGTXDKXAACQKTXYPXXXLTLXXXXYHKXXXKCSXXXXXLT 493
LTR+PSK + FSGT +K A C KT YP +T+ YHK KCS +T
Sbjct: 430 LTRSPSKAAGMFSGTQEKCATCGKTAYPLEKVTVESQAYHKSCFKCSHGGCAIT 591
>gb|DT499690.1|DT499690 WS9991.BR_B03 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01110_H14 5', mRNA sequence
Length = 535
Score = 121 bits (258), Expect(2) = 7e-037
Identities = 46/86 (53%), Positives = 58/86 (67%)
Frame = +2 / +2
Query: 68 TMSFTGXQDKCTXCDKTXHFIDLLTXXXXIYHKTCXXXXHCKGXXSMCSYSSMDXXLYCK 247
TMSFTG Q KC C+KT + ++LL+ YHKTC HCKG + +YSSM+ LYCK
Sbjct: 146 TMSFTGTQQKCKACEKTVYPMELLSADGVAYHKTCFKCFHCKGTLKLSNYSSMEGVLYCK 325
Query: 248 THFEQLFKXTGSFSKNFTPXXXSSDK 325
HFEQLFK TG+F+KNF S++K
Sbjct: 326 PHFEQLFKETGNFNKNFQSPAKSAEK 403
Score = 52.4 bits (108), Expect(2) = 7e-037
Identities = 21/40 (52%), Positives = 25/40 (62%)
Frame = +2 / +2
Query: 332 LTRAPSKLSSAFSGTXDKXAACQKTXYPXXXLTLXXXXYH 451
LTR+PSK +S FSGT K A C KT YP +T+ YH
Sbjct: 416 LTRSPSKAASMFSGTQXKCATCGKTAYPLEKVTVESQAYH 535
>gb|CX183497.1|CX183497 G02_45-45_14.ab1 leaf inoculated with Marssonia pathogen of Populus
euramericana Populus x canadensis cDNA, mRNA sequence
Length = 626
Score = 121 bits (258), Expect(2) = 4e-036
Identities = 46/86 (53%), Positives = 58/86 (67%)
Frame = +2 / +3
Query: 68 TMSFTGXQDKCTXCDKTXHFIDLLTXXXXIYHKTCXXXXHCKGXXSMCSYSSMDXXLYCK 247
TMSFTG Q KC C+KT + ++LL+ YHKTC HCKG + +YSSM+ LYCK
Sbjct: 240 TMSFTGTQQKCKACEKTVYPMELLSADGVAYHKTCFKCFHCKGTLKLSNYSSMEGVLYCK 419
Query: 248 THFEQLFKXTGSFSKNFTPXXXSSDK 325
HFEQLFK TG+F+KNF S++K
Sbjct: 420 PHFEQLFKETGNFNKNFQSPAKSAEK 497
Score = 49.6 bits (102), Expect(2) = 4e-036
Identities = 21/39 (53%), Positives = 25/39 (64%)
Frame = +2 / +3
Query: 332 LTRAPSKLSSAFSGTXDKXAACQKTXYPXXXLTLXXXXY 448
LTR+PSK +S FSGT +K AAC KT YP T+ Y
Sbjct: 510 LTRSPSKAASMFSGTQEKCAACGKTAYPLEKGTVESQAY 626
>gb|DT516153.1|DT516153 WS02430.B21_I23 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02430_I23 3', mRNA sequence
Length = 420
Score = 121 bits (258), Expect(2) = 4e-035
Identities = 46/86 (53%), Positives = 58/86 (67%)
Frame = +2 / -1
Query: 68 TMSFTGXQDKCTXCDKTXHFIDLLTXXXXIYHKTCXXXXHCKGXXSMCSYSSMDXXLYCK 247
TMSFTG Q KC C+KT + ++LL+ YHKTC HCKG + +YSSM+ LYCK
Sbjct: 354 TMSFTGTQQKCKACEKTVYPMELLSADGVAYHKTCFKCFHCKGTLKLSNYSSMEGVLYCK 175
Query: 248 THFEQLFKXTGSFSKNFTPXXXSSDK 325
HFEQLFK TG+F+KNF S++K
Sbjct: 174 PHFEQLFKETGNFNKNFQSPAKSAEK 97
Score = 46.0 bits (94), Expect(2) = 4e-035
Identities = 18/28 (64%), Positives = 21/28 (75%)
Frame = +2 / -1
Query: 332 LTRAPSKLSSAFSGTXDKXAACQKTXYP 415
LTR+PSK +S FSGT +K A C KT YP
Sbjct: 84 LTRSPSKAASMFSGTQEKCATCGKTAYP 1
>gb|AI163170.1|AI163170 A034p39u Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA 5', mRNA sequence
Length = 497
Score = 121 bits (258), Expect(2) = 6e-035
Identities = 46/86 (53%), Positives = 58/86 (67%)
Frame = +2 / +2
Query: 68 TMSFTGXQDKCTXCDKTXHFIDLLTXXXXIYHKTCXXXXHCKGXXSMCSYSSMDXXLYCK 247
TMSFTG Q KC C+KT + ++LL+ YHKTC HCKG + +YSSM+ LYCK
Sbjct: 101 TMSFTGTQQKCKACEKTVYPMELLSADGVAYHKTCFKCFHCKGTLKLSNYSSMEGVLYCK 280
Query: 248 THFEQLFKXTGSFSKNFTPXXXSSDK 325
HFEQLFK TG+F+KNF S++K
Sbjct: 281 PHFEQLFKETGNFNKNFQSPAKSAEK 358
Score = 46.0 bits (94), Expect(2) = 6e-035
Identities = 18/28 (64%), Positives = 21/28 (75%)
Frame = +2 / +2
Query: 332 LTRAPSKLSSAFSGTXDKXAACQKTXYP 415
LTR+PSK +S FSGT +K A C KT YP
Sbjct: 371 LTRSPSKAASMFSGTQEKCATCGKTAYP 454
>gb|BI130965.1|BI130965 G113P33Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 565
Score = 121 bits (258), Expect(2) = 1e-031
Identities = 46/86 (53%), Positives = 58/86 (67%)
Frame = +2 / +3
Query: 68 TMSFTGXQDKCTXCDKTXHFIDLLTXXXXIYHKTCXXXXHCKGXXSMCSYSSMDXXLYCK 247
TMSFTG Q KC C+KT + ++LL+ YHKTC HCKG + +YSSM+ LYCK
Sbjct: 228 TMSFTGTQQKCKACEKTVYPMELLSADGVAYHKTCFKCFHCKGTLKLSNYSSMEGVLYCK 407
Query: 248 THFEQLFKXTGSFSKNFTPXXXSSDK 325
HFEQLFK TG+F+KNF S++K
Sbjct: 408 PHFEQLFKETGNFNKNFQSPAKSAEK 485
Score = 34.5 bits (69), Expect(2) = 1e-031
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = +2 / +3
Query: 332 LTRAPSKLSSAFSGTXDKXAAC 397
LTR+PS+ +S FSGT +K A C
Sbjct: 498 LTRSPSRAASMFSGTQEKCATC 563
>gb|DT499621.1|DT499621 WS0118.BR_N06 PT-P-FL-A-2 Populus trichocarpa cDNA clone WS0118_N06
5', mRNA sequence
Length = 655
Score = 103 bits (219), Expect(2) = 7e-031
Identities = 36/75 (48%), Positives = 47/75 (62%)
Frame = +2 / +3
Query: 74 SFTGXQDKCTXCDKTXHFIDLLTXXXXIYHKTCXXXXHCKGXXSMCSYSSMDXXLYCKTH 253
+F G Q KC CDKT + +D LT IYHK C HC+G + +YSS + LYC+ H
Sbjct: 114 AFAGTQQKCMACDKTVYLVDKLTADNRIYHKACFRCHHCRGTLKLSNYSSFEGVLYCRPH 293
Query: 254 FEQLFKXTGSFSKNF 298
++QLFK TGS K+F
Sbjct: 294 YDQLFKRTGSLDKSF 338
Score = 50.1 bits (103), Expect(2) = 7e-031
Identities = 20/58 (34%), Positives = 29/58 (50%)
Frame = +2 / +3
Query: 299 TPXXXSSDKXXLTRAPSKLSSAFSGTXDKXAACQKTXYPXXXLTLXXXXYHKXXXKCS 472
TP +K SK+S+ F+GT +K C KT YP +T+ YH+ KC+
Sbjct: 345 TPKIVKPEKPVDNENASKVSNLFAGTREKCVGCNKTVYPIEKVTVNGTQYHRSCFKCT 518
>gb|DT496208.1|DT496208 WS01122.BR_L21 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01122_L21 5', mRNA sequence
Length = 926
Score = 103 bits (219), Expect(2) = 9e-031
Identities = 36/75 (48%), Positives = 47/75 (62%)
Frame = +2 / +3
Query: 74 SFTGXQDKCTXCDKTXHFIDLLTXXXXIYHKTCXXXXHCKGXXSMCSYSSMDXXLYCKTH 253
+F G Q KC CDKT + +D LT IYHK C HC+G + +YSS + LYC+ H
Sbjct: 114 AFAGTQQKCMACDKTVYLVDKLTADNRIYHKACFRCHHCRGTLKLSNYSSFEGVLYCRPH 293
Query: 254 FEQLFKXTGSFSKNF 298
++QLFK TGS K+F
Sbjct: 294 YDQLFKRTGSLDKSF 338
Score = 49.6 bits (102), Expect(2) = 9e-031
Identities = 20/58 (34%), Positives = 29/58 (50%)
Frame = +2 / +3
Query: 299 TPXXXSSDKXXLTRAPSKLSSAFSGTXDKXAACQKTXYPXXXLTLXXXXYHKXXXKCS 472
TP +K SK+S+ F+GT +K C KT YP +T+ YH+ KC+
Sbjct: 345 TPKIVKPEKPVDNENASKVSNLFAGTREKCVGCNKTVYPIEKVTVNGTPYHRSCFKCT 518
>gb|CV275792.1|CV275792 WS0177.B21_K03 PTxD-NR-A-8 Populus trichocarpa x Populus deltoides
cDNA clone WS0177_K03 3', mRNA sequence
Length = 875
Score = 103 bits (219), Expect(2) = 9e-031
Identities = 36/75 (48%), Positives = 47/75 (62%)
Frame = +2 / +1
Query: 74 SFTGXQDKCTXCDKTXHFIDLLTXXXXIYHKTCXXXXHCKGXXSMCSYSSMDXXLYCKTH 253
+F G Q KC CDKT + +D LT IYHK C HC+G + +YSS + LYC+ H
Sbjct: 103 AFAGTQQKCMACDKTVYLVDKLTADNRIYHKACFRCHHCRGTLKLSNYSSFEGVLYCRPH 282
Query: 254 FEQLFKXTGSFSKNF 298
++QLFK TGS K+F
Sbjct: 283 YDQLFKRTGSLDKSF 327
Score = 49.6 bits (102), Expect(2) = 9e-031
Identities = 20/58 (34%), Positives = 29/58 (50%)
Frame = +2 / +1
Query: 299 TPXXXSSDKXXLTRAPSKLSSAFSGTXDKXAACQKTXYPXXXLTLXXXXYHKXXXKCS 472
TP +K SK+S+ F+GT +K C KT YP +T+ YH+ KC+
Sbjct: 334 TPKIVKPEKPVDNENASKVSNLFAGTREKCVGCNKTVYPIEKVTVNGTPYHRSCFKCT 507
>gb|CF230497.1|CF230497 PtaC0009B11B1103 Poplar cDNA library from cambial zone Populus alba
x Populus tremula cDNA 5', mRNA sequence
Length = 772
Score = 103 bits (219), Expect(2) = 9e-031
Identities = 36/75 (48%), Positives = 47/75 (62%)
Frame = +2 / +2
Query: 74 SFTGXQDKCTXCDKTXHFIDLLTXXXXIYHKTCXXXXHCKGXXSMCSYSSMDXXLYCKTH 253
+F G Q KC CDKT + +D LT IYHK C HC+G + +YSS + LYC+ H
Sbjct: 122 AFAGTQQKCMACDKTVYLVDKLTADNRIYHKACFRCHHCRGTLKLSNYSSFEGVLYCRPH 301
Query: 254 FEQLFKXTGSFSKNF 298
++QLFK TGS K+F
Sbjct: 302 YDQLFKRTGSLDKSF 346
Score = 49.6 bits (102), Expect(2) = 9e-031
Identities = 20/58 (34%), Positives = 29/58 (50%)
Frame = +2 / +2
Query: 299 TPXXXSSDKXXLTRAPSKLSSAFSGTXDKXAACQKTXYPXXXLTLXXXXYHKXXXKCS 472
TP +K SK+S+ F+GT +K C KT YP +T+ YH+ KC+
Sbjct: 353 TPKIAKPEKPVDNENASKVSNLFAGTREKCVGCNKTVYPIEKVTVNGTPYHRRCFKCT 526
>gb|CF234885.1|CF234885 PtaJXT0016C7C0705 Poplar cDNA library from young tension xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 772
Score = 103 bits (219), Expect(2) = 9e-031
Identities = 36/75 (48%), Positives = 47/75 (62%)
Frame = +2 / +1
Query: 74 SFTGXQDKCTXCDKTXHFIDLLTXXXXIYHKTCXXXXHCKGXXSMCSYSSMDXXLYCKTH 253
+F G Q KC CDKT + +D LT IYHK C HC+G + +YSS + LYC+ H
Sbjct: 124 AFAGTQQKCMACDKTVYLVDKLTADNRIYHKACFRCHHCRGTLKLSNYSSFEGVLYCRPH 303
Query: 254 FEQLFKXTGSFSKNF 298
++QLFK TGS K+F
Sbjct: 304 YDQLFKRTGSLDKSF 348
Score = 49.6 bits (102), Expect(2) = 9e-031
Identities = 20/58 (34%), Positives = 29/58 (50%)
Frame = +2 / +1
Query: 299 TPXXXSSDKXXLTRAPSKLSSAFSGTXDKXAACQKTXYPXXXLTLXXXXYHKXXXKCS 472
TP +K SK+S+ F+GT +K C KT YP +T+ YH+ KC+
Sbjct: 355 TPKIVKPEKPVDNENASKVSNLFAGTREKCVGCNKTVYPIEKVTVNGTPYHRSCFKCT 528
>gb|CF236473.1|CF236473 PtaJXT3C2C0206 Poplar cDNA library from young tension xylem Populus
alba x Populus tremula cDNA 5', mRNA sequence
Length = 752
Score = 103 bits (219), Expect(2) = 9e-031
Identities = 36/75 (48%), Positives = 47/75 (62%)
Frame = +2 / +2
Query: 74 SFTGXQDKCTXCDKTXHFIDLLTXXXXIYHKTCXXXXHCKGXXSMCSYSSMDXXLYCKTH 253
+F G Q KC CDKT + +D LT IYHK C HC+G + +YSS + LYC+ H
Sbjct: 125 AFAGTQQKCMACDKTVYLVDKLTADNRIYHKACFRCHHCRGTLKLSNYSSFEGVLYCRPH 304
Query: 254 FEQLFKXTGSFSKNF 298
++QLFK TGS K+F
Sbjct: 305 YDQLFKRTGSLDKSF 349
Score = 49.6 bits (102), Expect(2) = 9e-031
Identities = 20/58 (34%), Positives = 29/58 (50%)
Frame = +2 / +2
Query: 299 TPXXXSSDKXXLTRAPSKLSSAFSGTXDKXAACQKTXYPXXXLTLXXXXYHKXXXKCS 472
TP +K SK+S+ F+GT +K C KT YP +T+ YH+ KC+
Sbjct: 356 TPKIAKPEKPVDNENASKVSNLFAGTREKCVGCNKTVYPIEKVTVNGTPYHRRCFKCT 529
>gb|CF237157.1|CF237157 Ptajxtjxt2G2G0214 Poplar cDNA library from young tension xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 681
Score = 103 bits (219), Expect(2) = 9e-031
Identities = 36/75 (48%), Positives = 47/75 (62%)
Frame = +2 / +1
Query: 74 SFTGXQDKCTXCDKTXHFIDLLTXXXXIYHKTCXXXXHCKGXXSMCSYSSMDXXLYCKTH 253
+F G Q KC CDKT + +D LT IYHK C HC+G + +YSS + LYC+ H
Sbjct: 127 AFAGTQQKCMACDKTVYLVDKLTADNRIYHKACFRCHHCRGTLKLSNYSSFEGVLYCRPH 306
Query: 254 FEQLFKXTGSFSKNF 298
++QLFK TGS K+F
Sbjct: 307 YDQLFKRTGSLDKSF 351
Score = 49.6 bits (102), Expect(2) = 9e-031
Identities = 20/58 (34%), Positives = 29/58 (50%)
Frame = +2 / +1
Query: 299 TPXXXSSDKXXLTRAPSKLSSAFSGTXDKXAACQKTXYPXXXLTLXXXXYHKXXXKCS 472
TP +K SK+S+ F+GT +K C KT YP +T+ YH+ KC+
Sbjct: 358 TPKIAKPEKPVDNENASKVSNLFAGTREKCVGCNKTVYPIEKVTVNGTPYHRRCFKCT 531
>gb|DT498959.1|DT498959 WS0116.BR_N13 PT-P-FL-A-2 Populus trichocarpa cDNA clone WS0116_N13
5', mRNA sequence
Length = 642
Score = 103 bits (219), Expect(2) = 9e-031
Identities = 36/75 (48%), Positives = 47/75 (62%)
Frame = +2 / +3
Query: 74 SFTGXQDKCTXCDKTXHFIDLLTXXXXIYHKTCXXXXHCKGXXSMCSYSSMDXXLYCKTH 253
+F G Q KC CDKT + +D LT IYHK C HC+G + +YSS + LYC+ H
Sbjct: 114 AFAGTQQKCMACDKTVYLVDKLTADNRIYHKACFRCHHCRGTLKLSNYSSFEGVLYCRPH 293
Query: 254 FEQLFKXTGSFSKNF 298
++QLFK TGS K+F
Sbjct: 294 YDQLFKRTGSLDKSF 338
Score = 49.6 bits (102), Expect(2) = 9e-031
Identities = 20/58 (34%), Positives = 29/58 (50%)
Frame = +2 / +3
Query: 299 TPXXXSSDKXXLTRAPSKLSSAFSGTXDKXAACQKTXYPXXXLTLXXXXYHKXXXKCS 472
TP +K SK+S+ F+GT +K C KT YP +T+ YH+ KC+
Sbjct: 345 TPKIVKPEKPVDNENASKVSNLFAGTREKCVGCNKTVYPIEKVTVNGTPYHRSCFKCT 518
>gb|CF227807.1|CF227807 PtaXM0004H3H0315 Poplar cDNA library from mature xylem Populus alba
x Populus tremula cDNA 5', mRNA sequence
Length = 606
Score = 103 bits (219), Expect(2) = 9e-031
Identities = 36/75 (48%), Positives = 47/75 (62%)
Frame = +2 / +1
Query: 74 SFTGXQDKCTXCDKTXHFIDLLTXXXXIYHKTCXXXXHCKGXXSMCSYSSMDXXLYCKTH 253
+F G Q KC CDKT + +D LT IYHK C HC+G + +YSS + LYC+ H
Sbjct: 127 AFAGTQQKCMACDKTVYLVDKLTADNRIYHKACFRCHHCRGTLKLSNYSSFEGVLYCRPH 306
Query: 254 FEQLFKXTGSFSKNF 298
++QLFK TGS K+F
Sbjct: 307 YDQLFKRTGSLDKSF 351
Score = 49.6 bits (102), Expect(2) = 9e-031
Identities = 21/58 (36%), Positives = 30/58 (51%)
Frame = +2 / +1
Query: 299 TPXXXSSDKXXLTRAPSKLSSAFSGTXDKXAACQKTXYPXXXLTLXXXXYHKXXXKCS 472
TP +K SK+S+ F+GT +K C KT YP +T+ YH+ KC+
Sbjct: 358 TPKIAKPEKPVDNENASKVSNLFAGTREKCVGCNKTVYPIEXVTVNGTPYHRRCFKCT 531
>gb|CV245577.1|CV245577 WS0257.B21_M23 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS0257_M23 3', mRNA sequence
Length = 956
Score = 102 bits (217), Expect(2) = 2e-030
Identities = 37/75 (49%), Positives = 45/75 (60%)
Frame = +2 / -3
Query: 74 SFTGXQDKCTXCDKTXHFIDLLTXXXXIYHKTCXXXXHCKGXXSMCSYSSMDXXLYCKTH 253
+F G KC CDKT + +D LT YHK C HCKG + +YSS + LYCK H
Sbjct: 861 TFAGTTQKCKACDKTVYLVDQLTVDNKFYHKACFRCHHCKGTLKLSNYSSFEGVLYCKPH 682
Query: 254 FEQLFKXTGSFSKNF 298
F+QLFK TGS K+F
Sbjct: 681 FDQLFKMTGSLDKSF 637
Score = 49.2 bits (101), Expect(2) = 2e-030
Identities = 18/42 (42%), Positives = 25/42 (59%)
Frame = +2 / -3
Query: 347 SKLSSAFSGTXDKXAACQKTXYPXXXLTLXXXXYHKXXXKCS 472
SK+SS F+GT +K AC KT YP + + YHK +C+
Sbjct: 579 SKVSSMFAGTQEKCVACNKTVYPLEKVAVDGTSYHKACFRCA 454
>gb|DT509779.1|DT509779 WS02424.BR_L04 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02424_L04 5', mRNA sequence
Length = 909
Score = 101 bits (216), Expect(2) = 2e-030
Identities = 36/74 (48%), Positives = 45/74 (60%)
Frame = +2 / +3
Query: 77 FTGXQDKCTXCDKTXHFIDLLTXXXXIYHKTCXXXXHCKGXXSMCSYSSMDXXLYCKTHF 256
F G KC C+KT +F+D LT +YHK C HCKG + +YSS + LYCK HF
Sbjct: 246 FAGTTQKCKSCEKTVYFVDQLTADDKVYHKACFRCHHCKGTLKLSNYSSFEGVLYCKPHF 425
Query: 257 EQLFKXTGSFSKNF 298
+QL K TGS K+F
Sbjct: 426 DQLLKMTGSLDKSF 467
Score = 49.6 bits (102), Expect(2) = 2e-030
Identities = 18/42 (42%), Positives = 26/42 (61%)
Frame = +2 / +3
Query: 347 SKLSSAFSGTXDKXAACQKTXYPXXXLTLXXXXYHKXXXKCS 472
SK+SS F+GT +K AC+KT YP + + YHK +C+
Sbjct: 525 SKVSSMFAGTQEKCVACKKTVYPIERVAVDGTSYHKACFRCA 650
>gb|CV227011.1|CV227011 WS0165.B21_O23 PT-DX-A-7 Populus trichocarpa cDNA clone WS0165_O23
3', mRNA sequence
Length = 889
Score = 102 bits (217), Expect(2) = 2e-030
Identities = 37/75 (49%), Positives = 45/75 (60%)
Frame = +2 / -1
Query: 74 SFTGXQDKCTXCDKTXHFIDLLTXXXXIYHKTCXXXXHCKGXXSMCSYSSMDXXLYCKTH 253
+F G KC CDKT + +D LT YHK C HCKG + +YSS + LYCK H
Sbjct: 757 TFAGTTQKCKACDKTVYLVDQLTVDNKFYHKACFRCHHCKGTLKLSNYSSFEGVLYCKPH 578
Query: 254 FEQLFKXTGSFSKNF 298
F+QLFK TGS K+F
Sbjct: 577 FDQLFKMTGSLDKSF 533
Score = 49.2 bits (101), Expect(2) = 2e-030
Identities = 18/42 (42%), Positives = 25/42 (59%)
Frame = +2 / -1
Query: 347 SKLSSAFSGTXDKXAACQKTXYPXXXLTLXXXXYHKXXXKCS 472
SK+SS F+GT +K AC KT YP + + YHK +C+
Sbjct: 475 SKVSSMFAGTQEKCVACNKTVYPLEKVAVDGTSYHKACFRCA 350
>gb|BU895327.1|BU895327 X022E11 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 616
Score = 99.6 bits (211), Expect(2) = 1e-029
Identities = 33/75 (44%), Positives = 47/75 (62%)
Frame = +2 / +3
Query: 74 SFTGXQDKCTXCDKTXHFIDLLTXXXXIYHKTCXXXXHCKGXXSMCSYSSMDXXLYCKTH 253
+F+G Q KC CDKT + +D LT ++HK C HC+G + +Y S + LYC+ H
Sbjct: 105 AFSGTQQKCMACDKTAYLVDKLTADNRVFHKACFRCHHCRGTLKLSNYCSFEGVLYCRPH 284
Query: 254 FEQLFKXTGSFSKNF 298
++QLFK TGS K+F
Sbjct: 285 YDQLFKRTGSLDKSF 329
Score = 49.6 bits (102), Expect(2) = 1e-029
Identities = 20/58 (34%), Positives = 29/58 (50%)
Frame = +2 / +3
Query: 299 TPXXXSSDKXXLTRAPSKLSSAFSGTXDKXAACQKTXYPXXXLTLXXXXYHKXXXKCS 472
TP +K SK+S+ F+GT +K C KT YP +T+ YH+ KC+
Sbjct: 336 TPKIVKPEKPVDNENASKVSNLFAGTREKCVGCDKTVYPIEKVTVNGTPYHRSCFKCT 509
>gb|BI129316.1|BI129316 G089P01Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 442
Score = 99.1 bits (210), Expect(2) = 1e-029
Identities = 33/75 (44%), Positives = 47/75 (62%)
Frame = +2 / +2
Query: 74 SFTGXQDKCTXCDKTXHFIDLLTXXXXIYHKTCXXXXHCKGXXSMCSYSSMDXXLYCKTH 253
+F+G Q KC CDKT + +D LT ++HK C HC+G + +Y S + LYC+ H
Sbjct: 17 AFSGTQQKCMACDKTVYLVDKLTADNRVFHKACFRCHHCRGTLKLSNYCSFEGVLYCRPH 196
Query: 254 FEQLFKXTGSFSKNF 298
++QLFK TGS K+F
Sbjct: 197 YDQLFKRTGSLDKSF 241
Score = 49.6 bits (102), Expect(2) = 1e-029
Identities = 20/58 (34%), Positives = 29/58 (50%)
Frame = +2 / +2
Query: 299 TPXXXSSDKXXLTRAPSKLSSAFSGTXDKXAACQKTXYPXXXLTLXXXXYHKXXXKCS 472
TP +K SK+S+ F+GT +K C KT YP +T+ YH+ KC+
Sbjct: 248 TPKIVKPEKPVDNENASKVSNLFAGTREKCVGCDKTVYPIEKVTVNGTPYHRSCFKCT 421
>gb|CF235176.1|CF235176 PtaJXT0019G11G1113 Poplar cDNA library from young tension xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 772
Score = 99.1 bits (210), Expect(2) = 2e-029
Identities = 34/75 (45%), Positives = 48/75 (64%)
Frame = +2 / +2
Query: 74 SFTGXQDKCTXCDKTXHFIDLLTXXXXIYHKTCXXXXHCKGXXSMCSYSSMDXXLYCKTH 253
+F+G Q KC CDKT + +D LT ++HK C HC+G + +Y S + LYC+ H
Sbjct: 95 AFSGTQQKCMACDKTVYLVDKLTADNRVFHKACFXCHHCRGTLKLSNYCSFEGVLYCRPH 274
Query: 254 FEQLFKXTGSFSKNF 298
++QLFK TGS K+F
Sbjct: 275 YDQLFKRTGSLDKSF 319
Score = 49.6 bits (102), Expect(2) = 2e-029
Identities = 20/58 (34%), Positives = 29/58 (50%)
Frame = +2 / +2
Query: 299 TPXXXSSDKXXLTRAPSKLSSAFSGTXDKXAACQKTXYPXXXLTLXXXXYHKXXXKCS 472
TP +K SK+S+ F+GT +K C KT YP +T+ YH+ KC+
Sbjct: 326 TPKIVKPEKPVDNENASKVSNLFAGTREKCVGCDKTVYPIEKVTVNGTPYHRSCFKCT 499
>gb|CF228514.1|CF228514 PtaXM0013H9H0915 Poplar cDNA library from mature xylem Populus alba
x Populus tremula cDNA 5', mRNA sequence
Length = 751
Score = 99.1 bits (210), Expect(2) = 2e-029
Identities = 33/75 (44%), Positives = 47/75 (62%)
Frame = +2 / +2
Query: 74 SFTGXQDKCTXCDKTXHFIDLLTXXXXIYHKTCXXXXHCKGXXSMCSYSSMDXXLYCKTH 253
+F+G Q KC CDKT + +D LT ++HK C HC+G + +Y S + LYC+ H
Sbjct: 98 AFSGTQQKCMACDKTVYLVDKLTADNRVFHKACFRCHHCRGTLKLSNYCSFEGVLYCRPH 277
Query: 254 FEQLFKXTGSFSKNF 298
++QLFK TGS K+F
Sbjct: 278 YDQLFKRTGSLDKSF 322
Score = 49.6 bits (102), Expect(2) = 2e-029
Identities = 20/58 (34%), Positives = 29/58 (50%)
Frame = +2 / +2
Query: 299 TPXXXSSDKXXLTRAPSKLSSAFSGTXDKXAACQKTXYPXXXLTLXXXXYHKXXXKCS 472
TP +K SK+S+ F+GT +K C KT YP +T+ YH+ KC+
Sbjct: 329 TPKIVKPEKPVDNENASKVSNLFAGTREKCVGCDKTVYPIEKVTVNGTPYHRSCFKCT 502
>gb|BU896291.1|BU896291 X038E03 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 723
Score = 99.1 bits (210), Expect(2) = 2e-029
Identities = 33/75 (44%), Positives = 47/75 (62%)
Frame = +2 / +2
Query: 74 SFTGXQDKCTXCDKTXHFIDLLTXXXXIYHKTCXXXXHCKGXXSMCSYSSMDXXLYCKTH 253
+F+G Q KC CDKT + +D LT ++HK C HC+G + +Y S + LYC+ H
Sbjct: 98 AFSGTQQKCMACDKTVYLVDKLTADNRVFHKACFRCHHCRGTLKLSNYCSFEGVLYCRPH 277
Query: 254 FEQLFKXTGSFSKNF 298
++QLFK TGS K+F
Sbjct: 278 YDQLFKRTGSLDKSF 322
Score = 49.6 bits (102), Expect(2) = 2e-029
Identities = 20/58 (34%), Positives = 29/58 (50%)
Frame = +2 / +2
Query: 299 TPXXXSSDKXXLTRAPSKLSSAFSGTXDKXAACQKTXYPXXXLTLXXXXYHKXXXKCS 472
TP +K SK+S+ F+GT +K C KT YP +T+ YH+ KC+
Sbjct: 329 TPKIVKPEKPVDNENASKVSNLFAGTREKCVGCDKTVYPIEKVTVNGTPYHRSCFKCT 502
>gb|CF236101.1|CF236101 PtaJXT0030F3F0311 Poplar cDNA library from young tension xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 622
Score = 99.1 bits (210), Expect(2) = 2e-029
Identities = 33/75 (44%), Positives = 47/75 (62%)
Frame = +2 / +1
Query: 74 SFTGXQDKCTXCDKTXHFIDLLTXXXXIYHKTCXXXXHCKGXXSMCSYSSMDXXLYCKTH 253
+F+G Q KC CDKT + +D LT ++HK C HC+G + +Y S + LYC+ H
Sbjct: 94 AFSGTQQKCMACDKTVYLVDKLTADNRVFHKACFRCHHCRGTLKLSNYCSFEGVLYCRPH 273
Query: 254 FEQLFKXTGSFSKNF 298
++QLFK TGS K+F
Sbjct: 274 YDQLFKRTGSLDKSF 318
Score = 49.6 bits (102), Expect(2) = 2e-029
Identities = 20/58 (34%), Positives = 29/58 (50%)
Frame = +2 / +1
Query: 299 TPXXXSSDKXXLTRAPSKLSSAFSGTXDKXAACQKTXYPXXXLTLXXXXYHKXXXKCS 472
TP +K SK+S+ F+GT +K C KT YP +T+ YH+ KC+
Sbjct: 325 TPKIVKPEKPVDNENASKVSNLFAGTREKCVGCDKTVYPIEKVTVNGTPYHRSCFKCT 498
>gb|BU898117.1|BU898117 X075A09 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 578
Score = 99.1 bits (210), Expect(2) = 2e-029
Identities = 33/75 (44%), Positives = 47/75 (62%)
Frame = +2 / +3
Query: 74 SFTGXQDKCTXCDKTXHFIDLLTXXXXIYHKTCXXXXHCKGXXSMCSYSSMDXXLYCKTH 253
+F+G Q KC CDKT + +D LT ++HK C HC+G + +Y S + LYC+ H
Sbjct: 102 AFSGTQQKCMACDKTVYLVDKLTADNRVFHKACFRCHHCRGTLKLSNYCSFEGVLYCRPH 281
Query: 254 FEQLFKXTGSFSKNF 298
++QLFK TGS K+F
Sbjct: 282 YDQLFKRTGSLDKSF 326
Score = 49.6 bits (102), Expect(2) = 2e-029
Identities = 20/58 (34%), Positives = 29/58 (50%)
Frame = +2 / +3
Query: 299 TPXXXSSDKXXLTRAPSKLSSAFSGTXDKXAACQKTXYPXXXLTLXXXXYHKXXXKCS 472
TP +K SK+S+ F+GT +K C KT YP +T+ YH+ KC+
Sbjct: 333 TPKIVKPEKPVDNENASKVSNLFAGTREKCVGCDKTVYPIEKVTVNGTPYHRSCFKCT 506
>gb|DT496684.1|DT496684 WS01124.BR_C10 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01124_C10 5', mRNA sequence
Length = 888
Score = 98.7 bits (209), Expect(2) = 2e-029
Identities = 33/75 (44%), Positives = 46/75 (61%)
Frame = +2 / +2
Query: 74 SFTGXQDKCTXCDKTXHFIDLLTXXXXIYHKTCXXXXHCKGXXSMCSYSSMDXXLYCKTH 253
+F G Q KC CDKT + +D LT ++HK C HC+G + +Y S + LYC+ H
Sbjct: 188 AFAGTQQKCMACDKTVYLVDKLTADNRVFHKACFRCHHCRGTLKLSNYCSFEGVLYCRPH 367
Query: 254 FEQLFKXTGSFSKNF 298
++QLFK TGS K+F
Sbjct: 368 YDQLFKRTGSLDKSF 412
Score = 49.6 bits (102), Expect(2) = 2e-029
Identities = 20/58 (34%), Positives = 29/58 (50%)
Frame = +2 / +2
Query: 299 TPXXXSSDKXXLTRAPSKLSSAFSGTXDKXAACQKTXYPXXXLTLXXXXYHKXXXKCS 472
TP +K SK+S+ F+GT +K C KT YP +T+ YH+ KC+
Sbjct: 419 TPKIVKPEKPVDNENASKVSNLFAGTREKCVGCDKTVYPIEKVTVNGTPYHRSCFKCT 592
>gb|DT495708.1|DT495708 WS01121.BR_E05 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01121_E05 5', mRNA sequence
Length = 865
Score = 98.7 bits (209), Expect(2) = 2e-029
Identities = 33/75 (44%), Positives = 46/75 (61%)
Frame = +2 / +1
Query: 74 SFTGXQDKCTXCDKTXHFIDLLTXXXXIYHKTCXXXXHCKGXXSMCSYSSMDXXLYCKTH 253
+F G Q KC CDKT + +D LT ++HK C HC+G + +Y S + LYC+ H
Sbjct: 97 AFAGTQQKCMACDKTVYLVDKLTADNRVFHKACFRCHHCRGTLKLSNYCSFEGVLYCRPH 276
Query: 254 FEQLFKXTGSFSKNF 298
++QLFK TGS K+F
Sbjct: 277 YDQLFKRTGSLDKSF 321
Score = 49.6 bits (102), Expect(2) = 2e-029
Identities = 20/58 (34%), Positives = 29/58 (50%)
Frame = +2 / +1
Query: 299 TPXXXSSDKXXLTRAPSKLSSAFSGTXDKXAACQKTXYPXXXLTLXXXXYHKXXXKCS 472
TP +K SK+S+ F+GT +K C KT YP +T+ YH+ KC+
Sbjct: 328 TPKIVKPEKPVDNENASKVSNLFAGTREKCVGCDKTVYPIEKVTVNGTPYHRSCFKCT 501
>gb|DT497463.1|DT497463 WS01126.BR_I20 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01126_I20 5', mRNA sequence
Length = 810
Score = 98.7 bits (209), Expect(2) = 2e-029
Identities = 33/75 (44%), Positives = 46/75 (61%)
Frame = +2 / +3
Query: 74 SFTGXQDKCTXCDKTXHFIDLLTXXXXIYHKTCXXXXHCKGXXSMCSYSSMDXXLYCKTH 253
+F G Q KC CDKT + +D LT ++HK C HC+G + +Y S + LYC+ H
Sbjct: 99 AFAGTQQKCMACDKTVYLVDKLTADNRVFHKACFRCHHCRGTLKLSNYCSFEGVLYCRPH 278
Query: 254 FEQLFKXTGSFSKNF 298
++QLFK TGS K+F
Sbjct: 279 YDQLFKRTGSLDKSF 323
Score = 49.6 bits (102), Expect(2) = 2e-029
Identities = 20/58 (34%), Positives = 29/58 (50%)
Frame = +2 / +3
Query: 299 TPXXXSSDKXXLTRAPSKLSSAFSGTXDKXAACQKTXYPXXXLTLXXXXYHKXXXKCS 472
TP +K SK+S+ F+GT +K C KT YP +T+ YH+ KC+
Sbjct: 330 TPKIVKPEKPVDNENASKVSNLFAGTREKCVGCDKTVYPIEKVTVNGTPYHRSCFKCT 503
>gb|CV225965.1|CV225965 WS0162.B21_O08 PT-DX-A-7 Populus trichocarpa cDNA clone WS0162_O08
3', mRNA sequence
Length = 797
Score = 98.7 bits (209), Expect(2) = 2e-029
Identities = 33/75 (44%), Positives = 46/75 (61%)
Frame = +2 / +3
Query: 74 SFTGXQDKCTXCDKTXHFIDLLTXXXXIYHKTCXXXXHCKGXXSMCSYSSMDXXLYCKTH 253
+F G Q KC CDKT + +D LT ++HK C HC+G + +Y S + LYC+ H
Sbjct: 72 AFAGTQQKCMACDKTVYLVDKLTADNRVFHKACFRCHHCRGTLKLSNYCSFEGVLYCRPH 251
Query: 254 FEQLFKXTGSFSKNF 298
++QLFK TGS K+F
Sbjct: 252 YDQLFKRTGSLDKSF 296
Score = 49.6 bits (102), Expect(2) = 2e-029
Identities = 20/58 (34%), Positives = 29/58 (50%)
Frame = +2 / +3
Query: 299 TPXXXSSDKXXLTRAPSKLSSAFSGTXDKXAACQKTXYPXXXLTLXXXXYHKXXXKCS 472
TP +K SK+S+ F+GT +K C KT YP +T+ YH+ KC+
Sbjct: 303 TPKIVKPEKPVDNENASKVSNLFAGTREKCVGCDKTVYPIEKVTVNGTPYHRSCFKCT 476
>gb|CF228458.1|CF228458 PtaXM0013C1C0105 Poplar cDNA library from mature xylem Populus alba
x Populus tremula cDNA 5', mRNA sequence
Length = 772
Score = 99.1 bits (210), Expect(2) = 2e-029
Identities = 33/75 (44%), Positives = 47/75 (62%)
Frame = +2 / +2
Query: 74 SFTGXQDKCTXCDKTXHFIDLLTXXXXIYHKTCXXXXHCKGXXSMCSYSSMDXXLYCKTH 253
+F+G Q KC CDKT + +D LT ++HK C HC+G + +Y S + LYC+ H
Sbjct: 98 AFSGTQQKCMACDKTVYLVDKLTADNRVFHKACFRCHHCRGTLKLSNYCSFEGVLYCRPH 277
Query: 254 FEQLFKXTGSFSKNF 298
++QLFK TGS K+F
Sbjct: 278 YDQLFKRTGSLDKSF 322
Score = 49.2 bits (101), Expect(2) = 2e-029
Identities = 20/58 (34%), Positives = 28/58 (48%)
Frame = +2 / +2
Query: 299 TPXXXSSDKXXLTRAPSKLSSAFSGTXDKXAACQKTXYPXXXLTLXXXXYHKXXXKCS 472
TP +K SK+S+ F GT +K C KT YP +T+ YH+ KC+
Sbjct: 329 TPKIVKPEKPVDNENASKVSNLFGGTREKCVGCDKTVYPIEKVTVNGTPYHRSCFKCT 502
>gb|CF234834.1|CF234834 PtaJXT0015F8F0812 Poplar cDNA library from young tension xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 752
Score = 99.1 bits (210), Expect(2) = 2e-029
Identities = 33/75 (44%), Positives = 47/75 (62%)
Frame = +2 / +3
Query: 74 SFTGXQDKCTXCDKTXHFIDLLTXXXXIYHKTCXXXXHCKGXXSMCSYSSMDXXLYCKTH 253
+F+G Q KC CDKT + +D LT ++HK C HC+G + +Y S + LYC+ H
Sbjct: 72 AFSGTQQKCMACDKTVYLVDKLTADNRVFHKACFRCHHCRGTLKLSNYCSFEGVLYCRPH 251
Query: 254 FEQLFKXTGSFSKNF 298
++QLFK TGS K+F
Sbjct: 252 YDQLFKRTGSLDKSF 296
Score = 49.2 bits (101), Expect(2) = 2e-029
Identities = 20/58 (34%), Positives = 28/58 (48%)
Frame = +2 / +3
Query: 299 TPXXXSSDKXXLTRAPSKLSSAFSGTXDKXAACQKTXYPXXXLTLXXXXYHKXXXKCS 472
TP +K SK+S+ F GT +K C KT YP +T+ YH+ KC+
Sbjct: 303 TPKIVKPEKPVDNENASKVSNLFGGTREKCVGCDKTVYPIEKVTVNGTPYHRSCFKCT 476
>gb|DT471943.1|DT471943 WS0122.BR_J06 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS0122_J06 5', mRNA sequence
Length = 696
Score = 98.7 bits (209), Expect(2) = 2e-029
Identities = 33/75 (44%), Positives = 46/75 (61%)
Frame = +2 / +2
Query: 74 SFTGXQDKCTXCDKTXHFIDLLTXXXXIYHKTCXXXXHCKGXXSMCSYSSMDXXLYCKTH 253
+F G Q KC CDKT + +D LT ++HK C HC+G + +Y S + LYC+ H
Sbjct: 98 AFAGTQQKCMACDKTVYLVDKLTADNRVFHKACFRCHHCRGTLKLSNYCSFEGVLYCRPH 277
Query: 254 FEQLFKXTGSFSKNF 298
++QLFK TGS K+F
Sbjct: 278 YDQLFKRTGSLDKSF 322
Score = 49.6 bits (102), Expect(2) = 2e-029
Identities = 20/58 (34%), Positives = 29/58 (50%)
Frame = +2 / +2
Query: 299 TPXXXSSDKXXLTRAPSKLSSAFSGTXDKXAACQKTXYPXXXLTLXXXXYHKXXXKCS 472
TP +K SK+S+ F+GT +K C KT YP +T+ YH+ KC+
Sbjct: 329 TPKIVKPEKPVDNENASKVSNLFAGTREKCVGCDKTVYPIEKVTVNGTPYHRSCFKCT 502
>gb|CF228743.1|CF228743 PtaXM0016H2H0216 Poplar cDNA library from mature xylem Populus alba
x Populus tremula cDNA 5', mRNA sequence
Length = 684
Score = 99.1 bits (210), Expect(2) = 2e-029
Identities = 33/75 (44%), Positives = 47/75 (62%)
Frame = +2 / +1
Query: 74 SFTGXQDKCTXCDKTXHFIDLLTXXXXIYHKTCXXXXHCKGXXSMCSYSSMDXXLYCKTH 253
+F+G Q KC CDKT + +D LT ++HK C HC+G + +Y S + LYC+ H
Sbjct: 100 AFSGTQQKCMACDKTVYLVDKLTADNRVFHKACFRCHHCRGTLKLSNYCSFEGVLYCRPH 279
Query: 254 FEQLFKXTGSFSKNF 298
++QLFK TGS K+F
Sbjct: 280 YDQLFKRTGSLDKSF 324
Score = 49.2 bits (101), Expect(2) = 2e-029
Identities = 20/58 (34%), Positives = 28/58 (48%)
Frame = +2 / +1
Query: 299 TPXXXSSDKXXLTRAPSKLSSAFSGTXDKXAACQKTXYPXXXLTLXXXXYHKXXXKCS 472
TP +K SK+S+ F GT +K C KT YP +T+ YH+ KC+
Sbjct: 331 TPKIVKPEKPVDNENASKVSNLFGGTREKCVGCDKTVYPIEKVTVNGTPYHRSCFKCT 504
>gb|CF236106.1|CF236106 PtaJXT0030F8F0812 Poplar cDNA library from young tension xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 685
Score = 99.1 bits (210), Expect(2) = 2e-029
Identities = 33/75 (44%), Positives = 47/75 (62%)
Frame = +2 / +3
Query: 74 SFTGXQDKCTXCDKTXHFIDLLTXXXXIYHKTCXXXXHCKGXXSMCSYSSMDXXLYCKTH 253
+F+G Q KC CDKT + +D LT ++HK C HC+G + +Y S + LYC+ H
Sbjct: 105 AFSGTQQKCMACDKTVYLVDKLTADNRVFHKACFRCHHCRGTLKLSNYCSFEGVLYCRPH 284
Query: 254 FEQLFKXTGSFSKNF 298
++QLFK TGS K+F
Sbjct: 285 YDQLFKRTGSLDKSF 329
Score = 49.2 bits (101), Expect(2) = 2e-029
Identities = 20/58 (34%), Positives = 28/58 (48%)
Frame = +2 / +3
Query: 299 TPXXXSSDKXXLTRAPSKLSSAFSGTXDKXAACQKTXYPXXXLTLXXXXYHKXXXKCS 472
TP +K SK+S+ F GT +K C KT YP +T+ YH+ KC+
Sbjct: 336 TPKIVKPEKPVDNENASKVSNLFGGTREKCVGCDKTVYPIEKVTVNGTPYHRSCFKCT 509
>gb|BU837295.1|BU837295 T097B06 Populus apical shoot cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 569
Score = 119 bits (254), Expect(2) = 3e-029
Identities = 46/86 (53%), Positives = 57/86 (66%)
Frame = +2 / +2
Query: 68 TMSFTGXQDKCTXCDKTXHFIDLLTXXXXIYHKTCXXXXHCKGXXSMCSYSSMDXXLYCK 247
TMSFTG Q KC C+KT + ++LL+ YHKTC HCKG + +YSSM+ LYCK
Sbjct: 248 TMSFTGTQQKCKACEKTVYPMELLSADGVAYHKTCFKCFHCKGTSKLSNYSSMEGVLYCK 427
Query: 248 THFEQLFKXTGSFSKNFTPXXXSSDK 325
HFEQLFK TG+F+KN S+DK
Sbjct: 428 PHFEQLFKETGNFNKNL*SPAKSADK 505
Score = 28.6 bits (56), Expect(2) = 3e-029
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +2 / +2
Query: 332 LTRAPSKLSSAFSGTXD 382
LTR+PSK +S FSGT +
Sbjct: 518 LTRSPSKAASMFSGTQE 568
>gb|AI166618.1|AI166618 xylem.est.432 Poplar xylem Lambda ZAPII library Populus trichocarpa
cDNA 5', mRNA sequence
Length = 612
Score = 72.1 bits (151), Expect(3) = 5e-029
Identities = 26/54 (48%), Positives = 35/54 (64%)
Frame = +2 / +2
Query: 68 TMSFTGXQDKCTXCDKTXHFIDLLTXXXXIYHKTCXXXXHCKGXXSMCSYSSMD 229
TMSFTG Q KC C+KT + ++LL+ YHK+C HCKG + +YSSM+
Sbjct: 200 TMSFTGTQQKCKACEKTVYPMELLSTDGVAYHKSCFKCFHCKGTLKLSNYSSME 361
Score = 49.6 bits (102), Expect(3) = 5e-029
Identities = 18/30 (60%), Positives = 23/30 (76%)
Frame = +2 / +3
Query: 236 LYCKTHFEQLFKXTGSFSKNFTPXXXSSDK 325
LYCK HF+QLFK TG+F+KNF S++K
Sbjct: 369 LYCKPHFDQLFKETGNFNKNFQSPAKSAEK 458
Score = 43.2 bits (88), Expect(3) = 5e-029
Identities = 18/42 (42%), Positives = 21/42 (50%)
Frame = +2 / +1
Query: 347 SKLSSAFSGTXDKXAACQKTXYPXXXLTLXXXXYHKXXXKCS 472
+KL F G K A C KT YP +T+ YHK KCS
Sbjct: 487 AKLLVCFQGHKRKCATCGKTAYPLEKVTVESQAYHKSCFKCS 612
>gb|DT470104.1|DT470104 WS01919.C21_O05 PT-DX-N-A-10 Populus trichocarpa cDNA clone
WS01919_O05 3', mRNA sequence
Length = 856
Score = 97.3 bits (206), Expect(2) = 5e-029
Identities = 32/75 (42%), Positives = 46/75 (61%)
Frame = +2 / -2
Query: 74 SFTGXQDKCTXCDKTXHFIDLLTXXXXIYHKTCXXXXHCKGXXSMCSYSSMDXXLYCKTH 253
+F G Q KC CD+T + +D LT ++HK C HC+G + +Y S + LYC+ H
Sbjct: 840 AFAGTQQKCMACDRTVYLVDKLTADNRVFHKACFRCHHCRGTLKLSNYCSFEGVLYCRPH 661
Query: 254 FEQLFKXTGSFSKNF 298
++QLFK TGS K+F
Sbjct: 660 YDQLFKRTGSLDKSF 616
Score = 49.6 bits (102), Expect(2) = 5e-029
Identities = 20/58 (34%), Positives = 29/58 (50%)
Frame = +2 / -2
Query: 299 TPXXXSSDKXXLTRAPSKLSSAFSGTXDKXAACQKTXYPXXXLTLXXXXYHKXXXKCS 472
TP +K SK+S+ F+GT +K C KT YP +T+ YH+ KC+
Sbjct: 609 TPKIVKPEKPVDNENASKVSNLFAGTREKCVGCDKTVYPIEKVTVNGTPYHRSCFKCT 436
>gb|BI128433.1|BI128433 G075P84Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 563
Score = 84.5 bits (178), Expect(2) = 8e-029
Identities = 30/56 (53%), Positives = 39/56 (69%)
Frame = +2 / +3
Query: 158 YHKTCXXXXHCKGXXSMCSYSSMDXXLYCKTHFEQLFKXTGSFSKNFTPXXXSSDK 325
YHK+C HCKG + +YSSM+ LYCK HF+QLFK TG+F+KNF S++K
Sbjct: 36 YHKSCFKCFHCKGTLKLSNYSSMEGVLYCKPHFDQLFKETGNFNKNFQSAARSAEK 203
Score = 62.0 bits (129), Expect(2) = 8e-029
Identities = 25/54 (46%), Positives = 31/54 (57%)
Frame = +2 / +3
Query: 332 LTRAPSKLSSAFSGTXDKXAACQKTXYPXXXLTLXXXXYHKXXXKCSXXXXXLT 493
LTR+PSK + FSGT +K A C KT YP +T+ YHK KCS +T
Sbjct: 216 LTRSPSKAAGMFSGTQEKCATCGKTAYPLEKVTVESQAYHKSCFKCSHGGCAIT 377
>gb|CF235233.1|CF235233 PtaJXT0020D1D0107 Poplar cDNA library from young tension xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 772
Score = 96.4 bits (204), Expect(2) = 1e-028
Identities = 32/75 (42%), Positives = 46/75 (61%)
Frame = +2 / +1
Query: 74 SFTGXQDKCTXCDKTXHFIDLLTXXXXIYHKTCXXXXHCKGXXSMCSYSSMDXXLYCKTH 253
+F+G KC CDKT + +D LT ++HK C HC+G + +Y S + LYC+ H
Sbjct: 25 AFSGTXQKCMACDKTVYLVDKLTADNRVFHKACFRCHHCRGTLKLSNYCSFEGVLYCRPH 204
Query: 254 FEQLFKXTGSFSKNF 298
++QLFK TGS K+F
Sbjct: 205 YDQLFKRTGSLDKSF 249
Score = 49.6 bits (102), Expect(2) = 1e-028
Identities = 20/58 (34%), Positives = 29/58 (50%)
Frame = +2 / +1
Query: 299 TPXXXSSDKXXLTRAPSKLSSAFSGTXDKXAACQKTXYPXXXLTLXXXXYHKXXXKCS 472
TP +K SK+S+ F+GT +K C KT YP +T+ YH+ KC+
Sbjct: 256 TPKIVKPEKPVDNENASKVSNLFAGTREKCVGCDKTVYPIEKVTVNGTPYHRSCFKCT 429
>gb|CF228523.1|CF228523 PtaXM0014B11B1103 Poplar cDNA library from mature xylem Populus
alba x Populus tremula cDNA 5', mRNA sequence
Length = 763
Score = 96.4 bits (204), Expect(2) = 1e-028
Identities = 32/75 (42%), Positives = 47/75 (62%)
Frame = +2 / +1
Query: 74 SFTGXQDKCTXCDKTXHFIDLLTXXXXIYHKTCXXXXHCKGXXSMCSYSSMDXXLYCKTH 253
+F+G Q KC CDKT + +D LT ++HK C HC+G + +Y S + LYC+ +
Sbjct: 25 AFSGTQQKCMACDKTVYLVDKLTADNRVFHKACFRCHHCRGTLKLSNYCSFEGVLYCRPY 204
Query: 254 FEQLFKXTGSFSKNF 298
++QLFK TGS K+F
Sbjct: 205 YDQLFKGTGSLDKSF 249
Score = 49.6 bits (102), Expect(2) = 1e-028
Identities = 20/58 (34%), Positives = 29/58 (50%)
Frame = +2 / +1
Query: 299 TPXXXSSDKXXLTRAPSKLSSAFSGTXDKXAACQKTXYPXXXLTLXXXXYHKXXXKCS 472
TP +K SK+S+ F+GT +K C KT YP +T+ YH+ KC+
Sbjct: 256 TPKIVKPEKPVDNENASKVSNLFAGTREKCVGCDKTVYPIEKVTVNGTPYHRSCFKCT 429
>gb|DT496662.1|DT496662 WS01124.BR_B03 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01124_B03 5', mRNA sequence
Length = 831
Score = 99.1 bits (210), Expect(2) = 3e-028
Identities = 34/76 (44%), Positives = 46/76 (60%)
Frame = +2 / +3
Query: 71 MSFTGXQDKCTXCDKTXHFIDLLTXXXXIYHKTCXXXXHCKGXXSMCSYSSMDXXLYCKT 250
M+F G KC CDKT + +D L +YHK C HC+G + +Y+S + LYC+
Sbjct: 90 MAFAGTTQKCMACDKTVYLVDRLAADNRVYHKACFRCHHCRGTLKLGNYNSFEGVLYCRP 269
Query: 251 HFEQLFKXTGSFSKNF 298
HF+QLFK TGS K+F
Sbjct: 270 HFDQLFKRTGSLDKSF 317
Score = 45.5 bits (93), Expect(2) = 3e-028
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = +2 / +3
Query: 347 SKLSSAFSGTXDKXAACQKTXYPXXXLTLXXXXYHKXXXKC 469
+K+S+ F+GT DK C+ T YP +++ YHK KC
Sbjct: 378 TKVSTMFAGTRDKCFGCKNTVYPTEKVSVNGTSYHKSCFKC 500
>gb|CN519236.1|CN519236 GQ0104.B3_D02 GQ010 Populus trichocarpa x Populus deltoides cDNA
clone GQ0104_D02 5', mRNA sequence
Length = 801
Score = 99.1 bits (210), Expect(2) = 3e-028
Identities = 34/76 (44%), Positives = 46/76 (60%)
Frame = +2 / +1
Query: 71 MSFTGXQDKCTXCDKTXHFIDLLTXXXXIYHKTCXXXXHCKGXXSMCSYSSMDXXLYCKT 250
M+F G KC CDKT + +D L +YHK C HC+G + +Y+S + LYC+
Sbjct: 112 MAFAGTTQKCMACDKTVYLVDRLAADNRVYHKACFRCHHCRGTLKLGNYNSFEGVLYCRP 291
Query: 251 HFEQLFKXTGSFSKNF 298
HF+QLFK TGS K+F
Sbjct: 292 HFDQLFKRTGSLDKSF 339
Score = 45.5 bits (93), Expect(2) = 3e-028
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = +2 / +1
Query: 347 SKLSSAFSGTXDKXAACQKTXYPXXXLTLXXXXYHKXXXKC 469
+K+S+ F+GT DK C+ T YP +++ YHK KC
Sbjct: 400 TKVSTMFAGTRDKCFGCKNTVYPTEKVSVNGTSYHKSCFKC 522
>gb|BU895812.1|BU895812 X031D06 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 627
Score = 95.0 bits (201), Expect(2) = 3e-028
Identities = 32/75 (42%), Positives = 46/75 (61%)
Frame = +2 / +1
Query: 74 SFTGXQDKCTXCDKTXHFIDLLTXXXXIYHKTCXXXXHCKGXXSMCSYSSMDXXLYCKTH 253
+F+G Q KC CDKT + +D LT ++HK C HC+G + + S + LYC+ H
Sbjct: 103 AFSGTQQKCMACDKTVYLVDKLTADNRVFHKACFRCHHCRGTLKLSNNCSFEGVLYCRPH 282
Query: 254 FEQLFKXTGSFSKNF 298
++QLFK TGS K+F
Sbjct: 283 YDQLFKRTGSLDKSF 327
Score = 49.6 bits (102), Expect(2) = 3e-028
Identities = 20/58 (34%), Positives = 29/58 (50%)
Frame = +2 / +1
Query: 299 TPXXXSSDKXXLTRAPSKLSSAFSGTXDKXAACQKTXYPXXXLTLXXXXYHKXXXKCS 472
TP +K SK+S+ F+GT +K C KT YP +T+ YH+ KC+
Sbjct: 334 TPKIVKPEKPVDNENASKVSNLFAGTREKCVGCDKTVYPIEKVTVNGTPYHRSCFKCT 507
>gb|DT475955.1|DT475955 WS0128.BR_M11 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS0128_M11 5', mRNA sequence
Length = 454
Score = 121 bits (258), Expect(2) = 3e-028
Identities = 46/86 (53%), Positives = 58/86 (67%)
Frame = +2 / +2
Query: 68 TMSFTGXQDKCTXCDKTXHFIDLLTXXXXIYHKTCXXXXHCKGXXSMCSYSSMDXXLYCK 247
TMSFTG Q KC C+KT + ++LL+ YHKTC HCKG + +YSSM+ LYCK
Sbjct: 146 TMSFTGTQQKCKACEKTVYPMELLSADGVAYHKTCFKCFHCKGTLKLSNYSSMEGVLYCK 325
Query: 248 THFEQLFKXTGSFSKNFTPXXXSSDK 325
HFEQLFK TG+F+KNF S++K
Sbjct: 326 PHFEQLFKETGNFNKNFQSPAKSAEK 403
Score = 23.1 bits (44), Expect(2) = 3e-028
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = +2 / +2
Query: 332 LTRAPSKLSSAFS 370
LTR+PSK +S FS
Sbjct: 416 LTRSPSKAASMFS 454
Database: Populus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:49 PM
Number of letters in database: 203,408,664
Number of sequences in database: 369,679
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 148,054,022
Number of Sequences: 369679
Number of extensions: 1235850
Number of successful extensions: 23945
Number of sequences better than 1.0e-020: 147
length of database: 67,802,888
effective HSP length: 50
effective length of database: 49,318,938
effective search space used: 5622358932
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)