TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QBB9c12.pg.2.1
(545 letters)
Database: Populus_nucl_with_EST.fasta
369,679 sequences; 203,408,664 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|DT488152.1|DT488152 WS02535.B21_K09 PT-MB-N-A-15 Populus... 199 2e-050
gb|DT517193.1|DT517193 WS02433.B21_J11 PTxD-ICC-N-A-14 Popu... 198 3e-050
gb|DT483477.1|DT483477 WS02522.B21_L06 PT-MB-N-A-15 Populus... 186 6e-049
gb|DN485267.1|DN485267 M123B10.3pR Populus female catkins c... 186 6e-049
gb|CV239371.1|CV239371 WS0232.B21_D04 PT-MB-A-13 Populus tr... 186 6e-049
gb|CA923539.1|CA923539 MTU7CL.P11.G02 Aspen leaf cDNA Libra... 185 9e-049
gb|DN488227.1|DN488227 R042F04.3pR Populus root cDNA librar... 188 3e-047
gb|DT483393.1|DT483393 WS02522.B21_H12 PT-MB-N-A-15 Populus... 187 5e-047
gb|CX658054.1|CX658054 PO01008G05 Poplar SC cDNA library Po... 182 2e-045
gb|CV257070.1|CV257070 WS0245.B21_J10 PTxD-ICC-N-A-14 Popul... 181 3e-045
gb|DN491046.1|DN491046 UM56TC12.3pR Populus female catkins ... 177 8e-044
gb|CV243415.1|CV243415 WS02518.B21_N01 PT-MB-N-A-15 Populus... 134 1e-036
gb|DN488765.1|DN488765 S031D05.3pR Populus imbibed seed cDN... 134 3e-036
gb|DT504462.1|DT504462 WS01313.B21_H10 PTxD-IL-FL-A-4 Popul... 130 2e-034
gb|DV466266.1|DV466266 MTUNUL1.P49.D07 NUL Populus fremonti... 134 2e-034
gb|DT487894.1|DT487894 WS02534.B21_P09 PT-MB-N-A-15 Populus... 130 2e-034
gb|CV279584.1|CV279584 WS0132.B21_G07 PTxD-IL-FL-A-4 Populu... 130 2e-034
gb|CV279650.1|CV279650 WS0132.B21_L13 PTxD-IL-FL-A-4 Populu... 130 2e-034
gb|DT513643.1|DT513643 WS02422.B21_J17 PTxD-ICC-N-A-14 Popu... 97 2e-032
gb|DT512707.1|DT512707 WS02420.B21_A09 PTxD-ICC-N-A-14 Popu... 101 6e-032
gb|BU837200.1|BU837200 T095H09 Populus apical shoot cDNA li... 104 1e-031
gb|CV240642.1|CV240642 WS0251.B21_P03 PT-MB-N-A-15 Populus ... 95 1e-031
gb|DV465400.1|DV465400 MTUNUL1.P39.B04 NUL Populus fremonti... 104 1e-031
gb|BP930563.1|BP930563 BP930563 full-length enriched poplar... 120 2e-031
gb|CV283422.1|CV283422 WS0187.B21_E19 PTxD-IL-N-A-9 Populus... 102 2e-031
gb|CV243768.1|CV243768 WS0252.B21_M19 PT-MB-N-A-15 Populus ... 102 5e-031
gb|DT491072.1|DT491072 WS02546.C21.1_L18 PT-MB-N-A-15 Popul... 102 5e-031
gb|DT505915.1|DT505915 WS01812.C21_D06 PTxD-IL-N-A-9 Populu... 102 5e-031
gb|DT476446.1|DT476446 WS01229.B21_J24 PT-GT-FL-A-3 Populus... 99 1e-030
gb|CF119369.1|CF119369 MTU10CS.P16.H11 Aspen stem cDNA Libr... 98 4e-030
gb|CF119771.1|CF119771 MTU10CS.P6.B05 Aspen stem cDNA Libra... 98 4e-030
gb|CV229269.1|CV229269 WS01912.B21_M05 PT-DX-N-A-10 Populus... 95 5e-030
gb|CX178075.1|CX178075 G12_45-100_14.ab1 leaf inoculated wi... 94 5e-030
gb|CV283775.1|CV283775 WS0188.B21_E01 PTxD-IL-N-A-9 Populus... 115 8e-030
gb|CV277559.1|CV277559 WS0143.B21_O18 PTxD-IL-A-5 Populus t... 115 8e-030
gb|DT518857.1|DT518857 WS02439.B21_H24 PTxD-ICC-N-A-14 Popu... 128 2e-029
gb|DN490532.1|DN490532 UL60PB12.3pR Populus cold stressed l... 98 2e-029
gb|CV254856.1|CV254856 WS02411.B21_G05 PTxD-ICC-N-A-14 Popu... 117 5e-029
gb|DT513869.1|DT513869 WS02423.B21_D17 PTxD-ICC-N-A-14 Popu... 117 5e-029
gb|DT482538.1|DT482538 WS02520.B21_B11 PT-MB-N-A-15 Populus... 112 5e-029
gb|DT476092.1|DT476092 WS01228.B21_E09 PT-GT-FL-A-3 Populus... 106 5e-028
gb|DT476665.1|DT476665 WS01230.B21_F21 PT-GT-FL-A-3 Populus... 106 5e-028
gb|DT504178.1|DT504178 WS01312.B21_F06 PTxD-IL-FL-A-4 Popul... 106 5e-028
gb|CV265766.1|CV265766 WS02028.B21_C18 PTxN-IB-N-A-11 Popul... 106 5e-028
gb|CV280804.1|CV280804 WS0137.B21_M10 PTxD-IL-FL-A-4 Populu... 103 6e-028
gb|CV277009.1|CV277009 WS0142.B21_G13 PTxD-IL-A-5 Populus t... 103 6e-028
gb|CV280613.1|CV280613 WS0137.B21_A16 PTxD-IL-FL-A-4 Populu... 103 6e-028
gb|DT504436.1|DT504436 WS01313.B21_F21 PTxD-IL-FL-A-4 Popul... 103 6e-028
gb|CA933833.1|CA933833 MTU3TS.P13.C08 Aspen stem cDNA Libra... 98 6e-028
gb|BI122064.1|BI122064 I001P93P Populus leaf cDNA library P... 90 7e-028
gb|DT517614.1|DT517614 WS02434.B21_M23 PTxD-ICC-N-A-14 Popu... 108 9e-028
gb|CA927209.1|CA927209 MTU6CR.P6.C10 Aspen root cDNA Librar... 97 1e-027
gb|CV244301.1|CV244301 WS0254.B21_E14 PT-MB-N-A-15 Populus ... 123 1e-027
gb|CV245380.1|CV245380 WS0257.B21_E04 PT-MB-N-A-15 Populus ... 123 1e-027
gb|DT489381.1|DT489381 WS02542.B21_B04 PT-MB-N-A-15 Populus... 123 1e-027
gb|DT492065.1|DT492065 WS02549.C21_J03 PT-MB-N-A-15 Populus... 123 1e-027
gb|CV281059.1|CV281059 WS0138.B21_N13 PTxD-IL-FL-A-4 Populu... 105 1e-027
gb|CV283727.1|CV283727 WS0188.B21_B24 PTxD-IL-N-A-9 Populus... 112 2e-027
gb|CK096689.1|CK096689 UB23CPB11.3pR Populus active cambium... 112 3e-027
gb|DT477027.1|DT477027 WS01231.B21_L09 PT-GT-FL-A-3 Populus... 101 6e-027
gb|CV257201.1|CV257201 WS0245.B21_P10 PTxD-ICC-N-A-14 Popul... 98 4e-026
gb|DT516411.1|DT516411 WS02431.B21_E19 PTxD-ICC-N-A-14 Popu... 98 4e-026
gb|CV255664.1|CV255664 WS02414.B21_K19 PTxD-ICC-N-A-14 Popu... 98 4e-026
gb|CV246116.1|CV246116 WS0111.B21_F15 PT-P-FL-A-2 Populus t... 106 5e-026
gb|CV225916.1|CV225916 WS0162.B21_M05 PT-DX-A-7 Populus tri... 117 6e-026
gb|CK100898.1|CK100898 F007P86.5pR Populus flower cDNA libr... 116 9e-026
gb|CX177292.1|CX177292 G05_69-104_13.ab1 leaf inoculated wi... 94 9e-026
gb|BU891342.1|BU891342 P048H10 Populus petioles cDNA librar... 116 1e-025
gb|CV249527.1|CV249527 WS01124.B21_H12 PT-P-FL-A-2 Populus ... 83 3e-025
gb|DN491399.1|DN491399 UM98TA06.3pR Populus female catkins ... 114 4e-025
gb|AJ774738.1|AJ774738 AJ774738 Populus euphratica shoot 3-... 94 5e-025
gb|CN520132.1|CN520132 GQ0106.B3_K07 GQ010 Populus trichoca... 113 8e-025
gb|CV236341.1|CV236341 WS01223.B21_M04 PT-GT-FL-A-3 Populus... 113 8e-025
gb|CV282585.1|CV282585 WS0185.B21_A14 PTxD-IL-N-A-9 Populus... 113 8e-025
gb|CV280244.1|CV280244 WS0135.B21_I02 PTxD-IL-FL-A-4 Populu... 113 1e-024
gb|CX182229.1|CX182229 D07_45-96_07.ab1 leaf inoculated wit... 112 1e-024
gb|CV243120.1|CV243120 WS02516.B21.1_P07 PT-MB-N-A-15 Popul... 102 2e-024
gb|CK095578.1|CK095578 UA14CPH12.3pR Populus dormant cambiu... 94 2e-024
gb|CF229053.1|CF229053 PtaXM0020F3F0311 Poplar cDNA library... 103 2e-024
gb|CV234524.1|CV234524 WS01215.B21.1_D13 PT-GT-FL-A-3 Popul... 111 5e-024
gb|CK102642.1|CK102642 G085P75.5pR Populus tension wood cDN... 103 6e-024
gb|CV233333.1|CV233333 WS0121.B21_P12 PT-GT-FL-A-3 Populus ... 109 1e-023
gb|CV233345.1|CV233345 WS01210.B21_A08 PT-GT-FL-A-3 Populus... 109 1e-023
gb|CV235889.1|CV235889 WS01221.B21_P24 PT-GT-FL-A-3 Populus... 109 1e-023
gb|CV236193.1|CV236193 WS01223.B21_D08 PT-GT-FL-A-3 Populus... 109 1e-023
gb|BP930169.1|BP930169 BP930169 full-length enriched poplar... 109 1e-023
gb|DT476162.1|DT476162 WS01228.B21_I22 PT-GT-FL-A-3 Populus... 109 1e-023
gb|BP930106.1|BP930106 BP930106 full-length enriched poplar... 85 1e-023
gb|CV267405.1|CV267405 WS02031.B21_K13 PTxN-IB-N-A-11 Popul... 109 2e-023
gb|BP933703.1|BP933703 BP933703 full-length enriched poplar... 85 2e-023
gb|BP936766.1|BP936766 BP936766 full-length enriched poplar... 108 3e-023
gb|CK093949.1|CK093949 I006P43.3pR Populus senescing leaves... 96 4e-023
gb|DN500518.1|DN500518 UL60PB12.5pR Populus cold stressed l... 98 5e-023
gb|CK094584.1|CK094584 I042P76.3pR Populus senescing leaves... 107 7e-023
gb|CV240262.1|CV240262 WS0234.B21_O12 PT-MB-A-13 Populus tr... 107 7e-023
gb|CV264975.1|CV264975 WS02025.B21_P23 PTxN-IB-N-A-11 Popul... 107 7e-023
gb|DT469681.1|DT469681 WS01918.C21_J01 PT-DX-N-A-10 Populus... 107 7e-023
gb|CV265063.1|CV265063 WS02026.B21_D16 PTxN-IB-N-A-11 Popul... 76 7e-023
gb|CV266938.1|CV266938 WS02030.B21_G03 PTxN-IB-N-A-11 Popul... 76 7e-023
gb|CV241011.1|CV241011 WS02510.B21_P15 PT-MB-N-A-15 Populus... 102 7e-023
gb|CX172393.1|CX172393 D04_69-43_08.ab1 leaf inoculated wit... 89 9e-023
gb|DN491184.1|DN491184 UM70TE04.3pR Populus female catkins ... 106 9e-023
gb|CV244020.1|CV244020 WS0253.B21_I02 PT-MB-N-A-15 Populus ... 81 1e-022
gb|BP935319.1|BP935319 BP935319 full-length enriched poplar... 94 1e-022
gb|CF119013.1|CF119013 MTU10CS.P12.D05 Aspen stem cDNA Libr... 106 1e-022
gb|CK091692.1|CK091692 F118P83.3pR Populus flower cDNA libr... 97 2e-022
gb|CV242828.1|CV242828 WS02516.B21.1_C09 PT-MB-N-A-15 Popul... 89 2e-022
gb|DT492006.1|DT492006 WS02549.C21_G15 PT-MB-N-A-15 Populus... 74 2e-022
gb|CF119195.1|CF119195 MTU10CS.P14.F09 Aspen stem cDNA Libr... 99 2e-022
gb|BP935830.1|BP935830 BP935830 full-length enriched poplar... 105 3e-022
gb|CV282786.1|CV282786 WS0185.B21_J13 PTxD-IL-N-A-9 Populus... 79 4e-022
gb|BI071939.1|BI071939 C066P40U Populus strain T89 leaves P... 104 4e-022
gb|DT505087.1|DT505087 WS01315.B21_P21 PTxD-IL-FL-A-4 Popul... 95 6e-022
gb|BP931106.1|BP931106 BP931106 full-length enriched poplar... 94 6e-022
gb|BP932015.1|BP932015 BP932015 full-length enriched poplar... 94 6e-022
gb|AJ767454.1|AJ767454 AJ767454 Populus euphratica leaf adu... 104 6e-022
gb|DT485768.1|DT485768 WS02529.B21_B22 PT-MB-N-A-15 Populus... 72 7e-022
gb|DT480509.1|DT480509 WS02529.BR_B22 PT-MB-N-A-15 Populus ... 72 7e-022
gb|CK091588.1|CK091588 F109P71.3pR Populus flower cDNA libr... 103 8e-022
gb|CK091254.1|CK091254 F066P42.3pR Populus flower cDNA libr... 93 1e-021
gb|CX175426.1|CX175426 G03_69-48_13.ab1 leaf inoculated wit... 100 1e-021
gb|BP930345.1|BP930345 BP930345 full-length enriched poplar... 58 1e-021
gb|DT504306.1|DT504306 WS01312.B21_N15 PTxD-IL-FL-A-4 Popul... 86 2e-021
gb|BU864912.1|BU864912 S046E08 Populus imbibed seed cDNA li... 102 2e-021
gb|CN520702.1|CN520702 GQ0105.B3_G16 GQ010 Populus trichoca... 102 2e-021
gb|CV240216.1|CV240216 WS0234.B21_M06 PT-MB-A-13 Populus tr... 102 2e-021
gb|DN492164.1|DN492164 V051F01.3pR Populus male catkins cDN... 102 2e-021
gb|DT486941.1|DT486941 WS02532.B21_F17 PT-MB-N-A-15 Populus... 102 2e-021
gb|CV264739.1|CV264739 WS02025.B21_F12 PTxN-IB-N-A-11 Popul... 96 2e-021
gb|BP934618.1|BP934618 BP934618 full-length enriched poplar... 101 2e-021
gb|CK089832.1|CK089832 C037P07.3pR Populus strain T89 leave... 101 3e-021
gb|CK110405.1|CK110405 N056F06 Populus bark cDNA library Po... 101 3e-021
gb|CV255934.1|CV255934 WS0242.B21_H10 PTxD-ICC-N-A-14 Popul... 89 5e-021
gb|DN488894.1|DN488894 S050D08.3pR Populus imbibed seed cDN... 95 5e-021
gb|AJ772854.1|AJ772854 AJ772854 Populus euphratica leaf 3-6... 94 1e-020
>gb|DT488152.1|DT488152 WS02535.B21_K09 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02535_K09 3', mRNA sequence
Length = 891
Score = 199 bits (428), Expect = 2e-050
Identities = 77/161 (47%), Positives = 107/161 (66%)
Frame = +2 / -3
Query: 5 ELGNGLYNSGKPFIWVVRSNEEHKLSNELRDKCKERGLIVSWCPQLEVLAHKATGCFFTH 184
EL GL NS F+WV+R + + L + E+G +V W PQ+ +LA++A GCF TH
Sbjct: 814 ELSWGLKNSNYYFLWVIRESGQINLPKTFLEDLGEKGCVVGWSPQVRMLANEAVGCFLTH 635
Query: 185 CGWNSTLEAIVNGVPMAAIPHWADQPTISKYMESMWGLGVRVRKDEKGLVTRDEVERCIK 364
CGWNST+EA+ G+PM A+P W DQP +K +E +W +G+RV DEKG+V RDE+E CIK
Sbjct: 634 CGWNSTIEALSLGMPMVAMPQWTDQPPNAKLVEDVWKVGIRVNVDEKGIVPRDEIECCIK 455
Query: 365 DVMDGDSKDKYRKSATMWMQKAKAAMQNGGSSAKNITEFAA 487
+VM+G ++ RK+A W + A A+ GGSS KNI E +
Sbjct: 454 EVMEGAKGEEMRKNAKKWRELAIEAVSEGGSSDKNIDELVS 332
>gb|DT517193.1|DT517193 WS02433.B21_J11 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02433_J11 3', mRNA sequence
Length = 853
Score = 198 bits (427), Expect = 3e-050
Identities = 75/161 (46%), Positives = 109/161 (67%)
Frame = +2 / -3
Query: 5 ELGNGLYNSGKPFIWVVRSNEEHKLSNELRDKCKERGLIVSWCPQLEVLAHKATGCFFTH 184
EL GL NS F+WV+R + + L + E+G +V W PQ+ +LA++A GCF TH
Sbjct: 791 ELSWGLKNSNYYFLWVIRESGQINLPKTFLEDLGEKGCVVGWSPQVRMLANEAVGCFLTH 612
Query: 185 CGWNSTLEAIVNGVPMAAIPHWADQPTISKYMESMWGLGVRVRKDEKGLVTRDEVERCIK 364
CGWNST+EA+ G+PM A+P W DQP +K +E +W +G+RV+ DE+G+V RDE+E CIK
Sbjct: 611 CGWNSTIEALSLGMPMVAMPQWTDQPPNAKLVEDVWKVGIRVKVDEEGIVPRDEIECCIK 432
Query: 365 DVMDGDSKDKYRKSATMWMQKAKAAMQNGGSSAKNITEFAA 487
+VM+G+ ++ +K+A W + A A+ GGSS KNI E +
Sbjct: 431 EVMEGEKGEEMKKTAKKWRELAIEAVSEGGSSDKNIDELVS 309
>gb|DT483477.1|DT483477 WS02522.B21_L06 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02522_L06 3', mRNA sequence
Length = 897
Score = 186 bits (400), Expect(2) = 6e-049
Identities = 71/143 (49%), Positives = 100/143 (69%)
Frame = +2 / -3
Query: 53 VRSNEEHKLSNELRDKCKERGLIVSWCPQLEVLAHKATGCFFTHCGWNSTLEAIVNGVPM 232
V E KL + E G++VSWC QLEVLAH+A GCF THCGWNSTLE + GVPM
Sbjct: 544 VMKESEKKLPTGFLNSVGETGMVVSWCNQLEVLAHQAIGCFVTHCGWNSTLEGLGLGVPM 365
Query: 233 AAIPHWADQPTISKYMESMWGLGVRVRKDEKGLVTRDEVERCIKDVMDGDSKDKYRKSAT 412
+ +DQP +K++E +W +GVR +KDE G+VTR+E+E+CI+ VMDG++ ++ +++A
Sbjct: 364 VCVTERSDQPMNAKFVEDVWKVGVRAKKDEVGIVTREELEKCIRGVMDGENGEEIKRNAN 185
Query: 413 MWMQKAKAAMQNGGSSAKNITEF 481
W + A++A+ GGSS NI EF
Sbjct: 184 KWRELARSAVSVGGSSDMNINEF 116
Score = 28.1 bits (55), Expect(2) = 6e-049
Identities = 9/22 (40%), Positives = 16/22 (72%)
Frame = +2 / -3
Query: 5 ELGNGLYNSGKPFIWVVRSNEE 70
E+ GL S +PF+WV++ +E+
Sbjct: 589 EIAWGLKASNRPFLWVMKESEK 524
>gb|DN485267.1|DN485267 M123B10.3pR Populus female catkins cDNA library Populus trichocarpa
cDNA clone M123B10 3', mRNA sequence
Length = 785
Score = 186 bits (400), Expect(2) = 6e-049
Identities = 71/143 (49%), Positives = 100/143 (69%)
Frame = +2 / -3
Query: 53 VRSNEEHKLSNELRDKCKERGLIVSWCPQLEVLAHKATGCFFTHCGWNSTLEAIVNGVPM 232
V E KL + E G++VSWC QLEVLAH+A GCF THCGWNSTLE + GVPM
Sbjct: 510 VMKESEKKLPTGFLNSVGETGMVVSWCNQLEVLAHQAIGCFVTHCGWNSTLEGLGLGVPM 331
Query: 233 AAIPHWADQPTISKYMESMWGLGVRVRKDEKGLVTRDEVERCIKDVMDGDSKDKYRKSAT 412
+ +DQP +K++E +W +GVR +KDE G+VTR+E+E+CI+ VMDG++ ++ +++A
Sbjct: 330 VCVTERSDQPMNAKFVEDVWKVGVRAKKDEVGIVTREELEKCIRGVMDGENGEEIKRNAN 151
Query: 413 MWMQKAKAAMQNGGSSAKNITEF 481
W + A++A+ GGSS NI EF
Sbjct: 150 KWRELARSAVSVGGSSDMNINEF 82
Score = 28.1 bits (55), Expect(2) = 6e-049
Identities = 9/22 (40%), Positives = 16/22 (72%)
Frame = +2 / -3
Query: 5 ELGNGLYNSGKPFIWVVRSNEE 70
E+ GL S +PF+WV++ +E+
Sbjct: 555 EIAWGLKASNRPFLWVMKESEK 490
>gb|CV239371.1|CV239371 WS0232.B21_D04 PT-MB-A-13 Populus trichocarpa cDNA clone WS0232_D04
3', mRNA sequence
Length = 768
Score = 186 bits (400), Expect(2) = 6e-049
Identities = 71/143 (49%), Positives = 100/143 (69%)
Frame = +2 / -2
Query: 53 VRSNEEHKLSNELRDKCKERGLIVSWCPQLEVLAHKATGCFFTHCGWNSTLEAIVNGVPM 232
V E KL + E G++VSWC QLEVLAH+A GCF THCGWNSTLE + GVPM
Sbjct: 545 VMKESEKKLPTGFLNSVGETGMVVSWCNQLEVLAHQAIGCFVTHCGWNSTLEGLGLGVPM 366
Query: 233 AAIPHWADQPTISKYMESMWGLGVRVRKDEKGLVTRDEVERCIKDVMDGDSKDKYRKSAT 412
+ +DQP +K++E +W +GVR +KDE G+VTR+E+E+CI+ VMDG++ ++ +++A
Sbjct: 365 VCVTERSDQPMNAKFVEDVWKVGVRAKKDEVGIVTREELEKCIRGVMDGENGEEIKRNAN 186
Query: 413 MWMQKAKAAMQNGGSSAKNITEF 481
W + A++A+ GGSS NI EF
Sbjct: 185 KWRELARSAVSVGGSSDMNINEF 117
Score = 28.1 bits (55), Expect(2) = 6e-049
Identities = 9/22 (40%), Positives = 16/22 (72%)
Frame = +2 / -2
Query: 5 ELGNGLYNSGKPFIWVVRSNEE 70
E+ GL S +PF+WV++ +E+
Sbjct: 590 EIAWGLKASNRPFLWVMKESEK 525
>gb|CA923539.1|CA923539 MTU7CL.P11.G02 Aspen leaf cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 706
Score = 185 bits (399), Expect(2) = 9e-049
Identities = 71/143 (49%), Positives = 99/143 (69%)
Frame = +2 / -2
Query: 53 VRSNEEHKLSNELRDKCKERGLIVSWCPQLEVLAHKATGCFFTHCGWNSTLEAIVNGVPM 232
V E KL + E G++VSWC QLEVLAH+A GCF THCGWNSTLE + GVPM
Sbjct: 531 VLKESEKKLPTGFLNSVGETGMVVSWCNQLEVLAHQAIGCFVTHCGWNSTLEGLGLGVPM 352
Query: 233 AAIPHWADQPTISKYMESMWGLGVRVRKDEKGLVTRDEVERCIKDVMDGDSKDKYRKSAT 412
+ ADQP +K++E +W +GVR +KDE G+VTR+E+E+CI+ MDG+S ++ +++A
Sbjct: 351 VCVTERADQPMNAKFVEDVWKVGVRTKKDEVGIVTREELEKCIRGAMDGESGEEIKRNAN 172
Query: 413 MWMQKAKAAMQNGGSSAKNITEF 481
W + A++A+ GG+S NI EF
Sbjct: 171 KWRELARSAVSAGGTSDMNINEF 103
Score = 101 bits (215), Expect = 4e-021
Identities = 51/123 (41%), Positives = 61/123 (49%)
Frame = -3 / +2
Query: 489 FAANSVIFLAELPPFCIAALAFCIHIVALFXXXXXXXXXXXXXXXXXXXXLVTKPFSSLR 310
F NS+IF++E+PP A LA +H++A LVT P SS
Sbjct: 95 FTTNSLIFISEVPPALTALLASSLHLLAFLLISSPLSPSMAPLMHFSSSSLVTIPTSSFL 274
Query: 309 TRTPKPHMLSIYFDMVGWSAQCGIAAIGTPLTIASNVEFHPQCVKKQPVALCARTSSWGH 130
TP H S +GWSA IGTP SNVEFHPQCV KQP+A A TSS H
Sbjct: 275 VLTPTFHTSSTNLAFIGWSALSVTHTIGTPRPSPSNVEFHPQCVTKQPIAW*ASTSS*LH 454
Query: 129 QET 121
+T
Sbjct: 455 HDT 463
Score = 28.1 bits (55), Expect(2) = 9e-049
Identities = 9/22 (40%), Positives = 16/22 (72%)
Frame = +2 / -2
Query: 5 ELGNGLYNSGKPFIWVVRSNEE 70
E+ GL S +PF+WV++ +E+
Sbjct: 576 EIAWGLKASNRPFLWVLKESEK 511
>gb|DN488227.1|DN488227 R042F04.3pR Populus root cDNA library Populus tremula x Populus
tremuloides cDNA clone R042F04 3', mRNA sequence
Length = 765
Score = 188 bits (405), Expect = 3e-047
Identities = 73/161 (45%), Positives = 105/161 (65%)
Frame = +2 / -3
Query: 5 ELGNGLYNSGKPFIWVVRSNEEHKLSNELRDKCKERGLIVSWCPQLEVLAHKATGCFFTH 184
E+ GL S PF+WVV +E+ K+ ++ + +GL+V+W PQ++VLA+K GCFFTH
Sbjct: 715 EIAWGLKRSNFPFLWVVMDSEKGKIPEGFVEEVENKGLVVNWSPQVKVLANKVVGCFFTH 536
Query: 185 CGWNSTLEAIVNGVPMAAIPHWADQPTISKYMESMWGLGVRVRKDEKGLVTRDEVERCIK 364
CGWNST+EA+ GVPM +P W+DQ T SK +E W +GVR + DE G+V R+E+ CIK
Sbjct: 535 CGWNSTIEALSLGVPMVTMPGWSDQQTNSKLVEDAWKVGVRAKVDEHGIVKREEIAICIK 356
Query: 365 DVMDGDSKDKYRKSATMWMQKAKAAMQNGGSSAKNITEFAA 487
+VM+GD + + ++ W + A A GG+S NI A
Sbjct: 355 EVMEGDRGREMKMNSKKWKELAIEATSEGGTSDTNINVLVA 233
>gb|DT483393.1|DT483393 WS02522.B21_H12 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02522_H12 3', mRNA sequence
Length = 887
Score = 187 bits (403), Expect = 5e-047
Identities = 73/161 (45%), Positives = 106/161 (65%)
Frame = +2 / -1
Query: 5 ELGNGLYNSGKPFIWVVRSNEEHKLSNELRDKCKERGLIVSWCPQLEVLAHKATGCFFTH 184
E+ GL S F+WVV +E+ K+ ++ + +GL+V+W PQ++VLA++A GCFFTH
Sbjct: 650 EIAWGLKRSNFHFLWVVMDSEKGKIPEGFVEEVENKGLVVNWSPQVKVLANEAVGCFFTH 471
Query: 185 CGWNSTLEAIVNGVPMAAIPHWADQPTISKYMESMWGLGVRVRKDEKGLVTRDEVERCIK 364
CGWNST+EA+ GVPM +P W+DQ T SK +E W +GVR + DE G+V R+E+ CIK
Sbjct: 470 CGWNSTIEALSLGVPMVTMPGWSDQQTNSKLVEDAWKVGVRAKVDEHGIVKREEIAICIK 291
Query: 365 DVMDGDSKDKYRKSATMWMQKAKAAMQNGGSSAKNITEFAA 487
+VM+GD + + ++ W + A A GG+S NI E A
Sbjct: 290 EVMEGDRGREMKMNSKKWKELAIEAASEGGTSDTNINELVA 168
>gb|CX658054.1|CX658054 PO01008G05 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO01008G05 5', mRNA sequence
Length = 575
Score = 182 bits (391), Expect = 2e-045
Identities = 67/125 (53%), Positives = 94/125 (75%)
Frame = +2 / +3
Query: 107 ERGLIVSWCPQLEVLAHKATGCFFTHCGWNSTLEAIVNGVPMAAIPHWADQPTISKYMES 286
E G++VSWC QLEVLAH+A GCF THCGWNSTLE + GVPM + ADQP +K++E
Sbjct: 6 ETGMVVSWCNQLEVLAHQAIGCFVTHCGWNSTLEGLGLGVPMVCVTERADQPMNAKFVED 185
Query: 287 MWGLGVRVRKDEKGLVTRDEVERCIKDVMDGDSKDKYRKSATMWMQKAKAAMQNGGSSAK 466
+W +GVR +KDE G+VTR+E+E+CI+ MDG+S ++ +++A W + A++A+ GG+S
Sbjct: 186 VWKVGVRTKKDEAGIVTREELEKCIRGAMDGESGEEIKRNANRWRELARSAVSVGGTSDM 365
Query: 467 NITEF 481
NI EF
Sbjct: 366 NINEF 380
>gb|CV257070.1|CV257070 WS0245.B21_J10 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS0245_J10 3', mRNA sequence
Length = 809
Score = 181 bits (390), Expect = 3e-045
Identities = 71/161 (44%), Positives = 105/161 (65%)
Frame = +2 / -1
Query: 5 ELGNGLYNSGKPFIWVVRSNEEHKLSNELRDKCKERGLIVSWCPQLEVLAHKATGCFFTH 184
E+ GL S F+WVV +E+ K+ ++ + +GL+V+W PQ++VLA++A CFFTH
Sbjct: 608 EIAWGLKRSNFHFLWVVMDSEKGKIPEGFVEEVENKGLVVNWSPQVKVLANEAVRCFFTH 429
Query: 185 CGWNSTLEAIVNGVPMAAIPHWADQPTISKYMESMWGLGVRVRKDEKGLVTRDEVERCIK 364
CGWNST+EA+ GVPM +P W+DQ T SK +E W +GVR + DE G+V R+E+ CIK
Sbjct: 428 CGWNSTIEALSLGVPMVTMPGWSDQQTNSKLVEDAWKVGVRAKVDEHGIVKREEIAICIK 249
Query: 365 DVMDGDSKDKYRKSATMWMQKAKAAMQNGGSSAKNITEFAA 487
+VM+G+ + + ++ W + A A GG+S NI E A
Sbjct: 248 EVMEGNRGREMKMNSKKWKELAIEATSEGGTSDTNINELVA 126
>gb|DN491046.1|DN491046 UM56TC12.3pR Populus female catkins cDNA library Populus
trichocarpa cDNA clone UM56TC12 3', mRNA sequence
Length = 726
Score = 177 bits (380), Expect = 8e-044
Identities = 63/124 (50%), Positives = 92/124 (74%)
Frame = +2 / -1
Query: 107 ERGLIVSWCPQLEVLAHKATGCFFTHCGWNSTLEAIVNGVPMAAIPHWADQPTISKYMES 286
E+G +V W PQ+ +LA++A GCF THCGWNST+EA+ G+PM A+P W DQP +K +E
Sbjct: 630 EKGCVVGWSPQVRMLANEAVGCFLTHCGWNSTIEALSLGMPMVAMPQWTDQPPNAKLVED 451
Query: 287 MWGLGVRVRKDEKGLVTRDEVERCIKDVMDGDSKDKYRKSATMWMQKAKAAMQNGGSSAK 466
+W +G+RV+ DE+G+V RDE+E C+K+VM+G+ ++ +K+A W + A A+ GGSS K
Sbjct: 450 VWKVGIRVKVDEEGIVPRDEIECCVKEVMEGEKGEEMKKNAKKWRELAIEAVSEGGSSDK 271
Query: 467 NITE 478
NI E
Sbjct: 270 NIDE 259
>gb|CV243415.1|CV243415 WS02518.B21_N01 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02518_N01 3', mRNA sequence
Length = 912
Score = 134 bits (288), Expect(2) = 1e-036
Identities = 51/103 (49%), Positives = 74/103 (71%)
Frame = +2 / -1
Query: 65 EEHKLSNELRDKCKERGLIVSWCPQLEVLAHKATGCFFTHCGWNSTLEAIVNGVPMAAIP 244
E+ +LS +++G++V WC Q+EVL+H + GCF THCGWNSTLE++V+GVP+ A P
Sbjct: 579 EDDQLSACREAILEKQGMVVPWCCQVEVLSHPSIGCFVTHCGWNSTLESLVSGVPVVAFP 400
Query: 245 HWADQPTISKYMESMWGLGVRVRKDEKGLVTRDEVERCIKDVM 373
HW DQ T +K +E +W GVRV +E+G+V DE++R + VM
Sbjct: 399 HWTDQGTNAKLIEDVWKTGVRVVANEEGIVEGDEIKRSLDLVM 271
Score = 38.2 bits (77), Expect(2) = 1e-036
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = +2 / -1
Query: 374 DGDSKDKYRKSATMWMQKAKAAMQNGGSSAKNITEF 481
DG + + +RK+A W A A+++GGSS KN+ F
Sbjct: 267 DGKTGEDFRKNAKKWKDLALDAVKDGGSSDKNLKAF 160
>gb|DN488765.1|DN488765 S031D05.3pR Populus imbibed seed cDNA library Populus tremula cDNA
clone S031D05 3', mRNA sequence
Length = 705
Score = 134 bits (288), Expect(2) = 3e-036
Identities = 51/103 (49%), Positives = 74/103 (71%)
Frame = +2 / -1
Query: 65 EEHKLSNELRDKCKERGLIVSWCPQLEVLAHKATGCFFTHCGWNSTLEAIVNGVPMAAIP 244
E+ +LS +++G++V WC Q+EVL+H + GCF THCGWNSTLE++V+GVP+ A P
Sbjct: 588 EDDQLSACREAILEKQGMVVPWCCQVEVLSHPSIGCFVTHCGWNSTLESLVSGVPVVAFP 409
Query: 245 HWADQPTISKYMESMWGLGVRVRKDEKGLVTRDEVERCIKDVM 373
HW DQ T +K +E +W GVRV +E+G+V DE++R + VM
Sbjct: 408 HWTDQGTNAKLIEDVWKTGVRVVANEEGIVEGDEIKRSLDLVM 280
Score = 36.8 bits (74), Expect(2) = 3e-036
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = +2 / -1
Query: 374 DGDSKDKYRKSATMWMQKAKAAMQNGGSSAKNITEF 481
DG + + RK+A W A A+++GGSS KN+ F
Sbjct: 276 DGKTGEDLRKNAKKWKDLAMDAVKDGGSSDKNLKAF 169
>gb|DT504462.1|DT504462 WS01313.B21_H10 PTxD-IL-FL-A-4 Populus trichocarpa x Populus
deltoides cDNA clone WS01313_H10 3', mRNA sequence
Length = 903
Score = 130 bits (279), Expect(2) = 2e-034
Identities = 48/90 (53%), Positives = 66/90 (73%)
Frame = +2 / -3
Query: 104 KERGLIVSWCPQLEVLAHKATGCFFTHCGWNSTLEAIVNGVPMAAIPHWADQPTISKYME 283
+ +G+IV WC Q+EVL+H + GCF THCGWNSTLE++V VP+ A PHW DQ T +K +
Sbjct: 619 ERQGMIVPWCCQVEVLSHPSIGCFVTHCGWNSTLESLVCEVPVVAFPHWTDQGTNAKLIA 440
Query: 284 SMWGLGVRVRKDEKGLVTRDEVERCIKDVM 373
+W GVRV +E+G+V DE++RC+ VM
Sbjct: 439 DVWKTGVRVVANEEGIVEGDEIKRCLDLVM 350
Score = 35.0 bits (70), Expect(2) = 2e-034
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +2 / -3
Query: 377 GDSKDKYRKSATMWMQKAKAAMQNGGSSAKNITEF 481
G + + RK+A W A+ A++ GGSS KN+ F
Sbjct: 343 GKTGEDIRKNAKKWKDLARDAVKEGGSSDKNLKAF 239
>gb|DV466266.1|DV466266 MTUNUL1.P49.D07 NUL Populus fremontii x Populus angustifolia cDNA,
mRNA sequence
Length = 840
Score = 134 bits (287), Expect(2) = 2e-034
Identities = 50/103 (48%), Positives = 74/103 (71%)
Frame = +2 / +1
Query: 65 EEHKLSNELRDKCKERGLIVSWCPQLEVLAHKATGCFFTHCGWNSTLEAIVNGVPMAAIP 244
E+ +LS +++G++V WC Q+EVL+H + GCF THCGWNSTLE++V+G+P+ A P
Sbjct: 439 EDDQLSACREAILEKQGMVVPWCCQVEVLSHPSIGCFVTHCGWNSTLESLVSGIPVVAFP 618
Query: 245 HWADQPTISKYMESMWGLGVRVRKDEKGLVTRDEVERCIKDVM 373
HW DQ T +K +E +W GVRV +E+G+V DE++R + VM
Sbjct: 619 HWTDQGTNTKLIEDVWKTGVRVVANEEGIVEGDEIKRSLDLVM 747
Score = 31.3 bits (62), Expect(2) = 2e-034
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +2 / +1
Query: 374 DGDSKDKYRKSATMWMQKAKAAMQNGGSS 460
DG + + +RK+A W A A+++GGSS
Sbjct: 751 DGKTGEDFRKNAKKWKDLALDAVKDGGSS 837
>gb|DT487894.1|DT487894 WS02534.B21_P09 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02534_P09 3', mRNA sequence
Length = 712
Score = 130 bits (279), Expect(2) = 2e-034
Identities = 48/90 (53%), Positives = 66/90 (73%)
Frame = +2 / -3
Query: 104 KERGLIVSWCPQLEVLAHKATGCFFTHCGWNSTLEAIVNGVPMAAIPHWADQPTISKYME 283
+ +G+IV WC Q+EVL+H + GCF THCGWNSTLE++V VP+ A PHW DQ T +K +
Sbjct: 674 ERQGMIVPWCCQVEVLSHPSIGCFVTHCGWNSTLESLVCEVPVVAFPHWTDQGTNAKLIA 495
Query: 284 SMWGLGVRVRKDEKGLVTRDEVERCIKDVM 373
+W GVRV +E+G+V DE++RC+ VM
Sbjct: 494 DVWKTGVRVVANEEGIVEGDEIKRCLDLVM 405
Score = 35.0 bits (70), Expect(2) = 2e-034
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +2 / -3
Query: 377 GDSKDKYRKSATMWMQKAKAAMQNGGSSAKNITEF 481
G + + RK+A W A+ A++ GGSS KN+ F
Sbjct: 398 GKTGEDIRKNAKKWKDLARDAVKEGGSSDKNLKAF 294
>gb|CV279584.1|CV279584 WS0132.B21_G07 PTxD-IL-FL-A-4 Populus trichocarpa x Populus
deltoides cDNA clone WS0132_G07 3', mRNA sequence
Length = 632
Score = 130 bits (279), Expect(2) = 2e-034
Identities = 48/90 (53%), Positives = 66/90 (73%)
Frame = +2 / -3
Query: 104 KERGLIVSWCPQLEVLAHKATGCFFTHCGWNSTLEAIVNGVPMAAIPHWADQPTISKYME 283
+ +G+IV WC Q+EVL+H + GCF THCGWNSTLE++V VP+ A PHW DQ T +K +
Sbjct: 615 ERQGMIVPWCCQVEVLSHPSIGCFVTHCGWNSTLESLVCEVPVVAFPHWTDQGTNAKLIA 436
Query: 284 SMWGLGVRVRKDEKGLVTRDEVERCIKDVM 373
+W GVRV +E+G+V DE++RC+ VM
Sbjct: 435 DVWKTGVRVVANEEGIVEGDEIKRCLDLVM 346
Score = 35.0 bits (70), Expect(2) = 2e-034
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +2 / -3
Query: 377 GDSKDKYRKSATMWMQKAKAAMQNGGSSAKNITEF 481
G + + RK+A W A+ A++ GGSS KN+ F
Sbjct: 339 GKTGEDIRKNAKKWKDLARDAVKEGGSSDKNLKAF 235
>gb|CV279650.1|CV279650 WS0132.B21_L13 PTxD-IL-FL-A-4 Populus trichocarpa x Populus
deltoides cDNA clone WS0132_L13 3', mRNA sequence
Length = 627
Score = 130 bits (279), Expect(2) = 2e-034
Identities = 48/90 (53%), Positives = 66/90 (73%)
Frame = +2 / -1
Query: 104 KERGLIVSWCPQLEVLAHKATGCFFTHCGWNSTLEAIVNGVPMAAIPHWADQPTISKYME 283
+ +G+IV WC Q+EVL+H + GCF THCGWNSTLE++V VP+ A PHW DQ T +K +
Sbjct: 612 ERQGMIVPWCCQVEVLSHPSIGCFVTHCGWNSTLESLVCEVPVVAFPHWTDQGTNAKLIA 433
Query: 284 SMWGLGVRVRKDEKGLVTRDEVERCIKDVM 373
+W GVRV +E+G+V DE++RC+ VM
Sbjct: 432 DVWKTGVRVVANEEGIVEGDEIKRCLDLVM 343
Score = 35.0 bits (70), Expect(2) = 2e-034
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +2 / -1
Query: 377 GDSKDKYRKSATMWMQKAKAAMQNGGSSAKNITEF 481
G + + RK+A W A+ A++ GGSS KN+ F
Sbjct: 336 GKTGEDIRKNAKKWKDLARDAVKEGGSSDKNLKAF 232
>gb|DT513643.1|DT513643 WS02422.B21_J17 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02422_J17 3', mRNA sequence
Length = 777
Score = 97.3 bits (206), Expect(3) = 2e-032
Identities = 37/78 (47%), Positives = 49/78 (62%)
Frame = +2 / -3
Query: 77 LSNELRDKCKERGLIVSWCPQLEVLAHKATGCFFTHCGWNSTLEAIVNGVPMAAIPHWAD 256
L E ++ K+RG I SWCPQ EVL H + G F THCGW S +E+I +GVPM P D
Sbjct: 544 LPPEFTEETKDRGFICSWCPQEEVLNHPSVGGFLTHCGWTSIIESISSGVPMLCWPFAGD 365
Query: 257 QPTISKYMESMWGLGVRV 310
Q T +Y + WG+G+ +
Sbjct: 364 QQTNCRYTCTEWGIGMEI 311
Score = 47.8 bits (98), Expect(3) = 2e-032
Identities = 18/47 (38%), Positives = 31/47 (65%)
Frame = +2 / -3
Query: 332 VTRDEVERCIKDVMDGDSKDKYRKSATMWMQKAKAAMQNGGSSAKNI 472
VTRD+VE+ +++ M+G+ + +K A W + A+ A GGSS+ N+
Sbjct: 301 VTRDKVEKIVREFMEGEKAKEMKKKAMEWKKLAEEATGPGGSSSMNL 161
Score = 31.8 bits (63), Expect(3) = 2e-032
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = +2 / -3
Query: 5 ELGNGLYNSGKPFIWVVR 58
E G GL SG PF+W++R
Sbjct: 628 EFGMGLAKSGHPFLWIIR 575
>gb|DT512707.1|DT512707 WS02420.B21_A09 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02420_A09 3', mRNA sequence
Length = 848
Score = 101 bits (216), Expect(3) = 6e-032
Identities = 40/83 (48%), Positives = 51/83 (61%)
Frame = +2 / -1
Query: 77 LSNELRDKCKERGLIVSWCPQLEVLAHKATGCFFTHCGWNSTLEAIVNGVPMAAIPHWAD 256
L E ++ RGL+ SWCPQ +VLAH + G F THCGWNS +E I GVP+ P +AD
Sbjct: 635 LPEEFLEQIDGRGLLASWCPQDQVLAHPSVGVFLTHCGWNSMMETISCGVPVICWPFFAD 456
Query: 257 QPTISKYMESMWGLGVRVRKDEK 325
Q +Y + WG+GV V D K
Sbjct: 455 QQPNCRYACTKWGIGVEVNHDVK 387
Score = 46.4 bits (95), Expect(3) = 6e-032
Identities = 19/50 (38%), Positives = 31/50 (62%)
Frame = +2 / -1
Query: 332 VTRDEVERCIKDVMDGDSKDKYRKSATMWMQKAKAAMQNGGSSAKNITEF 481
V R+E+E +K++++GDS + R+ A W A+AA GGSS + +F
Sbjct: 392 VKRNEIESLVKEMIEGDSGKQMRQKALEWKDIAEAATNIGGSSYNDFEKF 243
Score = 26.7 bits (52), Expect(3) = 6e-032
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +2 / -1
Query: 5 ELGNGLYNSGKPFIWVVR 58
E GL NS PF+W++R
Sbjct: 719 EFAWGLANSKLPFLWIIR 666
>gb|BU837200.1|BU837200 T095H09 Populus apical shoot cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 718
Score = 104 bits (222), Expect(2) = 1e-031
Identities = 37/71 (52%), Positives = 51/71 (71%)
Frame = +2 / +3
Query: 110 RGLIVSWCPQLEVLAHKATGCFFTHCGWNSTLEAIVNGVPMAAIPHWADQPTISKYMESM 289
RG +V W PQ +VLAH + CF THCGWNST+EA+ +G+P+AA P W DQ T +KY+ +
Sbjct: 51 RGRVVQWSPQEKVLAHPSVACFVTHCGWNSTMEALTSGMPVAAFPQWGDQVTNAKYLVDI 230
Query: 290 WGLGVRVRKDE 322
+GVR+ + E
Sbjct: 231 LKVGVRMSRGE 263
Score = 51.9 bits (107), Expect(2) = 1e-031
Identities = 21/54 (38%), Positives = 32/54 (59%)
Frame = +2 / +3
Query: 320 EKGLVTRDEVERCIKDVMDGDSKDKYRKSATMWMQKAKAAMQNGGSSAKNITEF 481
E L+TRDE+E+C+ + G + ++ A W + A+AA+ GGSS NI F
Sbjct: 267 ENKLITRDEIEKCLLEATAGPKAVEMKEKAMKWKEAAEAAVAEGGSSDWNIRYF 428
>gb|CV240642.1|CV240642 WS0251.B21_P03 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS0251_P03 3', mRNA sequence
Length = 845
Score = 94.5 bits (200), Expect(3) = 1e-031
Identities = 36/78 (46%), Positives = 49/78 (62%)
Frame = +2 / -2
Query: 77 LSNELRDKCKERGLIVSWCPQLEVLAHKATGCFFTHCGWNSTLEAIVNGVPMAAIPHWAD 256
L E ++ K+R I SWCPQ EVL H + G F THCGW ST+E+I +GVPM P + D
Sbjct: 646 LPPEFTEETKDRCFISSWCPQEEVLDHPSVGGFLTHCGWGSTIESISSGVPMLCWPSFGD 467
Query: 257 QPTISKYMESMWGLGVRV 310
Q T +Y + W +G+ +
Sbjct: 466 QQTNCRYACNEWAIGMEI 413
Score = 46.9 bits (96), Expect(3) = 1e-031
Identities = 18/47 (38%), Positives = 31/47 (65%)
Frame = +2 / -2
Query: 332 VTRDEVERCIKDVMDGDSKDKYRKSATMWMQKAKAAMQNGGSSAKNI 472
VTR+ VE+ ++++M+G+ K +K A W + A+ A GGSS+ N+
Sbjct: 403 VTRENVEKQVRELMEGEEGKKMKKKAMEWKKLAEEATGPGGSSSMNL 263
Score = 32.7 bits (65), Expect(3) = 1e-031
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = +2 / -2
Query: 5 ELGNGLYNSGKPFIWVVR 58
E G GL SG PF+W++R
Sbjct: 730 EFGTGLAKSGHPFLWIIR 677
>gb|DV465400.1|DV465400 MTUNUL1.P39.B04 NUL Populus fremontii x Populus angustifolia cDNA,
mRNA sequence
Length = 903
Score = 104 bits (221), Expect(2) = 1e-031
Identities = 36/76 (47%), Positives = 53/76 (69%)
Frame = +2 / +2
Query: 95 DKCKERGLIVSWCPQLEVLAHKATGCFFTHCGWNSTLEAIVNGVPMAAIPHWADQPTISK 274
+K +RG +V W PQ +VLAH + CF THCGWNS++EA+ +G+P+ A P W DQ T +K
Sbjct: 506 EKAGDRGKVVQWSPQEKVLAHPSVACFVTHCGWNSSMEALTSGMPVVAFPQWGDQVTNAK 685
Query: 275 YMESMWGLGVRVRKDE 322
Y+ + +GVR+ + E
Sbjct: 686 YLVDILKVGVRMSRGE 733
Score = 51.9 bits (107), Expect(2) = 1e-031
Identities = 21/54 (38%), Positives = 32/54 (59%)
Frame = +2 / +2
Query: 320 EKGLVTRDEVERCIKDVMDGDSKDKYRKSATMWMQKAKAAMQNGGSSAKNITEF 481
E L+TRDE+E+C+ + G + +++A W + A AA+ GGSS NI F
Sbjct: 737 ENKLITRDEIEKCLLEATVGPKAVEMKQNAMKWKEAAAAAVAEGGSSDWNIRSF 898
>gb|BP930563.1|BP930563 BP930563 full-length enriched poplar cDNA library Populus nigra
cDNA clone PnFL1-011_M09.r 3', mRNA sequence
Length = 598
Score = 120 bits (257), Expect(2) = 2e-031
Identities = 44/82 (53%), Positives = 59/82 (71%)
Frame = +2 / -2
Query: 128 WCPQLEVLAHKATGCFFTHCGWNSTLEAIVNGVPMAAIPHWADQPTISKYMESMWGLGVR 307
WC Q+E L+H + GCF THCGWNSTLE++V VP+ A PHW DQ T +K + +W GVR
Sbjct: 597 WCCQVEFLSHPSIGCFVTHCGWNSTLESLVCEVPVVAFPHWTDQGTNAKLIADVWKTGVR 418
Query: 308 VRKDEKGLVTRDEVERCIKDVM 373
V +E+G+V DE++RC+ VM
Sbjct: 417 VVANEEGIVEGDEIKRCLDLVM 352
Score = 35.0 bits (70), Expect(2) = 2e-031
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +2 / -2
Query: 377 GDSKDKYRKSATMWMQKAKAAMQNGGSSAKNITEF 481
G + + RK+A W A+ A++ GGSS KN+ F
Sbjct: 345 GKTGEDIRKNAKKWKDLARDAVREGGSSDKNLKAF 241
>gb|CV283422.1|CV283422 WS0187.B21_E19 PTxD-IL-N-A-9 Populus trichocarpa x Populus
deltoides cDNA clone WS0187_E19 3', mRNA sequence
Length = 783
Score = 102 bits (217), Expect(2) = 2e-031
Identities = 35/76 (46%), Positives = 52/76 (68%)
Frame = +2 / -3
Query: 95 DKCKERGLIVSWCPQLEVLAHKATGCFFTHCGWNSTLEAIVNGVPMAAIPHWADQPTISK 274
+K +RG +V W PQ +VL H + CF THCGWNS++EA+ +G+P+ A P W DQ T +K
Sbjct: 715 EKAGDRGRVVQWSPQEKVLTHPSVACFVTHCGWNSSMEALTSGMPVVAFPQWGDQVTNAK 536
Query: 275 YMESMWGLGVRVRKDE 322
Y+ + +GVR+ + E
Sbjct: 535 YLVDILKVGVRMSRGE 488
Score = 52.8 bits (109), Expect(2) = 2e-031
Identities = 21/55 (38%), Positives = 33/55 (60%)
Frame = +2 / -3
Query: 320 EKGLVTRDEVERCIKDVMDGDSKDKYRKSATMWMQKAKAAMQNGGSSAKNITEFA 484
E L+TRDE+E+C+ + G + +++A W + A AA+ GGSS NI F+
Sbjct: 484 ENKLITRDEIEKCLLEAAVGPKAVEMKQNAMKWKEAAAAAVAEGGSSDLNIRSFS 320
>gb|CV243768.1|CV243768 WS0252.B21_M19 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS0252_M19 3', mRNA sequence
Length = 908
Score = 102 bits (217), Expect(2) = 5e-031
Identities = 35/76 (46%), Positives = 52/76 (68%)
Frame = +2 / -1
Query: 95 DKCKERGLIVSWCPQLEVLAHKATGCFFTHCGWNSTLEAIVNGVPMAAIPHWADQPTISK 274
+K +RG +V W PQ +VL H + CF THCGWNS++EA+ +G+P+ A P W DQ T +K
Sbjct: 755 EKAGDRGKVVQWSPQEKVLTHPSVACFVTHCGWNSSMEALTSGMPVVAFPQWGDQVTNAK 576
Query: 275 YMESMWGLGVRVRKDE 322
Y+ + +GVR+ + E
Sbjct: 575 YLVDILKVGVRMSRGE 528
Score = 51.9 bits (107), Expect(2) = 5e-031
Identities = 21/54 (38%), Positives = 32/54 (59%)
Frame = +2 / -1
Query: 320 EKGLVTRDEVERCIKDVMDGDSKDKYRKSATMWMQKAKAAMQNGGSSAKNITEF 481
E L+TRDE+E+C+ + G + +++A W + A AA+ GGSS NI F
Sbjct: 524 ENKLITRDEIEKCLLEATVGPKAVEMKQNAMKWKEAAAAAVAEGGSSDWNIRSF 363
>gb|DT491072.1|DT491072 WS02546.C21.1_L18 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02546_L18 3', mRNA sequence
Length = 882
Score = 102 bits (217), Expect(2) = 5e-031
Identities = 35/76 (46%), Positives = 52/76 (68%)
Frame = +2 / -1
Query: 95 DKCKERGLIVSWCPQLEVLAHKATGCFFTHCGWNSTLEAIVNGVPMAAIPHWADQPTISK 274
+K +RG +V W PQ +VL H + CF THCGWNS++EA+ +G+P+ A P W DQ T +K
Sbjct: 762 EKAGDRGKVVQWSPQEKVLTHPSVACFVTHCGWNSSMEALTSGMPVVAFPQWGDQVTNAK 583
Query: 275 YMESMWGLGVRVRKDE 322
Y+ + +GVR+ + E
Sbjct: 582 YLVDILKVGVRMSRGE 535
Score = 51.9 bits (107), Expect(2) = 5e-031
Identities = 21/54 (38%), Positives = 32/54 (59%)
Frame = +2 / -1
Query: 320 EKGLVTRDEVERCIKDVMDGDSKDKYRKSATMWMQKAKAAMQNGGSSAKNITEF 481
E L+TRDE+E+C+ + G + +++A W + A AA+ GGSS NI F
Sbjct: 531 ENKLITRDEIEKCLLEATVGPKAVEMKQNAMKWKEAAAAAVAEGGSSDWNIRSF 370
>gb|DT505915.1|DT505915 WS01812.C21_D06 PTxD-IL-N-A-9 Populus trichocarpa x Populus
deltoides cDNA clone WS01812_D06 3', mRNA sequence
Length = 867
Score = 102 bits (217), Expect(2) = 5e-031
Identities = 35/76 (46%), Positives = 52/76 (68%)
Frame = +2 / -3
Query: 95 DKCKERGLIVSWCPQLEVLAHKATGCFFTHCGWNSTLEAIVNGVPMAAIPHWADQPTISK 274
+K +RG +V W PQ +VL H + CF THCGWNS++EA+ +G+P+ A P W DQ T +K
Sbjct: 709 EKAGDRGKVVQWSPQEKVLTHPSVACFVTHCGWNSSMEALTSGMPVVAFPQWGDQVTNAK 530
Query: 275 YMESMWGLGVRVRKDE 322
Y+ + +GVR+ + E
Sbjct: 529 YLVDILKVGVRMSRGE 482
Score = 51.9 bits (107), Expect(2) = 5e-031
Identities = 21/54 (38%), Positives = 32/54 (59%)
Frame = +2 / -3
Query: 320 EKGLVTRDEVERCIKDVMDGDSKDKYRKSATMWMQKAKAAMQNGGSSAKNITEF 481
E L+TRDE+E+C+ + G + +++A W + A AA+ GGSS NI F
Sbjct: 478 ENKLITRDEIEKCLLEATVGPKAVEMKQNAMKWKEAAAAAVAEGGSSDWNIRSF 317
>gb|DT476446.1|DT476446 WS01229.B21_J24 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01229_J24 3', mRNA sequence
Length = 748
Score = 99.1 bits (210), Expect(3) = 1e-030
Identities = 39/83 (46%), Positives = 50/83 (60%)
Frame = +2 / -2
Query: 77 LSNELRDKCKERGLIVSWCPQLEVLAHKATGCFFTHCGWNSTLEAIVNGVPMAAIPHWAD 256
L E ++ RGL+ SWCPQ +VLAH + G F THCGWN +E I GVP+ P +AD
Sbjct: 663 LPEEFLEQIDGRGLLASWCPQDQVLAHPSVGVFLTHCGWNFMMETISCGVPVICWPFFAD 484
Query: 257 QPTISKYMESMWGLGVRVRKDEK 325
Q +Y + WG+GV V D K
Sbjct: 483 QQPNCRYACTKWGIGVEVNHDVK 415
Score = 45.1 bits (92), Expect(3) = 1e-030
Identities = 19/50 (38%), Positives = 30/50 (60%)
Frame = +2 / -2
Query: 332 VTRDEVERCIKDVMDGDSKDKYRKSATMWMQKAKAAMQNGGSSAKNITEF 481
V R+E+E +K+++ GDS + R+ A W A+AA GGSS + +F
Sbjct: 420 VKRNEIESLVKEMIGGDSGKQMRQKALEWKDIAEAATNIGGSSYNDFEKF 271
Score = 26.7 bits (52), Expect(3) = 1e-030
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +2 / -2
Query: 5 ELGNGLYNSGKPFIWVVR 58
E GL NS PF+W++R
Sbjct: 747 EFAWGLANSKLPFLWIIR 694
>gb|CF119369.1|CF119369 MTU10CS.P16.H11 Aspen stem cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 698
Score = 98.2 bits (208), Expect(2) = 4e-030
Identities = 35/73 (47%), Positives = 51/73 (69%)
Frame = +2 / +3
Query: 98 KCKERGLIVSWCPQLEVLAHKATGCFFTHCGWNSTLEAIVNGVPMAAIPHWADQPTISKY 277
K +RG +V W PQ +VLAH + CF THCGWNST+EA+ +G+P+ A P DQ T +KY
Sbjct: 135 KAGDRGNVVQWSPQEKVLAHPSVACFVTHCGWNSTMEALTSGMPVVAFPQLGDQVTNAKY 314
Query: 278 MESMWGLGVRVRK 316
+ ++ +GVR+ +
Sbjct: 315 LVDIFKVGVRMSR 353
Score = 52.8 bits (109), Expect(2) = 4e-030
Identities = 21/56 (37%), Positives = 34/56 (60%)
Frame = +2 / +3
Query: 314 KDEKGLVTRDEVERCIKDVMDGDSKDKYRKSATMWMQKAKAAMQNGGSSAKNITEF 481
K E L+TRDE+E+C+ + G + +++A W + A+AA+ GGSS N+ F
Sbjct: 357 KAENKLITRDEIEKCLLEATAGPKAVEMKENAMKWKEAAEAAVAEGGSSDWNLRYF 524
>gb|CF119771.1|CF119771 MTU10CS.P6.B05 Aspen stem cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 612
Score = 98.2 bits (208), Expect(2) = 4e-030
Identities = 35/73 (47%), Positives = 51/73 (69%)
Frame = +2 / -1
Query: 98 KCKERGLIVSWCPQLEVLAHKATGCFFTHCGWNSTLEAIVNGVPMAAIPHWADQPTISKY 277
K +RG +V W PQ +VLAH + CF THCGWNST+EA+ +G+P+ A P DQ T +KY
Sbjct: 564 KAGDRGNVVQWSPQEKVLAHPSVACFVTHCGWNSTMEALTSGMPVVAFPQLGDQVTNAKY 385
Query: 278 MESMWGLGVRVRK 316
+ ++ +GVR+ +
Sbjct: 384 LVDIFKVGVRMSR 346
Score = 52.8 bits (109), Expect(2) = 4e-030
Identities = 21/56 (37%), Positives = 34/56 (60%)
Frame = +2 / -1
Query: 314 KDEKGLVTRDEVERCIKDVMDGDSKDKYRKSATMWMQKAKAAMQNGGSSAKNITEF 481
K E L+TRDE+E+C+ + G + +++A W + A+AA+ GGSS N+ F
Sbjct: 342 KAENKLITRDEIEKCLLEATAGPKAVEMKENAMKWKEAAEAAVAEGGSSDWNLRYF 175
>gb|CV229269.1|CV229269 WS01912.B21_M05 PT-DX-N-A-10 Populus trichocarpa cDNA clone
WS01912_M05 3', mRNA sequence
Length = 759
Score = 94.5 bits (200), Expect(3) = 5e-030
Identities = 37/87 (42%), Positives = 53/87 (60%)
Frame = +2 / -3
Query: 65 EEHKLSNELRDKCKERGLIVSWCPQLEVLAHKATGCFFTHCGWNSTLEAIVNGVPMAAIP 244
E L E ++ ++RG I SWCPQ EVL H A G F TH GW ST+E++ G+P+A P
Sbjct: 586 ESAVLPAEFAEETEKRGFITSWCPQEEVLNHPAVGGFLTHSGWGSTIESLCAGLPLACWP 407
Query: 245 HWADQPTISKYMESMWGLGVRVRKDEK 325
+ADQ +Y + WG+G+ + + K
Sbjct: 406 FFADQAMNCRYSCNEWGVGMEIDNNVK 326
Score = 45.5 bits (93), Expect(3) = 5e-030
Identities = 19/50 (38%), Positives = 31/50 (62%)
Frame = +2 / -3
Query: 332 VTRDEVERCIKDVMDGDSKDKYRKSATMWMQKAKAAMQNGGSSAKNITEF 481
V R+EVE +K++M+G+ DK R A W + A+ A G+S+ N+ +F
Sbjct: 331 VKREEVEMLVKELMEGEKGDKMRGKAMEWKRLAEEAAGPEGTSSINLDKF 182
Score = 28.6 bits (56), Expect(3) = 5e-030
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +2 / -3
Query: 5 ELGNGLYNSGKPFIWVVR 58
E GL NS PF+W++R
Sbjct: 658 EFAMGLVNSNIPFLWIIR 605
>gb|CX178075.1|CX178075 G12_45-100_14.ab1 leaf inoculated with Marssonia pathogen of
Populus euramericana Populus x canadensis cDNA, mRNA
sequence
Length = 653
Score = 94.1 bits (199), Expect(3) = 5e-030
Identities = 37/87 (42%), Positives = 52/87 (59%)
Frame = +2 / +1
Query: 65 EEHKLSNELRDKCKERGLIVSWCPQLEVLAHKATGCFFTHCGWNSTLEAIVNGVPMAAIP 244
E L E + K+R L+VSWCPQ +VL H + G F +H GWNSTLE+I GVPM P
Sbjct: 202 EAAMLPPEFLSETKDRSLLVSWCPQEQVLKHPSIGGFLSHMGWNSTLESICGGVPMVCWP 381
Query: 245 HWADQPTISKYMESMWGLGVRVRKDEK 325
+ +Q T + + WG+G+ + + K
Sbjct: 382 FFGEQQTNCWFACTKWGIGMEIENNVK 462
Score = 43.7 bits (89), Expect(3) = 5e-030
Identities = 16/47 (34%), Positives = 29/47 (61%)
Frame = +2 / +1
Query: 332 VTRDEVERCIKDVMDGDSKDKYRKSATMWMQKAKAAMQNGGSSAKNI 472
V RDEVE+ ++++M+G+ ++ A W KA+ A G +S +N+
Sbjct: 457 VKRDEVEKLVRELMEGEKGKDMKRKAMEWKTKAEEAAWTGDASHRNL 597
Score = 30.9 bits (61), Expect(3) = 5e-030
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = +2 / +1
Query: 5 ELGNGLYNSGKPFIWVVR 58
E GL NS KPF+W++R
Sbjct: 130 EFAWGLANSNKPFLWIIR 183
>gb|CV283775.1|CV283775 WS0188.B21_E01 PTxD-IL-N-A-9 Populus trichocarpa x Populus
deltoides cDNA clone WS0188_E01 3', mRNA sequence
Length = 583
Score = 115 bits (245), Expect(2) = 8e-030
Identities = 43/79 (54%), Positives = 58/79 (73%)
Frame = +2 / -1
Query: 137 QLEVLAHKATGCFFTHCGWNSTLEAIVNGVPMAAIPHWADQPTISKYMESMWGLGVRVRK 316
Q+EVL+H + GCF THCGWNSTLE++V VP+ A PHW DQ T +K + +W GVRV
Sbjct: 580 QVEVLSHPSIGCFVTHCGWNSTLESLVCEVPVVAFPHWTDQGTNAKLIADVWKTGVRVVA 401
Query: 317 DEKGLVTRDEVERCIKDVM 373
+E+G+V DE++RC+ VM
Sbjct: 400 NEEGIVEGDEIKRCLDLVM 344
Score = 35.0 bits (70), Expect(2) = 8e-030
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +2 / -1
Query: 377 GDSKDKYRKSATMWMQKAKAAMQNGGSSAKNITEF 481
G + + RK+A W A+ A++ GGSS KN+ F
Sbjct: 337 GKTGEDIRKNAKKWKDVARDAVKEGGSSDKNLKAF 233
>gb|CV277559.1|CV277559 WS0143.B21_O18 PTxD-IL-A-5 Populus trichocarpa x Populus deltoides
cDNA clone WS0143_O18 3', mRNA sequence
Length = 571
Score = 115 bits (245), Expect(2) = 8e-030
Identities = 43/79 (54%), Positives = 58/79 (73%)
Frame = +2 / -1
Query: 137 QLEVLAHKATGCFFTHCGWNSTLEAIVNGVPMAAIPHWADQPTISKYMESMWGLGVRVRK 316
Q+EVL+H + GCF THCGWNSTLE++V VP+ A PHW DQ T +K + +W GVRV
Sbjct: 568 QVEVLSHPSIGCFVTHCGWNSTLESLVCEVPVVAFPHWTDQGTNAKLIADVWKTGVRVVA 389
Query: 317 DEKGLVTRDEVERCIKDVM 373
+E+G+V DE++RC+ VM
Sbjct: 388 NEEGIVEGDEIKRCLDLVM 332
Score = 35.0 bits (70), Expect(2) = 8e-030
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +2 / -1
Query: 377 GDSKDKYRKSATMWMQKAKAAMQNGGSSAKNITEF 481
G + + RK+A W A+ A++ GGSS KN+ F
Sbjct: 325 GKTGEDIRKNAKKWKDVARDAVKEGGSSDKNLKAF 221
>gb|DT518857.1|DT518857 WS02439.B21_H24 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02439_H24 3', mRNA sequence
Length = 439
Score = 128 bits (275), Expect = 2e-029
Identities = 48/89 (53%), Positives = 69/89 (77%)
Frame = +2 / +2
Query: 221 GVPMAAIPHWADQPTISKYMESMWGLGVRVRKDEKGLVTRDEVERCIKDVMDGDSKDKYR 400
GVPM A+P W DQPT +KY+ +W +GVRV+ ++KG+VT++EVE CI++VM+G+ + R
Sbjct: 11 GVPMVAMPQWTDQPTNAKYIADVWHVGVRVKANKKGIVTKEEVEGCIREVMEGERGSEMR 190
Query: 401 KSATMWMQKAKAAMQNGGSSAKNITEFAA 487
+++ WM+ AK A+ GGSS KNITEFAA
Sbjct: 191 RNSEKWMKLAKTAVDEGGSSDKNITEFAA 277
>gb|DN490532.1|DN490532 UL60PB12.3pR Populus cold stressed leaves cDNA library Populus
tremula x Populus tremuloides cDNA clone UL60PB12 3',
mRNA sequence
Length = 612
Score = 97.7 bits (207), Expect(3) = 2e-029
Identities = 37/78 (47%), Positives = 50/78 (64%)
Frame = +2 / -3
Query: 77 LSNELRDKCKERGLIVSWCPQLEVLAHKATGCFFTHCGWNSTLEAIVNGVPMAAIPHWAD 256
L E D+ K+RG I +WCPQ EVL H + G F TH GWNS E+I +GVPM +P + D
Sbjct: 454 LPPEFTDETKDRGFISNWCPQEEVLNHPSIGGFLTHSGWNSIAESISSGVPMLCLPFFGD 275
Query: 257 QPTISKYMESMWGLGVRV 310
Q T +Y + WG+G+ +
Sbjct: 274 QQTNCRYTCNEWGIGMEI 221
Score = 39.1 bits (79), Expect(3) = 2e-029
Identities = 14/45 (31%), Positives = 28/45 (62%)
Frame = +2 / -3
Query: 338 RDEVERCIKDVMDGDSKDKYRKSATMWMQKAKAAMQNGGSSAKNI 472
RD++E+ ++++M+G+ +K A W + A+ A GSS+ N+
Sbjct: 205 RDKMEKLVRELMEGEKGKSMKKKAMEWKKLAEEANGPSGSSSMNL 71
Score = 29.5 bits (58), Expect(3) = 2e-029
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = +2 / -3
Query: 5 ELGNGLYNSGKPFIWVVR 58
ELG GL S PF+W++R
Sbjct: 538 ELGMGLAKSVHPFLWIIR 485
>gb|CV254856.1|CV254856 WS02411.B21_G05 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02411_G05 3', mRNA sequence
Length = 902
Score = 117 bits (250), Expect(2) = 5e-029
Identities = 44/97 (45%), Positives = 61/97 (62%)
Frame = +2 / -3
Query: 56 RSNEEHKLSNELRDKCKERGLIVSWCPQLEVLAHKATGCFFTHCGWNSTLEAIVNGVPMA 235
R E+ + +++ +++G IV WC Q+EVL+H + GCF THCGWNST E++ +GVPM
Sbjct: 681 RGEEKEEDKLSCKEELEKQGKIVPWCSQVEVLSHPSIGCFVTHCGWNSTFESLASGVPMV 502
Query: 236 AIPHWADQPTISKYMESMWGLGVRVRKDEKGLVTRDE 346
A P W DQ T +K +E +W GVRV K V E
Sbjct: 501 AFPQWTDQLTNAKMVEDVWKTGVRVTSSNKEGVVEGE 391
Score = 29.9 bits (59), Expect(2) = 5e-029
Identities = 8/20 (40%), Positives = 15/20 (75%)
Frame = +2 / -3
Query: 5 ELGNGLYNSGKPFIWVVRSN 64
E+ L +G+PF+WV+R++
Sbjct: 741 EMARALLETGRPFLWVIRAD 682
>gb|DT513869.1|DT513869 WS02423.B21_D17 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02423_D17 3', mRNA sequence
Length = 861
Score = 117 bits (250), Expect(2) = 5e-029
Identities = 44/97 (45%), Positives = 61/97 (62%)
Frame = +2 / -1
Query: 56 RSNEEHKLSNELRDKCKERGLIVSWCPQLEVLAHKATGCFFTHCGWNSTLEAIVNGVPMA 235
R E+ + +++ +++G IV WC Q+EVL+H + GCF THCGWNST E++ +GVPM
Sbjct: 678 RGEEKEEDKLSCKEELEKQGKIVPWCSQVEVLSHPSIGCFVTHCGWNSTFESLASGVPMV 499
Query: 236 AIPHWADQPTISKYMESMWGLGVRVRKDEKGLVTRDE 346
A P W DQ T +K +E +W GVRV K V E
Sbjct: 498 AFPQWTDQLTNAKMVEDVWKTGVRVTSSNKEGVVEGE 388
Score = 29.9 bits (59), Expect(2) = 5e-029
Identities = 8/20 (40%), Positives = 15/20 (75%)
Frame = +2 / -1
Query: 5 ELGNGLYNSGKPFIWVVRSN 64
E+ L +G+PF+WV+R++
Sbjct: 738 EMARALLETGRPFLWVIRAD 679
>gb|DT482538.1|DT482538 WS02520.B21_B11 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02520_B11 3', mRNA sequence
Length = 627
Score = 112 bits (239), Expect(2) = 5e-029
Identities = 43/88 (48%), Positives = 61/88 (69%)
Frame = +2 / -2
Query: 110 RGLIVSWCPQLEVLAHKATGCFFTHCGWNSTLEAIVNGVPMAAIPHWADQPTISKYMESM 289
+G+IV W Q+ VL+H + GCF THCG NS LE++++ VP+ A PHW DQ T K + +
Sbjct: 626 QGMIVPWGCQVGVLSHPSIGCFVTHCGGNSPLESLLSEVPVVAFPHWTDQGTNPKLVADV 447
Query: 290 WGLGVRVRKDEKGLVTRDEVERCIKDVM 373
W GVRV +E+G+V DE++RC+ VM
Sbjct: 446 WKTGVRVVANEEGIVEGDEIKRCLDLVM 363
Score = 35.0 bits (70), Expect(2) = 5e-029
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +2 / -2
Query: 377 GDSKDKYRKSATMWMQKAKAAMQNGGSSAKNITEF 481
G + + RK+A W A+ A++ GGSS KN+ F
Sbjct: 356 GKTGEDIRKTAKKWKDLARDAVKEGGSSDKNLKAF 252
>gb|DT476092.1|DT476092 WS01228.B21_E09 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01228_E09 3', mRNA sequence
Length = 967
Score = 106 bits (227), Expect(2) = 5e-028
Identities = 44/115 (38%), Positives = 67/115 (58%)
Frame = +2 / -3
Query: 116 LIVSWCPQLEVLAHKATGCFFTHCGWNSTLEAIVNGVPMAAIPHWADQPTISKYMESMWG 295
++ SW PQ+ ++ H + G F THCGWNSTLEA+ G+PM A P +A+Q +
Sbjct: 650 VVKSWAPQVAIVNHSSVGGFVTHCGWNSTLEAVYAGLPMVAWPLYAEQRLNRVVLVEEMK 471
Query: 296 LGVRVRKDEKGLVTRDEVERCIKDVMDGDSKDKYRKSATMWMQKAKAAMQNGGSS 460
L + + + E G V+ DEVE+ ++ +M+ R+ A +AKAA+ GGSS
Sbjct: 470 LALSMNESEDGFVSADEVEKKVRGLMESKEGKMIRERALAMKNEAKAALSEGGSS 306
Score = 37.3 bits (75), Expect(2) = 5e-028
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +2 / -3
Query: 5 ELGNGLYNSGKPFIWVVRSNEEHKLSNELRDK 100
E+ GL NSG+ F+WVVR+ H L ++++
Sbjct: 812 EIATGLENSGQRFLWVVRNPPSHNLKVAIKEQ 717
>gb|DT476665.1|DT476665 WS01230.B21_F21 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01230_F21 3', mRNA sequence
Length = 942
Score = 106 bits (227), Expect(2) = 5e-028
Identities = 44/115 (38%), Positives = 67/115 (58%)
Frame = +2 / -3
Query: 116 LIVSWCPQLEVLAHKATGCFFTHCGWNSTLEAIVNGVPMAAIPHWADQPTISKYMESMWG 295
++ SW PQ+ ++ H + G F THCGWNSTLEA+ G+PM A P +A+Q +
Sbjct: 571 VVKSWAPQVAIVNHSSVGGFVTHCGWNSTLEAVYAGLPMVAWPLYAEQRLNRVVLVEEMK 392
Query: 296 LGVRVRKDEKGLVTRDEVERCIKDVMDGDSKDKYRKSATMWMQKAKAAMQNGGSS 460
L + + + E G V+ DEVE+ ++ +M+ R+ A +AKAA+ GGSS
Sbjct: 391 LALSMNESEDGFVSADEVEKKVRGLMESKEGKMIRERALAMKNEAKAALSEGGSS 227
Score = 37.3 bits (75), Expect(2) = 5e-028
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +2 / -3
Query: 5 ELGNGLYNSGKPFIWVVRSNEEHKLSNELRDK 100
E+ GL NSG+ F+WVVR+ H L ++++
Sbjct: 733 EIATGLENSGQRFLWVVRNPPSHNLKVAIKEQ 638
>gb|DT504178.1|DT504178 WS01312.B21_F06 PTxD-IL-FL-A-4 Populus trichocarpa x Populus
deltoides cDNA clone WS01312_F06 3', mRNA sequence
Length = 895
Score = 106 bits (227), Expect(2) = 5e-028
Identities = 44/115 (38%), Positives = 67/115 (58%)
Frame = +2 / -2
Query: 116 LIVSWCPQLEVLAHKATGCFFTHCGWNSTLEAIVNGVPMAAIPHWADQPTISKYMESMWG 295
++ SW PQ+ ++ H + G F THCGWNSTLEA+ G+PM A P +A+Q +
Sbjct: 570 VVKSWAPQVAIVNHSSVGGFVTHCGWNSTLEAVYAGLPMVAWPLYAEQRLNRVVLVEEMK 391
Query: 296 LGVRVRKDEKGLVTRDEVERCIKDVMDGDSKDKYRKSATMWMQKAKAAMQNGGSS 460
L + + + E G V+ DEVE+ ++ +M+ R+ A +AKAA+ GGSS
Sbjct: 390 LALSMNESEDGFVSADEVEKKVRGLMESKEGKMIRERALAMKNEAKAALSEGGSS 226
Score = 37.3 bits (75), Expect(2) = 5e-028
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +2 / -2
Query: 5 ELGNGLYNSGKPFIWVVRSNEEHKLSNELRDK 100
E+ GL NSG+ F+WVVR+ H L ++++
Sbjct: 732 EIATGLENSGQRFLWVVRNPPSHNLKVAIKEQ 637
>gb|CV265766.1|CV265766 WS02028.B21_C18 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02028_C18 3', mRNA sequence
Length = 728
Score = 106 bits (227), Expect(2) = 5e-028
Identities = 44/115 (38%), Positives = 67/115 (58%)
Frame = +2 / -3
Query: 116 LIVSWCPQLEVLAHKATGCFFTHCGWNSTLEAIVNGVPMAAIPHWADQPTISKYMESMWG 295
++ SW PQ+ ++ H + G F THCGWNSTLEA+ G+PM A P +A+Q +
Sbjct: 519 VVKSWAPQVAIVNHSSVGGFVTHCGWNSTLEAVYAGLPMVAWPLYAEQRLNRVVLVEEMK 340
Query: 296 LGVRVRKDEKGLVTRDEVERCIKDVMDGDSKDKYRKSATMWMQKAKAAMQNGGSS 460
L + + + E G V+ DEVE+ ++ +M+ R+ A +AKAA+ GGSS
Sbjct: 339 LALSMNESEDGFVSADEVEKKVRGLMESKEGKMIRERALAMKNEAKAALSEGGSS 175
Score = 37.3 bits (75), Expect(2) = 5e-028
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +2 / -3
Query: 5 ELGNGLYNSGKPFIWVVRSNEEHKLSNELRDK 100
E+ GL NSG+ F+WVVR+ H L ++++
Sbjct: 681 EIATGLENSGQRFLWVVRNPPSHNLKVAIKEQ 586
>gb|CV280804.1|CV280804 WS0137.B21_M10 PTxD-IL-FL-A-4 Populus trichocarpa x Populus
deltoides cDNA clone WS0137_M10 3', mRNA sequence
Length = 887
Score = 103 bits (220), Expect(2) = 6e-028
Identities = 39/80 (48%), Positives = 52/80 (65%)
Frame = +2 / -1
Query: 86 ELRDKCKERGLIVSWCPQLEVLAHKATGCFFTHCGWNSTLEAIVNGVPMAAIPHWADQPT 265
E + KERG I SWCPQ EVL+H + G F THCGW ST+E+I +GVPM P + DQ T
Sbjct: 632 EFMKETKERGFIASWCPQEEVLSHPSIGGFITHCGWGSTIESISSGVPMLCWPSFGDQQT 453
Query: 266 ISKYMESMWGLGVRVRKDEK 325
+Y + WG+G+ + + K
Sbjct: 452 NCRYTCTEWGIGMEIDSNVK 393
Score = 40.0 bits (81), Expect(2) = 6e-028
Identities = 15/47 (31%), Positives = 28/47 (59%)
Frame = +2 / -1
Query: 332 VTRDEVERCIKDVMDGDSKDKYRKSATMWMQKAKAAMQNGGSSAKNI 472
V RD VE+ ++++M+G+ K + + W + A+ A GSS+ N+
Sbjct: 398 VKRDNVEKLVRELMEGEKGKKMKSRSMEWKKLAEEATALNGSSSMNL 258
>gb|CV277009.1|CV277009 WS0142.B21_G13 PTxD-IL-A-5 Populus trichocarpa x Populus deltoides
cDNA clone WS0142_G13 3', mRNA sequence
Length = 883
Score = 103 bits (220), Expect(2) = 6e-028
Identities = 39/80 (48%), Positives = 52/80 (65%)
Frame = +2 / -3
Query: 86 ELRDKCKERGLIVSWCPQLEVLAHKATGCFFTHCGWNSTLEAIVNGVPMAAIPHWADQPT 265
E + KERG I SWCPQ EVL+H + G F THCGW ST+E+I +GVPM P + DQ T
Sbjct: 614 EFMKETKERGFIASWCPQEEVLSHPSIGGFITHCGWGSTIESISSGVPMLCWPSFGDQQT 435
Query: 266 ISKYMESMWGLGVRVRKDEK 325
+Y + WG+G+ + + K
Sbjct: 434 NCRYTCTEWGIGMEIDSNVK 375
Score = 40.0 bits (81), Expect(2) = 6e-028
Identities = 15/47 (31%), Positives = 28/47 (59%)
Frame = +2 / -3
Query: 332 VTRDEVERCIKDVMDGDSKDKYRKSATMWMQKAKAAMQNGGSSAKNI 472
V RD VE+ ++++M+G+ K + + W + A+ A GSS+ N+
Sbjct: 380 VKRDNVEKLVRELMEGEKGKKMKSRSMEWKKLAEEATALNGSSSMNL 240
>gb|CV280613.1|CV280613 WS0137.B21_A16 PTxD-IL-FL-A-4 Populus trichocarpa x Populus
deltoides cDNA clone WS0137_A16 3', mRNA sequence
Length = 879
Score = 103 bits (220), Expect(2) = 6e-028
Identities = 39/80 (48%), Positives = 52/80 (65%)
Frame = +2 / -2
Query: 86 ELRDKCKERGLIVSWCPQLEVLAHKATGCFFTHCGWNSTLEAIVNGVPMAAIPHWADQPT 265
E + KERG I SWCPQ EVL+H + G F THCGW ST+E+I +GVPM P + DQ T
Sbjct: 632 EFMKETKERGFIASWCPQEEVLSHPSIGGFITHCGWGSTIESISSGVPMLCWPSFGDQQT 453
Query: 266 ISKYMESMWGLGVRVRKDEK 325
+Y + WG+G+ + + K
Sbjct: 452 NCRYTCTEWGIGMEIDSNVK 393
Score = 40.0 bits (81), Expect(2) = 6e-028
Identities = 15/47 (31%), Positives = 28/47 (59%)
Frame = +2 / -2
Query: 332 VTRDEVERCIKDVMDGDSKDKYRKSATMWMQKAKAAMQNGGSSAKNI 472
V RD VE+ ++++M+G+ K + + W + A+ A GSS+ N+
Sbjct: 398 VKRDNVEKLVRELMEGEKGKKMKSRSMEWKKLAEEATALNGSSSMNL 258
>gb|DT504436.1|DT504436 WS01313.B21_F21 PTxD-IL-FL-A-4 Populus trichocarpa x Populus
deltoides cDNA clone WS01313_F21 3', mRNA sequence
Length = 844
Score = 103 bits (220), Expect(2) = 6e-028
Identities = 39/80 (48%), Positives = 52/80 (65%)
Frame = +2 / -3
Query: 86 ELRDKCKERGLIVSWCPQLEVLAHKATGCFFTHCGWNSTLEAIVNGVPMAAIPHWADQPT 265
E + KERG I SWCPQ EVL+H + G F THCGW ST+E+I +GVPM P + DQ T
Sbjct: 632 EFMKETKERGFIASWCPQEEVLSHPSIGGFITHCGWGSTIESISSGVPMLCWPSFGDQQT 453
Query: 266 ISKYMESMWGLGVRVRKDEK 325
+Y + WG+G+ + + K
Sbjct: 452 NCRYTCTEWGIGMEIDSNVK 393
Score = 40.0 bits (81), Expect(2) = 6e-028
Identities = 15/47 (31%), Positives = 28/47 (59%)
Frame = +2 / -3
Query: 332 VTRDEVERCIKDVMDGDSKDKYRKSATMWMQKAKAAMQNGGSSAKNI 472
V RD VE+ ++++M+G+ K + + W + A+ A GSS+ N+
Sbjct: 398 VKRDNVEKLVRELMEGEKGKKMKSRSMEWKKLAEEATALNGSSSMNL 258
>gb|CA933833.1|CA933833 MTU3TS.P13.C08 Aspen stem cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 691
Score = 97.7 bits (207), Expect(2) = 6e-028
Identities = 35/73 (47%), Positives = 51/73 (69%)
Frame = +2 / -2
Query: 98 KCKERGLIVSWCPQLEVLAHKATGCFFTHCGWNSTLEAIVNGVPMAAIPHWADQPTISKY 277
K +RG +V W PQ +VLAH + CF THCGWNST+EA+ +G+P+ A P DQ T +KY
Sbjct: 567 KAGDRGNVVRWSPQEKVLAHPSVACFVTHCGWNSTMEALTSGMPVVAFPQLGDQVTNAKY 388
Query: 278 MESMWGLGVRVRK 316
+ ++ +GVR+ +
Sbjct: 387 LVDIFKVGVRMSR 349
Score = 46.0 bits (94), Expect(2) = 6e-028
Identities = 19/59 (32%), Positives = 33/59 (55%)
Frame = +2 / -2
Query: 305 RVRKDEKGLVTRDEVERCIKDVMDGDSKDKYRKSATMWMQKAKAAMQNGGSSAKNITEF 481
R + + K + DE+E+C+ + G + +++A W + A+AA+ GGSS NI F
Sbjct: 351 RGKAENKLITRTDEIEKCLLEATAGPKAVEMKENAMKWREAAEAAVAEGGSSDWNIRYF 175
>gb|BI122064.1|BI122064 I001P93P Populus leaf cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 476
Score = 90.0 bits (190), Expect(3) = 7e-028
Identities = 34/74 (45%), Positives = 47/74 (63%)
Frame = +2 / +1
Query: 104 KERGLIVSWCPQLEVLAHKATGCFFTHCGWNSTLEAIVNGVPMAAIPHWADQPTISKYME 283
K+R L+VSWCPQ +VL H + G F +H GWNSTLE+I GVPM P +Q T +
Sbjct: 106 KDRSLLVSWCPQEQVLKHPSIGGFVSHMGWNSTLESICGGVPMVCWPFCGEQQTNCWFAC 285
Query: 284 SMWGLGVRVRKDEK 325
+ WG+G+ + + K
Sbjct: 286 TKWGIGMEIESNVK 327
Score = 43.2 bits (88), Expect(3) = 7e-028
Identities = 15/47 (31%), Positives = 30/47 (63%)
Frame = +2 / +1
Query: 332 VTRDEVERCIKDVMDGDSKDKYRKSATMWMQKAKAAMQNGGSSAKNI 472
V RDEV++ ++++M+G+ + ++ A W KA+ A G +S +N+
Sbjct: 322 VKRDEVDKLVRELMEGEKGKEMKRKAMEWKTKAEEAAWTGDASHRNL 462
Score = 28.1 bits (55), Expect(3) = 7e-028
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = +2 / +1
Query: 17 GLYNSGKPFIWVVR 58
GL N KPF+W++R
Sbjct: 7 GLANCNKPFLWIIR 48
Database: Populus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:49 PM
Number of letters in database: 203,408,664
Number of sequences in database: 369,679
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 294,572,645
Number of Sequences: 369679
Number of extensions: 4182636
Number of successful extensions: 72034
Number of sequences better than 1.0e-020: 144
length of database: 67,802,888
effective HSP length: 51
effective length of database: 48,949,259
effective search space used: 6363403670
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)