TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QAR1e04.yg.2.1
(405 letters)
Database: Populus_nucl_with_EST.fasta
369,679 sequences; 203,408,664 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CK092000.1|CK092000 G061P53.3pR Populus tension wood cDN... 207 3e-053
gb|CV228179.1|CV228179 WS0191.B21_F05 PT-DX-N-A-10 Populus ... 206 5e-053
gb|CV231593.1|CV231593 WS0194.B21_P24 PT-DX-N-A-10 Populus ... 206 5e-053
gb|CV231696.1|CV231696 WS0195.B21_E23 PT-DX-N-A-10 Populus ... 206 5e-053
gb|CV252296.1|CV252296 PX0011.B21_D12 PT-X-FL-A-1 Populus t... 206 5e-053
gb|CV275201.1|CV275201 WS0175.B21_L08 PTxD-NR-A-8 Populus t... 206 5e-053
gb|DT469980.1|DT469980 WS01919.C21_I04 PT-DX-N-A-10 Populus... 206 5e-053
emb|Y13772.1|PTY13772 Populus trichocarpa mRNA for laccase,... 206 5e-053
gb|DT523550.1|DT523550 WS02039.B21_P23 PTxN-IB-N-A-11 Popul... 205 1e-052
gb|CN550117.1|CN550117 GQ0241.B3_L15 GQ024 Populus trichoca... 203 4e-052
gb|CV228763.1|CV228763 WS01911.B21_C15 PT-DX-N-A-10 Populus... 199 7e-051
gb|CF235271.1|CF235271 PtaJXT0020G7G0713 Poplar cDNA librar... 199 1e-050
gb|CV227702.1|CV227702 WS0167.B21_P11 PT-DX-A-7 Populus tri... 199 1e-050
gb|BU883577.1|BU883577 UM93TD10 Populus flower cDNA library... 197 3e-050
gb|CV231087.1|CV231087 WS0193.B21_I04 PT-DX-N-A-10 Populus ... 197 3e-050
emb|Y18219.1|PTR18219 Populus trichocarpa GLac90 gene 129 1e-048
gb|CV226588.1|CV226588 WS0164.B21_L12 PT-DX-A-7 Populus tri... 187 3e-047
gb|CX176697.1|CX176697 F07_69-71_11.ab1 leaf inoculated wit... 125 6e-046
gb|CX169905.1|CX169905 A08_69-110_02.ab1 leaf inoculated wi... 119 5e-044
gb|CV252346.1|CV252346 PX0011.B21_G09 PT-X-FL-A-1 Populus t... 171 2e-042
gb|CV269060.1|CV269060 WS0207.B21_D13 PTxN-IB-N-A-11 Populu... 161 2e-039
gb|CF232187.1|CF232187 PtaJXO0007D8D0808 Poplar cDNA librar... 156 7e-038
gb|CV231858.1|CV231858 WS0195.B21_M10 PT-DX-N-A-10 Populus ... 151 2e-036
emb|Y13773.1|PTY13773 Populus trichocarpa mRNA for laccase,... 151 2e-036
gb|AI166300.1|AI166300 xylem.est.146 Poplar xylem Lambda ZA... 151 2e-036
gb|AI166389.1|AI166389 xylem.est.226 Poplar xylem Lambda ZA... 151 2e-036
gb|AI166460.1|AI166460 xylem.est.290 Poplar xylem Lambda ZA... 151 2e-036
gb|AI166520.1|AI166520 xylem.est.344 Poplar xylem Lambda ZA... 151 2e-036
gb|AI166601.1|AI166601 xylem.est.417 Poplar xylem Lambda ZA... 151 2e-036
gb|AI166632.1|AI166632 xylem.est.445 Poplar xylem Lambda ZA... 151 2e-036
gb|AI166804.1|AI166804 xylem.est.60 Poplar xylem Lambda ZAP... 151 2e-036
gb|AI167056.1|AI167056 xylem.est.827 Poplar xylem Lambda ZA... 151 2e-036
gb|AI167062.1|AI167062 xylem.est.832 Poplar xylem Lambda ZA... 151 2e-036
gb|CK093471.1|CK093471 G121P41.3pR Populus tension wood cDN... 151 2e-036
gb|AI167003.1|AI167003 xylem.est.78 Poplar xylem Lambda ZAP... 150 3e-036
gb|CK093624.1|CK093624 G126P32.3pR Populus tension wood cDN... 149 8e-036
gb|CV230599.1|CV230599 WS0192.B21_A21 PT-DX-N-A-10 Populus ... 149 8e-036
gb|CV230947.1|CV230947 WS0193.B21_B09 PT-DX-N-A-10 Populus ... 149 8e-036
gb|CN549675.1|CN549675 GQ0242.B3_G04 GQ024 Populus trichoca... 148 2e-035
gb|CF230443.1|CF230443 Ptac0008D7D0707 Poplar cDNA library ... 148 2e-035
gb|CV226852.1|CV226852 WS0165.B21_H15 PT-DX-A-7 Populus tri... 148 2e-035
gb|CV237346.1|CV237346 WS01227.B21.1_J01 PT-GT-FL-A-3 Popul... 147 4e-035
gb|CV238753.1|CV238753 WS0127.B21.1_O04 PT-GT-FL-A-3 Populu... 147 4e-035
emb|Y13770.1|PTY13770 Populus trichocarpa mRNA for laccase,... 147 4e-035
gb|CK092561.1|CK092561 G087P57.3pR Populus tension wood cDN... 146 7e-035
gb|DN500460.1|DN500460 UL52PE07.5pR Populus cold stressed l... 145 1e-034
emb|Y13769.1|PTY13769 Populus trichocarpa mRNA for laccase,... 145 1e-034
gb|CV229532.1|CV229532 WS01913.B21_J16 PT-DX-N-A-10 Populus... 144 2e-034
gb|AI166411.1|AI166411 xylem.est.246 Poplar xylem Lambda ZA... 143 7e-034
gb|CF235421.1|CF235421 PtaJXT0022F2F0212 Poplar cDNA librar... 143 7e-034
gb|CK318594.1|CK318594 X9P01a06 Populus stem seasonal libra... 143 7e-034
gb|CK318602.1|CK318602 X9P01b04 Populus stem seasonal libra... 143 7e-034
gb|CV226336.1|CV226336 WS0163.B21_P14 PT-DX-A-7 Populus tri... 143 7e-034
gb|CV230874.1|CV230874 WS0192.B21_O04 PT-DX-N-A-10 Populus ... 143 7e-034
emb|Y13771.1|PTY13771 Populus trichocarpa mRNA for laccase,... 143 7e-034
gb|BU894215.1|BU894215 X004E09 Populus wood cDNA library Po... 142 9e-034
gb|CK096807.1|CK096807 UB27CPE12.3pR Populus active cambium... 142 1e-033
gb|CN550235.1|CN550235 GQ0241.B3_N02 GQ024 Populus trichoca... 141 2e-033
gb|CK089209.1|CK089209 B005P17.3pR Hybrid aspen plasmid lib... 141 2e-033
gb|DN488383.1|DN488383 R055G11.3pR Populus root cDNA librar... 139 6e-033
gb|DN498068.1|DN498068 R055G11.5pR Populus root cDNA librar... 139 6e-033
gb|DN487816.1|DN487816 R006B01.3pR Populus root cDNA librar... 137 3e-032
gb|CV225905.1|CV225905 WS0162.B21_L16 PT-DX-A-7 Populus tri... 135 1e-031
gb|DN499521.1|DN499521 T066A07.5pR Populus shoot meristem c... 98 3e-031
emb|Y18217.1|PTR18217 Populus trichocarpa GLac1 gene 94 2e-030
gb|CF235172.1|CF235172 PtaJXT0019F7F0711 Poplar cDNA librar... 131 2e-030
gb|BU809005.1|BU809005 UL52PE07 Populus leaf cDNA library P... 130 4e-030
gb|BU889538.1|BU889538 P022C06 Populus petioles cDNA librar... 129 9e-030
gb|CK096279.1|CK096279 UA54DPE12.3pR Populus dormant cambiu... 127 2e-029
gb|CV258098.1|CV258098 WS0248.B21_I15 PTxD-ICC-N-A-14 Popul... 127 2e-029
gb|CV261823.1|CV261823 WS02017.B21_O01 PTxN-IB-N-A-11 Popul... 127 2e-029
gb|CV269529.1|CV269529 WS0208.B21_I04 PTxN-IB-N-A-11 Populu... 127 3e-029
gb|BU834813.1|BU834813 T066A07 Populus apical shoot cDNA li... 98 1e-028
emb|Y18218.1|PTR18218 Populus trichocarpa GLac3 gene 94 1e-028
gb|BU816976.1|BU816976 UA11BPD10 Populus tremula cambium cD... 125 2e-028
gb|CK095498.1|CK095498 UA11BPD10.3pR Populus dormant cambiu... 125 2e-028
gb|CK105405.1|CK105405 UA11BPD10.5pR Populus dormant cambiu... 125 2e-028
gb|CV227023.1|CV227023 WS0165.B21_P14 PT-DX-A-7 Populus tri... 125 2e-028
gb|CV226590.1|CV226590 WS0164.B21_L14 PT-DX-A-7 Populus tri... 124 2e-028
gb|CA821748.1|CA821748 RSH06H10 two-month-old roots from cl... 124 3e-028
gb|CV253297.1|CV253297 WS0221.B21_H23 PTxD-ICC-A-12 Populus... 123 4e-028
gb|DT477653.1|DT477653 WS02520.BR_J07 PT-MB-N-A-15 Populus ... 123 4e-028
gb|DT482712.1|DT482712 WS02520.B21_J07 PT-MB-N-A-15 Populus... 123 4e-028
gb|DT488999.1|DT488999 WS02538.B21_A10 PT-MB-N-A-15 Populus... 123 4e-028
gb|DT509692.1|DT509692 WS02424.BR_G24 PTxD-ICC-N-A-14 Popul... 123 4e-028
gb|DT514298.1|DT514298 WS02424.B21_G24 PTxD-ICC-N-A-14 Popu... 123 4e-028
gb|CV259439.1|CV259439 WS02011.B21_F21 PTxN-IB-N-A-11 Popul... 123 6e-028
gb|CV264399.1|CV264399 WS02024.B21_G19 PTxN-IB-N-A-11 Popul... 123 6e-028
gb|CV267037.1|CV267037 WS02030.B21_K13 PTxN-IB-N-A-11 Popul... 123 6e-028
gb|CV270391.1|CV270391 WS0151.B21_N23 PTxN-IB-A-6 Populus t... 123 6e-028
gb|DT523771.1|DT523771 WS02040.B21_J16 PTxN-IB-N-A-11 Popul... 123 6e-028
gb|BI127767.1|BI127767 G065P65Y Populus cambium cDNA librar... 123 6e-028
gb|CK102814.1|CK102814 G092P55.5pR Populus tension wood cDN... 123 6e-028
gb|CV267633.1|CV267633 WS02032.B21_E13 PTxN-IB-N-A-11 Popul... 123 6e-028
gb|CV271723.1|CV271723 WS0155.B21_H20 PTxN-IB-A-6 Populus t... 123 6e-028
gb|CK093304.1|CK093304 G114P64.3pR Populus tension wood cDN... 101 3e-027
gb|CV269904.1|CV269904 WS0209.B21_I21 PTxN-IB-N-A-11 Populu... 120 4e-027
gb|CV273448.1|CV273448 WS01711.B21_A12 PTxD-NR-A-8 Populus ... 119 1e-026
gb|AI166348.1|AI166348 xylem.est.19 Poplar xylem Lambda ZAP... 118 2e-026
gb|BI129564.1|BI129564 G092P55Y Populus cambium cDNA librar... 117 3e-026
gb|BI131616.1|BI131616 G123P32Y Populus cambium cDNA librar... 92 4e-026
gb|BU884567.1|BU884567 R012D08 Populus root cDNA library Po... 115 2e-025
gb|DN488156.1|DN488156 R037A07.3pR Populus root cDNA librar... 114 2e-025
gb|CA825674.1|CA825674 R64D08 two-month-old roots from clon... 113 6e-025
gb|CV252649.1|CV252649 PX0015.B21_I08 PT-X-FL-A-1 Populus t... 110 6e-024
gb|DT500456.1|DT500456 PX0015.BR_I08 PT-X-FL-A-1 Populus tr... 110 6e-024
gb|CV236076.1|CV236076 WS01222.B21_L19 PT-GT-FL-A-3 Populus... 109 1e-023
gb|CF216210.1|CF216210 PT1024 Hybrid aspen xylem up-regulat... 88 3e-023
gb|BU885840.1|BU885840 R037A07 Populus root cDNA library Po... 105 2e-022
gb|CV228782.1|CV228782 WS01911.B21_D14 PT-DX-N-A-10 Populus... 104 3e-022
gb|CV267425.1|CV267425 WS02031.B21_L09 PTxN-IB-N-A-11 Popul... 104 3e-022
gb|CK092163.1|CK092163 G068P49.3pR Populus tension wood cDN... 104 4e-022
gb|CK093718.1|CK093718 G130P81.3pR Populus tension wood cDN... 58 9e-022
gb|BU813977.1|BU813977 N023D09 Populus bark cDNA library Po... 102 9e-022
gb|CV229129.1|CV229129 WS01912.B21_E23 PT-DX-N-A-10 Populus... 102 9e-022
gb|DN485668.1|DN485668 N023D09.3pR Populus bark cDNA librar... 102 9e-022
gb|DN495170.1|DN495170 N023D09.5pR Populus bark cDNA librar... 102 9e-022
gb|DT525031.1|DT525031 WS02044.C21_E02 PTxN-IB-N-A-11 Popul... 102 9e-022
gb|CV257634.1|CV257634 WS0247.B21_D12 PTxD-ICC-N-A-14 Popul... 102 1e-021
gb|DT524522.1|DT524522 WS02042.C21.1_O02 PTxN-IB-N-A-11 Pop... 102 1e-021
gb|CK102193.1|CK102193 G068P49.5pR Populus tension wood cDN... 102 1e-021
gb|DT469776.1|DT469776 WS01918.C21_N18 PT-DX-N-A-10 Populus... 102 1e-021
gb|CX658997.1|CX658997 PO01025B07 Poplar SC cDNA library Po... 101 2e-021
gb|CA823733.1|CA823733 R30E05 two-month-old roots from clon... 100 9e-021
gb|DN489617.1|DN489617 T066A07.3pR Populus shoot meristem c... 56 1e-020
>gb|CK092000.1|CK092000 G061P53.3pR Populus tension wood cDNA library Populus tremula x
Populus tremuloides cDNA clone G061P53 3', mRNA sequence
Length = 641
Score = 207 bits (446), Expect = 3e-053
Identities = 82/109 (75%), Positives = 90/109 (82%)
Frame = +1 / -2
Query: 1 NHPIHLHGYDFYILAEGFGNFDAXADTASFNMDDPPMRNTVGVPVNGWAVIRFVADNPGX 180
NHPIHLHGYDFYI+AEGFGNF+ D + FN+ DPPMRNTV VPVNGWAVIRFVADNPG
Sbjct: 511 NHPIHLHGYDFYIIAEGFGNFNPKTDKSKFNLVDPPMRNTVAVPVNGWAVIRFVADNPGV 332
Query: 181 XLMHCHLDVHITWGLAMAFLVEDGVGEMQSLEAXXXDXXIC*LILVLHR 327
LMHCHLDVHITWGLAMAFLVE+GVG +QS+E D IC*LI + R
Sbjct: 331 WLMHCHLDVHITWGLAMAFLVEEGVGILQSVEPPPADLPIC*LISIHKR 185
Score = 138 bits (297), Expect = 1e-032
Identities = 60/103 (58%), Positives = 72/103 (69%)
Frame = -2 / +3
Query: 311 MS*QMXXSXXXASSDCISPTPSSTRNAMARPQVMCTSRWQCMSXXPGLSATKRMTAQPLT 132
++* + S S+ C PTPSST+NAMARP VM TS+ QC+S PGLSAT +TA P T
Sbjct: 201 IN*HIGRSAGGGSTLCKIPTPSSTKNAMARPHVM*TSK*QCISHTPGLSATNLITAHPFT 380
Query: 131 GTPTVFLMGGSSMLKLAVSAXASKLPKPSARM*KS*PWRWMGW 3
GT TVFL+GGS+ L L +S K P PSA M*KS PWRW+GW
Sbjct: 381 GTATVFLIGGSTRLNLDLSVLGLKFPNPSAMM*KSYPWRWIGW 509
>gb|CV228179.1|CV228179 WS0191.B21_F05 PT-DX-N-A-10 Populus trichocarpa cDNA clone
WS0191_F05 3', mRNA sequence
Length = 899
Score = 206 bits (445), Expect = 5e-053
Identities = 81/109 (74%), Positives = 90/109 (82%)
Frame = +1 / -1
Query: 1 NHPIHLHGYDFYILAEGFGNFDAXADTASFNMDDPPMRNTVGVPVNGWAVIRFVADNPGX 180
NHPIHLHGYDFYI+AEGFGNF+ D + FN+ DPPMRNTV VPVNGWAVIRFVADNPG
Sbjct: 611 NHPIHLHGYDFYIIAEGFGNFNPKTDKSKFNLVDPPMRNTVAVPVNGWAVIRFVADNPGV 432
Query: 181 XLMHCHLDVHITWGLAMAFLVEDGVGEMQSLEAXXXDXXIC*LILVLHR 327
LMHCHLDVHITWGLAMAFLVE+G+G +QS+E D IC*LI + R
Sbjct: 431 WLMHCHLDVHITWGLAMAFLVEEGIGILQSVEPPPADLPIC*LISIHKR 285
Score = 136 bits (291), Expect = 8e-032
Identities = 59/103 (57%), Positives = 71/103 (68%)
Frame = -2 / +1
Query: 311 MS*QMXXSXXXASSDCISPTPSSTRNAMARPQVMCTSRWQCMSXXPGLSATKRMTAQPLT 132
++* + S S+ C P PSST+NAMARP VM TS+ QC+S PGLSAT +TA P T
Sbjct: 301 IN*HIGRSAGGGSTLCKIPIPSSTKNAMARPHVM*TSK*QCISHTPGLSATNLITAHPFT 480
Query: 131 GTPTVFLMGGSSMLKLAVSAXASKLPKPSARM*KS*PWRWMGW 3
GT TVFL+GGS+ L L +S K P PSA M*KS PWRW+GW
Sbjct: 481 GTATVFLIGGSTRLNLDLSVLGLKFPNPSAMM*KSYPWRWIGW 609
>gb|CV231593.1|CV231593 WS0194.B21_P24 PT-DX-N-A-10 Populus trichocarpa cDNA clone
WS0194_P24 3', mRNA sequence
Length = 730
Score = 206 bits (445), Expect = 5e-053
Identities = 81/109 (74%), Positives = 90/109 (82%)
Frame = +1 / -3
Query: 1 NHPIHLHGYDFYILAEGFGNFDAXADTASFNMDDPPMRNTVGVPVNGWAVIRFVADNPGX 180
NHPIHLHGYDFYI+AEGFGNF+ D + FN+ DPPMRNTV VPVNGWAVIRFVADNPG
Sbjct: 617 NHPIHLHGYDFYIIAEGFGNFNPKTDKSKFNLVDPPMRNTVAVPVNGWAVIRFVADNPGV 438
Query: 181 XLMHCHLDVHITWGLAMAFLVEDGVGEMQSLEAXXXDXXIC*LILVLHR 327
LMHCHLDVHITWGLAMAFLVE+G+G +QS+E D IC*LI + R
Sbjct: 437 WLMHCHLDVHITWGLAMAFLVEEGIGILQSVEPPPADLPIC*LISIHKR 291
Score = 136 bits (291), Expect = 8e-032
Identities = 59/103 (57%), Positives = 71/103 (68%)
Frame = -2 / +1
Query: 311 MS*QMXXSXXXASSDCISPTPSSTRNAMARPQVMCTSRWQCMSXXPGLSATKRMTAQPLT 132
++* + S S+ C P PSST+NAMARP VM TS+ QC+S PGLSAT +TA P T
Sbjct: 307 IN*HIGRSAGGGSTLCKIPIPSSTKNAMARPHVM*TSK*QCISHTPGLSATNLITAHPFT 486
Query: 131 GTPTVFLMGGSSMLKLAVSAXASKLPKPSARM*KS*PWRWMGW 3
GT TVFL+GGS+ L L +S K P PSA M*KS PWRW+GW
Sbjct: 487 GTATVFLIGGSTRLNLDLSVLGLKFPNPSAMM*KSYPWRWIGW 615
>gb|CV231696.1|CV231696 WS0195.B21_E23 PT-DX-N-A-10 Populus trichocarpa cDNA clone
WS0195_E23 3', mRNA sequence
Length = 673
Score = 206 bits (445), Expect = 5e-053
Identities = 81/109 (74%), Positives = 90/109 (82%)
Frame = +1 / -3
Query: 1 NHPIHLHGYDFYILAEGFGNFDAXADTASFNMDDPPMRNTVGVPVNGWAVIRFVADNPGX 180
NHPIHLHGYDFYI+AEGFGNF+ D + FN+ DPPMRNTV VPVNGWAVIRFVADNPG
Sbjct: 533 NHPIHLHGYDFYIIAEGFGNFNPKTDKSKFNLVDPPMRNTVAVPVNGWAVIRFVADNPGV 354
Query: 181 XLMHCHLDVHITWGLAMAFLVEDGVGEMQSLEAXXXDXXIC*LILVLHR 327
LMHCHLDVHITWGLAMAFLVE+G+G +QS+E D IC*LI + R
Sbjct: 353 WLMHCHLDVHITWGLAMAFLVEEGIGILQSVEPPPADLPIC*LISIHKR 207
Score = 136 bits (291), Expect = 8e-032
Identities = 59/103 (57%), Positives = 71/103 (68%)
Frame = -2 / +1
Query: 311 MS*QMXXSXXXASSDCISPTPSSTRNAMARPQVMCTSRWQCMSXXPGLSATKRMTAQPLT 132
++* + S S+ C P PSST+NAMARP VM TS+ QC+S PGLSAT +TA P T
Sbjct: 223 IN*HIGRSAGGGSTLCKIPIPSSTKNAMARPHVM*TSK*QCISHTPGLSATNLITAHPFT 402
Query: 131 GTPTVFLMGGSSMLKLAVSAXASKLPKPSARM*KS*PWRWMGW 3
GT TVFL+GGS+ L L +S K P PSA M*KS PWRW+GW
Sbjct: 403 GTATVFLIGGSTRLNLDLSVLGLKFPNPSAMM*KSYPWRWIGW 531
>gb|CV252296.1|CV252296 PX0011.B21_D12 PT-X-FL-A-1 Populus trichocarpa cDNA clone
PX0011_D12 3', mRNA sequence
Length = 613
Score = 206 bits (445), Expect = 5e-053
Identities = 81/109 (74%), Positives = 90/109 (82%)
Frame = +1 / -3
Query: 1 NHPIHLHGYDFYILAEGFGNFDAXADTASFNMDDPPMRNTVGVPVNGWAVIRFVADNPGX 180
NHPIHLHGYDFYI+AEGFGNF+ D + FN+ DPPMRNTV VPVNGWAVIRFVADNPG
Sbjct: 608 NHPIHLHGYDFYIIAEGFGNFNPKTDKSKFNLVDPPMRNTVAVPVNGWAVIRFVADNPGV 429
Query: 181 XLMHCHLDVHITWGLAMAFLVEDGVGEMQSLEAXXXDXXIC*LILVLHR 327
LMHCHLDVHITWGLAMAFLVE+G+G +QS+E D IC*LI + R
Sbjct: 428 WLMHCHLDVHITWGLAMAFLVEEGIGILQSVEPPPADLPIC*LISIHKR 282
Score = 136 bits (291), Expect = 8e-032
Identities = 59/103 (57%), Positives = 71/103 (68%)
Frame = -2 / +1
Query: 311 MS*QMXXSXXXASSDCISPTPSSTRNAMARPQVMCTSRWQCMSXXPGLSATKRMTAQPLT 132
++* + S S+ C P PSST+NAMARP VM TS+ QC+S PGLSAT +TA P T
Sbjct: 298 IN*HIGRSAGGGSTLCKIPIPSSTKNAMARPHVM*TSK*QCISHTPGLSATNLITAHPFT 477
Query: 131 GTPTVFLMGGSSMLKLAVSAXASKLPKPSARM*KS*PWRWMGW 3
GT TVFL+GGS+ L L +S K P PSA M*KS PWRW+GW
Sbjct: 478 GTATVFLIGGSTRLNLDLSVLGLKFPNPSAMM*KSYPWRWIGW 606
>gb|CV275201.1|CV275201 WS0175.B21_L08 PTxD-NR-A-8 Populus trichocarpa x Populus deltoides
cDNA clone WS0175_L08 3', mRNA sequence
Length = 759
Score = 206 bits (445), Expect = 5e-053
Identities = 81/109 (74%), Positives = 90/109 (82%)
Frame = +1 / -1
Query: 1 NHPIHLHGYDFYILAEGFGNFDAXADTASFNMDDPPMRNTVGVPVNGWAVIRFVADNPGX 180
NHPIHLHGYDFYI+AEGFGNF+ D + FN+ DPPMRNTV VPVNGWAVIRFVADNPG
Sbjct: 618 NHPIHLHGYDFYIIAEGFGNFNPKTDKSKFNLVDPPMRNTVAVPVNGWAVIRFVADNPGV 439
Query: 181 XLMHCHLDVHITWGLAMAFLVEDGVGEMQSLEAXXXDXXIC*LILVLHR 327
LMHCHLDVHITWGLAMAFLVE+G+G +QS+E D IC*LI + R
Sbjct: 438 WLMHCHLDVHITWGLAMAFLVEEGIGILQSVEPPPADLPIC*LISIHKR 292
Score = 136 bits (291), Expect = 8e-032
Identities = 59/103 (57%), Positives = 71/103 (68%)
Frame = -2 / +2
Query: 311 MS*QMXXSXXXASSDCISPTPSSTRNAMARPQVMCTSRWQCMSXXPGLSATKRMTAQPLT 132
++* + S S+ C P PSST+NAMARP VM TS+ QC+S PGLSAT +TA P T
Sbjct: 308 IN*HIGRSAGGGSTLCKIPIPSSTKNAMARPHVM*TSK*QCISHTPGLSATNLITAHPFT 487
Query: 131 GTPTVFLMGGSSMLKLAVSAXASKLPKPSARM*KS*PWRWMGW 3
GT TVFL+GGS+ L L +S K P PSA M*KS PWRW+GW
Sbjct: 488 GTATVFLIGGSTRLNLDLSVLGLKFPNPSAMM*KSYPWRWIGW 616
>gb|DT469980.1|DT469980 WS01919.C21_I04 PT-DX-N-A-10 Populus trichocarpa cDNA clone
WS01919_I04 3', mRNA sequence
Length = 624
Score = 206 bits (445), Expect = 5e-053
Identities = 81/109 (74%), Positives = 90/109 (82%)
Frame = +1 / -2
Query: 1 NHPIHLHGYDFYILAEGFGNFDAXADTASFNMDDPPMRNTVGVPVNGWAVIRFVADNPGX 180
NHPIHLHGYDFYI+AEGFGNF+ D + FN+ DPPMRNTV VPVNGWAVIRFVADNPG
Sbjct: 611 NHPIHLHGYDFYIIAEGFGNFNPKTDKSKFNLVDPPMRNTVAVPVNGWAVIRFVADNPGV 432
Query: 181 XLMHCHLDVHITWGLAMAFLVEDGVGEMQSLEAXXXDXXIC*LILVLHR 327
LMHCHLDVHITWGLAMAFLVE+G+G +QS+E D IC*LI + R
Sbjct: 431 WLMHCHLDVHITWGLAMAFLVEEGIGILQSVEPPPADLPIC*LISIHKR 285
Score = 136 bits (291), Expect = 8e-032
Identities = 59/103 (57%), Positives = 71/103 (68%)
Frame = -2 / +1
Query: 311 MS*QMXXSXXXASSDCISPTPSSTRNAMARPQVMCTSRWQCMSXXPGLSATKRMTAQPLT 132
++* + S S+ C P PSST+NAMARP VM TS+ QC+S PGLSAT +TA P T
Sbjct: 301 IN*HIGRSAGGGSTLCKIPIPSSTKNAMARPHVM*TSK*QCISHTPGLSATNLITAHPFT 480
Query: 131 GTPTVFLMGGSSMLKLAVSAXASKLPKPSARM*KS*PWRWMGW 3
GT TVFL+GGS+ L L +S K P PSA M*KS PWRW+GW
Sbjct: 481 GTATVFLIGGSTRLNLDLSVLGLKFPNPSAMM*KSYPWRWIGW 609
>emb|Y13772.1|PTY13772 Populus trichocarpa mRNA for laccase, lac90 gene
Length = 2080
Score = 206 bits (445), Expect = 5e-053
Identities = 81/109 (74%), Positives = 90/109 (82%)
Frame = +1 / +2
Query: 1 NHPIHLHGYDFYILAEGFGNFDAXADTASFNMDDPPMRNTVGVPVNGWAVIRFVADNPGX 180
NHPIHLHGYDFYI+AEGFGNF+ D + FN+ DPPMRNTV VPVNGWAVIRFVADNPG
Sbjct: 1469 NHPIHLHGYDFYIIAEGFGNFNPKTDKSKFNLVDPPMRNTVAVPVNGWAVIRFVADNPGV 1648
Query: 181 XLMHCHLDVHITWGLAMAFLVEDGVGEMQSLEAXXXDXXIC*LILVLHR 327
LMHCHLDVHITWGLAMAFLVE+G+G +QS+E D IC*LI + R
Sbjct: 1649 WLMHCHLDVHITWGLAMAFLVEEGIGILQSVEPPPADLPIC*LISIHKR 1795
Score = 136 bits (291), Expect = 8e-032
Identities = 59/103 (57%), Positives = 71/103 (68%)
Frame = -2 / -2
Query: 311 MS*QMXXSXXXASSDCISPTPSSTRNAMARPQVMCTSRWQCMSXXPGLSATKRMTAQPLT 132
++* + S S+ C P PSST+NAMARP VM TS+ QC+S PGLSAT +TA P T
Sbjct: 1779 IN*HIGRSAGGGSTLCKIPIPSSTKNAMARPHVM*TSK*QCISHTPGLSATNLITAHPFT 1600
Query: 131 GTPTVFLMGGSSMLKLAVSAXASKLPKPSARM*KS*PWRWMGW 3
GT TVFL+GGS+ L L +S K P PSA M*KS PWRW+GW
Sbjct: 1599 GTATVFLIGGSTRLNLDLSVLGLKFPNPSAMM*KSYPWRWIGW 1471
>gb|DT523550.1|DT523550 WS02039.B21_P23 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02039_P23 3', mRNA sequence
Length = 594
Score = 205 bits (442), Expect = 1e-052
Identities = 80/109 (73%), Positives = 89/109 (81%)
Frame = +1 / -2
Query: 1 NHPIHLHGYDFYILAEGFGNFDAXADTASFNMDDPPMRNTVGVPVNGWAVIRFVADNPGX 180
NHPIHLHGYDFYI+AEGFGNF+ D + FN+ DPPMRNTV VPVNGWAVIRFVADNPG
Sbjct: 557 NHPIHLHGYDFYIIAEGFGNFNPKTDKSKFNLVDPPMRNTVAVPVNGWAVIRFVADNPGV 378
Query: 181 XLMHCHLDVHITWGLAMAFLVEDGVGEMQSLEAXXXDXXIC*LILVLHR 327
LMHCHLDVHITWGLAMAFLVE+G+G +QS+E D IC* I + R
Sbjct: 377 WLMHCHLDVHITWGLAMAFLVEEGIGILQSVEPPPADLPIC*FISIRKR 231
Score = 138 bits (297), Expect = 1e-032
Identities = 61/108 (56%), Positives = 73/108 (67%)
Frame = -2 / +1
Query: 326 LCKTRMS*QMXXSXXXASSDCISPTPSSTRNAMARPQVMCTSRWQCMSXXPGLSATKRMT 147
L + M+* + S S+ C P PSST+NAMARP VM TS+ QC+S PGLSAT +T
Sbjct: 232 LLRIDMN*HIGRSAGGGSTLCKIPIPSSTKNAMARPHVM*TSK*QCISHTPGLSATNLIT 411
Query: 146 AQPLTGTPTVFLMGGSSMLKLAVSAXASKLPKPSARM*KS*PWRWMGW 3
A P TGT TVFL+GGS+ L L +S K P PSA M*KS PWRW+GW
Sbjct: 412 AHPFTGTATVFLIGGSTRLNLDLSVLGLKFPNPSAMM*KSYPWRWIGW 555
>gb|CN550117.1|CN550117 GQ0241.B3_L15 GQ024 Populus trichocarpa x Populus deltoides cDNA
clone GQ0241_L15 5', mRNA sequence
Length = 659
Score = 203 bits (438), Expect = 4e-052
Identities = 79/103 (76%), Positives = 86/103 (83%)
Frame = +1 / +2
Query: 1 NHPIHLHGYDFYILAEGFGNFDAXADTASFNMDDPPMRNTVGVPVNGWAVIRFVADNPGX 180
NHPIHLHGYDFYI+AEGFGNF+ + FN+ DPPMRNTV VP NGWAVIRFVADNPG
Sbjct: 50 NHPIHLHGYDFYIIAEGFGNFNPKTHKSKFNLVDPPMRNTVAVPSNGWAVIRFVADNPGV 229
Query: 181 XLMHCHLDVHITWGLAMAFLVEDGVGEMQSLEAXXXDXXIC*L 309
LMHCHLDVHITWGLAMAFLVEDG+GE+QS+E D IC*L
Sbjct: 230 WLMHCHLDVHITWGLAMAFLVEDGIGELQSVEPPPADLPIC*L 358
Score = 122 bits (262), Expect = 8e-028
Identities = 56/102 (54%), Positives = 67/102 (65%)
Frame = -2 / -3
Query: 308 S*QMXXSXXXASSDCISPTPSSTRNAMARPQVMCTSRWQCMSXXPGLSATKRMTAQPLTG 129
+* + S S+ C SP PSST+ AMA+P VM TS+ QC+S PGLSAT MTA P G
Sbjct: 357 N*HIGRSAGGGSTLCNSPIPSSTKKAMAKPHVM*TSK*QCISHTPGLSATNLMTAHPFEG 178
Query: 128 TPTVFLMGGSSMLKLAVSAXASKLPKPSARM*KS*PWRWMGW 3
T TVFL+GGS+ L L + K P PSA M*KS P RW+GW
Sbjct: 177 TATVFLIGGSTRLNLDL*VLGLKFPNPSAMM*KSYP*RWIGW 52
>gb|CV228763.1|CV228763 WS01911.B21_C15 PT-DX-N-A-10 Populus trichocarpa cDNA clone
WS01911_C15 3', mRNA sequence
Length = 758
Score = 199 bits (429), Expect = 7e-051
Identities = 75/102 (73%), Positives = 88/102 (86%)
Frame = +1 / -1
Query: 1 NHPIHLHGYDFYILAEGFGNFDAXADTASFNMDDPPMRNTVGVPVNGWAVIRFVADNPGX 180
NHPIHLHGYDFYI+A+GFGN++ AD + FN+ DPP+RNTV VPVNGWAVIRFVADNPG
Sbjct: 536 NHPIHLHGYDFYIIAQGFGNYNPRADPSKFNLVDPPLRNTVAVPVNGWAVIRFVADNPGV 357
Query: 181 XLMHCHLDVHITWGLAMAFLVEDGVGEMQSLEAXXXDXXIC* 306
LMHCHLDVHITWGLA AFLVE+GVG++QS+E+ D +C*
Sbjct: 356 WLMHCHLDVHITWGLATAFLVENGVGQLQSIESPPEDLPLC* 231
Score = 133 bits (285), Expect = 5e-031
Identities = 58/91 (63%), Positives = 63/91 (69%)
Frame = -2 / +1
Query: 275 SSDCISPTPSSTRNAMARPQVMCTSRWQCMSXXPGLSATKRMTAQPLTGTPTVFLMGGSS 96
S DC PTP ST+ A+ARPQVM TSRWQC+S PGLSAT RMTA P TGT TVFL GGS+
Sbjct: 262 SMDCNCPTPFSTKKAVARPQVMWTSRWQCISHTPGLSATNRMTAHPFTGTATVFLRGGST 441
Query: 95 MLKLAVSAXASKLPKPSARM*KS*PWRWMGW 3
L SA P P A M*KS P RW+GW
Sbjct: 442 RLNFDGSARGL*FPNPCAIM*KSYP*RWIGW 534
>gb|CF235271.1|CF235271 PtaJXT0020G7G0713 Poplar cDNA library from young tension xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 755
Score = 199 bits (428), Expect = 1e-050
Identities = 75/102 (73%), Positives = 87/102 (85%)
Frame = +1 / +3
Query: 1 NHPIHLHGYDFYILAEGFGNFDAXADTASFNMDDPPMRNTVGVPVNGWAVIRFVADNPGX 180
NHPIHLHGYDFYI+A+GFGN++ D + FN+ DPP+RNTV VPVNGWAVIRFVADNPG
Sbjct: 360 NHPIHLHGYDFYIIAQGFGNYNPRTDPSKFNLVDPPLRNTVAVPVNGWAVIRFVADNPGV 539
Query: 181 XLMHCHLDVHITWGLAMAFLVEDGVGEMQSLEAXXXDXXIC* 306
LMHCHLDVHITWGLA AFLVE+GVGE+QS+E+ D +C*
Sbjct: 540 WLMHCHLDVHITWGLATAFLVENGVGELQSIESPPEDLPLC* 665
Score = 122 bits (260), Expect = 2e-027
Identities = 55/91 (60%), Positives = 61/91 (67%)
Frame = -2 / -2
Query: 275 SSDCISPTPSSTRNAMARPQVMCTSRWQCMSXXPGLSATKRMTAQPLTGTPTVFLMGGSS 96
S DC SPTP ST+ A+ARPQVM TS+WQC+S PGLSAT MTA P TGT TVFL GGS+
Sbjct: 634 SMDCSSPTPFSTKKAVARPQVM*TSKWQCISQTPGLSATNLMTAHPFTGTATVFLRGGST 455
Query: 95 MLKLAVSAXASKLPKPSARM*KS*PWRWMGW 3
L S P P A M*KS P R +GW
Sbjct: 454 RLNFDGSVRGL*FPNPCAIM*KSYP*R*IGW 362
>gb|CV227702.1|CV227702 WS0167.B21_P11 PT-DX-A-7 Populus trichocarpa cDNA clone WS0167_P11
3', mRNA sequence
Length = 924
Score = 199 bits (428), Expect = 1e-050
Identities = 75/102 (73%), Positives = 87/102 (85%)
Frame = +1 / -3
Query: 1 NHPIHLHGYDFYILAEGFGNFDAXADTASFNMDDPPMRNTVGVPVNGWAVIRFVADNPGX 180
NHPIHLHGYDFYI+A+GFGN++ D + FN+ DPP+RNTV VPVNGWAVIRFVADNPG
Sbjct: 523 NHPIHLHGYDFYIIAQGFGNYNPRTDPSKFNLVDPPLRNTVAVPVNGWAVIRFVADNPGV 344
Query: 181 XLMHCHLDVHITWGLAMAFLVEDGVGEMQSLEAXXXDXXIC* 306
LMHCHLDVHITWGLA AFLVE+GVGE+QS+E+ D +C*
Sbjct: 343 WLMHCHLDVHITWGLATAFLVENGVGELQSIESPPEDLPLC* 218
Score = 128 bits (274), Expect = 2e-029
Identities = 56/91 (61%), Positives = 62/91 (68%)
Frame = -2 / +3
Query: 275 SSDCISPTPSSTRNAMARPQVMCTSRWQCMSXXPGLSATKRMTAQPLTGTPTVFLMGGSS 96
S DC SPTP ST+ A+ARPQVM TS+WQC+S PGLSAT MTA P TGT TVFL GGS+
Sbjct: 249 SMDCNSPTPFSTKKAVARPQVM*TSKWQCISQTPGLSATNLMTAHPFTGTATVFLRGGST 428
Query: 95 MLKLAVSAXASKLPKPSARM*KS*PWRWMGW 3
L S P P A M*KS PWR +GW
Sbjct: 429 RLNFDGSVRGL*FPNPCAIM*KSYPWR*IGW 521
>gb|BU883577.1|BU883577 UM93TD10 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 599
Score = 197 bits (425), Expect = 3e-050
Identities = 74/102 (72%), Positives = 87/102 (85%)
Frame = +1 / +1
Query: 1 NHPIHLHGYDFYILAEGFGNFDAXADTASFNMDDPPMRNTVGVPVNGWAVIRFVADNPGX 180
NHPIHLHGYDFYI+A+GFGN++ D + FN+ DPP+RNTV VPVNGWAVIRFVADNPG
Sbjct: 124 NHPIHLHGYDFYIIAQGFGNYNPRTDPSKFNLVDPPLRNTVAVPVNGWAVIRFVADNPGV 303
Query: 181 XLMHCHLDVHITWGLAMAFLVEDGVGEMQSLEAXXXDXXIC* 306
LMHCHLDVHITWGLA AFLVE+GVG++QS+E+ D +C*
Sbjct: 304 WLMHCHLDVHITWGLATAFLVENGVGQLQSIESPPEDLPLC* 429
Score = 131 bits (281), Expect = 2e-030
Identities = 57/91 (62%), Positives = 62/91 (68%)
Frame = -2 / -1
Query: 275 SSDCISPTPSSTRNAMARPQVMCTSRWQCMSXXPGLSATKRMTAQPLTGTPTVFLMGGSS 96
S DC PTP ST+ A+ARPQVM TSRWQC+S PGLSAT RMTA P TGT TVFL GGS+
Sbjct: 398 SMDCNCPTPFSTKKAVARPQVMWTSRWQCISQTPGLSATNRMTAHPFTGTATVFLRGGST 219
Query: 95 MLKLAVSAXASKLPKPSARM*KS*PWRWMGW 3
L S P P A M*KS P RW+GW
Sbjct: 218 RLNFDGSVRGL*FPNPCAIM*KSYP*RWIGW 126
>gb|CV231087.1|CV231087 WS0193.B21_I04 PT-DX-N-A-10 Populus trichocarpa cDNA clone
WS0193_I04 3', mRNA sequence
Length = 685
Score = 197 bits (425), Expect = 3e-050
Identities = 74/102 (72%), Positives = 87/102 (85%)
Frame = +1 / -2
Query: 1 NHPIHLHGYDFYILAEGFGNFDAXADTASFNMDDPPMRNTVGVPVNGWAVIRFVADNPGX 180
NHPIHLHGYDFYI+A+GFGN++ D + FN+ DPP+RNTV VPVNGWAVIRFVADNPG
Sbjct: 510 NHPIHLHGYDFYIIAQGFGNYNPRTDPSKFNLVDPPLRNTVAVPVNGWAVIRFVADNPGV 331
Query: 181 XLMHCHLDVHITWGLAMAFLVEDGVGEMQSLEAXXXDXXIC* 306
LMHCHLDVHITWGLA AFLVE+GVG++QS+E+ D +C*
Sbjct: 330 WLMHCHLDVHITWGLATAFLVENGVGQLQSIESPPEDLPLC* 205
Score = 131 bits (281), Expect = 2e-030
Identities = 57/91 (62%), Positives = 62/91 (68%)
Frame = -2 / +2
Query: 275 SSDCISPTPSSTRNAMARPQVMCTSRWQCMSXXPGLSATKRMTAQPLTGTPTVFLMGGSS 96
S DC PTP ST+ A+ARPQVM TSRWQC+S PGLSAT RMTA P TGT TVFL GGS+
Sbjct: 236 SMDCNCPTPFSTKKAVARPQVMWTSRWQCISHTPGLSATNRMTAHPFTGTATVFLRGGST 415
Query: 95 MLKLAVSAXASKLPKPSARM*KS*PWRWMGW 3
L S P P A M*KS P RW+GW
Sbjct: 416 RLNFDGSVRGL*FPNPCAIM*KSYP*RWIGW 508
>emb|Y18219.1|PTR18219 Populus trichocarpa GLac90 gene
Length = 2767
Score = 129 bits (277), Expect(2) = 1e-048
Identities = 48/59 (81%), Positives = 52/59 (88%)
Frame = +1 / +1
Query: 1 NHPIHLHGYDFYILAEGFGNFDAXADTASFNMDDPPMRNTVGVPVNGWAVIRFVADNPG 177
NHPIHLHGYDFYI+AEGFGNF+ D + FN+ DPPMRNTV VPVNGWAVIRFVADNPG
Sbjct: 2197 NHPIHLHGYDFYIIAEGFGNFNPKTDKSKFNLVDPPMRNTVAVPVNGWAVIRFVADNPG 2373
Score = 91.3 bits (193), Expect(2) = 9e-028
Identities = 37/58 (63%), Positives = 42/58 (72%)
Frame = -2 / -3
Query: 176 PGLSATKRMTAQPLTGTPTVFLMGGSSMLKLAVSAXASKLPKPSARM*KS*PWRWMGW 3
PGLSAT +TA P TGT TVFL+GGS+ L L +S K P PSA M*KS PWRW+GW
Sbjct: 2372 PGLSATNLITAHPFTGTATVFLIGGSTRLNLDLSVLGLKFPNPSAMM*KSYPWRWIGW 2199
Score = 82.6 bits (174), Expect(2) = 1e-048
Identities = 34/51 (66%), Positives = 39/51 (76%)
Frame = +1 / +2
Query: 175 GXXLMHCHLDVHITWGLAMAFLVEDGVGEMQSLEAXXXDXXIC*LILVLHR 327
G LMHCHLDVHITWGLAMAFLVE+G+G +QS+E D IC*LI + R
Sbjct: 2459 GVWLMHCHLDVHITWGLAMAFLVEEGIGILQSVEPPPADLPIC*LISIHKR 2611
Score = 51.0 bits (105), Expect(2) = 9e-028
Identities = 23/46 (50%), Positives = 30/46 (65%)
Frame = -2 / -2
Query: 311 MS*QMXXSXXXASSDCISPTPSSTRNAMARPQVMCTSRWQCMSXXP 174
++* + S S+ C P PSST+NAMARP VM TS+ QC+S P
Sbjct: 2595 IN*HIGRSAGGGSTLCKIPIPSSTKNAMARPHVM*TSK*QCISHTP 2458
>gb|CV226588.1|CV226588 WS0164.B21_L12 PT-DX-A-7 Populus trichocarpa cDNA clone WS0164_L12
3', mRNA sequence
Length = 521
Score = 187 bits (403), Expect = 3e-047
Identities = 70/99 (70%), Positives = 84/99 (84%)
Frame = +1 / -1
Query: 10 IHLHGYDFYILAEGFGNFDAXADTASFNMDDPPMRNTVGVPVNGWAVIRFVADNPGXXLM 189
+HLHGYDFYI+A+GFGN++ D + FN+ DPP+RNTV VPVNGWAVIRFVADNPG LM
Sbjct: 521 VHLHGYDFYIIAQGFGNYNPRTDPSKFNLVDPPLRNTVAVPVNGWAVIRFVADNPGVWLM 342
Query: 190 HCHLDVHITWGLAMAFLVEDGVGEMQSLEAXXXDXXIC* 306
HCHLDVHITWGLA AFLVE+GVG++QS+E+ D +C*
Sbjct: 341 HCHLDVHITWGLATAFLVENGVGQLQSIESPPEDLPLC* 225
Score = 123 bits (263), Expect = 6e-028
Identities = 55/88 (62%), Positives = 59/88 (67%)
Frame = -2 / +1
Query: 275 SSDCISPTPSSTRNAMARPQVMCTSRWQCMSXXPGLSATKRMTAQPLTGTPTVFLMGGSS 96
S DC PTP ST+ A+ARPQVM TSRWQC+S PGLSAT RMTA P TGT TVFL GGS+
Sbjct: 256 SMDCNCPTPFSTKKAVARPQVMWTSRWQCISHTPGLSATNRMTAHPFTGTATVFLRGGST 435
Query: 95 MLKLAVSAXASKLPKPSARM*KS*PWRW 12
L S P P A M*KS P RW
Sbjct: 436 RLNFDGSVRGL*FPNPCAIM*KSYP*RW 519
>gb|CX176697.1|CX176697 F07_69-71_11.ab1 leaf inoculated with Marssonia pathogen of Populus
deltoides Populus deltoides cDNA, mRNA sequence
Length = 691
Score = 125 bits (268), Expect(2) = 6e-046
Identities = 45/59 (76%), Positives = 52/59 (88%)
Frame = +1 / -2
Query: 1 NHPIHLHGYDFYILAEGFGNFDAXADTASFNMDDPPMRNTVGVPVNGWAVIRFVADNPG 177
NHPIHLHGYDFYI+A+GFGN++ D + FN+ DPP+RNTV VPVNGWAVIRFVADNPG
Sbjct: 639 NHPIHLHGYDFYIIAQGFGNYNPRTDPSKFNLVDPPLRNTVAVPVNGWAVIRFVADNPG 463
Score = 78.5 bits (165), Expect(2) = 1e-026
Identities = 35/58 (60%), Positives = 37/58 (63%)
Frame = -2 / +2
Query: 176 PGLSATKRMTAQPLTGTPTVFLMGGSSMLKLAVSAXASKLPKPSARM*KS*PWRWMGW 3
PGLSAT RMTA P TGT TVFL GGS+ L S P P A M*KS P RW+GW
Sbjct: 464 PGLSATNRMTAHPFTGTATVFLRGGSTRLNFDGSVRGL*FPNPCAMM*KSYP*RWIGW 637
Score = 77.6 bits (163), Expect(2) = 6e-046
Identities = 30/44 (68%), Positives = 36/44 (81%)
Frame = +1 / -2
Query: 175 GXXLMHCHLDVHITWGLAMAFLVEDGVGEMQSLEAXXXDXXIC* 306
G LMHCHLDVHITWGLA AFLVE+GVG++QS+E+ D +C*
Sbjct: 363 GVWLMHCHLDVHITWGLATAFLVENGVGQLQSIESPPEDLPLC* 232
Score = 60.2 bits (125), Expect(2) = 1e-026
Identities = 23/34 (67%), Positives = 26/34 (76%)
Frame = -2 / +2
Query: 275 SSDCISPTPSSTRNAMARPQVMCTSRWQCMSXXP 174
S DC PTP ST+ A+ARPQVM TSRWQC+S P
Sbjct: 263 SMDCNCPTPFSTKKAVARPQVMWTSRWQCISHTP 364
>gb|CX169905.1|CX169905 A08_69-110_02.ab1 leaf inoculated with Marssonia pathogen of
Populus deltoides Populus deltoides cDNA, mRNA sequence
Length = 650
Score = 119 bits (254), Expect(2) = 5e-044
Identities = 43/57 (75%), Positives = 50/57 (87%)
Frame = +1 / -1
Query: 7 PIHLHGYDFYILAEGFGNFDAXADTASFNMDDPPMRNTVGVPVNGWAVIRFVADNPG 177
PIHLHGYDFYI+A+GFGN++ D + FN+ DPP+RNTV VPVNGWAVIRFVADNPG
Sbjct: 650 PIHLHGYDFYIIAQGFGNYNPRTDPSKFNLVDPPLRNTVAVPVNGWAVIRFVADNPG 480
Score = 77.6 bits (163), Expect(2) = 5e-044
Identities = 30/44 (68%), Positives = 36/44 (81%)
Frame = +1 / -1
Query: 175 GXXLMHCHLDVHITWGLAMAFLVEDGVGEMQSLEAXXXDXXIC* 306
G LMHCHLDVHITWGLA AFLVE+GVG++QS+E+ D +C*
Sbjct: 380 GVWLMHCHLDVHITWGLATAFLVENGVGQLQSIESPPEDLPLC* 249
Score = 70.7 bits (148), Expect(2) = 2e-024
Identities = 33/56 (58%), Positives = 35/56 (62%)
Frame = -2 / +1
Query: 176 PGLSATKRMTAQPLTGTPTVFLMGGSSMLKLAVSAXASKLPKPSARM*KS*PWRWM 9
PGLSAT RMTA P TGT TVFL GGS+ L S P P A M*KS P RW+
Sbjct: 481 PGLSATNRMTAHPFTGTATVFLRGGSTRLNFDGSVRGL*FPNPCAMM*KSYP*RWI 648
Score = 60.2 bits (125), Expect(2) = 2e-024
Identities = 23/34 (67%), Positives = 26/34 (76%)
Frame = -2 / +1
Query: 275 SSDCISPTPSSTRNAMARPQVMCTSRWQCMSXXP 174
S DC PTP ST+ A+ARPQVM TSRWQC+S P
Sbjct: 280 SMDCNCPTPFSTKKAVARPQVMWTSRWQCISHTP 381
>gb|CV252346.1|CV252346 PX0011.B21_G09 PT-X-FL-A-1 Populus trichocarpa cDNA clone
PX0011_G09 3', mRNA sequence
Length = 572
Score = 171 bits (368), Expect = 2e-042
Identities = 69/97 (71%), Positives = 78/97 (80%)
Frame = +1 / -1
Query: 37 ILAEGFGNFDAXADTASFNMDDPPMRNTVGVPVNGWAVIRFVADNPGXXLMHCHLDVHIT 216
I+AEGFGNF+ D + FN+ DPPMRNTV VPVNGWAVIRFVADNPG LMHCHLDVHIT
Sbjct: 572 IIAEGFGNFNPKTDKSKFNLVDPPMRNTVAVPVNGWAVIRFVADNPGVWLMHCHLDVHIT 393
Query: 217 WGLAMAFLVEDGVGEMQSLEAXXXDXXIC*LILVLHR 327
WGLAMAFLVE+G+G +QS+E D IC*LI + R
Sbjct: 392 WGLAMAFLVEEGIGILQSVEPPPADLPIC*LISIHKR 282
Score = 107 bits (229), Expect = 3e-023
Identities = 49/90 (54%), Positives = 60/90 (66%)
Frame = -2 / +1
Query: 311 MS*QMXXSXXXASSDCISPTPSSTRNAMARPQVMCTSRWQCMSXXPGLSATKRMTAQPLT 132
++* + S S+ C P PSST+NAMARP VM TS+ QC+S PGLSAT +TA P T
Sbjct: 298 IN*HIGRSAGGGSTLCKIPIPSSTKNAMARPHVM*TSK*QCISHTPGLSATNLITAHPFT 477
Query: 131 GTPTVFLMGGSSMLKLAVSAXASKLPKPSA 42
GT TVFL+GGS+ L L +S K P PSA
Sbjct: 478 GTATVFLIGGSTRLNLDLSVLGLKFPNPSA 567
>gb|CV269060.1|CV269060 WS0207.B21_D13 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS0207_D13 3', mRNA sequence
Length = 765
Score = 161 bits (346), Expect = 2e-039
Identities = 60/102 (58%), Positives = 75/102 (73%)
Frame = +1 / -1
Query: 1 NHPIHLHGYDFYILAEGFGNFDAXADTASFNMDDPPMRNTVGVPVNGWAVIRFVADNPGX 180
+HP+HLHG++F ++ GFGNF+ D A FN+ +PP RNT+G P GW IRFVADNPG
Sbjct: 567 DHPMHLHGHNFAVVGSGFGNFNPQTDPAKFNLINPPYRNTIGNPPGGWVAIRFVADNPGI 388
Query: 181 XLMHCHLDVHITWGLAMAFLVEDGVGEMQSLEAXXXDXXIC* 306
LMHCHLD H+ WGLAMAFLVE+GVG +QS++ D C*
Sbjct: 387 WLMHCHLDSHLNWGLAMAFLVENGVGNLQSVQPPPLDLPQC* 262
Score = 107 bits (228), Expect = 4e-023
Identities = 48/96 (50%), Positives = 55/96 (57%)
Frame = -2 / +2
Query: 290 SXXXASSDCISPTPSSTRNAMARPQVMCTSRWQCMSXXPGLSATKRMTAQPLTGTPTVFL 111
S +DC PTP ST+ A+ARPQ+ C SR QC++ PGLSAT RM P G P VFL
Sbjct: 278 SSGGGCTDCKLPTPFSTKKAIARPQLRCESR*QCINQIPGLSATNRMATHPPGGFPMVFL 457
Query: 110 MGGSSMLKLAVSAXASKLPKPSARM*KS*PWRWMGW 3
GG L A S KLPKP K PWR +GW
Sbjct: 458 YGGLMRLNFAGSV*GLKLPKPDPTTAKLCPWRCIGW 565
>gb|CF232187.1|CF232187 PtaJXO0007D8D0808 Poplar cDNA library from young opposite xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 485
Score = 156 bits (335), Expect = 7e-038
Identities = 60/86 (69%), Positives = 70/86 (81%)
Frame = +1 / +3
Query: 49 GFGNFDAXADTASFNMDDPPMRNTVGVPVNGWAVIRFVADNPGXXLMHCHLDVHITWGLA 228
GFGN++ D + FN+ DPP+RNTV VPVNGWAVIRFVADNPG LMHCHLDVHITWGLA
Sbjct: 3 GFGNYNPRTDPSKFNLVDPPLRNTVAVPVNGWAVIRFVADNPGVWLMHCHLDVHITWGLA 182
Query: 229 MAFLVEDGVGEMQSLEAXXXDXXIC* 306
AFLVE+G GE+QS+E+ D +C*
Sbjct: 183 TAFLVENGAGELQSIESPPEDLPLC* 260
Score = 111 bits (237), Expect = 2e-024
Identities = 48/76 (63%), Positives = 52/76 (68%)
Frame = -2 / -2
Query: 275 SSDCISPTPSSTRNAMARPQVMCTSRWQCMSXXPGLSATKRMTAQPLTGTPTVFLMGGSS 96
S DC SP P ST+ A+ARPQVM TSRWQC+S PGLSAT RMTA P TGT TVFL GGS+
Sbjct: 229 SMDCNSPAPFSTKKAVARPQVMWTSRWQCISHTPGLSATNRMTAHPFTGTATVFLRGGST 50
Query: 95 MLKLAVSAXASKLPKP 48
L S LP P
Sbjct: 49 RLNFDGSVRGL*LPNP 2
>gb|CV231858.1|CV231858 WS0195.B21_M10 PT-DX-N-A-10 Populus trichocarpa cDNA clone
WS0195_M10 3', mRNA sequence
Length = 754
Score = 151 bits (325), Expect = 2e-036
Identities = 58/130 (44%), Positives = 80/130 (61%)
Frame = +1 / -2
Query: 1 NHPIHLHGYDFYILAEGFGNFDAXADTASFNMDDPPMRNTVGVPVNGWAVIRFVADNPGX 180
+HP+HLHG++F+++ +GFGN+D D ++FN+ DP RNT GVP GW IRF+ADNPG
Sbjct: 615 SHPLHLHGFNFFVVGQGFGNYDPNKDPSNFNLVDPMERNTAGVPAGGWIAIRFLADNPGV 436
Query: 181 XLMHCHLDVHITWGLAMAFLVEDGVGEMQSLEAXXXDXXIC*LILVLHRGXXLIYYAXXX 360
MHCHLDVH +WGL MA++V DG Q + D C*L L+ R + +
Sbjct: 435 WFMHCHLDVHTSWGLRMAWIVLDGPQPNQKIPPPPSDLPKC*LWLITGRHTIIYEFLFLM 256
Query: 361 XXNILXXXXF 390
N++ F
Sbjct: 255 PCNLIIMRFF 226
Score = 101 bits (215), Expect = 2e-021
Identities = 45/82 (54%), Positives = 52/82 (63%)
Frame = -2 / +2
Query: 251 PSSTRNAMARPQVMCTSRWQCMSXXPGLSATKRMTAQPLTGTPTVFLMGGSSMLKLAVSA 72
PS T +A+ PQ++CTSRWQCM+ PGLSA KR+ QP GTP VFL GS+ LKL S
Sbjct: 365 PSKTIHAIRSPQLVCTSRWQCMNHTPGLSARKRIAIQPPAGTPAVFLSIGSTRLKLEGSL 544
Query: 71 XASKLPKPSARM*KS*PWRWMG 6
S LPKP K P RW G
Sbjct: 545 LGS*LPKPCPTTKKLKPCRWSG 610
>emb|Y13773.1|PTY13773 Populus trichocarpa mRNA for laccase, lac110 gene
Length = 2109
Score = 151 bits (325), Expect = 2e-036
Identities = 58/130 (44%), Positives = 80/130 (61%)
Frame = +1 / +1
Query: 1 NHPIHLHGYDFYILAEGFGNFDAXADTASFNMDDPPMRNTVGVPVNGWAVIRFVADNPGX 180
+HP+HLHG++F+++ +GFGN+D D ++FN+ DP RNT GVP GW IRF+ADNPG
Sbjct: 1507 SHPLHLHGFNFFVVGQGFGNYDPNKDPSNFNLVDPMERNTAGVPAGGWIAIRFLADNPGV 1686
Query: 181 XLMHCHLDVHITWGLAMAFLVEDGVGEMQSLEAXXXDXXIC*LILVLHRGXXLIYYAXXX 360
MHCHLDVH +WGL MA++V DG Q + D C*L L+ R + +
Sbjct: 1687 WFMHCHLDVHTSWGLRMAWIVLDGPQPNQKIPPPPSDLPKC*LWLITGRHTIIYEFLFLM 1866
Query: 361 XXNILXXXXF 390
N++ F
Sbjct: 1867 PCNLIIMRFF 1896
Score = 101 bits (215), Expect = 2e-021
Identities = 45/82 (54%), Positives = 52/82 (63%)
Frame = -2 / -2
Query: 251 PSSTRNAMARPQVMCTSRWQCMSXXPGLSATKRMTAQPLTGTPTVFLMGGSSMLKLAVSA 72
PS T +A+ PQ++CTSRWQCM+ PGLSA KR+ QP GTP VFL GS+ LKL S
Sbjct: 1757 PSKTIHAIRSPQLVCTSRWQCMNHTPGLSARKRIAIQPPAGTPAVFLSIGSTRLKLEGSL 1578
Query: 71 XASKLPKPSARM*KS*PWRWMG 6
S LPKP K P RW G
Sbjct: 1577 LGS*LPKPCPTTKKLKPCRWSG 1512
>gb|AI166300.1|AI166300 xylem.est.146 Poplar xylem Lambda ZAPII library Populus trichocarpa
cDNA 5', mRNA sequence
Length = 544
Score = 151 bits (324), Expect = 2e-036
Identities = 58/105 (55%), Positives = 71/105 (67%)
Frame = +1 / +2
Query: 1 NHPIHLHGYDFYILAEGFGNFDAXADTASFNMDDPPMRNTVGVPVNGWAVIRFVADNPGX 180
+HP+HLHG++FY++ EGFGNFD D +FN+ DP RNTVGVP GW IRF ADNPG
Sbjct: 152 SHPLHLHGFNFYVVGEGFGNFDPNNDPKNFNLVDPVERNTVGVPSGGWVAIRFHADNPGV 331
Query: 181 XLMHCHLDVHITWGLAMAFLVEDGVGEMQSLEAXXXDXXIC*LIL 315
MHCH DVH++WGL MA++V DG Q L D C* +L
Sbjct: 332 WFMHCHFDVHLSWGLRMAWIVLDGTLPSQKLPPPPSDLPKC*TML 466
Score = 113 bits (242), Expect = 5e-025
Identities = 46/87 (52%), Positives = 55/87 (63%)
Frame = -2 / -2
Query: 263 ISPTPSSTRNAMARPQVMCTSRWQCMSXXPGLSATKRMTAQPLTGTPTVFLMGGSSMLKL 84
+ PS T +A+ PQ+ CTS+WQC++ PGLSA KR+ QP GTPTVFL GS+ LK
Sbjct: 414 LGSVPSKTIHAILNPQLKCTSKWQCINHTPGLSA*KRIATQPPEGTPTVFLSTGSTRLKF 235
Query: 83 AVSAXASKLPKPSARM*KS*PWRWMGW 3
S SK P PS *K PWRW GW
Sbjct: 234 LGSLFGSKFPNPSPTT*KLKPWRWRGW 154
>gb|AI166389.1|AI166389 xylem.est.226 Poplar xylem Lambda ZAPII library Populus trichocarpa
cDNA 5', mRNA sequence
Length = 505
Score = 151 bits (324), Expect = 2e-036
Identities = 58/105 (55%), Positives = 71/105 (67%)
Frame = +1 / +2
Query: 1 NHPIHLHGYDFYILAEGFGNFDAXADTASFNMDDPPMRNTVGVPVNGWAVIRFVADNPGX 180
+HP+HLHG++FY++ EGFGNFD D +FN+ DP RNTVGVP GW IRF ADNPG
Sbjct: 152 SHPLHLHGFNFYVVGEGFGNFDPNNDPKNFNLVDPVERNTVGVPSGGWVAIRFHADNPGV 331
Query: 181 XLMHCHLDVHITWGLAMAFLVEDGVGEMQSLEAXXXDXXIC*LIL 315
MHCH DVH++WGL MA++V DG Q L D C* +L
Sbjct: 332 WFMHCHFDVHLSWGLRMAWIVLDGTLPSQKLPPPPSDLPKC*TML 466
Score = 113 bits (242), Expect = 5e-025
Identities = 46/87 (52%), Positives = 55/87 (63%)
Frame = -2 / -2
Query: 263 ISPTPSSTRNAMARPQVMCTSRWQCMSXXPGLSATKRMTAQPLTGTPTVFLMGGSSMLKL 84
+ PS T +A+ PQ+ CTS+WQC++ PGLSA KR+ QP GTPTVFL GS+ LK
Sbjct: 414 LGSVPSKTIHAILNPQLKCTSKWQCINHTPGLSA*KRIATQPPEGTPTVFLSTGSTRLKF 235
Query: 83 AVSAXASKLPKPSARM*KS*PWRWMGW 3
S SK P PS *K PWRW GW
Sbjct: 234 LGSLFGSKFPNPSPTT*KLKPWRWRGW 154
>gb|AI166460.1|AI166460 xylem.est.290 Poplar xylem Lambda ZAPII library Populus trichocarpa
cDNA 5', mRNA sequence
Length = 715
Score = 151 bits (324), Expect = 2e-036
Identities = 58/105 (55%), Positives = 71/105 (67%)
Frame = +1 / +2
Query: 1 NHPIHLHGYDFYILAEGFGNFDAXADTASFNMDDPPMRNTVGVPVNGWAVIRFVADNPGX 180
+HP+HLHG++FY++ EGFGNFD D +FN+ DP RNTVGVP GW IRF ADNPG
Sbjct: 152 SHPLHLHGFNFYVVGEGFGNFDPNNDPKNFNLVDPVERNTVGVPSGGWVAIRFHADNPGV 331
Query: 181 XLMHCHLDVHITWGLAMAFLVEDGVGEMQSLEAXXXDXXIC*LIL 315
MHCH DVH++WGL MA++V DG Q L D C* +L
Sbjct: 332 WFMHCHFDVHLSWGLRMAWIVLDGTLPSQKLPPPPSDLPKC*TML 466
Score = 113 bits (242), Expect = 5e-025
Identities = 46/87 (52%), Positives = 55/87 (63%)
Frame = -2 / -2
Query: 263 ISPTPSSTRNAMARPQVMCTSRWQCMSXXPGLSATKRMTAQPLTGTPTVFLMGGSSMLKL 84
+ PS T +A+ PQ+ CTS+WQC++ PGLSA KR+ QP GTPTVFL GS+ LK
Sbjct: 414 LGSVPSKTIHAILNPQLKCTSKWQCINHTPGLSA*KRIATQPPEGTPTVFLSTGSTRLKF 235
Query: 83 AVSAXASKLPKPSARM*KS*PWRWMGW 3
S SK P PS *K PWRW GW
Sbjct: 234 LGSLFGSKFPNPSPTT*KLKPWRWRGW 154
>gb|AI166520.1|AI166520 xylem.est.344 Poplar xylem Lambda ZAPII library Populus trichocarpa
cDNA 5', mRNA sequence
Length = 613
Score = 151 bits (324), Expect = 2e-036
Identities = 58/105 (55%), Positives = 71/105 (67%)
Frame = +1 / +2
Query: 1 NHPIHLHGYDFYILAEGFGNFDAXADTASFNMDDPPMRNTVGVPVNGWAVIRFVADNPGX 180
+HP+HLHG++FY++ EGFGNFD D +FN+ DP RNTVGVP GW IRF ADNPG
Sbjct: 152 SHPLHLHGFNFYVVGEGFGNFDPNNDPKNFNLVDPVERNTVGVPSGGWVAIRFHADNPGV 331
Query: 181 XLMHCHLDVHITWGLAMAFLVEDGVGEMQSLEAXXXDXXIC*LIL 315
MHCH DVH++WGL MA++V DG Q L D C* +L
Sbjct: 332 WFMHCHFDVHLSWGLRMAWIVLDGTLPSQKLPPPPSDLPKC*TML 466
Score = 113 bits (242), Expect = 5e-025
Identities = 46/87 (52%), Positives = 55/87 (63%)
Frame = -2 / -2
Query: 263 ISPTPSSTRNAMARPQVMCTSRWQCMSXXPGLSATKRMTAQPLTGTPTVFLMGGSSMLKL 84
+ PS T +A+ PQ+ CTS+WQC++ PGLSA KR+ QP GTPTVFL GS+ LK
Sbjct: 414 LGSVPSKTIHAILNPQLKCTSKWQCINHTPGLSA*KRIATQPPEGTPTVFLSTGSTRLKF 235
Query: 83 AVSAXASKLPKPSARM*KS*PWRWMGW 3
S SK P PS *K PWRW GW
Sbjct: 234 LGSLFGSKFPNPSPTT*KLKPWRWRGW 154
>gb|AI166601.1|AI166601 xylem.est.417 Poplar xylem Lambda ZAPII library Populus trichocarpa
cDNA 5', mRNA sequence
Length = 683
Score = 151 bits (324), Expect = 2e-036
Identities = 58/105 (55%), Positives = 71/105 (67%)
Frame = +1 / +1
Query: 1 NHPIHLHGYDFYILAEGFGNFDAXADTASFNMDDPPMRNTVGVPVNGWAVIRFVADNPGX 180
+HP+HLHG++FY++ EGFGNFD D +FN+ DP RNTVGVP GW IRF ADNPG
Sbjct: 151 SHPLHLHGFNFYVVGEGFGNFDPNNDPKNFNLVDPVERNTVGVPSGGWVAIRFHADNPGV 330
Query: 181 XLMHCHLDVHITWGLAMAFLVEDGVGEMQSLEAXXXDXXIC*LIL 315
MHCH DVH++WGL MA++V DG Q L D C* +L
Sbjct: 331 WFMHCHFDVHLSWGLRMAWIVLDGTLPSQKLPPPPSDLPKC*TML 465
Score = 113 bits (242), Expect = 5e-025
Identities = 46/87 (52%), Positives = 55/87 (63%)
Frame = -2 / -1
Query: 263 ISPTPSSTRNAMARPQVMCTSRWQCMSXXPGLSATKRMTAQPLTGTPTVFLMGGSSMLKL 84
+ PS T +A+ PQ+ CTS+WQC++ PGLSA KR+ QP GTPTVFL GS+ LK
Sbjct: 413 LGSVPSKTIHAILNPQLKCTSKWQCINHTPGLSA*KRIATQPPEGTPTVFLSTGSTRLKF 234
Query: 83 AVSAXASKLPKPSARM*KS*PWRWMGW 3
S SK P PS *K PWRW GW
Sbjct: 233 LGSLFGSKFPNPSPTT*KLKPWRWRGW 153
>gb|AI166632.1|AI166632 xylem.est.445 Poplar xylem Lambda ZAPII library Populus trichocarpa
cDNA 5', mRNA sequence
Length = 535
Score = 151 bits (324), Expect = 2e-036
Identities = 58/105 (55%), Positives = 71/105 (67%)
Frame = +1 / +2
Query: 1 NHPIHLHGYDFYILAEGFGNFDAXADTASFNMDDPPMRNTVGVPVNGWAVIRFVADNPGX 180
+HP+HLHG++FY++ EGFGNFD D +FN+ DP RNTVGVP GW IRF ADNPG
Sbjct: 152 SHPLHLHGFNFYVVGEGFGNFDPNNDPKNFNLVDPVERNTVGVPSGGWVAIRFHADNPGV 331
Query: 181 XLMHCHLDVHITWGLAMAFLVEDGVGEMQSLEAXXXDXXIC*LIL 315
MHCH DVH++WGL MA++V DG Q L D C* +L
Sbjct: 332 WFMHCHFDVHLSWGLRMAWIVLDGTLPSQKLPPPPSDLPKC*TML 466
Score = 113 bits (242), Expect = 5e-025
Identities = 46/87 (52%), Positives = 55/87 (63%)
Frame = -2 / -2
Query: 263 ISPTPSSTRNAMARPQVMCTSRWQCMSXXPGLSATKRMTAQPLTGTPTVFLMGGSSMLKL 84
+ PS T +A+ PQ+ CTS+WQC++ PGLSA KR+ QP GTPTVFL GS+ LK
Sbjct: 414 LGSVPSKTIHAILNPQLKCTSKWQCINHTPGLSA*KRIATQPPEGTPTVFLSTGSTRLKF 235
Query: 83 AVSAXASKLPKPSARM*KS*PWRWMGW 3
S SK P PS *K PWRW GW
Sbjct: 234 LGSLFGSKFPNPSPTT*KLKPWRWRGW 154
>gb|AI166804.1|AI166804 xylem.est.60 Poplar xylem Lambda ZAPII library Populus trichocarpa
cDNA 5', mRNA sequence
Length = 537
Score = 151 bits (324), Expect = 2e-036
Identities = 58/105 (55%), Positives = 71/105 (67%)
Frame = +1 / +2
Query: 1 NHPIHLHGYDFYILAEGFGNFDAXADTASFNMDDPPMRNTVGVPVNGWAVIRFVADNPGX 180
+HP+HLHG++FY++ EGFGNFD D +FN+ DP RNTVGVP GW IRF ADNPG
Sbjct: 152 SHPLHLHGFNFYVVGEGFGNFDPNNDPKNFNLVDPVERNTVGVPSGGWVAIRFHADNPGV 331
Query: 181 XLMHCHLDVHITWGLAMAFLVEDGVGEMQSLEAXXXDXXIC*LIL 315
MHCH DVH++WGL MA++V DG Q L D C* +L
Sbjct: 332 WFMHCHFDVHLSWGLRMAWIVLDGTLPSQKLPPPPSDLPKC*TML 466
Score = 113 bits (242), Expect = 5e-025
Identities = 46/87 (52%), Positives = 55/87 (63%)
Frame = -2 / -1
Query: 263 ISPTPSSTRNAMARPQVMCTSRWQCMSXXPGLSATKRMTAQPLTGTPTVFLMGGSSMLKL 84
+ PS T +A+ PQ+ CTS+WQC++ PGLSA KR+ QP GTPTVFL GS+ LK
Sbjct: 414 LGSVPSKTIHAILNPQLKCTSKWQCINHTPGLSA*KRIATQPPEGTPTVFLSTGSTRLKF 235
Query: 83 AVSAXASKLPKPSARM*KS*PWRWMGW 3
S SK P PS *K PWRW GW
Sbjct: 234 LGSLFGSKFPNPSPTT*KLKPWRWRGW 154
>gb|AI167056.1|AI167056 xylem.est.827 Poplar xylem Lambda ZAPII library Populus trichocarpa
cDNA 5', mRNA sequence
Length = 536
Score = 151 bits (324), Expect = 2e-036
Identities = 58/105 (55%), Positives = 71/105 (67%)
Frame = +1 / +2
Query: 1 NHPIHLHGYDFYILAEGFGNFDAXADTASFNMDDPPMRNTVGVPVNGWAVIRFVADNPGX 180
+HP+HLHG++FY++ EGFGNFD D +FN+ DP RNTVGVP GW IRF ADNPG
Sbjct: 152 SHPLHLHGFNFYVVGEGFGNFDPNNDPKNFNLVDPVERNTVGVPSGGWVAIRFHADNPGV 331
Query: 181 XLMHCHLDVHITWGLAMAFLVEDGVGEMQSLEAXXXDXXIC*LIL 315
MHCH DVH++WGL MA++V DG Q L D C* +L
Sbjct: 332 WFMHCHFDVHLSWGLRMAWIVLDGTLPSQKLPPPPSDLPKC*TML 466
Score = 113 bits (242), Expect = 5e-025
Identities = 46/87 (52%), Positives = 55/87 (63%)
Frame = -2 / -3
Query: 263 ISPTPSSTRNAMARPQVMCTSRWQCMSXXPGLSATKRMTAQPLTGTPTVFLMGGSSMLKL 84
+ PS T +A+ PQ+ CTS+WQC++ PGLSA KR+ QP GTPTVFL GS+ LK
Sbjct: 414 LGSVPSKTIHAILNPQLKCTSKWQCINHTPGLSA*KRIATQPPEGTPTVFLSTGSTRLKF 235
Query: 83 AVSAXASKLPKPSARM*KS*PWRWMGW 3
S SK P PS *K PWRW GW
Sbjct: 234 LGSLFGSKFPNPSPTT*KLKPWRWRGW 154
>gb|AI167062.1|AI167062 xylem.est.832 Poplar xylem Lambda ZAPII library Populus trichocarpa
cDNA 5', mRNA sequence
Length = 587
Score = 151 bits (324), Expect = 2e-036
Identities = 58/105 (55%), Positives = 71/105 (67%)
Frame = +1 / +2
Query: 1 NHPIHLHGYDFYILAEGFGNFDAXADTASFNMDDPPMRNTVGVPVNGWAVIRFVADNPGX 180
+HP+HLHG++FY++ EGFGNFD D +FN+ DP RNTVGVP GW IRF ADNPG
Sbjct: 152 SHPLHLHGFNFYVVGEGFGNFDPNNDPKNFNLVDPVERNTVGVPSGGWVAIRFHADNPGV 331
Query: 181 XLMHCHLDVHITWGLAMAFLVEDGVGEMQSLEAXXXDXXIC*LIL 315
MHCH DVH++WGL MA++V DG Q L D C* +L
Sbjct: 332 WFMHCHFDVHLSWGLRMAWIVLDGTLPSQKLPPPPSDLPKC*TML 466
Score = 113 bits (242), Expect = 5e-025
Identities = 46/87 (52%), Positives = 55/87 (63%)
Frame = -2 / -3
Query: 263 ISPTPSSTRNAMARPQVMCTSRWQCMSXXPGLSATKRMTAQPLTGTPTVFLMGGSSMLKL 84
+ PS T +A+ PQ+ CTS+WQC++ PGLSA KR+ QP GTPTVFL GS+ LK
Sbjct: 414 LGSVPSKTIHAILNPQLKCTSKWQCINHTPGLSA*KRIATQPPEGTPTVFLSTGSTRLKF 235
Query: 83 AVSAXASKLPKPSARM*KS*PWRWMGW 3
S SK P PS *K PWRW GW
Sbjct: 234 LGSLFGSKFPNPSPTT*KLKPWRWRGW 154
>gb|CK093471.1|CK093471 G121P41.3pR Populus tension wood cDNA library Populus tremula x
Populus tremuloides cDNA clone G121P41 3', mRNA sequence
Length = 807
Score = 151 bits (324), Expect = 2e-036
Identities = 58/107 (54%), Positives = 72/107 (67%)
Frame = +1 / -2
Query: 1 NHPIHLHGYDFYILAEGFGNFDAXADTASFNMDDPPMRNTVGVPVNGWAVIRFVADNPGX 180
+HP+HLHG++FY++ EGFGNFD D +FN+ DP RNTVGVP GW IRF ADNPG
Sbjct: 593 SHPLHLHGFNFYVVGEGFGNFDPNNDPKNFNLVDPVERNTVGVPTAGWVAIRFHADNPGV 414
Query: 181 XLMHCHLDVHITWGLAMAFLVEDGVGEMQSLEAXXXDXXIC*LILVL 321
MHCH DVH++WGL MA++V DG Q L D C* +L +
Sbjct: 413 WFMHCHFDVHLSWGLRMAWIVLDGTLPSQKLPPPPSDLPKC*PMLAM 273
Score = 103 bits (219), Expect = 7e-022
Identities = 44/87 (50%), Positives = 53/87 (60%)
Frame = -2 / +1
Query: 263 ISPTPSSTRNAMARPQVMCTSRWQCMSXXPGLSATKRMTAQPLTGTPTVFLMGGSSMLKL 84
+ PS T +A+ PQ+ TS+WQC++ PGLSA KR+ QP GTPTVFL GS+ LK
Sbjct: 331 LGSVPSKTIHAILNPQLKWTSKWQCINHTPGLSA*KRIATQPAVGTPTVFLSTGSTRLKF 510
Query: 83 AVSAXASKLPKPSARM*KS*PWRWMGW 3
S SK P PS *K P RW GW
Sbjct: 511 LGSLFGSKFPNPSPTT*KLKP*RWRGW 591
>gb|AI167003.1|AI167003 xylem.est.78 Poplar xylem Lambda ZAPII library Populus trichocarpa
cDNA 5', mRNA sequence
Length = 536
Score = 150 bits (323), Expect = 3e-036
Identities = 58/105 (55%), Positives = 71/105 (67%)
Frame = +1 / +2
Query: 1 NHPIHLHGYDFYILAEGFGNFDAXADTASFNMDDPPMRNTVGVPVNGWAVIRFVADNPGX 180
+HP+HLHG++FY++ EGFGNFD D +FN+ DP RNTVGVP GW IRF ADNPG
Sbjct: 152 SHPLHLHGFNFYVVGEGFGNFDPNNDPKNFNLVDPVERNTVGVPSGGWVAIRFHADNPGV 331
Query: 181 XLMHCHLDVHITWGLAMAFLVEDGVGEMQSLEAXXXDXXIC*LIL 315
MHCH DVH++WGL MA++V DG Q L D C* +L
Sbjct: 332 WXMHCHFDVHLSWGLRMAWIVLDGTLPSQKLPPPPSDLPKC*TML 466
Score = 113 bits (241), Expect = 6e-025
Identities = 46/87 (52%), Positives = 54/87 (62%)
Frame = -2 / -3
Query: 263 ISPTPSSTRNAMARPQVMCTSRWQCMSXXPGLSATKRMTAQPLTGTPTVFLMGGSSMLKL 84
+ PS T +A+ PQ+ CTS+WQC+ PGLSA KR+ QP GTPTVFL GS+ LK
Sbjct: 414 LGSVPSKTIHAILNPQLKCTSKWQCIXHTPGLSA*KRIATQPPEGTPTVFLSTGSTRLKF 235
Query: 83 AVSAXASKLPKPSARM*KS*PWRWMGW 3
S SK P PS *K PWRW GW
Sbjct: 234 LGSLFGSKFPNPSPTT*KLKPWRWRGW 154
>gb|CK093624.1|CK093624 G126P32.3pR Populus tension wood cDNA library Populus tremula x
Populus tremuloides cDNA clone G126P32 3', mRNA sequence
Length = 850
Score = 149 bits (320), Expect = 8e-036
Identities = 57/102 (55%), Positives = 69/102 (67%)
Frame = +1 / -1
Query: 1 NHPIHLHGYDFYILAEGFGNFDAXADTASFNMDDPPMRNTVGVPVNGWAVIRFVADNPGX 180
NHPIHLHG++F+ + G GN++ DT FN+ DP RNT+GVP GW IRF ADNPG
Sbjct: 670 NHPIHLHGFNFFAVGRGVGNYNPKTDTKKFNLVDPVERNTIGVPSGGWVAIRFRADNPGV 491
Query: 181 XLMHCHLDVHITWGLAMAFLVEDGVGEMQSLEAXXXDXXIC* 306
MHCHL+VH TWGL MAFLV++G G +SL D C*
Sbjct: 490 WFMHCHLEVHTTWGLKMAFLVDNGKGPKESLLPPPSDLPKC* 365
>gb|CV230599.1|CV230599 WS0192.B21_A21 PT-DX-N-A-10 Populus trichocarpa cDNA clone
WS0192_A21 3', mRNA sequence
Length = 901
Score = 149 bits (320), Expect = 8e-036
Identities = 57/102 (55%), Positives = 69/102 (67%)
Frame = +1 / +2
Query: 1 NHPIHLHGYDFYILAEGFGNFDAXADTASFNMDDPPMRNTVGVPVNGWAVIRFVADNPGX 180
+HP+HLHG++FY++ EGFGNFD D +FN+ DP RNTVGVP GW IRF ADNPG
Sbjct: 473 SHPLHLHGFNFYVVGEGFGNFDPNNDPKNFNLVDPVERNTVGVPTAGWVAIRFHADNPGV 652
Query: 181 XLMHCHLDVHITWGLAMAFLVEDGVGEMQSLEAXXXDXXIC* 306
MHCH DVH++WGL MA++V DG Q L D C*
Sbjct: 653 WFMHCHFDVHLSWGLRMAWIVLDGTLPSQKLPPPPSDLPKC* 778
Score = 103 bits (219), Expect = 7e-022
Identities = 44/87 (50%), Positives = 53/87 (60%)
Frame = -2 / -2
Query: 263 ISPTPSSTRNAMARPQVMCTSRWQCMSXXPGLSATKRMTAQPLTGTPTVFLMGGSSMLKL 84
+ PS T +A+ PQ+ TS+WQC++ PGLSA KR+ QP GTPTVFL GS+ LK
Sbjct: 735 LGSVPSKTIHAILNPQLKWTSKWQCINHTPGLSA*KRIATQPAVGTPTVFLSTGSTRLKF 556
Query: 83 AVSAXASKLPKPSARM*KS*PWRWMGW 3
S SK P PS *K P RW GW
Sbjct: 555 LGSLFGSKFPNPSPTT*KLKP*RWRGW 475
>gb|CV230947.1|CV230947 WS0193.B21_B09 PT-DX-N-A-10 Populus trichocarpa cDNA clone
WS0193_B09 3', mRNA sequence
Length = 895
Score = 149 bits (320), Expect = 8e-036
Identities = 57/102 (55%), Positives = 69/102 (67%)
Frame = +1 / +1
Query: 1 NHPIHLHGYDFYILAEGFGNFDAXADTASFNMDDPPMRNTVGVPVNGWAVIRFVADNPGX 180
NHPIHLHG++F+ + G GN++ DT FN+ DP RNT+GVP GW IRF ADNPG
Sbjct: 286 NHPIHLHGFNFFAVGRGVGNYNPKTDTKKFNLVDPVERNTIGVPSGGWVAIRFRADNPGV 465
Query: 181 XLMHCHLDVHITWGLAMAFLVEDGVGEMQSLEAXXXDXXIC* 306
MHCHL+VH TWGL MAFLV++G G +SL D C*
Sbjct: 466 WFMHCHLEVHTTWGLKMAFLVDNGKGPKESLLPPPSDLPKC* 591
>gb|CN549675.1|CN549675 GQ0242.B3_G04 GQ024 Populus trichocarpa x Populus deltoides cDNA
clone GQ0242_G04 5', mRNA sequence
Length = 582
Score = 148 bits (318), Expect = 2e-035
Identities = 55/102 (53%), Positives = 69/102 (67%)
Frame = +1 / +1
Query: 1 NHPIHLHGYDFYILAEGFGNFDAXADTASFNMDDPPMRNTVGVPVNGWAVIRFVADNPGX 180
+HP+HLHG++F+++ +GFGNFD D FN+ DP RNTVGVP GW IRF+ADNPG
Sbjct: 34 SHPLHLHGFNFFVVGQGFGNFDPKKDPVKFNLVDPAERNTVGVPSGGWVAIRFLADNPGV 213
Query: 181 XLMHCHLDVHITWGLAMAFLVEDGVGEMQSLEAXXXDXXIC* 306
MHCHL+VH +WGL MA++V DG Q L D C*
Sbjct: 214 WFMHCHLEVHTSWGLKMAWVVNDGKRPSQKLPPPPSDLPKC* 339
>gb|CF230443.1|CF230443 Ptac0008D7D0707 Poplar cDNA library from cambial zone Populus alba
x Populus tremula cDNA 5', mRNA sequence
Length = 649
Score = 148 bits (317), Expect = 2e-035
Identities = 53/91 (58%), Positives = 66/91 (72%)
Frame = +1 / +2
Query: 1 NHPIHLHGYDFYILAEGFGNFDAXADTASFNMDDPPMRNTVGVPVNGWAVIRFVADNPGX 180
+HP+HLHG++F+++ +GFGNFD D FN+ DP RNTVGVP GW IRF+ADNPG
Sbjct: 371 SHPLHLHGFNFFVVGQGFGNFDPKKDPLKFNLVDPAERNTVGVPSGGWVAIRFLADNPGV 550
Query: 181 XLMHCHLDVHITWGLAMAFLVEDGVGEMQSL 273
MHCHL+VH TWGL MA++V DG Q L
Sbjct: 551 WFMHCHLEVHTTWGLKMAWVVNDGKRPXQKL 643
Score = 103 bits (220), Expect = 5e-022
Identities = 46/82 (56%), Positives = 51/82 (62%)
Frame = -2 / -2
Query: 251 PSSTRNAMARPQVMCTSRWQCMSXXPGLSATKRMTAQPLTGTPTVFLMGGSSMLKLAVSA 72
PS T A+ RPQV+CTS+WQCM+ PGLSA RM P GTPTVFL GS+ L L S
Sbjct: 621 PSLTTQAIFRPQVVCTSKWQCMNQTPGLSARNRMATHPPDGTPTVFLSAGSTRLNLRGSF 442
Query: 71 XASKLPKPSARM*KS*PWRWMG 6
SKLPKP K PWR G
Sbjct: 441 LGSKLPKP*PTTKKLKPWR*RG 376
>gb|CV226852.1|CV226852 WS0165.B21_H15 PT-DX-A-7 Populus trichocarpa cDNA clone WS0165_H15
3', mRNA sequence
Length = 936
Score = 148 bits (317), Expect = 2e-035
Identities = 57/102 (55%), Positives = 72/102 (70%)
Frame = +1 / -1
Query: 1 NHPIHLHGYDFYILAEGFGNFDAXADTASFNMDDPPMRNTVGVPVNGWAVIRFVADNPGX 180
+HP+HLHG++F+++ +GFGNFD D A+FN+ DP RNTVGVP GWA IRF+ADNPG
Sbjct: 564 SHPLHLHGFNFFVVGQGFGNFDPNKDPANFNLIDPIERNTVGVPSGGWAAIRFLADNPGV 385
Query: 181 XLMHCHLDVHITWGLAMAFLVEDGVGEMQSLEAXXXDXXIC* 306
MHCHL+VH +WGL MA++V DG Q L D C*
Sbjct: 384 WFMHCHLEVHTSWGLKMAWVVLDGKLPNQKLLPPPADLPRC* 259
Score = 100 bits (213), Expect = 5e-021
Identities = 47/96 (48%), Positives = 55/96 (57%)
Frame = -2 / +2
Query: 290 SXXXASSDCISPTPSSTRNAMARPQVMCTSRWQCMSXXPGLSATKRMTAQPLTGTPTVFL 111
S SS + PS T A+ +PQ++CTSRWQCM+ PGLSA R+ A P GTPTVFL
Sbjct: 275 SAGGGSSF*LGSFPSKTTQAIFKPQLVCTSRWQCMNHTPGLSARNRIAAHPPEGTPTVFL 454
Query: 110 MGGSSMLKLAVSAXASKLPKPSARM*KS*PWRWMGW 3
GS LK A S SK PKP K P + GW
Sbjct: 455 SMGSIRLKFAGSLFGSKFPKP*PTTKKLKPCK*RGW 562
>gb|CV237346.1|CV237346 WS01227.B21.1_J01 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01227_J01 3', mRNA sequence
Length = 875
Score = 147 bits (315), Expect = 4e-035
Identities = 55/102 (53%), Positives = 70/102 (68%)
Frame = +1 / -1
Query: 1 NHPIHLHGYDFYILAEGFGNFDAXADTASFNMDDPPMRNTVGVPVNGWAVIRFVADNPGX 180
+HP HLHG++F+++ +GFGNFDA D FN+ DP RNT+ VP GWA IRF ADNPG
Sbjct: 698 SHPFHLHGFNFFVVGKGFGNFDADNDPKKFNLADPVERNTISVPTAGWAAIRFRADNPGV 519
Query: 181 XLMHCHLDVHITWGLAMAFLVEDGVGEMQSLEAXXXDXXIC* 306
+HCHL+VH TWGL M F+V++G G +SL D C*
Sbjct: 518 WFLHCHLEVHTTWGLKMVFVVDNGEGPDESLLPPPSDLPNC* 393
>gb|CV238753.1|CV238753 WS0127.B21.1_O04 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS0127_O04 3', mRNA sequence
Length = 699
Score = 147 bits (315), Expect = 4e-035
Identities = 55/102 (53%), Positives = 70/102 (68%)
Frame = +1 / -2
Query: 1 NHPIHLHGYDFYILAEGFGNFDAXADTASFNMDDPPMRNTVGVPVNGWAVIRFVADNPGX 180
+HP HLHG++F+++ +GFGNFDA D FN+ DP RNT+ VP GWA IRF ADNPG
Sbjct: 698 SHPFHLHGFNFFVVGKGFGNFDADNDPKKFNLADPVERNTISVPTAGWAAIRFRADNPGV 519
Query: 181 XLMHCHLDVHITWGLAMAFLVEDGVGEMQSLEAXXXDXXIC* 306
+HCHL+VH TWGL M F+V++G G +SL D C*
Sbjct: 518 WFLHCHLEVHTTWGLKMVFVVDNGEGPDESLLPPPSDLPNC* 393
>emb|Y13770.1|PTY13770 Populus trichocarpa mRNA for laccase, lac2 gene, partial
Length = 1676
Score = 147 bits (315), Expect = 4e-035
Identities = 55/102 (53%), Positives = 70/102 (68%)
Frame = +1 / +1
Query: 1 NHPIHLHGYDFYILAEGFGNFDAXADTASFNMDDPPMRNTVGVPVNGWAVIRFVADNPGX 180
+HP HLHG++F+++ +GFGNFDA D FN+ DP RNT+ VP GWA IRF ADNPG
Sbjct: 1009 SHPFHLHGFNFFVVGKGFGNFDADNDPKKFNLADPVERNTISVPTAGWAAIRFRADNPGV 1188
Query: 181 XLMHCHLDVHITWGLAMAFLVEDGVGEMQSLEAXXXDXXIC* 306
+HCHL+VH TWGL M F+V++G G +SL D C*
Sbjct: 1189 WFLHCHLEVHTTWGLKMVFVVDNGEGPDESLLPPPSDLPNC* 1314
>gb|CK092561.1|CK092561 G087P57.3pR Populus tension wood cDNA library Populus tremula x
Populus tremuloides cDNA clone G087P57 3', mRNA sequence
Length = 739
Score = 146 bits (313), Expect = 7e-035
Identities = 56/102 (54%), Positives = 68/102 (66%)
Frame = +1 / -3
Query: 1 NHPIHLHGYDFYILAEGFGNFDAXADTASFNMDDPPMRNTVGVPVNGWAVIRFVADNPGX 180
NHPIHLHG++F+ + G GN++ D FN+ DP RNT+GVP GW IRF ADNPG
Sbjct: 626 NHPIHLHGFNFFAVGRGVGNYNPKTDPKKFNLVDPVERNTIGVPSGGWVAIRFRADNPGV 447
Query: 181 XLMHCHLDVHITWGLAMAFLVEDGVGEMQSLEAXXXDXXIC* 306
MHCHL+VH TWGL MAFLV++G G +SL D C*
Sbjct: 446 WFMHCHLEVHTTWGLKMAFLVDNGKGPNESLLPPPTDLPKC* 321
>gb|DN500460.1|DN500460 UL52PE07.5pR Populus cold stressed leaves cDNA library Populus
tremula x Populus tremuloides cDNA clone UL52PE07 5',
mRNA sequence
Length = 649
Score = 145 bits (312), Expect = 1e-034
Identities = 56/103 (54%), Positives = 71/103 (68%)
Frame = +1 / +1
Query: 1 NHPIHLHGYDFYILAEGFGNFDAXADTASFNMDDPPMRNTVGVPVNGWAVIRFVADNPGX 180
+HP+HLHG++ +++ +GFGNFD D A+FN+ DP RNTVGVP GW IRF+ADNPG
Sbjct: 217 SHPLHLHGFNVFVVGQGFGNFDPSKDPANFNLVDPVERNTVGVPSGGWVAIRFLADNPGV 396
Query: 181 XLMHCHLDVHITWGLAMAFLVEDGVGEMQSLEAXXXDXXIC*L 309
MHCHL+VH +WGL MA++V DG Q L D C*L
Sbjct: 397 WFMHCHLEVHTSWGLKMAWVVLDGKLPNQKLLPPPADLPKC*L 525
Score = 101 bits (216), Expect = 2e-021
Identities = 45/87 (51%), Positives = 54/87 (62%)
Frame = -2 / -3
Query: 308 S*QMXXSXXXASSDCISPTPSSTRNAMARPQVMCTSRWQCMSXXPGLSATKRMTAQPLTG 129
S* + S SS + PS T A+ +PQ++CTSRWQCM+ PGLSA R+ QP G
Sbjct: 524 S*HLGRSAGGGSSF*LGSFPSKTTQAIFKPQLVCTSRWQCMNHTPGLSARNRIATQPPEG 345
Query: 128 TPTVFLMGGSSMLKLAVSAXASKLPKP 48
TPTVFL GS+ LK A S SK PKP
Sbjct: 344 TPTVFLSTGSTRLKFAGSLLGSKFPKP 264
>emb|Y13769.1|PTY13769 Populus trichocarpa mRNA for laccase, lac1 gene, partial
Length = 1589
Score = 145 bits (312), Expect = 1e-034
Identities = 55/101 (54%), Positives = 67/101 (66%)
Frame = +1 / +2
Query: 1 NHPIHLHGYDFYILAEGFGNFDAXADTASFNMDDPPMRNTVGVPVNGWAVIRFVADNPGX 180
NHPIHLHG++F+ + G GN++ D FN+ DP RNT+GVP GW IRF ADNPG
Sbjct: 911 NHPIHLHGFNFFAVGRGVGNYNPKTDPKKFNLVDPVERNTIGVPSGGWVAIRFRADNPGV 1090
Query: 181 XLMHCHLDVHITWGLAMAFLVEDGVGEMQSLEAXXXDXXIC 303
MHCHL+VH TWGL MAFLV++G G +SL D C
Sbjct: 1091 WFMHCHLEVHTTWGLKMAFLVDNGKGPNESLLPPPSDLPKC 1213
>gb|CV229532.1|CV229532 WS01913.B21_J16 PT-DX-N-A-10 Populus trichocarpa cDNA clone
WS01913_J16 3', mRNA sequence
Length = 812
Score = 144 bits (310), Expect = 2e-034
Identities = 56/102 (54%), Positives = 68/102 (66%)
Frame = +1 / +3
Query: 1 NHPIHLHGYDFYILAEGFGNFDAXADTASFNMDDPPMRNTVGVPVNGWAVIRFVADNPGX 180
NHPIHLHG++F+ + G GN++ D FN+ DP RNT+GVP GW IRF ADNPG
Sbjct: 399 NHPIHLHGFNFFGVGRGVGNYNPKTDPKKFNLVDPVERNTIGVPSGGWVAIRFRADNPGV 578
Query: 181 XLMHCHLDVHITWGLAMAFLVEDGVGEMQSLEAXXXDXXIC* 306
MHCHL+VH TWGL MAFLV++G G +SL D C*
Sbjct: 579 WFMHCHLEVHTTWGLKMAFLVDNGKGPNESLLPPPSDLPKC* 704
>gb|AI166411.1|AI166411 xylem.est.246 Poplar xylem Lambda ZAPII library Populus trichocarpa
cDNA 5', mRNA sequence
Length = 443
Score = 143 bits (306), Expect = 7e-034
Identities = 55/102 (53%), Positives = 67/102 (65%)
Frame = +1 / +2
Query: 1 NHPIHLHGYDFYILAEGFGNFDAXADTASFNMDDPPMRNTVGVPVNGWAVIRFVADNPGX 180
NHPIH HG++F+ + G GN++ D FN+ DP RNT+GVP GW IRF ADNPG
Sbjct: 95 NHPIHXHGFNFFAVGRGVGNYNPKTDPKKFNLVDPVERNTIGVPSGGWVAIRFRADNPGV 274
Query: 181 XLMHCHLDVHITWGLAMAFLVEDGVGEMQSLEAXXXDXXIC* 306
MHCHL+VH TWGL MAFLV++G G +SL D C*
Sbjct: 275 *FMHCHLEVHTTWGLKMAFLVDNGKGPNESLLPPPSDLPKC* 400
>gb|CF235421.1|CF235421 PtaJXT0022F2F0212 Poplar cDNA library from young tension xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 552
Score = 143 bits (306), Expect = 7e-034
Identities = 53/102 (51%), Positives = 68/102 (66%)
Frame = +1 / +2
Query: 1 NHPIHLHGYDFYILAEGFGNFDAXADTASFNMDDPPMRNTVGVPVNGWAVIRFVADNPGX 180
+HP HLHG++F+++ +G GNFD D FN+ DP RNTV VP GW IRF ADNPG
Sbjct: 140 SHPFHLHGFNFFVVGKGLGNFDPDNDPKKFNLADPVERNTVSVPTAGWIAIRFKADNPGV 319
Query: 181 XLMHCHLDVHITWGLAMAFLVEDGVGEMQSLEAXXXDXXIC* 306
+HCHL+VH TWGL MAF+V++G G +S+ D C*
Sbjct: 320 WFLHCHLEVHTTWGLKMAFVVDNGKGPNESILPPPSDLPTC* 445
Database: Populus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:49 PM
Number of letters in database: 203,408,664
Number of sequences in database: 369,679
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 122,249,597
Number of Sequences: 369679
Number of extensions: 1285611
Number of successful extensions: 57378
Number of sequences better than 1.0e-020: 140
length of database: 67,802,888
effective HSP length: 50
effective length of database: 49,318,938
effective search space used: 4142790792
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)