TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QAN24c09.yg.2.1
(425 letters)
Database: Populus_nucl_with_EST.fasta
369,679 sequences; 203,408,664 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CA926496.1|CA926496 MTU6CR.P15.F11 Aspen root cDNA Libra... 182 9e-052
gb|CA926817.1|CA926817 MTU6CR.P1.E04 Aspen root cDNA Librar... 182 9e-052
gb|AY196961.1| Populus tremuloides cellulose synthase 6 (Ce... 191 2e-048
gb|CF229740.1|CF229740 PtaXM0029A6A0602 Poplar cDNA library... 153 2e-040
gb|DT509821.1|DT509821 WS02424.BR_N10 PTxD-ICC-N-A-14 Popul... 163 5e-040
gb|CF229283.1|CF229283 PtaXM0023E4E0410 Poplar cDNA library... 163 6e-040
gb|AJ777820.1|AJ777820 AJ777820 Populus euphratica root 3-6... 163 6e-040
gb|AY055724.2| Populus tremuloides cellulose synthase (CesA... 163 6e-040
gb|AY573575.1| Populus tremula x Populus tremuloides cellul... 161 2e-039
gb|AY162180.1| Populus tremuloides cellulose synthase (CesA... 161 2e-039
gb|AI162413.1|AI162413 A017P22U Hybrid aspen plasmid librar... 160 3e-039
gb|BI131900.1|BI131900 G127P28Y Populus cambium cDNA librar... 160 3e-039
gb|CN524029.1|CN524029 GQ015M07.T3_H06 GQ015 Populus tricho... 160 3e-039
gb|CN524680.1|CN524680 GQ015M13.T3_D10 GQ015 Populus tricho... 160 3e-039
gb|CV225888.1|CV225888 WS0162.B21_K19 PT-DX-A-7 Populus tri... 160 3e-039
gb|CV268970.1|CV268970 WS0206.B21_P09 PTxN-IB-N-A-11 Populu... 160 3e-039
gb|AY573571.1| Populus tremula x Populus tremuloides cellul... 160 3e-039
gb|DV466097.1|DV466097 MTUNUL1.P47.C03 NUL Populus fremonti... 149 4e-039
gb|BU896705.1|BU896705 X044E08 Populus wood cDNA library Po... 160 4e-039
gb|CF234438.1|CF234438 Ptajxojxo2F10F1012 Poplar cDNA libra... 158 2e-038
gb|CV227633.1|CV227633 WS0167.B21_M03 PT-DX-A-7 Populus tri... 158 2e-038
gb|DT475055.1|DT475055 WS0125.BR_N16 PT-GT-FL-A-3 Populus t... 158 2e-038
gb|DT475135.1|DT475135 WS0126.BR_C03 PT-GT-FL-A-3 Populus t... 158 2e-038
gb|BI128528.1|BI128528 G077P53Y Populus cambium cDNA librar... 157 3e-038
gb|CF233341.1|CF233341 PtaJXO0022B5B0503 Poplar cDNA librar... 157 3e-038
gb|AY573572.1| Populus tremula x Populus tremuloides cellul... 157 4e-038
gb|CF236377.1|CF236377 PtaJXT2B10B1004 Poplar cDNA library ... 156 5e-038
gb|CV226017.1|CV226017 WS0163.B21_A20 PT-DX-A-7 Populus tri... 155 1e-037
gb|CB239511.1|CB239511 RSH12F10 two-month-old roots from cl... 155 2e-037
gb|AY162181.1| Populus tremuloides cellulose synthase (CesA... 155 2e-037
gb|CK320732.1|CK320732 X9SP01b11 Populus stem seasonal libr... 154 4e-037
gb|CA925680.1|CA925680 MTU7TL.P4.E11 Aspen leaf cDNA Librar... 153 7e-037
gb|CN550567.1|CN550567 GQ0241.B3_I15 GQ024 Populus trichoca... 153 7e-037
gb|AI162850.1|AI162850 A025P50U Hybrid aspen plasmid librar... 152 1e-036
gb|BU830997.1|BU830997 T015G10 Populus apical shoot cDNA li... 151 2e-036
gb|CF232388.1|CF232388 PtaJXO0009H2H0216 Poplar cDNA librar... 151 2e-036
gb|DT487943.1|DT487943 WS02535.B21_B11 PT-MB-N-A-15 Populus... 151 2e-036
gb|AY095297.1| Populus tremuloides cellulose synthase (CesA... 150 3e-036
gb|AJ778476.1|AJ778476 AJ778476 Populus euphratica cambium ... 150 5e-036
gb|AJ774508.1|AJ774508 AJ774508 Populus euphratica shoot 3-... 148 2e-035
gb|AY573573.2| Populus tremula x Populus tremuloides cellul... 146 8e-035
gb|CF235000.1|CF235000 PtaJXT0017F7F0711 Poplar cDNA librar... 144 3e-034
gb|BI128887.1|BI128887 G083P04Y Populus cambium cDNA librar... 144 4e-034
gb|CK092990.1|CK092990 G103P13.3pR Populus tension wood cDN... 144 4e-034
gb|DN493622.1|DN493622 G071P10.5pR Populus tension wood cDN... 144 4e-034
gb|AF072131.1|AF072131 Populus tremuloides secondary xylem ... 144 4e-034
gb|AY573574.1| Populus tremula x Populus tremuloides cellul... 144 4e-034
gb|DQ004570.1| Populus tomentosa cellulose synthase (cesa1)... 144 4e-034
gb|CF229187.1|CF229187 PtaXM0022D10D1008 Poplar cDNA librar... 143 7e-034
gb|CF232642.1|CF232642 PtaJXO0013H5H0515 Poplar cDNA librar... 142 1e-033
gb|CV226195.1|CV226195 WS0163.B21_J02 PT-DX-A-7 Populus tri... 133 3e-033
gb|CF232848.1|CF232848 PtaJXO0016E6E0610 Poplar cDNA librar... 141 3e-033
gb|CK087778.1|CK087778 A020P56.3pR Hybrid aspen plasmid lib... 138 1e-032
gb|CF228734.1|CF228734 PtaXM0016G4G0414 Poplar cDNA library... 138 2e-032
gb|AF527387.1| Populus tremuloides xylem-specific cellulose... 138 2e-032
gb|CK100621.1|CK100621 C057P32.5pR Populus strain T89 leave... 133 6e-031
gb|BI127743.1|BI127743 G065P23Y Populus cambium cDNA librar... 131 2e-030
gb|BI128874.1|BI128874 G082P82Y Populus cambium cDNA librar... 131 2e-030
gb|CN549469.1|CN549469 GQ0241.B3_B20 GQ024 Populus trichoca... 129 7e-030
gb|CV225435.1|CV225435 WS0161.B21_G07 PT-DX-A-7 Populus tri... 129 7e-030
gb|CF232837.1|CF232837 PtaJXO0016D5D0507 Poplar cDNA librar... 129 1e-029
gb|CA927446.1|CA927446 MTU6CR.P9.B04 Aspen root cDNA Librar... 128 2e-029
gb|AJ778868.1|AJ778868 AJ778868 Populus euphratica cambium ... 124 3e-028
gb|CN520055.1|CN520055 GQ0105.B3_H23 GQ010 Populus trichoca... 123 5e-028
gb|DV466748.1|DV466748 MTUNUL1.P9.G02 NUL Populus fremontii... 123 5e-028
gb|AF081534.1|AF081534 Populus x canescens cellulose syntha... 123 5e-028
gb|DT476519.1|DT476519 WS01229.B21_N17 PT-GT-FL-A-3 Populus... 122 1e-027
gb|DT500468.1|DT500468 PX0015.BR_I21 PT-X-FL-A-1 Populus tr... 119 1e-026
gb|CF235304.1|CF235304 PtaJXT0021C1C0105 Poplar cDNA librar... 117 3e-026
gb|CF234212.1|CF234212 PtaJXO3H12H1216 Poplar cDNA library ... 71 1e-025
gb|CK117433.1|CK117433 B050P94 Hybrid aspen plasmid library... 115 1e-025
gb|CK102126.1|CK102126 G065P23.5pR Populus tension wood cDN... 108 3e-023
gb|BI070846.1|BI070846 C045P75U Populus strain T89 leaves P... 79 1e-022
gb|AY162184.1| Populus tremuloides cellulose synthase-like ... 105 2e-022
gb|BU866508.1|BU866508 S067E12 Populus imbibed seed cDNA li... 103 5e-022
gb|DT493063.1|DT493063 WS02553.C21_E11 PT-MB-N-A-15 Populus... 103 7e-022
>gb|CA926496.1|CA926496 MTU6CR.P15.F11 Aspen root cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 294
Score = 182 bits (392), Expect(2) = 9e-052
Identities = 71/83 (85%), Positives = 78/83 (93%)
Frame = +1 / +2
Query: 151 QLNNVASLWFMSLFICIFATSILXMRWSGVGIDDWWRNEQFWVIGGVSSHLFAVFQGLLX 330
+L+N ASLWF+SLFICIFATSIL MRWSGVGID+WWRNEQFWVIGGVS+HLFAVFQGLL
Sbjct: 44 ELSNAASLWFLSLFICIFATSILEMRWSGVGIDEWWRNEQFWVIGGVSAHLFAVFQGLLK 223
Query: 331 VIAGVDTSXTXTSKGGDDDEFSE 399
V+AGVDT+ T TSKGGDDDEFSE
Sbjct: 224 VLAGVDTNFTVTSKGGDDDEFSE 292
Score = 126 bits (269), Expect(2) = 6e-032
Identities = 52/72 (72%), Positives = 57/72 (79%)
Frame = -1 / -1
Query: 368 DVXVXLVSTPAMTXRSP*NTAKRCEDTPPMTQNCSFLHQSSIPTPLHLIXRMLVAKMQIK 189
DV V VSTPA T +SP NTA RC DTPP+TQNCSFLH SSIPTPLHLI +LVAK+Q+K
Sbjct: 261 DVTVKFVSTPARTFKSPWNTANRCADTPPITQNCSFLHHSSIPTPLHLISSILVAKIQMK 82
Query: 188 SDMNHRLATLFS 153
D NHRLA L S
Sbjct: 81 RDKNHRLAALLS 46
Score = 39.1 bits (79), Expect(2) = 9e-052
Identities = 14/16 (87%), Positives = 16/16 (100%)
Frame = +1 / +2
Query: 4 LPAICLLTGKFITPEV 51
LPA+CLLTGKFITPE+
Sbjct: 2 LPAVCLLTGKFITPEL 49
Score = 29.0 bits (57), Expect(2) = 6e-032
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = -1 / -1
Query: 50 TSGVINFPVNKQMAG 6
+SGVINFPV+K AG
Sbjct: 48 SSGVINFPVSKHTAG 4
>gb|CA926817.1|CA926817 MTU6CR.P1.E04 Aspen root cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 294
Score = 182 bits (392), Expect(2) = 9e-052
Identities = 71/83 (85%), Positives = 78/83 (93%)
Frame = +1 / -2
Query: 151 QLNNVASLWFMSLFICIFATSILXMRWSGVGIDDWWRNEQFWVIGGVSSHLFAVFQGLLX 330
+L+N ASLWF+SLFICIFATSIL MRWSGVGID+WWRNEQFWVIGGVS+HLFAVFQGLL
Sbjct: 251 ELSNAASLWFLSLFICIFATSILEMRWSGVGIDEWWRNEQFWVIGGVSAHLFAVFQGLLK 72
Query: 331 VIAGVDTSXTXTSKGGDDDEFSE 399
V+AGVDT+ T TSKGGDDDEFSE
Sbjct: 71 VLAGVDTNFTVTSKGGDDDEFSE 3
Score = 126 bits (269), Expect(2) = 6e-032
Identities = 52/72 (72%), Positives = 57/72 (79%)
Frame = -1 / +1
Query: 368 DVXVXLVSTPAMTXRSP*NTAKRCEDTPPMTQNCSFLHQSSIPTPLHLIXRMLVAKMQIK 189
DV V VSTPA T +SP NTA RC DTPP+TQNCSFLH SSIPTPLHLI +LVAK+Q+K
Sbjct: 34 DVTVKFVSTPARTFKSPWNTANRCADTPPITQNCSFLHHSSIPTPLHLISSILVAKIQMK 213
Query: 188 SDMNHRLATLFS 153
D NHRLA L S
Sbjct: 214 RDKNHRLAALLS 249
Score = 39.1 bits (79), Expect(2) = 9e-052
Identities = 14/16 (87%), Positives = 16/16 (100%)
Frame = +1 / -2
Query: 4 LPAICLLTGKFITPEV 51
LPA+CLLTGKFITPE+
Sbjct: 293 LPAVCLLTGKFITPEL 246
Score = 29.0 bits (57), Expect(2) = 6e-032
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = -1 / +1
Query: 50 TSGVINFPVNKQMAG 6
+SGVINFPV+K AG
Sbjct: 247 SSGVINFPVSKHTAG 291
>gb|AY196961.1| Populus tremuloides cellulose synthase 6 (CesA6) mRNA, complete cds
Length = 3773
Score = 191 bits (411), Expect = 2e-048
Identities = 78/102 (76%), Positives = 86/102 (84%)
Frame = +1 / +2
Query: 100 FCLLWNV*TLCSLFHLLQLNNVASLWFMSLFICIFATSILXMRWSGVGIDDWWRNEQFWV 279
+C L V L F +L+N ASLWF+SLFICIFATSIL MRWSGVGID+WWRNEQFWV
Sbjct: 2690 YCTLPAVCLLTGKFITPELSNAASLWFLSLFICIFATSILEMRWSGVGIDEWWRNEQFWV 2869
Query: 280 IGGVSSHLFAVFQGLLXVIAGVDTSXTXTSKGGDDDEFSELY 405
IGGVS+HLFAVFQGLL V+AGVDT+ T TSKGGDDDEFSELY
Sbjct: 2870 IGGVSAHLFAVFQGLLKVLAGVDTNFTVTSKGGDDDEFSELY 2995
Score = 126 bits (270), Expect(2) = 3e-031
Identities = 54/84 (64%), Positives = 59/84 (70%)
Frame = -1 / -3
Query: 404 YXXXXXXXXXPFDVXVXLVSTPAMTXRSP*NTAKRCEDTPPMTQNCSFLHQSSIPTPLHL 225
Y P DV V VSTPA T +SP NTA RC DTPP+TQNCSFLH SSIPTPLHL
Sbjct: 2994 YSSENSSSSPPLDVTVKFVSTPARTFKSPWNTANRCADTPPITQNCSFLHHSSIPTPLHL 2815
Query: 224 IXRMLVAKMQIKSDMNHRLATLFS 153
I +LVAK+Q+K D NHRLA L S
Sbjct: 2814 ISSILVAKIQMKRDKNHRLAALLS 2743
Score = 91.3 bits (193), Expect(2) = 7e-025
Identities = 42/89 (47%), Positives = 56/89 (62%)
Frame = +3 / +1
Query: 138 VSSAAAEQCCQPVVHVTFYLHFCYKHPXNEMEWCWD**LVEE*AVLGHWRCVLAPLRCVS 317
V + A+QCCQPVV V+F+L+F K+ NEMEW W * +VE+ +LG R + + V
Sbjct: 2728 VHHSGAQQCCQPVVFVSFHLYFRNKYTGNEMEWGWY*RVVEKRTILGDRRGISTSICSVP 2907
Query: 318 GTSXGHSWC*YKLHXDIKGWR**RILRAV 404
G G SWC*Y+LH + R R+LRAV
Sbjct: 2908 GAFKGSSWC*YELHCYV*RRRRRRVLRAV 2994
Score = 41.4 bits (84), Expect(2) = 7e-025
Identities = 15/17 (88%), Positives = 17/17 (100%)
Frame = +1 / +2
Query: 1 TLPAICLLTGKFITPEV 51
TLPA+CLLTGKFITPE+
Sbjct: 2696 TLPAVCLLTGKFITPEL 2746
Score = 27.6 bits (54), Expect(2) = 3e-031
Identities = 10/15 (66%), Positives = 13/15 (86%)
Frame = -1 / -3
Query: 50 TSGVINFPVNKQMAG 6
+SGV+NFPV+K AG
Sbjct: 2745 SSGVMNFPVSKHTAG 2701
>gb|CF229740.1|CF229740 PtaXM0029A6A0602 Poplar cDNA library from mature xylem Populus alba
x Populus tremula cDNA 5', mRNA sequence
Length = 759
Score = 153 bits (328), Expect(2) = 2e-040
Identities = 61/90 (67%), Positives = 71/90 (78%)
Frame = +1 / +3
Query: 139 FHLLQLNNVASLWFMSLFICIFATSILXMRWSGVGIDDWWRNEQFWVIGGVSSHLFAVFQ 318
F + LNN+AS+WF++ FI I ATS+L +RWSGV I D WRNEQFWV GGVS+HLFAVFQ
Sbjct: 153 FIIPTLNNLASIWFLAXFISIIATSVLELRWSGVSIQDLWRNEQFWVXGGVSAHLFAVFQ 332
Query: 319 GLLXVIAGVDTSXTXTSKGGDDDEFSELYL 408
GLL V+ GVDT+ T TSK DD EF ELYL
Sbjct: 333 GLLKVLGGVDTNFTVTSKSADDAEFGELYL 422
Score = 31.8 bits (63), Expect(2) = 2e-040
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +1 / +3
Query: 1 TLPAICLLTGKFITP 45
T+PA+CL TGKFI P
Sbjct: 120 TIPAVCLPTGKFIIP 164
>gb|DT509821.1|DT509821 WS02424.BR_N10 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02424_N10 5', mRNA sequence
Length = 723
Score = 163 bits (351), Expect = 5e-040
Identities = 64/96 (66%), Positives = 78/96 (81%)
Frame = +1 / +1
Query: 100 FCLLWNV*TLCSLFHLLQLNNVASLWFMSLFICIFATSILXMRWSGVGIDDWWRNEQFWV 279
+C L V L F + Q++N+AS+WF+SLF+ IFAT IL MRWSGVGID+WWRNEQFWV
Sbjct: 292 YCTLPAVCLLTGKFIIPQISNIASIWFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWV 471
Query: 280 IGGVSSHLFAVFQGLLXVIAGVDTSXTXTSKGGDDD 387
IGGVS+HLFAVFQGLL V+AG+DT+ T TSK D+D
Sbjct: 472 IGGVSAHLFAVFQGLLKVLAGIDTNFTVTSKASDED 579
Score = 106 bits (226), Expect = 8e-023
Identities = 50/90 (55%), Positives = 57/90 (63%)
Frame = -1 / -2
Query: 371 FDVXVXLVSTPAMTXRSP*NTAKRCEDTPPMTQNCSFLHQSSIPTPLHLIXRMLVAKMQI 192
F+V V VS PA T P TAKR DTPP+TQNCSFLH SSIPTPLHLI ++ VAK++
Sbjct: 563 FEVTVKFVSIPARTFSRPWKTAKR*ADTPPITQNCSFLHHSSIPTPLHLISKIPVAKIER 384
Query: 191 KSDMNHRLATLFSCSR*NSEHKVQTFHNKQ 102
K DMN LA L C N + T N Q
Sbjct: 383 KRDMNQILAMLLICGIMNFPVRRHTAGNVQ 294
>gb|CF229283.1|CF229283 PtaXM0023E4E0410 Poplar cDNA library from mature xylem Populus alba
x Populus tremula cDNA 5', mRNA sequence
Length = 642
Score = 163 bits (350), Expect = 6e-040
Identities = 63/96 (65%), Positives = 78/96 (81%)
Frame = +1 / +2
Query: 100 FCLLWNV*TLCSLFHLLQLNNVASLWFMSLFICIFATSILXMRWSGVGIDDWWRNEQFWV 279
+C L + L F + Q++N+AS+WF+SLF+ IFAT IL MRWSGVGID+WWRNEQFWV
Sbjct: 185 YCTLPAICLLTDKFIIPQISNIASIWFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWV 364
Query: 280 IGGVSSHLFAVFQGLLXVIAGVDTSXTXTSKGGDDD 387
IGGVS+HLFAVFQGLL V+AG+DT+ T TSK D+D
Sbjct: 365 IGGVSAHLFAVFQGLLKVLAGIDTNFTVTSKASDED 472
Score = 110 bits (235), Expect = 5e-024
Identities = 47/73 (64%), Positives = 53/73 (72%)
Frame = -1 / -1
Query: 368 DVXVXLVSTPAMTXRSP*NTAKRCEDTPPMTQNCSFLHQSSIPTPLHLIXRMLVAKMQIK 189
DV V LVS PA T P TAKR +TPPMTQNCSFLH SSIPTPLHLI ++ VAKM+ K
Sbjct: 453 DVTVKLVSMPASTLSKPWKTAKRWAETPPMTQNCSFLHHSSIPTPLHLISKIPVAKMERK 274
Query: 188 SDMNHRLATLFSC 150
++NH LA L C
Sbjct: 273 REINHMLAMLLIC 235
>gb|AJ777820.1|AJ777820 AJ777820 Populus euphratica root 3-6 months Populus euphratica cDNA
clone P0000400035F01F1, mRNA sequence
Length = 658
Score = 163 bits (350), Expect = 6e-040
Identities = 63/96 (65%), Positives = 78/96 (81%)
Frame = +1 / +2
Query: 100 FCLLWNV*TLCSLFHLLQLNNVASLWFMSLFICIFATSILXMRWSGVGIDDWWRNEQFWV 279
+C L + L F + Q++N+AS+WF+SLF+ IFAT IL MRWSGVGID+WWRNEQFWV
Sbjct: 176 YCTLPAICLLTDKFIIPQISNIASIWFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWV 355
Query: 280 IGGVSSHLFAVFQGLLXVIAGVDTSXTXTSKGGDDD 387
IGGVS+HLFAVFQGLL V+AG+DT+ T TSK D+D
Sbjct: 356 IGGVSAHLFAVFQGLLKVLAGIDTNFTVTSKASDED 463
Score = 110 bits (235), Expect = 5e-024
Identities = 47/73 (64%), Positives = 53/73 (72%)
Frame = -1 / -2
Query: 368 DVXVXLVSTPAMTXRSP*NTAKRCEDTPPMTQNCSFLHQSSIPTPLHLIXRMLVAKMQIK 189
DV V LVS PA T P TAKR +TPP+TQNCSFLH SSIPTPLHLI +M VAKM+ K
Sbjct: 444 DVTVKLVSMPASTLSKPWKTAKRWAETPPITQNCSFLHHSSIPTPLHLISKMPVAKMERK 265
Query: 188 SDMNHRLATLFSC 150
++NH LA L C
Sbjct: 264 REINHMLAMLLIC 226
>gb|AY055724.2| Populus tremuloides cellulose synthase (CesA5) mRNA, complete cds
Length = 3532
Score = 163 bits (350), Expect = 6e-040
Identities = 63/96 (65%), Positives = 78/96 (81%)
Frame = +1 / +2
Query: 100 FCLLWNV*TLCSLFHLLQLNNVASLWFMSLFICIFATSILXMRWSGVGIDDWWRNEQFWV 279
+C L + L F + Q++N+AS+WF+SLF+ IFAT IL MRWSGVGID+WWRNEQFWV
Sbjct: 2834 YCTLPAICLLTDKFIIPQISNIASIWFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWV 3013
Query: 280 IGGVSSHLFAVFQGLLXVIAGVDTSXTXTSKGGDDD 387
IGGVS+HLFAVFQGLL V+AG+DT+ T TSK D+D
Sbjct: 3014 IGGVSAHLFAVFQGLLKVLAGIDTNFTVTSKASDED 3121
Score = 107 bits (228), Expect = 4e-023
Identities = 46/70 (65%), Positives = 52/70 (74%)
Frame = -1 / -2
Query: 368 DVXVXLVSTPAMTXRSP*NTAKRCEDTPPMTQNCSFLHQSSIPTPLHLIXRMLVAKMQIK 189
DV V LVS PA T P TAKR +TPPMTQNCSFLH SSIPTPLHLI ++ VAKM+ K
Sbjct: 3102 DVTVKLVSMPASTLSKPWKTAKRWAETPPMTQNCSFLHHSSIPTPLHLISKIPVAKMERK 2923
Query: 188 SDMNHRLATL 159
++NH LA L
Sbjct: 2922 REINHMLAML 2893
>gb|AY573575.1| Populus tremula x Populus tremuloides cellulose synthase (CesA4)
mRNA, complete cds
Length = 3778
Score = 161 bits (346), Expect = 2e-039
Identities = 66/103 (64%), Positives = 80/103 (77%)
Frame = +1 / +1
Query: 100 FCLLWNV*TLCSLFHLLQLNNVASLWFMSLFICIFATSILXMRWSGVGIDDWWRNEQFWV 279
+C L + L F + +++N AS+ F++LFI I AT IL M+W GVGIDDWWRNEQFWV
Sbjct: 2854 YCTLPAICLLTGKFIVPEISNYASIVFIALFISIAATGILEMQWGGVGIDDWWRNEQFWV 3033
Query: 280 IGGVSSHLFAVFQGLLXVIAGVDTSXTXTSKGGDDDEFSELYL 408
IGGVSSHLFA+FQGLL V+AGV T+ T TSKG DD EFSELY+
Sbjct: 3034 IGGVSSHLFALFQGLLKVLAGVSTNFTVTSKGADDGEFSELYI 3162
Score = 88.6 bits (187), Expect(2) = 9e-024
Identities = 38/80 (47%), Positives = 51/80 (63%)
Frame = +3 / +3
Query: 165 CQPVVHVTFYLHFCYKHPXNEMEWCWD**LVEE*AVLGHWRCVLAPLRCVSGTSXGHSWC 344
CQ VH +++ C +P + + WC D *LVE+* +LG WRC + P+ + G + G WC
Sbjct: 2919 CQYRVHSPLHIYSCNWYPRDAVGWCRDR*LVEK*TILGDWRCFITPVCSLPGFAQGFGWC 3098
Query: 345 *YKLHXDIKGWR**RILRAV 404
*YKLH IK R* RILRA+
Sbjct: 3099 *YKLHCYIKRSR*WRILRAL 3158
Score = 40.5 bits (82), Expect(2) = 9e-024
Identities = 15/17 (88%), Positives = 16/17 (94%)
Frame = +1 / +1
Query: 1 TLPAICLLTGKFITPEV 51
TLPAICLLTGKFI PE+
Sbjct: 2860 TLPAICLLTGKFIVPEI 2910
>gb|AY162180.1| Populus tremuloides cellulose synthase (CesA7) mRNA, complete cds
Length = 3809
Score = 161 bits (346), Expect = 2e-039
Identities = 66/103 (64%), Positives = 80/103 (77%)
Frame = +1 / +3
Query: 100 FCLLWNV*TLCSLFHLLQLNNVASLWFMSLFICIFATSILXMRWSGVGIDDWWRNEQFWV 279
+C L + L F + +++N AS+ F++LFI I AT IL M+W GVGIDDWWRNEQFWV
Sbjct: 2820 YCTLPAICLLTGKFIVPEISNYASIVFIALFISIAATGILEMQWGGVGIDDWWRNEQFWV 2999
Query: 280 IGGVSSHLFAVFQGLLXVIAGVDTSXTXTSKGGDDDEFSELYL 408
IGGVSSHLFA+FQGLL V+AGV T+ T TSKG DD EFSELY+
Sbjct: 3000 IGGVSSHLFALFQGLLKVLAGVSTNFTVTSKGADDGEFSELYI 3128
Score = 86.3 bits (182), Expect(2) = 4e-023
Identities = 37/80 (46%), Positives = 51/80 (63%)
Frame = +3 / +2
Query: 165 CQPVVHVTFYLHFCYKHPXNEMEWCWD**LVEE*AVLGHWRCVLAPLRCVSGTSXGHSWC 344
CQ VH +++ C +P + + WC + *LVE+* +LG WRC + P+ + G + G WC
Sbjct: 2885 CQYRVHSPLHIYSCNWYPRDAVGWCRNR*LVEK*TILGDWRCFITPVCSLPGFAQGFGWC 3064
Query: 345 *YKLHXDIKGWR**RILRAV 404
*YKLH IK R* RILRA+
Sbjct: 3065 *YKLHCYIKRSR*WRILRAL 3124
Score = 40.5 bits (82), Expect(2) = 4e-023
Identities = 15/17 (88%), Positives = 16/17 (94%)
Frame = +1 / +3
Query: 1 TLPAICLLTGKFITPEV 51
TLPAICLLTGKFI PE+
Sbjct: 2826 TLPAICLLTGKFIVPEI 2876
>gb|AI162413.1|AI162413 A017P22U Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA 5', mRNA sequence
Length = 567
Score = 160 bits (345), Expect = 3e-039
Identities = 66/103 (64%), Positives = 78/103 (75%)
Frame = +1 / +1
Query: 100 FCLLWNV*TLCSLFHLLQLNNVASLWFMSLFICIFATSILXMRWSGVGIDDWWRNEQFWV 279
+C + V L F + LNN+AS+WF++LFI I ATS+L +RWSGV I D WRNEQFWV
Sbjct: 163 YCTIPAVCLLTGKFIIPTLNNLASIWFLALFISIIATSVLELRWSGVSIQDLWRNEQFWV 342
Query: 280 IGGVSSHLFAVFQGLLXVIAGVDTSXTXTSKGGDDDEFSELYL 408
IGGVS+HLFAVFQGLL V+ GVDT+ T TSK DD EF ELYL
Sbjct: 343 IGGVSAHLFAVFQGLLKVLGGVDTNFTVTSKSADDAEFGELYL 471
>gb|BI131900.1|BI131900 G127P28Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 476
Score = 160 bits (345), Expect = 3e-039
Identities = 66/103 (64%), Positives = 78/103 (75%)
Frame = +1 / +1
Query: 100 FCLLWNV*TLCSLFHLLQLNNVASLWFMSLFICIFATSILXMRWSGVGIDDWWRNEQFWV 279
+C + V L F + LNN+AS+WF++LFI I ATS+L +RWSGV I D WRNEQFWV
Sbjct: 160 YCTIPAVCLLTGKFIIPTLNNLASIWFLALFISIIATSVLELRWSGVSIQDLWRNEQFWV 339
Query: 280 IGGVSSHLFAVFQGLLXVIAGVDTSXTXTSKGGDDDEFSELYL 408
IGGVS+HLFAVFQGLL V+ GVDT+ T TSK DD EF ELYL
Sbjct: 340 IGGVSAHLFAVFQGLLKVLGGVDTNFTVTSKSADDAEFGELYL 468
>gb|CN524029.1|CN524029 GQ015M07.T3_H06 GQ015 Populus trichocarpa x Populus deltoides cDNA
clone GQ015M07_H06 5', mRNA sequence
Length = 758
Score = 160 bits (345), Expect = 3e-039
Identities = 66/103 (64%), Positives = 78/103 (75%)
Frame = +1 / +1
Query: 100 FCLLWNV*TLCSLFHLLQLNNVASLWFMSLFICIFATSILXMRWSGVGIDDWWRNEQFWV 279
+C + V L F + LNN+AS+WF++LFI I ATS+L +RWSGV I D WRNEQFWV
Sbjct: 16 YCTIPAVCLLTGKFIIPTLNNLASIWFLALFISIIATSVLELRWSGVSIQDLWRNEQFWV 195
Query: 280 IGGVSSHLFAVFQGLLXVIAGVDTSXTXTSKGGDDDEFSELYL 408
IGGVS+HLFAVFQGLL V+ GVDT+ T TSK DD EF ELYL
Sbjct: 196 IGGVSAHLFAVFQGLLKVLGGVDTNFTVTSKSADDAEFGELYL 324
>gb|CN524680.1|CN524680 GQ015M13.T3_D10 GQ015 Populus trichocarpa x Populus deltoides cDNA
clone GQ015M13_D10 5', mRNA sequence
Length = 796
Score = 160 bits (345), Expect = 3e-039
Identities = 66/103 (64%), Positives = 78/103 (75%)
Frame = +1 / +3
Query: 100 FCLLWNV*TLCSLFHLLQLNNVASLWFMSLFICIFATSILXMRWSGVGIDDWWRNEQFWV 279
+C + V L F + LNN+AS+WF++LFI I ATS+L +RWSGV I D WRNEQFWV
Sbjct: 156 YCTIPAVCLLTGKFIIPTLNNLASIWFLALFISIIATSVLELRWSGVSIQDLWRNEQFWV 335
Query: 280 IGGVSSHLFAVFQGLLXVIAGVDTSXTXTSKGGDDDEFSELYL 408
IGGVS+HLFAVFQGLL V+ GVDT+ T TSK DD EF ELYL
Sbjct: 336 IGGVSAHLFAVFQGLLKVLGGVDTNFTVTSKSADDAEFGELYL 464
>gb|CV225888.1|CV225888 WS0162.B21_K19 PT-DX-A-7 Populus trichocarpa cDNA clone WS0162_K19
3', mRNA sequence
Length = 883
Score = 160 bits (345), Expect = 3e-039
Identities = 66/103 (64%), Positives = 78/103 (75%)
Frame = +1 / -2
Query: 100 FCLLWNV*TLCSLFHLLQLNNVASLWFMSLFICIFATSILXMRWSGVGIDDWWRNEQFWV 279
+C + V L F + LNN+AS+WF++LFI I ATS+L +RWSGV I D WRNEQFWV
Sbjct: 861 YCTIPAVCLLTGKFIIPTLNNLASIWFLALFISIIATSVLELRWSGVSIQDLWRNEQFWV 682
Query: 280 IGGVSSHLFAVFQGLLXVIAGVDTSXTXTSKGGDDDEFSELYL 408
IGGVS+HLFAVFQGLL V+ GVDT+ T TSK DD EF ELYL
Sbjct: 681 IGGVSAHLFAVFQGLLKVLGGVDTNFTVTSKSADDAEFGELYL 553
>gb|CV268970.1|CV268970 WS0206.B21_P09 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS0206_P09 3', mRNA sequence
Length = 756
Score = 160 bits (345), Expect = 3e-039
Identities = 66/103 (64%), Positives = 78/103 (75%)
Frame = +1 / +1
Query: 100 FCLLWNV*TLCSLFHLLQLNNVASLWFMSLFICIFATSILXMRWSGVGIDDWWRNEQFWV 279
+C + V L F + LNN+AS+WF++LFI I ATS+L +RWSGV I D WRNEQFWV
Sbjct: 208 YCTIPAVCLLTGKFIIPTLNNLASIWFLALFISIIATSVLELRWSGVSIQDLWRNEQFWV 387
Query: 280 IGGVSSHLFAVFQGLLXVIAGVDTSXTXTSKGGDDDEFSELYL 408
IGGVS+HLFAVFQGLL V+ GVDT+ T TSK DD EF ELYL
Sbjct: 388 IGGVSAHLFAVFQGLLKVLGGVDTNFTVTSKSADDAEFGELYL 516
>gb|AY573571.1| Populus tremula x Populus tremuloides cellulose synthase (CesA1)
mRNA, complete cds
Length = 3472
Score = 160 bits (345), Expect = 3e-039
Identities = 66/103 (64%), Positives = 78/103 (75%)
Frame = +1 / +3
Query: 100 FCLLWNV*TLCSLFHLLQLNNVASLWFMSLFICIFATSILXMRWSGVGIDDWWRNEQFWV 279
+C + V L F + LNN+AS+WF++LFI I ATS+L +RWSGV I D WRNEQFWV
Sbjct: 2604 YCTIPAVCLLTGKFIIPTLNNLASIWFLALFISIIATSVLELRWSGVSIQDLWRNEQFWV 2783
Query: 280 IGGVSSHLFAVFQGLLXVIAGVDTSXTXTSKGGDDDEFSELYL 408
IGGVS+HLFAVFQGLL V+ GVDT+ T TSK DD EF ELYL
Sbjct: 2784 IGGVSAHLFAVFQGLLKVLGGVDTNFTVTSKSADDAEFGELYL 2912
>gb|DV466097.1|DV466097 MTUNUL1.P47.C03 NUL Populus fremontii x Populus angustifolia cDNA,
mRNA sequence
Length = 857
Score = 149 bits (320), Expect(2) = 4e-039
Identities = 56/83 (67%), Positives = 69/83 (83%)
Frame = +1 / +2
Query: 139 FHLLQLNNVASLWFMSLFICIFATSILXMRWSGVGIDDWWRNEQFWVIGGVSSHLFAVFQ 318
F + +++N A +WF+ LFI IFAT IL +RWSGVGI+DWWRNEQFWVIGG S+HLFAVFQ
Sbjct: 59 FIIPEISNYAGMWFILLFISIFATGILELRWSGVGIEDWWRNEQFWVIGGTSAHLFAVFQ 238
Query: 319 GLLXVIAGVDTSXTXTSKGGDDD 387
GLL V+AG+DT+ T TSK D+D
Sbjct: 239 GLLKVLAGIDTNFTVTSKASDED 307
Score = 103 bits (220), Expect(2) = 1e-024
Identities = 44/66 (66%), Positives = 50/66 (75%)
Frame = -1 / -3
Query: 371 FDVXVXLVSTPAMTXRSP*NTAKRCEDTPPMTQNCSFLHQSSIPTPLHLIXRMLVAKMQI 192
F+V V LVS PA T +SP TAKR D PP+TQNCSFLHQSSIPTPLHL + VAKM++
Sbjct: 291 FEVTVKLVSIPASTFKSPWKTAKR*ADVPPITQNCSFLHQSSIPTPLHLSSSIPVAKMEM 112
Query: 191 KSDMNH 174
K MNH
Sbjct: 111 KRRMNH 94
Score = 31.3 bits (62), Expect(2) = 4e-039
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = +1 / +2
Query: 10 AICLLTGKFITPEV 51
AICL+TGKFI PE+
Sbjct: 35 AICLVTGKFIIPEI 76
Score = 28.6 bits (56), Expect(2) = 1e-024
Identities = 10/13 (76%), Positives = 12/13 (92%)
Frame = -1 / -3
Query: 47 SGVINFPVNKQMA 9
SG+INFPV +QMA
Sbjct: 72 SGIINFPVTRQMA 34
>gb|BU896705.1|BU896705 X044E08 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 718
Score = 160 bits (344), Expect = 4e-039
Identities = 66/103 (64%), Positives = 78/103 (75%)
Frame = +1 / +2
Query: 100 FCLLWNV*TLCSLFHLLQLNNVASLWFMSLFICIFATSILXMRWSGVGIDDWWRNEQFWV 279
+C + V L F + LNN+AS+WF++LFI I ATS+L +RWSGV I D WRNEQFWV
Sbjct: 281 YCTIPAVCLLTGKFIIPTLNNLASIWFLALFISIVATSVLELRWSGVSIQDLWRNEQFWV 460
Query: 280 IGGVSSHLFAVFQGLLXVIAGVDTSXTXTSKGGDDDEFSELYL 408
IGGVS+HLFAVFQGLL V+ GVDT+ T TSK DD EF ELYL
Sbjct: 461 IGGVSAHLFAVFQGLLKVLGGVDTNFTVTSKSADDAEFGELYL 589
>gb|CF234438.1|CF234438 Ptajxojxo2F10F1012 Poplar cDNA library from young opposite xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 772
Score = 158 bits (340), Expect = 2e-038
Identities = 60/78 (76%), Positives = 70/78 (89%)
Frame = +1 / +2
Query: 154 LNNVASLWFMSLFICIFATSILXMRWSGVGIDDWWRNEQFWVIGGVSSHLFAVFQGLLXV 333
L+N+AS+WF+SLF+ IFAT IL MRWSGVGID+WWRNEQFWVIGGVS+HLFAVFQGLL V
Sbjct: 11 LDNIASIWFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSAHLFAVFQGLLKV 190
Query: 334 IAGVDTSXTXTSKGGDDD 387
+AG+DTS T TSK D+D
Sbjct: 191 LAGIDTSFTVTSKSSDED 244
Score = 104 bits (222), Expect = 3e-022
Identities = 45/70 (64%), Positives = 52/70 (74%)
Frame = -1 / -2
Query: 368 DVXVXLVSTPAMTXRSP*NTAKRCEDTPPMTQNCSFLHQSSIPTPLHLIXRMLVAKMQIK 189
DV V LVS PA T P TAKR +TPP+TQNCSFLH SSIPTPLHLI ++ VAKM+ K
Sbjct: 225 DVTVKLVSMPASTLSKPWKTAKRWAETPPITQNCSFLHHSSIPTPLHLISKIPVAKMERK 46
Query: 188 SDMNHRLATL 159
++NH LA L
Sbjct: 45 REINHILAML 16
>gb|CV227633.1|CV227633 WS0167.B21_M03 PT-DX-A-7 Populus trichocarpa cDNA clone WS0167_M03
3', mRNA sequence
Length = 823
Score = 158 bits (339), Expect = 2e-038
Identities = 64/94 (68%), Positives = 74/94 (78%)
Frame = +1 / -1
Query: 127 LCSLFHLLQLNNVASLWFMSLFICIFATSILXMRWSGVGIDDWWRNEQFWVIGGVSSHLF 306
L F + LNN+AS+WF++LFI I ATS+L +RWSGV I D WRNEQFWVIGGVS+HLF
Sbjct: 823 LTGKFIIPTLNNLASIWFLALFISIIATSVLELRWSGVSIQDLWRNEQFWVIGGVSAHLF 644
Query: 307 AVFQGLLXVIAGVDTSXTXTSKGGDDDEFSELYL 408
AVFQGLL V+ GVDT+ T TSK DD EF ELYL
Sbjct: 643 AVFQGLLKVLGGVDTNFTVTSKSADDAEFGELYL 542
>gb|DT475055.1|DT475055 WS0125.BR_N16 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS0125_N16 5', mRNA sequence
Length = 595
Score = 158 bits (339), Expect = 2e-038
Identities = 65/103 (63%), Positives = 78/103 (75%)
Frame = +1 / +2
Query: 100 FCLLWNV*TLCSLFHLLQLNNVASLWFMSLFICIFATSILXMRWSGVGIDDWWRNEQFWV 279
+C L + L F + +++N AS+ FM+LFI I AT IL M+W GVGIDDWWRNEQFWV
Sbjct: 107 YCTLPAICLLTGKFIVPEISNYASIVFMALFISIAATGILEMQWGGVGIDDWWRNEQFWV 286
Query: 280 IGGVSSHLFAVFQGLLXVIAGVDTSXTXTSKGGDDDEFSELYL 408
IGG S+HLFA+FQGLL V+AGV T+ T TSK DD EFSELYL
Sbjct: 287 IGGASAHLFALFQGLLKVLAGVSTNFTVTSKAADDGEFSELYL 415
Score = 85.8 bits (181), Expect(2) = 6e-023
Identities = 37/81 (45%), Positives = 50/81 (61%)
Frame = +3 / +1
Query: 165 CQPVVHVTFYLHFCYKHPXNEMEWCWD**LVEE*AVLGHWRCVLAPLRCVSGTSXGHSWC 344
CQ VH +++ C +P + + WCW+ *LVE+*A+LG WRC P + G + G C
Sbjct: 172 CQYCVHGPLHIYSCNWYPRDAVGWCWNR*LVEK*AILGDWRCFGTPFCSLPGFAQGFGRC 351
Query: 345 *YKLHXDIKGWR**RILRAVP 407
+KLH DIK * RILRA+P
Sbjct: 352 QHKLHCDIKSSG*RRILRALP 414
Score = 40.5 bits (82), Expect(2) = 6e-023
Identities = 15/17 (88%), Positives = 16/17 (94%)
Frame = +1 / +2
Query: 1 TLPAICLLTGKFITPEV 51
TLPAICLLTGKFI PE+
Sbjct: 113 TLPAICLLTGKFIVPEI 163
>gb|DT475135.1|DT475135 WS0126.BR_C03 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS0126_C03 5', mRNA sequence
Length = 471
Score = 158 bits (339), Expect = 2e-038
Identities = 65/103 (63%), Positives = 78/103 (75%)
Frame = +1 / +2
Query: 100 FCLLWNV*TLCSLFHLLQLNNVASLWFMSLFICIFATSILXMRWSGVGIDDWWRNEQFWV 279
+C L + L F + +++N AS+ FM+LFI I AT IL M+W GVGIDDWWRNEQFWV
Sbjct: 107 YCTLPAICLLTGKFIVPEISNYASIVFMALFISIAATGILEMQWGGVGIDDWWRNEQFWV 286
Query: 280 IGGVSSHLFAVFQGLLXVIAGVDTSXTXTSKGGDDDEFSELYL 408
IGG S+HLFA+FQGLL V+AGV T+ T TSK DD EFSELYL
Sbjct: 287 IGGASAHLFALFQGLLKVLAGVSTNFTVTSKAADDGEFSELYL 415
Score = 85.8 bits (181), Expect(2) = 4e-023
Identities = 37/81 (45%), Positives = 50/81 (61%)
Frame = +3 / +1
Query: 165 CQPVVHVTFYLHFCYKHPXNEMEWCWD**LVEE*AVLGHWRCVLAPLRCVSGTSXGHSWC 344
CQ VH +++ C +P + + WCW+ *LVE+*A+LG WRC P + G + G C
Sbjct: 172 CQYCVHGPLHIYSCNWYPRDAVGWCWNR*LVEK*AILGDWRCFGTPFCSLPGFAQGFGRC 351
Query: 345 *YKLHXDIKGWR**RILRAVP 407
+KLH DIK * RILRA+P
Sbjct: 352 QHKLHCDIKSSG*RRILRALP 414
Score = 40.5 bits (82), Expect(2) = 4e-023
Identities = 15/17 (88%), Positives = 16/17 (94%)
Frame = +1 / +2
Query: 1 TLPAICLLTGKFITPEV 51
TLPAICLLTGKFI PE+
Sbjct: 113 TLPAICLLTGKFIVPEI 163
>gb|BI128528.1|BI128528 G077P53Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 382
Score = 157 bits (338), Expect = 3e-038
Identities = 63/90 (70%), Positives = 73/90 (81%)
Frame = +1 / +1
Query: 139 FHLLQLNNVASLWFMSLFICIFATSILXMRWSGVGIDDWWRNEQFWVIGGVSSHLFAVFQ 318
F + LNN+AS+WF++LFI I ATS+L +RWSGV I D WRNEQFWVIGGVS+HLFAVFQ
Sbjct: 1 FIIPTLNNLASIWFLALFISIIATSVLELRWSGVSIQDLWRNEQFWVIGGVSAHLFAVFQ 180
Query: 319 GLLXVIAGVDTSXTXTSKGGDDDEFSELYL 408
GLL V+ GVDT+ T TSK DD EF ELYL
Sbjct: 181 GLLKVLGGVDTNFTVTSKSADDAEFGELYL 270
>gb|CF233341.1|CF233341 PtaJXO0022B5B0503 Poplar cDNA library from young opposite xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 656
Score = 157 bits (338), Expect = 3e-038
Identities = 63/90 (70%), Positives = 73/90 (81%)
Frame = +1 / +1
Query: 139 FHLLQLNNVASLWFMSLFICIFATSILXMRWSGVGIDDWWRNEQFWVIGGVSSHLFAVFQ 318
F + LNN+AS+WF++LFI I ATS+L +RWSGV I D WRNEQFWVIGGVS+HLFAVFQ
Sbjct: 13 FIIPTLNNLASIWFLALFISIIATSVLELRWSGVSIQDLWRNEQFWVIGGVSAHLFAVFQ 192
Query: 319 GLLXVIAGVDTSXTXTSKGGDDDEFSELYL 408
GLL V+ GVDT+ T TSK DD EF ELYL
Sbjct: 193 GLLKVLGGVDTNFTVTSKSADDAEFGELYL 282
>gb|AY573572.1| Populus tremula x Populus tremuloides cellulose synthase (CesA2)
mRNA, complete cds
Length = 3991
Score = 157 bits (337), Expect = 4e-038
Identities = 66/103 (64%), Positives = 78/103 (75%)
Frame = +1 / +2
Query: 100 FCLLWNV*TLCSLFHLLQLNNVASLWFMSLFICIFATSILXMRWSGVGIDDWWRNEQFWV 279
+C L V L F + +++N AS+ FM+LFI I AT IL M+W GVGI DWWRNEQFWV
Sbjct: 3104 YCTLPAVCLLTGKFIVPEISNYASIIFMALFISIAATGILEMQWGGVGIHDWWRNEQFWV 3283
Query: 280 IGGVSSHLFAVFQGLLXVIAGVDTSXTXTSKGGDDDEFSELYL 408
IGG SSHLFA+FQGLL V+AGV+T+ T TSK DD EFSELYL
Sbjct: 3284 IGGASSHLFALFQGLLKVLAGVNTNFTVTSKAADDGEFSELYL 3412
>gb|CF236377.1|CF236377 PtaJXT2B10B1004 Poplar cDNA library from young tension xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 651
Score = 156 bits (336), Expect = 5e-038
Identities = 65/103 (63%), Positives = 77/103 (74%)
Frame = +1 / +2
Query: 100 FCLLWNV*TLCSLFHLLQLNNVASLWFMSLFICIFATSILXMRWSGVGIDDWWRNEQFWV 279
+C + V L F + LNN+AS+WF++LFI I ATS+L +RWSGV I D WRNEQFWV
Sbjct: 197 YCTIPAVCLLTGKFIIPTLNNLASIWFLALFISIIATSVLELRWSGVSIHDLWRNEQFWV 376
Query: 280 IGGVSSHLFAVFQGLLXVIAGVDTSXTXTSKGGDDDEFSELYL 408
IGGVS+HLFAVFQGLL V+ GVDT+ T TSK DD E ELYL
Sbjct: 377 IGGVSTHLFAVFQGLLKVLGGVDTNFTVTSKSXDDAEXGELYL 505
>gb|CV226017.1|CV226017 WS0163.B21_A20 PT-DX-A-7 Populus trichocarpa cDNA clone WS0163_A20
3', mRNA sequence
Length = 807
Score = 155 bits (333), Expect = 1e-037
Identities = 61/84 (72%), Positives = 70/84 (83%)
Frame = +1 / -2
Query: 157 NNVASLWFMSLFICIFATSILXMRWSGVGIDDWWRNEQFWVIGGVSSHLFAVFQGLLXVI 336
NN+AS+WF++LFI I ATS+L +RWSGV I D WRNEQFWVIGGVS+HLFAVFQGLL V+
Sbjct: 806 NNLASIWFLALFISIIATSVLELRWSGVSIQDLWRNEQFWVIGGVSAHLFAVFQGLLKVL 627
Query: 337 AGVDTSXTXTSKGGDDDEFSELYL 408
GVDT+ T TSK DD EF ELYL
Sbjct: 626 GGVDTNFTVTSKSADDAEFGELYL 555
>gb|CB239511.1|CB239511 RSH12F10 two-month-old roots from clone 'Beaupre' grown for 19 days
under restricted irrigation Populus trichocarpa x
Populus deltoides cDNA 5', mRNA sequence
Length = 606
Score = 155 bits (332), Expect = 2e-037
Identities = 60/96 (62%), Positives = 76/96 (79%)
Frame = +1 / +3
Query: 100 FCLLWNV*TLCSLFHLLQLNNVASLWFMSLFICIFATSILXMRWSGVGIDDWWRNEQFWV 279
+C+L V + F + +++N AS+WF+ LFI IFAT IL +RWSGVGI+DWWRNEQFWV
Sbjct: 270 YCVLPAVCLVSGKFIIPEISNYASMWFILLFISIFATGILELRWSGVGIEDWWRNEQFWV 449
Query: 280 IGGVSSHLFAVFQGLLXVIAGVDTSXTXTSKGGDDD 387
IGG S+HLFAVFQGLL V+AG+DT+ T TSK D+D
Sbjct: 450 IGGTSAHLFAVFQGLLKVLAGIDTNFTVTSKASDED 557
Score = 113 bits (241), Expect(2) = 3e-027
Identities = 49/69 (71%), Positives = 54/69 (78%)
Frame = -1 / -3
Query: 371 FDVXVXLVSTPAMTXRSP*NTAKRCEDTPPMTQNCSFLHQSSIPTPLHLIXRMLVAKMQI 192
F+V V LVS PA T +SP* TAKR D PPMTQNCSFLHQSSIPTPLHL + VAKM++
Sbjct: 541 FEVTVKLVSIPASTFKSP*KTAKR*ADVPPMTQNCSFLHQSSIPTPLHLSSSIPVAKMEM 362
Query: 191 KSDMNHRLA 165
KS MNH LA
Sbjct: 361 KSRMNHMLA 335
Score = 27.6 bits (54), Expect(2) = 3e-027
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = -1 / -3
Query: 47 SGVINFPVNKQMAGN 3
SG+INFP+ +Q AG+
Sbjct: 322 SGIINFPLTRQTAGS 278
>gb|AY162181.1| Populus tremuloides cellulose synthase (CesA4) mRNA, complete cds
Length = 3640
Score = 155 bits (332), Expect = 2e-037
Identities = 60/96 (62%), Positives = 76/96 (79%)
Frame = +1 / +1
Query: 100 FCLLWNV*TLCSLFHLLQLNNVASLWFMSLFICIFATSILXMRWSGVGIDDWWRNEQFWV 279
+C+L V + F + +++N AS+WF+ LFI IFAT IL +RWSGVGI+DWWRNEQFWV
Sbjct: 2644 YCVLPAVCLVSGKFIIPEISNYASMWFILLFISIFATGILELRWSGVGIEDWWRNEQFWV 2823
Query: 280 IGGVSSHLFAVFQGLLXVIAGVDTSXTXTSKGGDDD 387
IGG S+HLFAVFQGLL V+AG+DT+ T TSK D+D
Sbjct: 2824 IGGTSAHLFAVFQGLLKVLAGIDTNFTVTSKASDED 2931
Score = 113 bits (241), Expect(2) = 3e-027
Identities = 49/69 (71%), Positives = 54/69 (78%)
Frame = -1 / -3
Query: 371 FDVXVXLVSTPAMTXRSP*NTAKRCEDTPPMTQNCSFLHQSSIPTPLHLIXRMLVAKMQI 192
F+V V LVS PA T +SP* TAKR D PPMTQNCSFLHQSSIPTPLHL + VAKM++
Sbjct: 2915 FEVTVKLVSIPASTFKSP*KTAKR*ADVPPMTQNCSFLHQSSIPTPLHLSSSIPVAKMEM 2736
Query: 191 KSDMNHRLA 165
KS MNH LA
Sbjct: 2735 KSRMNHMLA 2709
Score = 27.6 bits (54), Expect(2) = 3e-027
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = -1 / -3
Query: 47 SGVINFPVNKQMAGN 3
SG+INFP+ +Q AG+
Sbjct: 2696 SGIINFPLTRQTAGS 2652
>gb|CK320732.1|CK320732 X9SP01b11 Populus stem seasonal library Populus deltoides cDNA,
mRNA sequence
Length = 769
Score = 154 bits (330), Expect = 4e-037
Identities = 61/95 (64%), Positives = 75/95 (78%)
Frame = +1 / +2
Query: 100 FCLLWNV*TLCSLFHLLQLNNVASLWFMSLFICIFATSILXMRWSGVGIDDWWRNEQFWV 279
+C L V L F + Q++N+AS+WF+SLF+ IFAT IL MRWSGVGID+WWRNEQFWV
Sbjct: 125 YCTLPAVCLLTGKFIIPQISNIASIWFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWV 304
Query: 280 IGGVSSHLFAVFQGLLXVIAGVDTSXTXTSKGGDD 384
IGGVS+HLFAVFQGLL V+AG+ + T TSK D+
Sbjct: 305 IGGVSAHLFAVFQGLLKVLAGIYLNFTVTSKASDE 409
Score = 100 bits (214), Expect = 4e-021
Identities = 48/90 (53%), Positives = 55/90 (61%)
Frame = -1 / -2
Query: 371 FDVXVXLVSTPAMTXRSP*NTAKRCEDTPPMTQNCSFLHQSSIPTPLHLIXRMLVAKMQI 192
F+V V PA T P TAKR DTPP+TQNCSFLH SSIPTPLHLI ++ VAK++
Sbjct: 396 FEVTVKFKYIPARTFSRPWKTAKR*ADTPPITQNCSFLHHSSIPTPLHLISKIPVAKIER 217
Query: 191 KSDMNHRLATLFSCSR*NSEHKVQTFHNKQ 102
K DMN LA L C N + T N Q
Sbjct: 216 KRDMNQILAMLLICGIMNFPVRRHTAGNVQ 127
>gb|CA925680.1|CA925680 MTU7TL.P4.E11 Aspen leaf cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 708
Score = 153 bits (328), Expect = 7e-037
Identities = 58/96 (60%), Positives = 75/96 (78%)
Frame = +1 / -3
Query: 100 FCLLWNV*TLCSLFHLLQLNNVASLWFMSLFICIFATSILXMRWSGVGIDDWWRNEQFWV 279
+C+L + + F + +++N A +WF+ LFI IFAT IL +RWSGVGI+DWWRNEQFWV
Sbjct: 406 YCILPAICLVTGKFIIPEISNYAGMWFILLFISIFATGILELRWSGVGIEDWWRNEQFWV 227
Query: 280 IGGVSSHLFAVFQGLLXVIAGVDTSXTXTSKGGDDD 387
IGG S+HLFAVFQGLL V+AG+DT+ T TSK D+D
Sbjct: 226 IGGTSAHLFAVFQGLLKVLAGIDTNFTVTSKASDED 119
Score = 103 bits (220), Expect(2) = 1e-025
Identities = 44/66 (66%), Positives = 50/66 (75%)
Frame = -1 / +3
Query: 371 FDVXVXLVSTPAMTXRSP*NTAKRCEDTPPMTQNCSFLHQSSIPTPLHLIXRMLVAKMQI 192
F+V V LVS PA T +SP TAKR D PP+TQNCSFLHQSSIPTPLHL + VAKM++
Sbjct: 135 FEVTVKLVSIPASTFKSPWKTAKR*ADVPPITQNCSFLHQSSIPTPLHLSSSIPVAKMEM 314
Query: 191 KSDMNH 174
K MNH
Sbjct: 315 KRRMNH 332
Score = 31.8 bits (63), Expect(2) = 1e-025
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = -1 / +3
Query: 47 SGVINFPVNKQMAGN 3
SG+INFPV +QMAG+
Sbjct: 354 SGIINFPVTRQMAGS 398
>gb|CN550567.1|CN550567 GQ0241.B3_I15 GQ024 Populus trichocarpa x Populus deltoides cDNA
clone GQ0241_I15 5', mRNA sequence
Length = 777
Score = 153 bits (328), Expect = 7e-037
Identities = 60/102 (58%), Positives = 78/102 (76%)
Frame = +1 / +1
Query: 100 FCLLWNV*TLCSLFHLLQLNNVASLWFMSLFICIFATSILXMRWSGVGIDDWWRNEQFWV 279
+C L + L F + +++ ASL+F+ LF+ IF+T IL +RWSGV I++WWRNEQFWV
Sbjct: 7 YCCLPAICLLTDKFIMPEISTFASLFFIGLFLSIFSTGILELRWSGVSIEEWWRNEQFWV 186
Query: 280 IGGVSSHLFAVFQGLLXVIAGVDTSXTXTSKGGDDDEFSELY 405
IGGVS+HLFAV QGLL V+AG+DT+ T TSK DDD+F ELY
Sbjct: 187 IGGVSAHLFAVVQGLLKVLAGIDTNFTVTSKATDDDDFGELY 312
>gb|AI162850.1|AI162850 A025P50U Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA 5', mRNA sequence
Length = 464
Score = 152 bits (326), Expect = 1e-036
Identities = 60/85 (70%), Positives = 69/85 (81%)
Frame = +1 / +2
Query: 154 LNNVASLWFMSLFICIFATSILXMRWSGVGIDDWWRNEQFWVIGGVSSHLFAVFQGLLXV 333
LNN+AS+WF++LFI I ATS+L +RWSGV D WRN QFWVIGGVS+HLFAVFQGLL V
Sbjct: 29 LNNLASIWFLALFISIIATSVLELRWSGVSXQDLWRNXQFWVIGGVSAHLFAVFQGLLKV 208
Query: 334 IAGVDTSXTXTSKGGDDDEFSELYL 408
+ GVDT+ T TSK DD EF ELYL
Sbjct: 209 LGGVDTNFTVTSKSADDAEFGELYL 283
>gb|BU830997.1|BU830997 T015G10 Populus apical shoot cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 354
Score = 151 bits (324), Expect = 2e-036
Identities = 62/94 (65%), Positives = 73/94 (77%)
Frame = +1 / +1
Query: 127 LCSLFHLLQLNNVASLWFMSLFICIFATSILXMRWSGVGIDDWWRNEQFWVIGGVSSHLF 306
L F + +++N AS+ FM+LFI I AT IL M+W GVGIDDWW NEQFWVIGG S+HLF
Sbjct: 19 LTGKFIVPEISNYASIVFMALFISIAATGILEMQWGGVGIDDWWINEQFWVIGGASAHLF 198
Query: 307 AVFQGLLXVIAGVDTSXTXTSKGGDDDEFSELYL 408
A+FQGLL V+AGV T+ T TSK DD EFSELYL
Sbjct: 199 ALFQGLLKVLAGVSTNFTVTSKAADDGEFSELYL 300
Score = 84.9 bits (179), Expect(2) = 2e-022
Identities = 36/81 (44%), Positives = 50/81 (61%)
Frame = +3 / +3
Query: 165 CQPVVHVTFYLHFCYKHPXNEMEWCWD**LVEE*AVLGHWRCVLAPLRCVSGTSXGHSWC 344
CQ VH +++ C +P + + WCW+ *LV++*A+LG W C P + G + G C
Sbjct: 57 CQYCVHGPLHIYSCNWYPRDAVGWCWNR*LVDK*AILGDWGCFGTPFCSLPGFAQGFGRC 236
Query: 345 *YKLHXDIKGWR**RILRAVP 407
+KLH DIK R* RILRA+P
Sbjct: 237 QHKLHCDIKSGR*RRILRALP 299
Score = 38.2 bits (77), Expect(2) = 2e-022
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = +1 / +1
Query: 4 LPAICLLTGKFITPEV 51
LPAICLLTGKFI PE+
Sbjct: 1 LPAICLLTGKFIVPEI 48
>gb|CF232388.1|CF232388 PtaJXO0009H2H0216 Poplar cDNA library from young opposite xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 629
Score = 151 bits (324), Expect = 2e-036
Identities = 57/86 (66%), Positives = 73/86 (84%)
Frame = +1 / +3
Query: 148 LQLNNVASLWFMSLFICIFATSILXMRWSGVGIDDWWRNEQFWVIGGVSSHLFAVFQGLL 327
+Q++ ASL+F++LF+ IF+T IL +RWSGV I++WWRNEQFWVIGGVS+HLFAV QGLL
Sbjct: 69 IQISTFASLFFIALFLSIFSTGILELRWSGVSIEEWWRNEQFWVIGGVSAHLFAVVQGLL 248
Query: 328 XVIAGVDTSXTXTSKGGDDDEFSELY 405
V+AG+DT+ T TSK DDD+F ELY
Sbjct: 249 KVLAGIDTNFTVTSKATDDDDFGELY 326
>gb|DT487943.1|DT487943 WS02535.B21_B11 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02535_B11 3', mRNA sequence
Length = 720
Score = 151 bits (324), Expect = 2e-036
Identities = 57/87 (65%), Positives = 73/87 (83%)
Frame = +1 / +1
Query: 145 LLQLNNVASLWFMSLFICIFATSILXMRWSGVGIDDWWRNEQFWVIGGVSSHLFAVFQGL 324
++Q++ ASL+F+ LF+ IF+T IL +RWSGV I++WWRNEQFWVIGGVS+HLFAV QGL
Sbjct: 211 VIQISTFASLFFIGLFLSIFSTGILELRWSGVSIEEWWRNEQFWVIGGVSAHLFAVVQGL 390
Query: 325 LXVIAGVDTSXTXTSKGGDDDEFSELY 405
L V+AG+DT+ T TSK DDD+F ELY
Sbjct: 391 LKVLAGIDTNFTVTSKATDDDDFGELY 471
>gb|AY095297.1| Populus tremuloides cellulose synthase (CesA2) mRNA, complete cds
Length = 3277
Score = 150 bits (323), Expect = 3e-036
Identities = 59/102 (57%), Positives = 78/102 (76%)
Frame = +1 / +3
Query: 100 FCLLWNV*TLCSLFHLLQLNNVASLWFMSLFICIFATSILXMRWSGVGIDDWWRNEQFWV 279
+C L + L F + +++ ASL+F++LF+ IF+T IL +RWSGV I++WWRNEQFWV
Sbjct: 2484 YCCLPAICLLTDKFIMPEISTFASLFFIALFLSIFSTGILELRWSGVSIEEWWRNEQFWV 2663
Query: 280 IGGVSSHLFAVFQGLLXVIAGVDTSXTXTSKGGDDDEFSELY 405
IGGVS+HLFAV QGLL V+AG+D + T TSK DDD+F ELY
Sbjct: 2664 IGGVSAHLFAVVQGLLKVLAGIDLNFTVTSKATDDDDFGELY 2789
>gb|AJ778476.1|AJ778476 AJ778476 Populus euphratica cambium 3-6 months Populus euphratica
cDNA clone P0000600001D07F1, mRNA sequence
Length = 677
Score = 150 bits (322), Expect = 5e-036
Identities = 58/96 (60%), Positives = 74/96 (77%)
Frame = +1 / +3
Query: 100 FCLLWNV*TLCSLFHLLQLNNVASLWFMSLFICIFATSILXMRWSGVGIDDWWRNEQFWV 279
+C+L V + F + +++N AS+WF+ LFI IFAT IL +RWSGVGI+DWWRNEQFWV
Sbjct: 378 YCVLPAVCLVSGKFIIPEISNYASMWFILLFISIFATGILELRWSGVGIEDWWRNEQFWV 557
Query: 280 IGGVSSHLFAVFQGLLXVIAGVDTSXTXTSKGGDDD 387
IGG S+H FAVFQGLL V+AG+DT+ T SK D+D
Sbjct: 558 IGGTSAHFFAVFQGLLKVLAGIDTNFTVPSKASDED 665
Score = 108 bits (231), Expect(2) = 6e-026
Identities = 47/69 (68%), Positives = 53/69 (76%)
Frame = -1 / -2
Query: 371 FDVXVXLVSTPAMTXRSP*NTAKRCEDTPPMTQNCSFLHQSSIPTPLHLIXRMLVAKMQI 192
F+ V LVS PA T +SP* TAK+ D PPMTQNCSFLHQSSIPTPLHL + VAKM++
Sbjct: 649 FEGTVKLVSIPASTFKSP*KTAKK*ADVPPMTQNCSFLHQSSIPTPLHLSSSIPVAKMEM 470
Query: 191 KSDMNHRLA 165
KS MNH LA
Sbjct: 469 KSRMNHMLA 443
Score = 27.6 bits (54), Expect(2) = 6e-026
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = -1 / -2
Query: 47 SGVINFPVNKQMAGN 3
SG+INFP+ +Q AG+
Sbjct: 430 SGIINFPLTRQTAGS 386
>gb|AJ774508.1|AJ774508 AJ774508 Populus euphratica shoot 3-6 months Populus euphratica
cDNA clone P0000300021B12F1, mRNA sequence
Length = 655
Score = 148 bits (317), Expect = 2e-035
Identities = 57/93 (61%), Positives = 74/93 (79%)
Frame = +1 / +1
Query: 127 LCSLFHLLQLNNVASLWFMSLFICIFATSILXMRWSGVGIDDWWRNEQFWVIGGVSSHLF 306
L F + +++ ASL+F+ LF+ IF+T IL +RWSGV I++WWRNEQFWVIGGVS+HLF
Sbjct: 22 LTDKFIMPEISTFASLFFIGLFLSIFSTGILELRWSGVSIEEWWRNEQFWVIGGVSAHLF 201
Query: 307 AVFQGLLXVIAGVDTSXTXTSKGGDDDEFSELY 405
AV QGLL V+AG+DT+ T TSK DD++F ELY
Sbjct: 202 AVVQGLLKVLAGIDTNFTVTSKATDDEDFGELY 300
>gb|AY573573.2| Populus tremula x Populus tremuloides cellulose synthase (CesA3-1)
mRNA, complete cds
Length = 3250
Score = 146 bits (313), Expect = 8e-035
Identities = 58/103 (56%), Positives = 76/103 (73%)
Frame = +1 / +2
Query: 100 FCLLWNV*TLCSLFHLLQLNNVASLWFMSLFICIFATSILXMRWSGVGIDDWWRNEQFWV 279
+C + V L F + L+N+AS+ F+ LFI I T++L +RWSGV I+D WRNEQFWV
Sbjct: 2342 YCTIPAVCLLTGKFIIPTLSNLASMLFLGLFISIIVTAVLELRWSGVSIEDLWRNEQFWV 2521
Query: 280 IGGVSSHLFAVFQGLLXVIAGVDTSXTXTSKGGDDDEFSELYL 408
IGGVS+HLFAVFQG L ++AG+DT+ T T+K DD EF ELY+
Sbjct: 2522 IGGVSAHLFAVFQGFLKMLAGIDTNFTVTAKAADDTEFGELYM 2650
>gb|CF235000.1|CF235000 PtaJXT0017F7F0711 Poplar cDNA library from young tension xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 770
Score = 144 bits (309), Expect = 3e-034
Identities = 57/103 (55%), Positives = 76/103 (73%)
Frame = +1 / +1
Query: 100 FCLLWNV*TLCSLFHLLQLNNVASLWFMSLFICIFATSILXMRWSGVGIDDWWRNEQFWV 279
+C + V L F + L+N+AS+ F+ LFI I T++L +RWSGV I+D WRNEQFWV
Sbjct: 19 YCTIPAVCLLTGKFIIPTLSNLASMLFLGLFISIIVTAVLELRWSGVSIEDLWRNEQFWV 198
Query: 280 IGGVSSHLFAVFQGLLXVIAGVDTSXTXTSKGGDDDEFSELYL 408
IGGVS+HLFAVFQG L ++AG+DT+ T T+K +D EF ELY+
Sbjct: 199 IGGVSAHLFAVFQGFLKMLAGIDTNFTVTAKAAEDTEFGELYM 327
>gb|BI128887.1|BI128887 G083P04Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 484
Score = 144 bits (308), Expect = 4e-034
Identities = 57/103 (55%), Positives = 76/103 (73%)
Frame = +1 / +3
Query: 100 FCLLWNV*TLCSLFHLLQLNNVASLWFMSLFICIFATSILXMRWSGVGIDDWWRNEQFWV 279
+C + V L F + L+N+AS+ F+ LFI I T++L +RWSGV I+D WRNEQFWV
Sbjct: 78 YCTIPAVCLLTGKFIIPTLSNLASMLFLGLFISIIVTAVLELRWSGVSIEDLWRNEQFWV 257
Query: 280 IGGVSSHLFAVFQGLLXVIAGVDTSXTXTSKGGDDDEFSELYL 408
IGGVS+HLFAVFQG L ++AG+DT+ T T+K +D EF ELY+
Sbjct: 258 IGGVSAHLFAVFQGFLKMLAGIDTNFTVTAKAAEDAEFGELYM 386
>gb|CK092990.1|CK092990 G103P13.3pR Populus tension wood cDNA library Populus tremula x
Populus tremuloides cDNA clone G103P13 3', mRNA sequence
Length = 724
Score = 144 bits (308), Expect = 4e-034
Identities = 57/103 (55%), Positives = 76/103 (73%)
Frame = +1 / +1
Query: 100 FCLLWNV*TLCSLFHLLQLNNVASLWFMSLFICIFATSILXMRWSGVGIDDWWRNEQFWV 279
+C + V L F + L+N+AS+ F+ LFI I T++L +RWSGV I+D WRNEQFWV
Sbjct: 88 YCTIPAVCLLTGKFIIPTLSNLASMLFLGLFISIIVTAVLELRWSGVSIEDLWRNEQFWV 267
Query: 280 IGGVSSHLFAVFQGLLXVIAGVDTSXTXTSKGGDDDEFSELYL 408
IGGVS+HLFAVFQG L ++AG+DT+ T T+K +D EF ELY+
Sbjct: 268 IGGVSAHLFAVFQGFLKMLAGIDTNFTVTAKAAEDAEFGELYM 396
>gb|DN493622.1|DN493622 G071P10.5pR Populus tension wood cDNA library Populus tremula x
Populus tremuloides cDNA clone G071P10 5', mRNA sequence
Length = 682
Score = 144 bits (308), Expect = 4e-034
Identities = 57/103 (55%), Positives = 76/103 (73%)
Frame = +1 / +3
Query: 100 FCLLWNV*TLCSLFHLLQLNNVASLWFMSLFICIFATSILXMRWSGVGIDDWWRNEQFWV 279
+C + V L F + L+N+AS+ F+ LFI I T++L +RWSGV I+D WRNEQFWV
Sbjct: 174 YCTIPAVCLLTGKFIIPTLSNLASMLFLGLFISIIVTAVLELRWSGVSIEDLWRNEQFWV 353
Query: 280 IGGVSSHLFAVFQGLLXVIAGVDTSXTXTSKGGDDDEFSELYL 408
IGGVS+HLFAVFQG L ++AG+DT+ T T+K +D EF ELY+
Sbjct: 354 IGGVSTHLFAVFQGFLKMLAGIDTNFTVTAKAAEDAEFGELYM 482
>gb|AF072131.1|AF072131 Populus tremuloides secondary xylem cellulose synthase (celA) mRNA,
complete cds
Length = 3232
Score = 144 bits (308), Expect = 4e-034
Identities = 57/103 (55%), Positives = 76/103 (73%)
Frame = +1 / +3
Query: 100 FCLLWNV*TLCSLFHLLQLNNVASLWFMSLFICIFATSILXMRWSGVGIDDWWRNEQFWV 279
+C + V L F + L+N+AS+ F+ LFI I T++L +RWSGV I+D WRNEQFWV
Sbjct: 2367 YCTIPAVCLLTGKFIIPTLSNLASMLFLGLFISIIVTAVLELRWSGVSIEDLWRNEQFWV 2546
Query: 280 IGGVSSHLFAVFQGLLXVIAGVDTSXTXTSKGGDDDEFSELYL 408
IGGVS+HLFAVFQG L ++AG+DT+ T T+K +D EF ELY+
Sbjct: 2547 IGGVSAHLFAVFQGFLKMLAGIDTNFTVTAKAAEDAEFGELYM 2675
>gb|AY573574.1| Populus tremula x Populus tremuloides cellulose synthase (CesA3-2)
mRNA, complete cds
Length = 3358
Score = 144 bits (308), Expect = 4e-034
Identities = 57/103 (55%), Positives = 76/103 (73%)
Frame = +1 / +1
Query: 100 FCLLWNV*TLCSLFHLLQLNNVASLWFMSLFICIFATSILXMRWSGVGIDDWWRNEQFWV 279
+C + V L F + L+N+AS+ F+ LFI I T++L +RWSGV I+D WRNEQFWV
Sbjct: 2425 YCTIPAVCLLTGKFIIPTLSNLASMLFLGLFISIIVTAVLELRWSGVSIEDLWRNEQFWV 2604
Query: 280 IGGVSSHLFAVFQGLLXVIAGVDTSXTXTSKGGDDDEFSELYL 408
IGGVS+HLFAVFQG L ++AG+DT+ T T+K +D EF ELY+
Sbjct: 2605 IGGVSAHLFAVFQGFLKMLAGIDTNFTVTAKAAEDAEFGELYM 2733
>gb|DQ004570.1| Populus tomentosa cellulose synthase (cesa1) mRNA, complete cds
Length = 3215
Score = 144 bits (308), Expect = 4e-034
Identities = 57/103 (55%), Positives = 76/103 (73%)
Frame = +1 / +1
Query: 100 FCLLWNV*TLCSLFHLLQLNNVASLWFMSLFICIFATSILXMRWSGVGIDDWWRNEQFWV 279
+C + V L F + L+N+AS+ F+ LFI I T++L +RWSGV I+D WRNEQFWV
Sbjct: 2350 YCTIPAVCLLTGKFIIPTLSNLASMLFLGLFISIIVTAVLELRWSGVSIEDLWRNEQFWV 2529
Query: 280 IGGVSSHLFAVFQGLLXVIAGVDTSXTXTSKGGDDDEFSELYL 408
IGGVS+HLFAVFQG L ++AG+DT+ T T+K +D EF ELY+
Sbjct: 2530 IGGVSAHLFAVFQGFLKMLAGIDTNFTVTAKAAEDAEFGELYM 2658
>gb|CF229187.1|CF229187 PtaXM0022D10D1008 Poplar cDNA library from mature xylem Populus
alba x Populus tremula cDNA 5', mRNA sequence
Length = 727
Score = 143 bits (306), Expect = 7e-034
Identities = 57/102 (55%), Positives = 75/102 (73%)
Frame = +1 / +2
Query: 103 CLLWNV*TLCSLFHLLQLNNVASLWFMSLFICIFATSILXMRWSGVGIDDWWRNEQFWVI 282
C + V L F + L+N+AS+ F+ LFI I T++L +RWSGV I+D WRNEQFWVI
Sbjct: 41 CTIPAVCLLTGKFIIPTLSNLASMLFLGLFISIIVTAVLELRWSGVSIEDLWRNEQFWVI 220
Query: 283 GGVSSHLFAVFQGLLXVIAGVDTSXTXTSKGGDDDEFSELYL 408
GGVS+HLFAVFQG L ++AG+DT+ T T+K +D EF ELY+
Sbjct: 221 GGVSAHLFAVFQGFLKMLAGIDTNFTVTAKAAEDTEFGELYM 346
>gb|CF232642.1|CF232642 PtaJXO0013H5H0515 Poplar cDNA library from young opposite xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 674
Score = 142 bits (304), Expect = 1e-033
Identities = 58/91 (63%), Positives = 70/91 (76%)
Frame = +1 / +3
Query: 100 FCLLWNV*TLCSLFHLLQLNNVASLWFMSLFICIFATSILXMRWSGVGIDDWWRNEQFWV 279
+C + V L F + LNN+AS+WF++LFI I ATS+L +RWSGV I D WRNEQFWV
Sbjct: 207 YCTIPAVCLLTGKFIIPTLNNLASIWFLALFISIIATSVLELRWSGVSIQDLWRNEQFWV 386
Query: 280 IGGVSSHLFAVFQGLLXVIAGVDTSXTXTSK 372
IGGVS+HLFAVFQGLL V+ GVDT+ T TSK
Sbjct: 387 IGGVSAHLFAVFQGLLKVLGGVDTNFTVTSK 479
Database: Populus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:49 PM
Number of letters in database: 203,408,664
Number of sequences in database: 369,679
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 201,067,594
Number of Sequences: 369679
Number of extensions: 2654674
Number of successful extensions: 83877
Number of sequences better than 1.0e-020: 105
length of database: 67,802,888
effective HSP length: 50
effective length of database: 49,318,938
effective search space used: 4488023358
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)