TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= L46398.2.1
(1263 letters)
Database: Populus_nucl_with_EST.fasta
369,679 sequences; 203,408,664 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|DT489131.1|DT489131 WS02538.B21_G02 PT-MB-N-A-15 Populus... 138 3e-063
gb|DT511195.1|DT511195 WS02429.BR_M24 PTxD-ICC-N-A-14 Popul... 127 2e-061
gb|AF185574.2| Populus tremuloides transcription factor MAG... 129 5e-060
gb|AY235222.1| Populus tremuloides SEP3-related MADS-box pr... 126 1e-059
gb|BU876142.1|BU876142 V016F11 Populus flower cDNA library ... 129 1e-058
gb|BU869391.1|BU869391 M129E09 Populus flower cDNA library ... 129 3e-058
gb|BU883349.1|BU883349 UM89TD10 Populus flower cDNA library... 129 4e-058
gb|DN500995.1|DN500995 UM45TD08.5pR Populus female catkins ... 126 1e-057
gb|CX660345.1|CX660345 PO01025D11 Poplar SC cDNA library Po... 104 6e-054
gb|AF034095.2| Populus tremuloides Apetala 1 protein mRNA, ... 114 6e-053
gb|BU875452.1|BU875452 V007C11 Populus flower cDNA library ... 129 4e-049
gb|BU880392.1|BU880392 UM45TD08 Populus flower cDNA library... 100 5e-049
gb|DV466358.1|DV466358 MTUNUL1.P5.F01 NUL Populus fremontii... 117 1e-048
gb|DV466538.1|DV466538 MTUNUL1.P6.H12 NUL Populus fremontii... 117 1e-048
gb|AY615964.1| Populus balsamifera subsp. trichocarpa APETA... 117 2e-048
gb|DT509633.1|DT509633 WS02424.BR_E10 PTxD-ICC-N-A-14 Popul... 193 2e-048
gb|DT510612.1|DT510612 WS02427.BR_A17 PTxD-ICC-N-A-14 Popul... 193 2e-048
gb|CA924237.1|CA924237 MTU7CL.P3.D05 Aspen leaf cDNA Librar... 193 3e-048
gb|AY615966.1| Populus balsamifera subsp. trichocarpa APETA... 115 2e-047
gb|BU868189.1|BU868189 M112C09 Populus flower cDNA library ... 117 2e-047
gb|AF034094.2| Populus tremuloides PTM2 mRNA, complete cds 114 2e-047
gb|BU872670.1|BU872670 Q045E11 Populus flower cDNA library ... 115 2e-047
gb|AF034093.2| Populus tremuloides PTM1 mRNA, complete cds 117 5e-047
gb|CV245843.1|CV245843 WS0259.B21_I15 PT-MB-N-A-15 Populus ... 186 3e-046
gb|AY615965.1| Populus balsamifera subsp. trichocarpa APETA... 116 1e-045
gb|BU896825.1|BU896825 X046D07 Populus wood cDNA library Po... 181 1e-044
gb|BU896348.1|BU896348 X039D07 Populus wood cDNA library Po... 180 1e-044
gb|DN501305.1|DN501305 UM83TF04.5pR Populus female catkins ... 117 5e-044
gb|CV231279.1|CV231279 WS0194.B21_A22 PT-DX-N-A-10 Populus ... 122 9e-044
gb|CV242362.1|CV242362 WS02514.B21.1_N17 PT-MB-N-A-15 Popul... 122 1e-043
gb|BU882889.1|BU882889 UM83TF04 Populus flower cDNA library... 117 2e-043
gb|AI161962.1|AI161962 A010P29U Hybrid aspen plasmid librar... 177 2e-043
gb|AF377868.1| Populus tremuloides MADS-box protein PTM5 mR... 122 3e-043
gb|CA925124.1|CA925124 MTU7TL.P13.H01 Aspen leaf cDNA Libra... 122 3e-043
gb|DT524337.1|DT524337 WS02042.C21.1_F18 PTxN-IB-N-A-11 Pop... 121 6e-043
gb|CA924456.1|CA924456 MTU7CL.P5.H08 Aspen leaf cDNA Librar... 120 1e-042
gb|BU892010.1|BU892010 P058B10 Populus petioles cDNA librar... 118 1e-041
gb|DN484014.1|DN484014 PSO205E04 Populus tomentiglandulosa ... 119 3e-041
gb|BU882965.1|BU882965 UM84TE12 Populus flower cDNA library... 168 6e-041
gb|BU869954.1|BU869954 Q006E04 Populus flower cDNA library ... 117 1e-040
gb|BU897836.1|BU897836 X070E03 Populus wood cDNA library Po... 116 1e-040
gb|DT493519.1|DT493519 WS0111.BR_J17 PT-P-FL-A-2 Populus tr... 112 2e-040
gb|BU875666.1|BU875666 V009G10 Populus flower cDNA library ... 165 7e-040
gb|BU895896.1|BU895896 X032F06 Populus wood cDNA library Po... 111 2e-039
gb|BU891075.1|BU891075 P045E12 Populus petioles cDNA librar... 163 2e-039
gb|DN494603.1|DN494603 M112C09.5pR Populus female catkins c... 117 2e-039
gb|CK096310.1|CK096310 UB10CPE08.3pR Populus active cambium... 107 7e-038
gb|DT510135.1|DT510135 WS02425.BR_L05 PTxD-ICC-N-A-14 Popul... 105 4e-037
gb|DT514757.1|DT514757 WS02425.B21_L05 PTxD-ICC-N-A-14 Popu... 101 8e-037
gb|BU883614.1|BU883614 UM95TA01 Populus flower cDNA library... 154 1e-036
gb|CV262641.1|CV262641 WS0202.B21_B22 PTxN-IB-N-A-11 Populu... 97 2e-036
gb|BI139220.1|BI139220 F126P60Y Populus flower cDNA library... 88 2e-036
gb|DT517651.1|DT517651 WS02434.B21_O16 PTxD-ICC-N-A-14 Popu... 152 4e-036
gb|CX186726.1|CX186726 A02_45-82_02.ab1 leaf inoculated wit... 95 1e-035
gb|BU876515.1|BU876515 V021F11 Populus flower cDNA library ... 122 9e-035
gb|DT521357.1|DT521357 WS02034.B21_B05 PTxN-IB-N-A-11 Popul... 99 3e-034
gb|CV245718.1|CV245718 WS0259.B21_D02 PT-MB-N-A-15 Populus ... 124 4e-034
gb|BU871261.1|BU871261 Q028F06 Populus flower cDNA library ... 140 8e-034
gb|DT472398.1|DT472398 WS01226.BR.1_F17 PT-GT-FL-A-3 Populu... 122 2e-033
gb|CV237019.1|CV237019 WS01226.B21.1_F17 PT-GT-FL-A-3 Popul... 89 2e-033
gb|DN491294.1|DN491294 UM83TF04.3pR Populus female catkins ... 82 2e-033
gb|DT499735.1|DT499735 WS9991.BR_D06 PT-P-FL-A-2 Populus tr... 117 2e-033
gb|CF936743.1|CF936743 PO3009G02 Populus tomentiglandulosa ... 105 2e-032
gb|BI123112.1|BI123112 I017P76P Populus leaf cDNA library P... 90 3e-032
gb|CV242967.1|CV242967 WS02516.B21.1_I15 PT-MB-N-A-15 Popul... 104 4e-032
gb|DT488786.1|DT488786 WS02537.B21_G19 PT-MB-N-A-15 Populus... 102 2e-031
gb|BU894040.1|BU894040 X001D02 Populus wood cDNA library Po... 85 4e-031
gb|DT520688.1|DT520688 WS02448.B21_E04 PTxD-ICC-N-A-14 Popu... 133 3e-030
gb|AF052570.1|AF052570 Populus balsamifera subsp. trichocar... 114 3e-030
gb|BU878009.1|BU878009 V042A05 Populus flower cDNA library ... 132 6e-030
gb|AF052571.1|AF052571 Populus balsamifera subsp. trichocar... 116 1e-029
gb|CV245476.1|CV245476 WS0257.B21_I10 PT-MB-N-A-15 Populus ... 95 2e-029
gb|DT520698.1|DT520698 WS02448.B21_E14 PTxD-ICC-N-A-14 Popu... 102 3e-029
gb|CK098276.1|CK098276 A010P29.5pR Hybrid aspen plasmid lib... 129 4e-029
gb|CV247277.1|CV247277 WS01117.B21_K02 PT-P-FL-A-2 Populus ... 96 5e-029
gb|DT494170.1|DT494170 WS01117.BR_K02 PT-P-FL-A-2 Populus t... 96 5e-029
gb|CF229485.1|CF229485 PtaXM0026A5A0501 Poplar cDNA library... 83 7e-029
gb|CX169762.1|CX169762 F05_69-66_11.ab1 leaf inoculated wit... 104 7e-029
gb|BU879372.1|BU879372 V059D02 Populus flower cDNA library ... 100 3e-027
gb|BU879741.1|BU879741 V063H01 Populus flower cDNA library ... 100 3e-027
gb|BU828831.1|BU828831 K029P51P Populus apical shoot cDNA l... 122 3e-027
gb|DT520386.1|DT520386 WS02447.B21_G16 PTxD-ICC-N-A-14 Popu... 122 6e-027
gb|CV277102.1|CV277102 WS0142.B21_K13 PTxD-IL-A-5 Populus t... 89 7e-027
gb|CV256507.1|CV256507 WS0244.B21_A19 PTxD-ICC-N-A-14 Popul... 120 2e-026
gb|DT524867.1|DT524867 WS02043.C21_M22 PTxN-IB-N-A-11 Popul... 100 3e-026
gb|CK109990.1|CK109990 N051E04 Populus bark cDNA library Po... 119 3e-026
gb|DT508225.1|DT508225 WS02420.BR_G10 PTxD-ICC-N-A-14 Popul... 104 2e-025
gb|CK106370.1|CK106370 UB18CPG04.5pR Populus active cambium... 99 2e-025
gb|AY359607.1| Populus yunnanensis sex male AGAMOUS (AG2) g... 116 3e-025
gb|AY359609.1| Populus tomentosa sex female AGAMOUS (AG2) g... 116 3e-025
gb|AY359611.1| Populus tomentosa sex male AGAMOUS (AG2) gen... 116 3e-025
gb|AJ768240.1|AJ768240 AJ768240 Populus euphratica leaf adu... 82 4e-025
gb|CK101433.1|CK101433 F057P86.5pR Populus flower cDNA libr... 114 1e-024
gb|AY359612.1| Populus tomentosa sex male AGAMOUS (AG1) gen... 114 1e-024
gb|BI137327.1|BI137327 F084P34Y Populus flower cDNA library... 97 2e-024
gb|AJ780611.1|AJ780611 AJ780611 Populus euphratica leaf 3-6... 113 2e-024
gb|DT515891.1|DT515891 WS02429.B21.1_M24 PTxD-ICC-N-A-14 Po... 102 2e-024
gb|BU875165.1|BU875165 V003A12 Populus flower cDNA library ... 113 3e-024
gb|CV267701.1|CV267701 WS02032.B21_H10 PTxN-IB-N-A-11 Popul... 113 3e-024
gb|AY359608.1| Populus yunnanensis sex male AGAMOUS (AG1) g... 113 3e-024
gb|AY359610.1| Populus tomentosa sex female AGAMOUS (AG1) g... 113 3e-024
gb|CV242364.1|CV242364 WS02514.B21.1_N19 PT-MB-N-A-15 Popul... 112 5e-024
gb|BI138350.1|BI138350 F104P08Y Populus flower cDNA library... 111 7e-024
gb|BU821074.1|BU821074 UB18CPG04 Populus tremula cambium cD... 99 7e-024
gb|BI135750.1|BI135750 F057P86Y Populus flower cDNA library... 111 1e-023
gb|AY515153.1| Populus deltoides APETALA-like protein AP1 m... 111 1e-023
gb|CV270205.1|CV270205 WS0151.B21_G01 PTxN-IB-A-6 Populus t... 74 1e-023
gb|AJ776745.1|AJ776745 AJ776745 Populus euphratica root 3-6... 110 2e-023
gb|BU871887.1|BU871887 Q035F11 Populus flower cDNA library ... 102 3e-023
gb|CV245807.1|CV245807 WS0259.B21_G24 PT-MB-N-A-15 Populus ... 109 3e-023
gb|BU809225.1|BU809225 UL55PC09 Populus leaf cDNA library P... 109 5e-023
gb|DN500477.1|DN500477 UL55PC09.5pR Populus cold stressed l... 109 5e-023
gb|BU876286.1|BU876286 V018G10 Populus flower cDNA library ... 108 7e-023
gb|BU876773.1|BU876773 V025B06 Populus flower cDNA library ... 108 9e-023
gb|CK106139.1|CK106139 UB10CPE08.5pR Populus active cambium... 107 2e-022
gb|CV255176.1|CV255176 WS02412.B21_E13 PTxD-ICC-N-A-14 Popu... 106 2e-022
gb|CX168497.1|CX168497 E12_69-75_10.ab1 leaf inoculated wit... 106 2e-022
gb|CX172311.1|CX172311 A03_69-28_01.ab1 leaf inoculated wit... 106 2e-022
gb|DT487816.1|DT487816 WS02534.B21_L20 PT-MB-N-A-15 Populus... 86 4e-022
gb|CX170459.1|CX170459 F04_69-82_12.ab1 leaf inoculated wit... 92 4e-022
gb|CK090795.1|CK090795 F025P39.3pR Populus flower cDNA libr... 101 6e-022
gb|DV463676.1|DV463676 MTUNUL1.P19.A07 NUL Populus fremonti... 100 6e-022
gb|CF937087.1|CF937087 PO3015A10 Populus tomentiglandulosa ... 105 8e-022
gb|CX171462.1|CX171462 A11_69-81_01.ab1 leaf inoculated wit... 105 8e-022
gb|CX654436.1|CX654436 PO02006B02 Poplar SC cDNA library Po... 105 8e-022
gb|BU835875.1|BU835875 T079G04 Populus apical shoot cDNA li... 104 1e-021
gb|BU887610.1|BU887610 R064B01 Populus root cDNA library Po... 104 1e-021
gb|CB240437.1|CB240437 PopSC00421 Poplar SC cDNA library Po... 104 1e-021
gb|CN519626.1|CN519626 GQ0104.B3_J10 GQ010 Populus trichoca... 103 2e-021
gb|CX176973.1|CX176973 F04_69-92_12.ab1 leaf inoculated wit... 103 2e-021
gb|CV131878.1|CV131878 L4P01g05 Populus stem seasonal libra... 92 4e-021
gb|AI164140.1|AI164140 A055P40U Hybrid aspen plasmid librar... 102 6e-021
gb|CX175553.1|CX175553 G09_69-34_13.ab1 leaf inoculated wit... 102 6e-021
>gb|DT489131.1|DT489131 WS02538.B21_G02 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02538_G02 3', mRNA sequence
Length = 853
Score = 138 bits (296), Expect(2) = 3e-063
Identities = 56/77 (72%), Positives = 66/77 (85%)
Frame = +1 / -2
Query: 211 GRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSGRGKLYEFGSAGVT 390
G+V L+RIENKI+RQVTFSKRRNGLLKKAYELS+LCDAEVALIIFS GKL+EF S +
Sbjct: 852 GKVVLERIENKISRQVTFSKRRNGLLKKAYELSLLCDAEVALIIFSSHGKLFEFSSIDMN 673
Query: 391 KTLERYQHCCYNAQDSN 441
L+RY+ CCY+ QD+N
Sbjct: 672 SILQRYRQCCYSTQDTN 622
Score = 124 bits (266), Expect(2) = 3e-063
Identities = 56/100 (56%), Positives = 73/100 (73%)
Frame = +1 / -2
Query: 418 CYNAQDSNNSALSESQSWYQEMSKLRAKFEALQRTQRHLLGEDLGPLSVKELQQLEKQLE 597
C + N S + YQE+S+LRAK E LQR+QR+ LGEDL PL+ KEL+++EKQL+
Sbjct: 648 CCYSTQDTNIPEEGSHNLYQEVSRLRAKCETLQRSQRNFLGEDLEPLAFKELEKIEKQLD 469
Query: 598 CALSQARQRKTQVMMEQVEELRRTERHLGEMNRQLKHKLE 717
LSQARQRKTQ+M +++EELR E+ L E N+QLK KLE
Sbjct: 468 KTLSQARQRKTQLMFDKMEELRLKEQELEEENKQLKTKLE 349
Score = 76.2 bits (160), Expect(2) = 5e-024
Identities = 36/88 (40%), Positives = 46/88 (52%)
Frame = -2 / +2
Query: 722 SASSLCLSCLFXXXXXXXXXXXXXXXXXITCVFLCLACDKAHXXXXXXXXXXFTLSGPRS 543
++SSL LSCLF I+CVFLCLAC++ SG RS
Sbjct: 344 TSSSLVLSCLFSSSSSCSFRRNSSILSNISCVFLCLACERVLSSCFSIFSNSLNASGSRS 523
Query: 542 SPSKCL*VRCKASNFALSFDISWYQL*D 459
SP K L* R + S+FAL+ + SWY+L D
Sbjct: 524 SPRKFL*ER*RVSHFALNLETSWYKLCD 607
Score = 55.6 bits (115), Expect(2) = 5e-024
Identities = 32/70 (45%), Positives = 37/70 (52%)
Frame = -2 / +2
Query: 419 QQC*YLSKVLVTPALPNS*SLPRPEKMMXXXXXXXXXXXXXAFLSRPLRRLEKVTWRLIL 240
Q C Y ++L L NS SLP EKM+ AFLS+P LEKVT RLIL
Sbjct: 644 QHCRYR*RILFISMLLNSKSLPWLEKMIRATSASQRSESS*AFLSKPFLLLEKVT*RLIL 823
Query: 239 FSIRFSSTRP 210
FSI +T P
Sbjct: 824 FSILSKTTFP 853
>gb|DT511195.1|DT511195 WS02429.BR_M24 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02429_M24 5', mRNA sequence
Length = 696
Score = 127 bits (271), Expect(4) = 2e-061
Identities = 55/60 (91%), Positives = 57/60 (95%)
Frame = +1 / +3
Query: 202 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSGRGKLYEFGSA 381
MGRGRVELKRIENKINR VTF+KRRNGLLKKAYELSVLCDAEVALIIFS RGKLYEF S+
Sbjct: 39 MGRGRVELKRIENKINRXVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 218
Score = 102 bits (218), Expect(4) = 2e-061
Identities = 43/80 (53%), Positives = 60/80 (75%)
Frame = +1 / +3
Query: 475 QEMSKLRAKFEALQRTQRHLLGEDLGPLSVKELQQLEKQLECALSQARQRKTQVMMEQVE 654
QE KL+A++EALQRTQR+LLGE+LGPLS KEL+ LE+QL+ +L Q R +TQ M++Q+
Sbjct: 318 QEYLKLKARYEALQRTQRNLLGEELGPLSSKELESLERQLDMSLKQIRSTRTQYMLDQLH 497
Query: 655 ELRRTERHLGEMNRQLKHKL 714
+L+ E L N+ LK +L
Sbjct: 498 DLQHKEHMLTAANKSLKERL 557
Score = 34.1 bits (68), Expect(4) = 2e-061
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = +1 / +3
Query: 376 SAGVTKTLERYQHCCYNAQDSNNSA 450
S+ + KTLERYQ C Y A + N SA
Sbjct: 216 SSSMLKTLERYQKCNYGAPEPNVSA 290
Score = 30.4 bits (60), Expect(4) = 2e-061
Identities = 10/12 (83%), Positives = 12/12 (100%)
Frame = +1 / +3
Query: 838 AMDCEPTLQIGY 873
A++CEPTLQIGY
Sbjct: 660 ALECEPTLQIGY 695
>gb|AF185574.2| Populus tremuloides transcription factor MAGL4 mRNA, complete cds
Length = 1195
Score = 129 bits (276), Expect(3) = 5e-060
Identities = 56/59 (94%), Positives = 57/59 (96%)
Frame = +1 / +1
Query: 202 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSGRGKLYEFGS 378
MGRGRVELKRIENKINRQVTF+KRRNGLLKKAYELSVLCDAEVALIIFS RGKLYEF S
Sbjct: 232 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCS 408
Score = 113 bits (242), Expect(3) = 5e-060
Identities = 50/106 (47%), Positives = 70/106 (66%)
Frame = +1 / +1
Query: 418 CYNAQDSNNSALSESQSWYQEMSKLRAKFEALQRTQRHLLGEDLGPLSVKELQQLEKQLE 597
C + N E ++ Y+E K++A+FE LQRTQR+LLGEDLGPL+ K+L+QLE+QLE
Sbjct: 448 CSYGAEEVNKPAKELENSYREYLKVKARFEGLQRTQRNLLGEDLGPLNTKDLEQLERQLE 627
Query: 598 CALSQARQRKTQVMMEQVEELRRTERHLGEMNRQLKHKLEAEGCSN 735
+L+Q R KTQ M++Q+ +L+ E L E NR L KL+ N
Sbjct: 628 SSLNQVRSTKTQYMLDQLADLQNKEHLLQEANRGLTIKLDEISARN 765
Score = 28.1 bits (55), Expect(3) = 5e-060
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = +1 / +1
Query: 838 AMDCEPTLQIGY 873
A++C PTLQIGY
Sbjct: 850 ALECNPTLQIGY 885
>gb|AY235222.1| Populus tremuloides SEP3-related MADS-box protein (M6) mRNA,
complete cds
Length = 1098
Score = 126 bits (269), Expect(4) = 1e-059
Identities = 54/59 (91%), Positives = 57/59 (96%)
Frame = +1 / +2
Query: 202 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSGRGKLYEFGS 378
MGRGRV+LKRIENKINRQVTF+KRRNGLLKKAYELSVLC+AEVALIIFS RGKLYEF S
Sbjct: 8 MGRGRVQLKRIENKINRQVTFAKRRNGLLKKAYELSVLCEAEVALIIFSNRGKLYEFCS 184
Score = 99.6 bits (211), Expect(4) = 1e-059
Identities = 41/80 (51%), Positives = 59/80 (73%)
Frame = +1 / +2
Query: 475 QEMSKLRAKFEALQRTQRHLLGEDLGPLSVKELQQLEKQLECALSQARQRKTQVMMEQVE 654
QE KL+A++E LQRTQR+LLGE+LGPLS K+L+ LE+QL+ +L Q R +TQ M++Q+
Sbjct: 287 QEYLKLKARYEGLQRTQRNLLGEELGPLSSKDLESLERQLDMSLKQIRSTRTQYMLDQLN 466
Query: 655 ELRRTERHLGEMNRQLKHKL 714
+L+ E L N+ LK +L
Sbjct: 467 DLQHKEHMLTAANKSLKERL 526
Score = 32.2 bits (64), Expect(4) = 1e-059
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +1 / +2
Query: 379 AGVTKTLERYQHCCYNAQDSNNSA 450
+ + KTLERYQ C Y A + N SA
Sbjct: 188 SSMLKTLERYQKCNYGAPEPNVSA 259
Score = 30.4 bits (60), Expect(4) = 1e-059
Identities = 10/12 (83%), Positives = 12/12 (100%)
Frame = +1 / +2
Query: 838 AMDCEPTLQIGY 873
A++CEPTLQIGY
Sbjct: 629 ALECEPTLQIGY 664
>gb|BU876142.1|BU876142 V016F11 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 704
Score = 129 bits (276), Expect(3) = 1e-058
Identities = 55/60 (91%), Positives = 58/60 (96%)
Frame = +1 / +2
Query: 202 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSGRGKLYEFGSA 381
MGRGRVELKRIENKINRQVTF+KRRNGLLKKAYELSVLCDAE+ALIIFS RGKLYEF S+
Sbjct: 95 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEIALIIFSNRGKLYEFCSS 274
Score = 103 bits (219), Expect(3) = 1e-058
Identities = 43/80 (53%), Positives = 60/80 (75%)
Frame = +1 / +2
Query: 475 QEMSKLRAKFEALQRTQRHLLGEDLGPLSVKELQQLEKQLECALSQARQRKTQVMMEQVE 654
QE KL+A++EALQRTQR+LLGEDLGPLS KEL+ LE+QL+ +L Q R +TQ M++Q+
Sbjct: 374 QEYLKLKARYEALQRTQRNLLGEDLGPLSSKELESLERQLDMSLKQIRSTRTQYMLDQLN 553
Query: 655 ELRRTERHLGEMNRQLKHKL 714
+L+ E L N+ L+ +L
Sbjct: 554 DLQHKEHMLTAANKSLRERL 613
Score = 34.1 bits (68), Expect(3) = 1e-058
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = +1 / +2
Query: 376 SAGVTKTLERYQHCCYNAQDSNNSA 450
S+ + KTLERYQ C Y A + N SA
Sbjct: 272 SSSMLKTLERYQKCNYGAPEPNVSA 346
>gb|BU869391.1|BU869391 M129E09 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 665
Score = 129 bits (276), Expect(2) = 3e-058
Identities = 56/59 (94%), Positives = 57/59 (96%)
Frame = +1 / +1
Query: 202 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSGRGKLYEFGS 378
MGRGRVELKRIENKINRQVTF+KRRNGLLKKAYELSVLCDAEVALIIFS RGKLYEF S
Sbjct: 34 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCS 210
Score = 117 bits (250), Expect(2) = 3e-058
Identities = 53/106 (50%), Positives = 71/106 (66%)
Frame = +1 / +1
Query: 418 CYNAQDSNNSALSESQSWYQEMSKLRAKFEALQRTQRHLLGEDLGPLSVKELQQLEKQLE 597
C + N E +S Y+E K++A+FEALQRTQR+LLGEDLGPL+ KEL+QLE+QLE
Sbjct: 250 CSYGAEEVNKPAKELESSYREYLKVKARFEALQRTQRNLLGEDLGPLNTKELEQLERQLE 429
Query: 598 CALSQARQRKTQVMMEQVEELRRTERHLGEMNRQLKHKLEAEGCSN 735
+L+Q R KTQ M++Q+ +L+ E L E NR L KL+ N
Sbjct: 430 SSLNQVRSTKTQYMLDQLADLQNKEHLLLEANRGLTIKLDEISARN 567
>gb|BU883349.1|BU883349 UM89TD10 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 558
Score = 129 bits (276), Expect(2) = 4e-058
Identities = 56/59 (94%), Positives = 57/59 (96%)
Frame = +1 / +1
Query: 202 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSGRGKLYEFGS 378
MGRGRVELKRIENKINRQVTF+KRRNGLLKKAYELSVLCDAEVALIIFS RGKLYEF S
Sbjct: 37 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCS 213
Score = 116 bits (249), Expect(2) = 4e-058
Identities = 52/100 (52%), Positives = 70/100 (70%)
Frame = +1 / +1
Query: 418 CYNAQDSNNSALSESQSWYQEMSKLRAKFEALQRTQRHLLGEDLGPLSVKELQQLEKQLE 597
C + N E +S Y+E K++A+FEALQRTQR+LLGEDLGPL+ KEL+QLE+QLE
Sbjct: 253 CSYGAEEVNKPAKELESSYREYLKVKARFEALQRTQRNLLGEDLGPLNTKELEQLERQLE 432
Query: 598 CALSQARQRKTQVMMEQVEELRRTERHLGEMNRQLKHKLE 717
+L+Q R KTQ M++Q+ +L+ E L E NR L KL+
Sbjct: 433 SSLNQVRSTKTQYMLDQLADLQNKEHLLLEANRGLTIKLD 552
>gb|DN500995.1|DN500995 UM45TD08.5pR Populus female catkins cDNA library Populus
trichocarpa cDNA clone UM45TD08 5', mRNA sequence
Length = 682
Score = 126 bits (269), Expect(3) = 1e-057
Identities = 55/60 (91%), Positives = 57/60 (95%)
Frame = +1 / +3
Query: 202 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSGRGKLYEFGSA 381
MGRGRVELKRIENKINRQVTF+KRRNGLLKKAYELSVLC AEVALIIFS RGKLYEF S+
Sbjct: 54 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCAAEVALIIFSNRGKLYEFCSS 233
Score = 102 bits (218), Expect(3) = 1e-057
Identities = 43/80 (53%), Positives = 60/80 (75%)
Frame = +1 / +3
Query: 475 QEMSKLRAKFEALQRTQRHLLGEDLGPLSVKELQQLEKQLECALSQARQRKTQVMMEQVE 654
QE KL+A++EALQRTQR+LLGE+LGPLS KEL+ LE+QL+ +L Q R +TQ M++Q+
Sbjct: 333 QEYLKLKARYEALQRTQRNLLGEELGPLSSKELESLERQLDMSLKQIRSTRTQYMLDQLN 512
Query: 655 ELRRTERHLGEMNRQLKHKL 714
+L+ E L N+ LK +L
Sbjct: 513 DLQHKEHMLTAANKSLKERL 572
Score = 34.1 bits (68), Expect(3) = 1e-057
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = +1 / +3
Query: 376 SAGVTKTLERYQHCCYNAQDSNNSA 450
S+ + KTLERYQ C Y A + N SA
Sbjct: 231 SSSMLKTLERYQKCNYGAPEPNVSA 305
>gb|CX660345.1|CX660345 PO01025D11 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO01025D11 5', mRNA sequence
Length = 679
Score = 104 bits (222), Expect(4) = 6e-054
Identities = 44/80 (55%), Positives = 60/80 (75%)
Frame = +1 / +3
Query: 475 QEMSKLRAKFEALQRTQRHLLGEDLGPLSVKELQQLEKQLECALSQARQRKTQVMMEQVE 654
QE KL+A++EALQRTQR+LLGEDLGPLS KEL+ LE+QL+ +L Q R +TQ M++Q+
Sbjct: 246 QEYLKLKARYEALQRTQRNLLGEDLGPLSSKELESLERQLDMSLKQIRSTRTQYMLDQLN 425
Query: 655 ELRRTERHLGEMNRQLKHKL 714
+L+ E L N+ LK +L
Sbjct: 426 DLQHKEHMLTAANKSLKERL 485
Score = 102 bits (217), Expect(4) = 6e-054
Identities = 43/48 (89%), Positives = 46/48 (95%)
Frame = +1 / +3
Query: 238 NKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSGRGKLYEFGSA 381
NKINRQVTF+KRRNGLLKKAYELSVLCDAE+ALIIFS RGKLYEF S+
Sbjct: 3 NKINRQVTFAKRRNGLLKKAYELSVLCDAEIALIIFSNRGKLYEFCSS 146
Score = 34.5 bits (69), Expect(4) = 6e-054
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = +1 / +3
Query: 376 SAGVTKTLERYQHCCYNAQDSNNSA 450
S+ + KTLERYQ C Y A + N SA
Sbjct: 144 SSSMLKTLERYQKCNYGAPEPNASA 218
Score = 27.2 bits (53), Expect(4) = 6e-054
Identities = 8/11 (72%), Positives = 11/11 (100%)
Frame = +1 / +1
Query: 841 MDCEPTLQIGY 873
++CEPTLQ+GY
Sbjct: 592 LECEPTLQMGY 624
>gb|AF034095.2| Populus tremuloides Apetala 1 protein mRNA, partial cds
Length = 943
Score = 114 bits (244), Expect(3) = 6e-053
Identities = 51/106 (48%), Positives = 71/106 (66%)
Frame = +1 / +1
Query: 418 CYNAQDSNNSALSESQSWYQEMSKLRAKFEALQRTQRHLLGEDLGPLSVKELQQLEKQLE 597
C + N E ++ Y+E K++A+FEALQRTQR+LLGEDLGPL+ K+L+QLE+QLE
Sbjct: 193 CSYGAEEVNKPAKELENSYREYLKVKARFEALQRTQRNLLGEDLGPLNTKDLEQLERQLE 372
Query: 598 CALSQARQRKTQVMMEQVEELRRTERHLGEMNRQLKHKLEAEGCSN 735
+L+Q R KTQ M++Q+ +L+ E L E NR L KL+ N
Sbjct: 373 SSLNQVRSTKTQYMLDQLADLQNKEHLLLEANRGLTIKLDEISARN 510
Score = 104 bits (222), Expect(3) = 6e-053
Identities = 45/48 (93%), Positives = 46/48 (95%)
Frame = +1 / +1
Query: 235 ENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSGRGKLYEFGS 378
ENKINRQVTF+KRRNGLLKKAYELSVLCDAEVALIIFS RGKLYEF S
Sbjct: 10 ENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCS 153
Score = 28.1 bits (55), Expect(3) = 6e-053
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = +1 / +1
Query: 838 AMDCEPTLQIGY 873
A++C PTLQIGY
Sbjct: 595 ALECNPTLQIGY 630
>gb|BU875452.1|BU875452 V007C11 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 697
Score = 129 bits (276), Expect(2) = 4e-049
Identities = 56/59 (94%), Positives = 57/59 (96%)
Frame = +1 / +2
Query: 202 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSGRGKLYEFGS 378
MGRGRVELKRIENKINRQVTF+KRRNGLLKKAYELSVLCDAEVALIIFS RGKLYEF S
Sbjct: 278 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCS 454
Score = 86.8 bits (183), Expect(2) = 4e-049
Identities = 37/67 (55%), Positives = 49/67 (73%)
Frame = +1 / +2
Query: 418 CYNAQDSNNSALSESQSWYQEMSKLRAKFEALQRTQRHLLGEDLGPLSVKELQQLEKQLE 597
C + N E +S Y+E K++A+FEALQRTQR+LLG DLGPL+ KEL+QLE+QLE
Sbjct: 494 CSYGAEEVNKPAKELESSYREYLKVKARFEALQRTQRNLLGGDLGPLNTKELEQLERQLE 673
Query: 598 CALSQAR 618
+L+Q R
Sbjct: 674 SSLNQVR 694
>gb|BU880392.1|BU880392 UM45TD08 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 474
Score = 100 bits (212), Expect(3) = 5e-049
Identities = 42/77 (54%), Positives = 58/77 (75%)
Frame = +1 / +3
Query: 475 QEMSKLRAKFEALQRTQRHLLGEDLGPLSVKELQQLEKQLECALSQARQRKTQVMMEQVE 654
QE KL+A++EALQRTQR+LLGE+LGPLS KEL+ LE+QL+ +L Q R +TQ M++Q+
Sbjct: 243 QEYLKLKARYEALQRTQRNLLGEELGPLSSKELESLERQLDMSLKQIRSTRTQYMLDQLN 422
Query: 655 ELRRTERHLGEMNRQLK 705
+L+ E L N+ LK
Sbjct: 423 DLQHKEHMLTAANKSLK 473
Score = 100 bits (212), Expect(3) = 5e-049
Identities = 43/47 (91%), Positives = 45/47 (95%)
Frame = +1 / +3
Query: 241 KINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSGRGKLYEFGSA 381
KINRQVTF+KRRNGLLKKAYELSVLCDAEVALIIFS RGKLYEF S+
Sbjct: 3 KINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 143
Score = 34.1 bits (68), Expect(3) = 5e-049
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = +1 / +3
Query: 376 SAGVTKTLERYQHCCYNAQDSNNSA 450
S+ + KTLERYQ C Y A + N SA
Sbjct: 141 SSSMLKTLERYQKCNYGAPEPNVSA 215
>gb|DV466358.1|DV466358 MTUNUL1.P5.F01 NUL Populus fremontii x Populus angustifolia cDNA,
mRNA sequence
Length = 723
Score = 117 bits (250), Expect(2) = 1e-048
Identities = 47/59 (79%), Positives = 57/59 (96%)
Frame = +1 / +2
Query: 202 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSGRGKLYEFGS 378
MGRGR++LKRIENKINRQVTFSKRR+GLLKKA+E+SVLCDAEVALI+FS +GKL+E+ +
Sbjct: 158 MGRGRIQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYAT 334
Score = 97.3 bits (206), Expect(2) = 1e-048
Identities = 39/84 (46%), Positives = 56/84 (66%)
Frame = +1 / +2
Query: 466 SWYQEMSKLRAKFEALQRTQRHLLGEDLGPLSVKELQQLEKQLECALSQARQRKTQVMME 645
SW E +KL+A+ + LQR QRH +GEDL L++KELQ LE Q++ AL R RK Q+M E
Sbjct: 428 SWTLEYAKLKARVDVLQRNQRHFMGEDLDSLNIKELQNLEHQIDSALKHVRSRKNQLMYE 607
Query: 646 QVEELRRTERHLGEMNRQLKHKLE 717
+ EL++ ++ L E N L K++
Sbjct: 608 SISELQKKDKALQEQNNMLAKKVK 679
>gb|DV466538.1|DV466538 MTUNUL1.P6.H12 NUL Populus fremontii x Populus angustifolia cDNA,
mRNA sequence
Length = 684
Score = 117 bits (250), Expect(2) = 1e-048
Identities = 47/59 (79%), Positives = 57/59 (96%)
Frame = +1 / +2
Query: 202 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSGRGKLYEFGS 378
MGRGR++LKRIENKINRQVTFSKRR+GLLKKA+E+SVLCDAEVALI+FS +GKL+E+ +
Sbjct: 155 MGRGRIQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYAT 331
Score = 97.3 bits (206), Expect(2) = 1e-048
Identities = 39/84 (46%), Positives = 56/84 (66%)
Frame = +1 / +2
Query: 466 SWYQEMSKLRAKFEALQRTQRHLLGEDLGPLSVKELQQLEKQLECALSQARQRKTQVMME 645
SW E +KL+A+ + LQR QRH +GEDL L++KELQ LE Q++ AL R RK Q+M E
Sbjct: 425 SWTLEYAKLKARVDVLQRNQRHFMGEDLDSLNIKELQNLEHQIDSALKHVRSRKNQLMYE 604
Query: 646 QVEELRRTERHLGEMNRQLKHKLE 717
+ EL++ ++ L E N L K++
Sbjct: 605 SISELQKKDKALQEQNNMLAKKVK 676
>gb|AY615964.1| Populus balsamifera subsp. trichocarpa APETALA1-like MADS-box
PTAP1-1 mRNA, complete cds
Length = 942
Score = 117 bits (250), Expect(2) = 2e-048
Identities = 48/59 (81%), Positives = 56/59 (94%)
Frame = +1 / +1
Query: 202 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSGRGKLYEFGS 378
MGRGRV+LKRIENKINRQVTFSKRR GLLKKA+E+SVLCDAEVALI+FS +GKL+E+ +
Sbjct: 25 MGRGRVQLKRIENKINRQVTFSKRRTGLLKKAHEISVLCDAEVALIVFSHKGKLFEYST 201
Score = 96.4 bits (204), Expect(2) = 2e-048
Identities = 43/114 (37%), Positives = 68/114 (59%)
Frame = +1 / +1
Query: 376 SAGVTKTLERYQHCCYNAQDSNNSALSESQSWYQEMSKLRAKFEALQRTQRHLLGEDLGP 555
+A + K LER++ Y + + L +W E ++L+AK E LQR RH LGEDL
Sbjct: 202 NACMEKILERHERYSYAERQLVATDLDSQGNWTLEYNRLKAKVELLQRNHRHYLGEDLDS 381
Query: 556 LSVKELQQLEKQLECALSQARQRKTQVMMEQVEELRRTERHLGEMNRQLKHKLE 717
+S+KELQ LE+Q++ AL R+RK +M + + EL+ E+ + E N L +++
Sbjct: 382 VSLKELQNLEQQIDTALKLIRERKNHLMYQSISELQIKEKAIKEQNNMLVKQIK 543
>gb|DT509633.1|DT509633 WS02424.BR_E10 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02424_E10 5', mRNA sequence
Length = 905
Score = 193 bits (416), Expect = 2e-048
Identities = 79/171 (46%), Positives = 123/171 (71%)
Frame = +1 / +2
Query: 202 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSGRGKLYEFGSA 381
MGRG++E+KRIEN NRQVTF KRRNGLLKKAYELSVLCDAEV+LI+FS RG+LYE+ +
Sbjct: 65 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVSLIVFSSRGRLYEYANN 244
Query: 382 GVTKTLERYQHCCYNAQDSNNSALSESQSWYQEMSKLRAKFEALQRTQRHLLGEDLGPLS 561
+ T++RY+ ++ ++ + +Q + QE +K+R + + LQ + RHL+GE + LS
Sbjct: 245 NIRSTIDRYKKVSSDSSNTASITEINAQYYQQESAKMRQQIQLLQNSNRHLMGEAVSNLS 424
Query: 562 VKELQQLEKQLECALSQARQRKTQVMMEQVEELRRTERHLGEMNRQLKHKL 714
VKEL+QLE +LE +++ R +K ++++ ++E +++ E L + L+ K+
Sbjct: 425 VKELKQLENRLERGMTRIRSKKHELLLAEIEYMQKREIELENESAYLRTKI 577
>gb|DT510612.1|DT510612 WS02427.BR_A17 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02427_A17 5', mRNA sequence
Length = 920
Score = 193 bits (416), Expect = 2e-048
Identities = 79/171 (46%), Positives = 123/171 (71%)
Frame = +1 / +3
Query: 202 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSGRGKLYEFGSA 381
MGRG++E+KRIEN NRQVTF KRRNGLLKKAYELSVLCDAEV+LI+FS RG+LYE+ +
Sbjct: 69 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVSLIVFSSRGRLYEYANN 248
Query: 382 GVTKTLERYQHCCYNAQDSNNSALSESQSWYQEMSKLRAKFEALQRTQRHLLGEDLGPLS 561
+ T++RY+ ++ ++ + +Q + QE +K+R + + LQ + RHL+GE + LS
Sbjct: 249 NIRSTIDRYKKVSSDSSNTASITEINAQYYQQESAKMRQQIQLLQNSNRHLMGEAVSNLS 428
Query: 562 VKELQQLEKQLECALSQARQRKTQVMMEQVEELRRTERHLGEMNRQLKHKL 714
VKEL+QLE +LE +++ R +K ++++ ++E +++ E L + L+ K+
Sbjct: 429 VKELKQLENRLERGMTRIRSKKHELLLAEIEYMQKREIELENESAYLRTKI 581
>gb|CA924237.1|CA924237 MTU7CL.P3.D05 Aspen leaf cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 623
Score = 193 bits (415), Expect = 3e-048
Identities = 85/170 (50%), Positives = 120/170 (70%)
Frame = +1 / -3
Query: 202 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSGRGKLYEFGSA 381
M RG+ +++RIEN +RQVTFSKRRNGLLKKA+ELSVLCDAEVA+I+FS RGKLYEFGS+
Sbjct: 516 MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVAVIVFSPRGKLYEFGSS 337
Query: 382 GVTKTLERYQHCCYNAQDSNNSALSESQSWYQEMSKLRAKFEALQRTQRHLLGEDLGPLS 561
V +T+ERYQ + ++ + E + + K E L+ ++R LLGE LG +
Sbjct: 336 SVQETIERYQRHVKEGNTNKQTSEQNVEQLKGEAASMIKKIEILEVSKRKLLGECLGSCT 157
Query: 562 VKELQQLEKQLECALSQARQRKTQVMMEQVEELRRTERHLGEMNRQLKHK 711
++ELQQ+E+QLE ++S R RK QV +Q+E+L++ E+ L N +L +K
Sbjct: 156 IEELQQIEQQLERSVSTIRARKNQVFRDQIEQLKQKEKLLTAENARLSNK 7
>gb|AY615966.1| Populus balsamifera subsp. trichocarpa APETALA1-like MADS-box
PTAP1-2 mRNA, complete cds
Length = 1146
Score = 115 bits (246), Expect(2) = 2e-047
Identities = 48/59 (81%), Positives = 55/59 (93%)
Frame = +1 / +2
Query: 202 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSGRGKLYEFGS 378
MGRGRV+LKRIENKINRQVTFSKRR GLLKKA E+SVLCDAEVALI+FS +GKL+E+ +
Sbjct: 164 MGRGRVQLKRIENKINRQVTFSKRRTGLLKKANEISVLCDAEVALIVFSHKGKLFEYST 340
Score = 95.0 bits (201), Expect(2) = 2e-047
Identities = 42/109 (38%), Positives = 64/109 (58%)
Frame = +1 / +2
Query: 391 KTLERYQHCCYNAQDSNNSALSESQSWYQEMSKLRAKFEALQRTQRHLLGEDLGPLSVKE 570
K LERY+ Y + + L +W E ++L+AK E LQR R+ LGEDL +S+KE
Sbjct: 356 KILERYERYSYAERQLVATDLDSQGNWTLEYNRLKAKVELLQRNHRNYLGEDLDSMSLKE 535
Query: 571 LQQLEKQLECALSQARQRKTQVMMEQVEELRRTERHLGEMNRQLKHKLE 717
LQ LE+Q++ AL R RK +M + + EL+R E+ + N L +++
Sbjct: 536 LQNLEQQIDTALKHIRARKNHLMSQSISELQRKEKAIQVQNNMLVKQIK 682
>gb|BU868189.1|BU868189 M112C09 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 615
Score = 117 bits (250), Expect(2) = 2e-047
Identities = 47/59 (79%), Positives = 57/59 (96%)
Frame = +1 / +3
Query: 202 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSGRGKLYEFGS 378
MGRGR++LKRIENKINRQVTFSKRR+GLLKKA+E+SVLCDAEVALI+FS +GKL+E+ +
Sbjct: 114 MGRGRIQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYAT 290
Score = 93.2 bits (197), Expect(2) = 2e-047
Identities = 37/76 (48%), Positives = 52/76 (68%)
Frame = +1 / +3
Query: 466 SWYQEMSKLRAKFEALQRTQRHLLGEDLGPLSVKELQQLEKQLECALSQARQRKTQVMME 645
SW E +KL+A+ + LQR QRH +GEDL L++KELQ LE Q++ AL R RK Q+M E
Sbjct: 384 SWTLEYAKLKARVDVLQRNQRHFMGEDLDSLNIKELQNLEHQIDSALKHVRSRKNQLMYE 563
Query: 646 QVEELRRTERHLGEMN 693
+ EL++ ++ L E N
Sbjct: 564 SISELQKKDKALQEQN 611
>gb|AF034094.2| Populus tremuloides PTM2 mRNA, complete cds
Length = 969
Score = 114 bits (243), Expect(2) = 2e-047
Identities = 47/59 (79%), Positives = 55/59 (93%)
Frame = +1 / +1
Query: 202 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSGRGKLYEFGS 378
MGRGRV+LKRIENKINRQVTFSKRR GLLKKA+E+SVLCDAEVALI+F +GKL+E+ +
Sbjct: 19 MGRGRVQLKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALIVFCHKGKLFEYST 195
Score = 95.9 bits (203), Expect(2) = 2e-047
Identities = 43/114 (37%), Positives = 67/114 (58%)
Frame = +1 / +1
Query: 376 SAGVTKTLERYQHCCYNAQDSNNSALSESQSWYQEMSKLRAKFEALQRTQRHLLGEDLGP 555
+A + K LER++ Y + + L +W E ++L+ K E LQR RH LGEDL
Sbjct: 196 NACMEKILERHERYSYAERQLVATDLDSQGNWTLEYNRLKEKVELLQRNHRHYLGEDLDS 375
Query: 556 LSVKELQQLEKQLECALSQARQRKTQVMMEQVEELRRTERHLGEMNRQLKHKLE 717
+S+KELQ LEKQ++ AL R+RK +M + + EL+ E+ + E N L +++
Sbjct: 376 VSLKELQNLEKQIDTALELIRERKNHLMYQSISELQIKEKAIKEQNNMLVKQIK 537
>gb|BU872670.1|BU872670 Q045E11 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 734
Score = 115 bits (246), Expect(2) = 2e-047
Identities = 46/59 (77%), Positives = 57/59 (96%)
Frame = +1 / +3
Query: 202 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSGRGKLYEFGS 378
MGRGR++LKRIENKINRQVTFS+RR+GLLKKA+E+SVLCDAEVALI+FS +GKL+E+ +
Sbjct: 147 MGRGRIQLKRIENKINRQVTFSERRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYAT 323
Score = 94.5 bits (200), Expect(2) = 2e-047
Identities = 38/84 (45%), Positives = 55/84 (65%)
Frame = +1 / +3
Query: 466 SWYQEMSKLRAKFEALQRTQRHLLGEDLGPLSVKELQQLEKQLECALSQARQRKTQVMME 645
SW E +KL+A+ + LQR QRH +GEDL ++KELQ LE Q++ AL R RK Q+M E
Sbjct: 417 SWTLEYAKLKARVDVLQRNQRHFMGEDLDSSNIKELQNLEHQIDSALKHVRSRKNQLMYE 596
Query: 646 QVEELRRTERHLGEMNRQLKHKLE 717
+ EL++ ++ L E N L K++
Sbjct: 597 SISELQKKDKALQEQNNMLAKKVK 668
>gb|AF034093.2| Populus tremuloides PTM1 mRNA, complete cds
Length = 994
Score = 117 bits (250), Expect(2) = 5e-047
Identities = 48/59 (81%), Positives = 56/59 (94%)
Frame = +1 / +2
Query: 202 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSGRGKLYEFGS 378
MGRGRV+LKRIENKINRQVTFSKRR GLLKKA+E+SVLCDAEVALI+FS +GKL+E+ +
Sbjct: 20 MGRGRVQLKRIENKINRQVTFSKRRTGLLKKAHEISVLCDAEVALIVFSHKGKLFEYST 196
Score = 91.8 bits (194), Expect(2) = 5e-047
Identities = 40/107 (37%), Positives = 62/107 (57%)
Frame = +1 / +2
Query: 397 LERYQHCCYNAQDSNNSALSESQSWYQEMSKLRAKFEALQRTQRHLLGEDLGPLSVKELQ 576
LERY+ Y + + L W E ++L+AK E LQR R+ +GEDL +S+KELQ
Sbjct: 218 LERYERYSYAERQLVATDLDSQGDWTLEYNRLKAKVELLQRNHRNYVGEDLDSMSLKELQ 397
Query: 577 QLEKQLECALSQARQRKTQVMMEQVEELRRTERHLGEMNRQLKHKLE 717
LE+Q+E AL R RK +M + + E++R E+ + N L +++
Sbjct: 398 NLEQQIETALKHIRARKNHLMSQSISEMQRKEKAIQVQNNMLVKQIK 538
>gb|CV245843.1|CV245843 WS0259.B21_I15 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS0259_I15 3', mRNA sequence
Length = 836
Score = 186 bits (400), Expect = 3e-046
Identities = 84/164 (51%), Positives = 113/164 (68%)
Frame = +1 / -1
Query: 220 ELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSGRGKLYEFGSAGVTKTL 399
++KRIEN +RQVTFSKRRNGLLKKA+ELSVLCDAEVALI+FS RGKLYEF S+ + +T+
Sbjct: 836 QMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSTRGKLYEFSSSSMNRTI 657
Query: 400 ERYQHCCYNAQDSNNSALSESQSWYQEMSKLRAKFEALQRTQRHLLGEDLGPLSVKELQQ 579
E YQ + S+ Q ++ L K E L+ ++R LLG+ L P S+ +LQQ
Sbjct: 656 ESYQKRAKDVGTSSKMVKDNMQPVKEDAFTLAKKIELLEVSKRKLLGDGLEPCSIDDLQQ 477
Query: 580 LEKQLECALSQARQRKTQVMMEQVEELRRTERHLGEMNRQLKHK 711
LE QLE +L++ R RK Q+ EQ+E+L+ E+ L E N +L+ K
Sbjct: 476 LENQLERSLTRIRARKNQLFREQIEKLKGEEKILMEENTELREK 345
>gb|AY615965.1| Populus balsamifera subsp. trichocarpa APETALA1-like MADS-box
PTAP1-1a mRNA, complete cds; alternatively spliced
Length = 1344
Score = 116 bits (247), Expect(2) = 1e-045
Identities = 48/59 (81%), Positives = 55/59 (93%)
Frame = +1 / +2
Query: 202 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSGRGKLYEFGS 378
MGRGRV+LKRIENKINRQVTFSKRR GLLKKA+E+SVLCDAEVALI FS +GKL+E+ +
Sbjct: 386 MGRGRVQLKRIENKINRQVTFSKRRTGLLKKAHEISVLCDAEVALIFFSHKGKLFEYST 562
Score = 88.6 bits (187), Expect(2) = 1e-045
Identities = 39/96 (40%), Positives = 59/96 (61%)
Frame = +1 / +2
Query: 376 SAGVTKTLERYQHCCYNAQDSNNSALSESQSWYQEMSKLRAKFEALQRTQRHLLGEDLGP 555
+A + K LER++ Y + + L +W E ++L+AK E LQR RH LGEDL
Sbjct: 563 NACMEKILERHERYSYAERQLVATDLDSQGNWTLEYNRLKAKVELLQRNHRHYLGEDLDS 742
Query: 556 LSVKELQQLEKQLECALSQARQRKTQVMMEQVEELR 663
+S+KELQ LE+Q++ AL R+RK +M + + EL+
Sbjct: 743 VSLKELQNLEQQIDTALKLIRERKNHLMYQSISELQ 850
>gb|BU896825.1|BU896825 X046D07 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 596
Score = 181 bits (389), Expect = 1e-044
Identities = 84/168 (50%), Positives = 113/168 (67%)
Frame = +1 / +3
Query: 202 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSGRGKLYEFGSA 381
M RG+ ++KRIEN +RQVTFSKRRNGLLKKA+ELSVLCDAEVALI+FS RGKLYEF S+
Sbjct: 84 MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSTRGKLYEFSSS 263
Query: 382 GVTKTLERYQHCCYNAQDSNNSALSESQSWYQEMSKLRAKFEALQRTQRHLLGEDLGPLS 561
+ +T+ERYQ + S+ Q ++ L K E L+ ++R L E L S
Sbjct: 264 SINRTIERYQKRAKDVGISSKMVQDNIQPVKEDTFTLAKKIELLEVSKRKFLREGLETCS 443
Query: 562 VKELQQLEKQLECALSQARQRKTQVMMEQVEELRRTERHLGEMNRQLK 705
+LQQLE QLE +L++ R RK Q+ E++E+L+ E+ L E N +L+
Sbjct: 444 TDDLQQLENQLERSLTRIRARKNQLFRERIEKLKGEEKILLEENTRLR 587
>gb|BU896348.1|BU896348 X039D07 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 739
Score = 180 bits (388), Expect = 1e-044
Identities = 84/165 (50%), Positives = 110/165 (66%)
Frame = +1 / +3
Query: 202 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSGRGKLYEFGSA 381
M RG+ ++KRIEN +RQVTFSKRRNGLLKKA+ELSVLCDAEVALI+FS RGKLYEF S+
Sbjct: 204 MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALILFSTRGKLYEFSSS 383
Query: 382 GVTKTLERYQHCCYNAQDSNNSALSESQSWYQEMSKLRAKFEALQRTQRHLLGEDLGPLS 561
+ +T+ERYQ + S Q ++ L K E L+ ++R LGE L S
Sbjct: 384 SINRTIERYQKRAKDVGISGKMVQDNIQPVKEDAFTLAKKIELLEVSKRKFLGEGLETCS 563
Query: 562 VKELQQLEKQLECALSQARQRKTQVMMEQVEELRRTERHLGEMNR 696
+LQQLE QLE +L++ R RK Q+ E++E+L+ E+ L E R
Sbjct: 564 TDDLQQLENQLERSLTRIRARKNQLFRERIEKLKGEEKILLEETR 698
>gb|DN501305.1|DN501305 UM83TF04.5pR Populus female catkins cDNA library Populus
trichocarpa cDNA clone UM83TF04 5', mRNA sequence
Length = 860
Score = 117 bits (250), Expect(2) = 5e-044
Identities = 47/59 (79%), Positives = 54/59 (91%)
Frame = +1 / +2
Query: 202 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSGRGKLYEFGS 378
MGRG++E+KRIEN NRQVTF KRRNGLLKKAYELSVLCDAEVALI+FS RG+LYE+ +
Sbjct: 89 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYAN 265
Score = 81.7 bits (172), Expect(2) = 5e-044
Identities = 34/110 (30%), Positives = 70/110 (63%)
Frame = +1 / +2
Query: 385 VTKTLERYQHCCYNAQDSNNSALSESQSWYQEMSKLRAKFEALQRTQRHLLGEDLGPLSV 564
+ T++RY+ ++ ++++ +Q + QE +KLR + + LQ + RHL+G+ + LSV
Sbjct: 275 IRSTIDRYKKASSDSSNASSITEINAQYYQQESAKLRQQIQMLQNSNRHLMGDAVSNLSV 454
Query: 565 KELQQLEKQLECALSQARQRKTQVMMEQVEELRRTERHLGEMNRQLKHKL 714
KEL+QLE +LE +++ R +K ++++ ++E L++ E L + L+ K+
Sbjct: 455 KELKQLENRLERGITRIRSKKHELLLAEIEYLQKREIELENESVCLRTKI 604
>gb|CV231279.1|CV231279 WS0194.B21_A22 PT-DX-N-A-10 Populus trichocarpa cDNA clone
WS0194_A22 3', mRNA sequence
Length = 935
Score = 122 bits (262), Expect(2) = 9e-044
Identities = 50/70 (71%), Positives = 62/70 (88%)
Frame = +1 / -3
Query: 202 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSGRGKLYEFGSA 381
M RG+ +++RIEN +RQVTFSKRRNGLLKKA+ELSVLCDAEVALI+FS RGKLYEF S+
Sbjct: 918 MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGKLYEFASS 739
Query: 382 GVTKTLERYQ 411
+ +T+ERY+
Sbjct: 738 SMQETIERYR 709
Score = 75.3 bits (158), Expect(2) = 9e-044
Identities = 36/83 (43%), Positives = 54/83 (65%)
Frame = +1 / -3
Query: 475 QEMSKLRAKFEALQRTQRHLLGEDLGPLSVKELQQLEKQLECALSQARQRKTQVMMEQVE 654
+E + + K E L+ ++R LLGE LG +V+ELQQ+E+QLE ++S R RK QV EQ+E
Sbjct: 645 EEAASMIKKIEHLEVSKRKLLGECLGSCTVEELQQIEQQLERSVSTIRARKNQVFKEQIE 466
Query: 655 ELRRTERHLGEMNRQLKHKLEAE 723
LR+ E+ L N +L + A+
Sbjct: 465 LLRQKEKLLAAENARLSDECGAQ 397
>gb|CV242362.1|CV242362 WS02514.B21.1_N17 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02514_N17 3', mRNA sequence
Length = 912
Score = 122 bits (261), Expect(2) = 1e-043
Identities = 50/70 (71%), Positives = 61/70 (87%)
Frame = +1 / -3
Query: 202 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSGRGKLYEFGSA 381
M RG+ +++RIEN +RQVTFSKRRNGLLKKA+ELSVLCDAEVALI+FS RGKLYEF S
Sbjct: 907 MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGKLYEFAST 728
Query: 382 GVTKTLERYQ 411
+ +T+ERY+
Sbjct: 727 SMQETIERYR 698
Score = 75.3 bits (158), Expect(2) = 1e-043
Identities = 36/83 (43%), Positives = 54/83 (65%)
Frame = +1 / -3
Query: 475 QEMSKLRAKFEALQRTQRHLLGEDLGPLSVKELQQLEKQLECALSQARQRKTQVMMEQVE 654
+E + + K E L+ ++R LLGE LG +V+ELQQ+E+QLE ++S R RK QV EQ+E
Sbjct: 634 EEAASMIKKIEHLEVSKRKLLGECLGSCTVEELQQIEQQLERSVSTIRARKNQVFKEQIE 455
Query: 655 ELRRTERHLGEMNRQLKHKLEAE 723
LR+ E+ L N +L + A+
Sbjct: 454 LLRQKEKLLAAENARLSDECGAQ 386
>gb|BU882889.1|BU882889 UM83TF04 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 588
Score = 117 bits (250), Expect(2) = 2e-043
Identities = 47/59 (79%), Positives = 54/59 (91%)
Frame = +1 / +3
Query: 202 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSGRGKLYEFGS 378
MGRG++E+KRIEN NRQVTF KRRNGLLKKAYELSVLCDAEVALI+FS RG+LYE+ +
Sbjct: 105 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYAN 281
Score = 79.9 bits (168), Expect(2) = 2e-043
Identities = 32/99 (32%), Positives = 64/99 (64%)
Frame = +1 / +3
Query: 385 VTKTLERYQHCCYNAQDSNNSALSESQSWYQEMSKLRAKFEALQRTQRHLLGEDLGPLSV 564
+ T++RY+ ++ ++++ +Q + QE +KLR + + LQ + RHL+G+ + LSV
Sbjct: 291 IRSTIDRYKKASSDSSNASSITEINAQYYQQESAKLRQQIQMLQNSNRHLMGDAVSNLSV 470
Query: 565 KELQQLEKQLECALSQARQRKTQVMMEQVEELRRTERHL 681
KEL+QLE +LE +++ R +K + ++ ++E L++ E L
Sbjct: 471 KELKQLENRLERGITRIRSKKHEXLLAEIEYLQKREIEL 587
>gb|AI161962.1|AI161962 A010P29U Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA 5', mRNA sequence
Length = 548
Score = 177 bits (380), Expect = 2e-043
Identities = 83/166 (50%), Positives = 108/166 (65%)
Frame = +1 / +3
Query: 208 RGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSGRGKLYEFGSAGV 387
RG+ ++KRIEN +RQVTFSKRRNGLLKKA+ELSVLCDAEVALI+FS RGKLYEF S+ +
Sbjct: 48 RGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSTRGKLYEFSSSSM 227
Query: 388 TKTLERYQHCCYNAQDSNNSALSESQSWYQEMSKLRAKFEALQRTQRHLLGEDLGPLSVK 567
+T+ERYQ + S+ Q ++ L K + L+ ++R LLG+ L P +
Sbjct: 228 NRTIERYQKRAKDVGISSKMVKDSMQPVKEDAFTLAKKIDILEVSKRKLLGDGLEPCXID 407
Query: 568 ELQQLEKQLECALSQARQRKTQVMMEQVEELRRTERHLGEMNRQLK 705
ELQQLE LE + R RK Q+ EQVE+L E L N +L+
Sbjct: 408 ELQQLENPLERX*PRIRARKNQLFSEQVEKLEGEEEILMGGNXELR 545
>gb|AF377868.1| Populus tremuloides MADS-box protein PTM5 mRNA, complete cds
Length = 1196
Score = 122 bits (262), Expect(2) = 3e-043
Identities = 50/70 (71%), Positives = 62/70 (88%)
Frame = +1 / +3
Query: 202 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSGRGKLYEFGSA 381
M RG+ +++RIEN +RQVTFSKRRNGLLKKA+ELSVLCDAEVALI+FS RGKLYEF S+
Sbjct: 300 MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGKLYEFASS 479
Query: 382 GVTKTLERYQ 411
+ +T+ERY+
Sbjct: 480 SMQETIERYR 509
Score = 73.5 bits (154), Expect(2) = 3e-043
Identities = 34/83 (40%), Positives = 54/83 (65%)
Frame = +1 / +3
Query: 475 QEMSKLRAKFEALQRTQRHLLGEDLGPLSVKELQQLEKQLECALSQARQRKTQVMMEQVE 654
+E + + K E L+ ++R LLGE LG +++ELQQ+E+QLE ++S R RK QV EQ+E
Sbjct: 573 EEAASMIKKIEHLEVSKRKLLGECLGSCTIEELQQIEQQLERSVSTIRARKNQVFKEQIE 752
Query: 655 ELRRTERHLGEMNRQLKHKLEAE 723
L++ E+ L N +L + A+
Sbjct: 753 LLKQKEKLLAAENARLSDECGAQ 821
>gb|CA925124.1|CA925124 MTU7TL.P13.H01 Aspen leaf cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 702
Score = 122 bits (262), Expect(2) = 3e-043
Identities = 50/70 (71%), Positives = 62/70 (88%)
Frame = +1 / -1
Query: 202 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSGRGKLYEFGSA 381
M RG+ +++RIEN +RQVTFSKRRNGLLKKA+ELSVLCDAEVALI+FS RGKLYEF S+
Sbjct: 678 MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGKLYEFASS 499
Query: 382 GVTKTLERYQ 411
+ +T+ERY+
Sbjct: 498 SMQETIERYR 469
Score = 73.5 bits (154), Expect(2) = 3e-043
Identities = 34/83 (40%), Positives = 54/83 (65%)
Frame = +1 / -1
Query: 475 QEMSKLRAKFEALQRTQRHLLGEDLGPLSVKELQQLEKQLECALSQARQRKTQVMMEQVE 654
+E + + K E L+ ++R LLGE LG +++ELQQ+E+QLE ++S R RK QV EQ+E
Sbjct: 405 EEAASMIKKIEHLEVSKRKLLGECLGSCTIEELQQIEQQLEKSVSTIRARKNQVFKEQIE 226
Query: 655 ELRRTERHLGEMNRQLKHKLEAE 723
L++ E+ L N +L + A+
Sbjct: 225 LLKQKEKLLAAENARLSDECGAQ 157
>gb|DT524337.1|DT524337 WS02042.C21.1_F18 PTxN-IB-N-A-11 Populus trichocarpa x Populus
nigra cDNA clone WS02042_F18 3', mRNA sequence
Length = 884
Score = 121 bits (259), Expect(2) = 6e-043
Identities = 49/68 (72%), Positives = 60/68 (88%)
Frame = +1 / -1
Query: 208 RGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSGRGKLYEFGSAGV 387
RG+ +++RIEN +RQVTFSKRRNGLLKKA+ELSVLCDAEVALI+FS RGKLYEF S +
Sbjct: 884 RGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGKLYEFASTSM 705
Query: 388 TKTLERYQ 411
+T+ERY+
Sbjct: 704 QETIERYR 681
Score = 73.9 bits (155), Expect(2) = 6e-043
Identities = 35/76 (46%), Positives = 51/76 (67%)
Frame = +1 / -1
Query: 475 QEMSKLRAKFEALQRTQRHLLGEDLGPLSVKELQQLEKQLECALSQARQRKTQVMMEQVE 654
+E + + K E L+ ++R LLGE LG +V+ELQQ+E+QLE ++S R RK QV EQ+E
Sbjct: 617 EEAASMIKKIEHLEVSKRKLLGECLGSCTVEELQQIEQQLERSVSTIRARKNQVFKEQIE 438
Query: 655 ELRRTERHLGEMNRQL 702
LR+ E+ L N +L
Sbjct: 437 LLRQKEKLLAAENARL 390
>gb|CA924456.1|CA924456 MTU7CL.P5.H08 Aspen leaf cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 693
Score = 120 bits (256), Expect(2) = 1e-042
Identities = 49/70 (70%), Positives = 61/70 (87%)
Frame = +1 / -1
Query: 202 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSGRGKLYEFGSA 381
M RG+ +++RIEN +RQV FSKRRNGLLKKA+ELSVLCDAEVALI+FS RGKLYEF S+
Sbjct: 678 MVRGKTQMRRIENATSRQVPFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGKLYEFASS 499
Query: 382 GVTKTLERYQ 411
+ +T+ERY+
Sbjct: 498 SMQETIERYR 469
Score = 73.9 bits (155), Expect(2) = 1e-042
Identities = 35/83 (42%), Positives = 54/83 (65%)
Frame = +1 / -1
Query: 475 QEMSKLRAKFEALQRTQRHLLGEDLGPLSVKELQQLEKQLECALSQARQRKTQVMMEQVE 654
+E + + K E L+ ++R LLGE LG +V+ELQQ+E+QLE ++S R RK QV EQ+E
Sbjct: 405 EEAASMIKKIEHLEVSKRKLLGECLGSCTVEELQQIEQQLERSVSTIRARKNQVFKEQIE 226
Query: 655 ELRRTERHLGEMNRQLKHKLEAE 723
L++ E+ L N +L + A+
Sbjct: 225 LLKQKEKLLAAENARLSDECGAQ 157
>gb|BU892010.1|BU892010 P058B10 Populus petioles cDNA library Populus tremula cDNA 5 prime,
mRNA sequence
Length = 708
Score = 118 bits (253), Expect(2) = 1e-041
Identities = 49/73 (67%), Positives = 61/73 (83%)
Frame = +1 / +2
Query: 193 EVGMGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSGRGKLYEF 372
E MGRG+VELKRIEN +RQVTFSKRRNGLLKKA+ELS+LC+AEV+LIIFS GK Y+F
Sbjct: 2 ETKMGRGKVELKRIENSASRQVTFSKRRNGLLKKAFELSILCEAEVSLIIFSPTGKFYQF 181
Query: 373 GSAGVTKTLERYQ 411
S + +++ RY+
Sbjct: 182 SSHDMERSVARYR 220
Score = 72.5 bits (152), Expect(2) = 1e-041
Identities = 30/94 (31%), Positives = 55/94 (58%)
Frame = +1 / +2
Query: 436 SNNSALSESQSWYQEMSKLRAKFEALQRTQRHLLGEDLGPLSVKELQQLEKQLECALSQA 615
+N+ + W E+ +LR + RH +GED+ PL +KEL+QLE+QL+ + +
Sbjct: 242 TNDQRSRSLEFWRCEIEELRRTINKTEAQLRHFIGEDIAPLGLKELKQLERQLKTGVERI 421
Query: 616 RQRKTQVMMEQVEELRRTERHLGEMNRQLKHKLE 717
R +K + + E ++ L+ +R L E N +L+ +L+
Sbjct: 422 RCKKKRAISEHIKLLKSEQRALQEENARLQKRLQ 523
>gb|DN484014.1|DN484014 PSO205E04 Populus tomentiglandulosa T. Lee cDNA library Populus
tomentiglandulosa cDNA, mRNA sequence
Length = 810
Score = 119 bits (255), Expect(2) = 3e-041
Identities = 50/70 (71%), Positives = 59/70 (84%)
Frame = +1 / +1
Query: 202 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSGRGKLYEFGSA 381
MGRG+VELKRIEN RQVTFSKRRNGLLKKA+ELS+LCDAEV+LIIFS GK Y+F S
Sbjct: 49 MGRGKVELKRIENPTRRQVTFSKRRNGLLKKAFELSILCDAEVSLIIFSPTGKFYQFASH 228
Query: 382 GVTKTLERYQ 411
+ +T+ RY+
Sbjct: 229 EMERTVARYR 258
Score = 69.8 bits (146), Expect(2) = 3e-041
Identities = 30/93 (32%), Positives = 53/93 (56%)
Frame = +1 / +1
Query: 436 SNNSALSESQSWYQEMSKLRAKFEALQRTQRHLLGEDLGPLSVKELQQLEKQLECALSQA 615
SN S + W E+ +L+ ++ RH +GED+ L +KEL+QLE+QL+ + +
Sbjct: 280 SNGSHARSLEFWRCEIEELQKTINEMEAQLRHCIGEDIEMLGMKELKQLERQLKTGVERV 459
Query: 616 RQRKTQVMMEQVEELRRTERHLGEMNRQLKHKL 714
R +K ++ + V L+ +R + E N +LK +L
Sbjct: 460 RAKKLRIAADHVNWLKGKQRSIQEENARLKKRL 558
>gb|BU882965.1|BU882965 UM84TE12 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 562
Score = 168 bits (362), Expect = 6e-041
Identities = 70/122 (57%), Positives = 94/122 (77%)
Frame = +1 / +1
Query: 202 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSGRGKLYEFGSA 381
+GRG+VE+KRIEN NRQVTF KRRNGLLKKAYELSVLCDAEVALI+FS RG+LYE+ +
Sbjct: 196 LGRGKVEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNN 375
Query: 382 GVTKTLERYQHCCYNAQDSNNSALSESQSWYQEMSKLRAKFEALQRTQRHLLGEDLGPLS 561
V T+ERY+ C ++ ++ + + + +Q + QE +KLR++ LQ + R++LGE L LS
Sbjct: 376 SVKSTIERYKKACADSSNNGSVSEANAQFYQQEAAKLRSQIGNLQNSNRNMLGESLSALS 555
Query: 562 VK 567
VK
Sbjct: 556 VK 561
>gb|BU869954.1|BU869954 Q006E04 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 713
Score = 117 bits (250), Expect(2) = 1e-040
Identities = 48/70 (68%), Positives = 60/70 (85%)
Frame = +1 / +3
Query: 202 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSGRGKLYEFGSA 381
MGRG+VELKRIEN +RQVTFSKRRNGLLKKA+ELS+LC+AEV+LIIFS GK Y+F S
Sbjct: 66 MGRGKVELKRIENSTSRQVTFSKRRNGLLKKAFELSILCEAEVSLIIFSPTGKFYQFSSH 245
Query: 382 GVTKTLERYQ 411
+ +++ RY+
Sbjct: 246 DMERSVARYR 275
Score = 70.3 bits (147), Expect(2) = 1e-040
Identities = 29/93 (31%), Positives = 54/93 (58%)
Frame = +1 / +3
Query: 436 SNNSALSESQSWYQEMSKLRAKFEALQRTQRHLLGEDLGPLSVKELQQLEKQLECALSQA 615
+N+ + W E+ +LR + RH +GED+ PL +KEL+QLE+QL+ + +
Sbjct: 297 TNDQRSRSLEFWRCEIEELRRTINKTEAQLRHFIGEDIAPLGLKELKQLERQLKTGVERI 476
Query: 616 RQRKTQVMMEQVEELRRTERHLGEMNRQLKHKL 714
R +K + + E ++ L+ +R L E N +L+ ++
Sbjct: 477 RCKKKRAISEHIKLLKSEQRALQEENARLQKRV 575
>gb|BU897836.1|BU897836 X070E03 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 709
Score = 116 bits (248), Expect(2) = 1e-040
Identities = 48/73 (65%), Positives = 61/73 (83%)
Frame = +1 / +3
Query: 193 EVGMGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSGRGKLYEF 372
E MGRG+VELKRIEN +RQVTFSKRRNGLLKKA+ELS+LC+AEV+LIIFS GK ++F
Sbjct: 3 ETKMGRGKVELKRIENSASRQVTFSKRRNGLLKKAFELSILCEAEVSLIIFSPTGKFHQF 182
Query: 373 GSAGVTKTLERYQ 411
S + +++ RY+
Sbjct: 183 SSHDMERSVARYR 221
Score = 71.2 bits (149), Expect(2) = 1e-040
Identities = 29/94 (30%), Positives = 55/94 (58%)
Frame = +1 / +3
Query: 436 SNNSALSESQSWYQEMSKLRAKFEALQRTQRHLLGEDLGPLSVKELQQLEKQLECALSQA 615
+N+ + W E+ +LR + RH +GED+ PL +KEL+QLE+QL+ + +
Sbjct: 243 TNDQRSRSLEFWICEIEELRRTINKTEAQLRHFIGEDIAPLGLKELKQLERQLKTGVERI 422
Query: 616 RQRKTQVMMEQVEELRRTERHLGEMNRQLKHKLE 717
R +K + + E ++ L+ +R L + N +L+ +L+
Sbjct: 423 RCKKKRAISEHIKLLKSEQRALQKENARLQKRLQ 524
>gb|DT493519.1|DT493519 WS0111.BR_J17 PT-P-FL-A-2 Populus trichocarpa cDNA clone WS0111_J17
5', mRNA sequence
Length = 592
Score = 112 bits (239), Expect(2) = 2e-040
Identities = 46/68 (67%), Positives = 58/68 (85%)
Frame = +1 / +1
Query: 208 RGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSGRGKLYEFGSAGV 387
RG+VELKRIEN +RQVTFSKRRNGLLKKA+ELS+LC+AEV+LIIFS GK Y+F S +
Sbjct: 22 RGKVELKRIENSASRQVTFSKRRNGLLKKAFELSILCEAEVSLIIFSPSGKFYQFSSHDM 201
Query: 388 TKTLERYQ 411
+++ RY+
Sbjct: 202 ERSVARYR 225
Score = 74.4 bits (156), Expect(2) = 2e-040
Identities = 31/93 (33%), Positives = 55/93 (59%)
Frame = +1 / +1
Query: 436 SNNSALSESQSWYQEMSKLRAKFEALQRTQRHLLGEDLGPLSVKELQQLEKQLECALSQA 615
+N+ + W E+ +LR + RH +GED+ PL +KEL+QLE+QL+ + +
Sbjct: 247 TNDQRSRSLEFWRCEIEELRRTITKTEAQLRHFIGEDIAPLGLKELKQLERQLKTGVERI 426
Query: 616 RQRKTQVMMEQVEELRRTERHLGEMNRQLKHKL 714
R +K +V+ E ++ L+ +R L E N +L+ +L
Sbjct: 427 RSKKKRVISEHIKLLKSEQRALQEENARLQKRL 525
>gb|BU875666.1|BU875666 V009G10 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 642
Score = 165 bits (354), Expect = 7e-040
Identities = 73/139 (52%), Positives = 101/139 (72%)
Frame = +1 / +1
Query: 202 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSGRGKLYEFGSA 381
M RG+ +++RIEN +RQVTFSKRRNGLLKKA+ELSVLCDAEVA+I+F+ RGKLYEFGS+
Sbjct: 226 MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVAVIVFAPRGKLYEFGSS 405
Query: 382 GVTKTLERYQHCCYNAQDSNNSALSESQSWYQEMSKLRAKFEALQRTQRHLLGEDLGPLS 561
V +T+ERYQ + + ++ + E + + K E L+ ++R LLGE LG +
Sbjct: 406 SVQETIERYQRHVKESNTNKQTSELNMEQLKGEAASMIKKIEILEVSKRKLLGECLGSCT 585
Query: 562 VKELQQLEKQLECALSQAR 618
V+ELQQ+E+QLE ++S R
Sbjct: 586 VEELQQIEQQLERSVSTIR 642
>gb|BU895896.1|BU895896 X032F06 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 753
Score = 111 bits (237), Expect(2) = 2e-039
Identities = 46/69 (66%), Positives = 58/69 (84%)
Frame = +1 / +3
Query: 205 GRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSGRGKLYEFGSAG 384
GRG+VEL RIEN +RQVTFSKRRNGLLKKA+ELS+LC+AEV+LIIFS GK Y+F S
Sbjct: 18 GRGKVELIRIENSASRQVTFSKRRNGLLKKAFELSILCEAEVSLIIFSPTGKFYQFSSHD 197
Query: 385 VTKTLERYQ 411
+ +++ RY+
Sbjct: 198 MERSVARYR 224
Score = 72.5 bits (152), Expect(2) = 2e-039
Identities = 30/94 (31%), Positives = 55/94 (58%)
Frame = +1 / +3
Query: 436 SNNSALSESQSWYQEMSKLRAKFEALQRTQRHLLGEDLGPLSVKELQQLEKQLECALSQA 615
+N+ + W E+ +LR + RH +GED+ PL +KEL+QLE+QL+ + +
Sbjct: 246 TNDQRSRSLEFWRCEIEELRRTINKTEAQLRHFIGEDIAPLGLKELKQLERQLKTGVERI 425
Query: 616 RQRKTQVMMEQVEELRRTERHLGEMNRQLKHKLE 717
R +K + + E ++ L+ +R L E N +L+ +L+
Sbjct: 426 RCKKKRAISEHIKLLKSEQRALQEENARLQKRLQ 527
>gb|BU891075.1|BU891075 P045E12 Populus petioles cDNA library Populus tremula cDNA 5 prime,
mRNA sequence
Length = 529
Score = 163 bits (351), Expect = 2e-039
Identities = 71/132 (53%), Positives = 97/132 (73%)
Frame = +1 / +1
Query: 202 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSGRGKLYEFGSA 381
M RG+ +++RIEN +RQVTFSKRRNGLLKKA+ELSVLCDAEVA+I+FS RGKLYEFGS+
Sbjct: 130 MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVAVIVFSPRGKLYEFGSS 309
Query: 382 GVTKTLERYQHCCYNAQDSNNSALSESQSWYQEMSKLRAKFEALQRTQRHLLGEDLGPLS 561
V +T+ERYQ + + ++ + E + + K E L+ ++R LLGE LG +
Sbjct: 310 SVQETIERYQRHVKESNTNKQTSEQNVEQLKGEAASMIKKIEILEVSKRKLLGECLGSCT 489
Query: 562 VKELQQLEKQLE 597
++ELQQ+E+QLE
Sbjct: 490 IEELQQIEQQLE 525
>gb|DN494603.1|DN494603 M112C09.5pR Populus female catkins cDNA library Populus trichocarpa
cDNA clone M112C09 5', mRNA sequence
Length = 566
Score = 117 bits (250), Expect(2) = 2e-039
Identities = 47/59 (79%), Positives = 57/59 (96%)
Frame = +1 / +1
Query: 202 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSGRGKLYEFGS 378
MGRGR++LKRIENKINRQVTFSKRR+GLLKKA+E+SVLCDAEVALI+FS +GKL+E+ +
Sbjct: 148 MGRGRIQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYAT 324
Score = 66.1 bits (138), Expect(2) = 2e-039
Identities = 26/47 (55%), Positives = 35/47 (74%)
Frame = +1 / +1
Query: 466 SWYQEMSKLRAKFEALQRTQRHLLGEDLGPLSVKELQQLEKQLECAL 606
SW E +KL+A+ + LQR QRH +GEDL L++KELQ LE Q++ AL
Sbjct: 418 SWTLEYAKLKARVDVLQRNQRHFMGEDLDSLNIKELQNLEHQIDSAL 558
>gb|CK096310.1|CK096310 UB10CPE08.3pR Populus active cambium cDNA library Populus tremula
cDNA clone UB10CPE08 3', mRNA sequence
Length = 829
Score = 107 bits (228), Expect(2) = 7e-038
Identities = 44/59 (74%), Positives = 53/59 (89%)
Frame = +1 / -1
Query: 202 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSGRGKLYEFGS 378
M RG+V+LKRIEN +RQVTFSKR+NGLLKKAYELS+LCDAEVA+IIFS +G L++F S
Sbjct: 709 MARGKVQLKRIENATSRQVTFSKRKNGLLKKAYELSILCDAEVAVIIFSQKGTLFKFAS 533
Score = 71.2 bits (149), Expect(2) = 7e-038
Identities = 34/83 (40%), Positives = 49/83 (59%)
Frame = +1 / -1
Query: 475 QEMSKLRAKFEALQRTQRHLLGEDLGPLSVKELQQLEKQLECALSQARQRKTQVMMEQVE 654
QE + K E ++ QR LLG+DL S +EL + QLE +LS R RKTQ+ EQ+E
Sbjct: 430 QESENMAKKIEIIEILQRKLLGQDLDSCSPEELHDIGNQLEISLSNIRARKTQLFKEQIE 251
Query: 655 ELRRTERHLGEMNRQLKHKLEAE 723
+L+ ER L N +L + +A+
Sbjct: 250 QLKAKERLLLMENARLTKQRDAQ 182
>gb|DT510135.1|DT510135 WS02425.BR_L05 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02425_L05 5', mRNA sequence
Length = 822
Score = 105 bits (225), Expect(2) = 4e-037
Identities = 43/59 (72%), Positives = 53/59 (89%)
Frame = +1 / +1
Query: 202 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSGRGKLYEFGS 378
M RG+V+LKRIEN +RQVTFSKR+NGLLKKAYELS+LCDAEVA+I+FS +G L++F S
Sbjct: 337 MARGKVQLKRIENATSRQVTFSKRKNGLLKKAYELSILCDAEVAVIMFSQKGTLFKFAS 513
Score = 69.8 bits (146), Expect(2) = 4e-037
Identities = 31/69 (44%), Positives = 44/69 (63%)
Frame = +1 / +1
Query: 475 QEMSKLRAKFEALQRTQRHLLGEDLGPLSVKELQQLEKQLECALSQARQRKTQVMMEQVE 654
QE + + K E ++ QR LLG+DL S +EL ++ QLE +LS R RKTQ+ EQ+E
Sbjct: 613 QESANMAKKIEMIEILQRKLLGQDLDSCSPEELHDIDNQLEISLSNIRARKTQLFKEQIE 792
Query: 655 ELRRTERHL 681
+L+ ER L
Sbjct: 793 QLQAKERLL 819
>gb|DT514757.1|DT514757 WS02425.B21_L05 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02425_L05 3', mRNA sequence
Length = 825
Score = 101 bits (215), Expect(2) = 8e-037
Identities = 41/56 (73%), Positives = 51/56 (91%)
Frame = +1 / -2
Query: 211 GRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSGRGKLYEFGS 378
G+V+LKRIEN +RQVTFSKR+NGLLKKAYELS+LCDAEVA+I+FS +G L++F S
Sbjct: 824 GKVQLKRIENATSRQVTFSKRKNGLLKKAYELSILCDAEVAVIMFSQKGTLFKFAS 657
Score = 73.5 bits (154), Expect(2) = 8e-037
Identities = 34/83 (40%), Positives = 51/83 (61%)
Frame = +1 / -2
Query: 475 QEMSKLRAKFEALQRTQRHLLGEDLGPLSVKELQQLEKQLECALSQARQRKTQVMMEQVE 654
QE + + K E ++ QR LLG+DL S +EL ++ QLE +LS R RKTQ+ EQ+E
Sbjct: 557 QESANMAKKIEMIEILQRKLLGQDLDSCSPEELHDIDNQLEISLSNIRARKTQLFKEQIE 378
Query: 655 ELRRTERHLGEMNRQLKHKLEAE 723
+L+ ER L N +L + +A+
Sbjct: 377 QLQAKERLLLMENARLTKQCDAQ 309
>gb|BU883614.1|BU883614 UM95TA01 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 613
Score = 154 bits (331), Expect = 1e-036
Identities = 63/113 (55%), Positives = 88/113 (77%)
Frame = +1 / +3
Query: 202 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSGRGKLYEFGSA 381
+GRG+VE+KRIEN NRQVTF KRR+GLLKKAYELSVLCDAEVALI+FS RG+LYE+ +
Sbjct: 273 LGRGKVEIKRIENTTNRQVTFCKRRSGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSND 452
Query: 382 GVTKTLERYQHCCYNAQDSNNSALSESQSWYQEMSKLRAKFEALQRTQRHLLG 540
V T+ERY+ ++ ++ + + + +Q + QE +KLR++ LQ++ RH+LG
Sbjct: 453 SVKSTIERYKKASADSSNTGSVSEANAQYYQQEAAKLRSQIGNLQKSNRHMLG 611
Database: Populus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:49 PM
Number of letters in database: 203,408,664
Number of sequences in database: 369,679
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 599,738,704
Number of Sequences: 369679
Number of extensions: 8771642
Number of successful extensions: 45500
Number of sequences better than 1.0e-020: 152
length of database: 67,802,888
effective HSP length: 53
effective length of database: 48,209,901
effective search space used: 17693033667
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)