TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 8010462.2.1
(638 letters)
Database: Populus_nucl_with_EST.fasta
369,679 sequences; 203,408,664 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BI131326.1|BI131326 G119P27Y Populus cambium cDNA librar... 80 2e-025
dbj|D30657.1|POPPALB Populus kitakamiensis gene for phenyla... 82 2e-025
dbj|D43802.1|POPPALG2BA Populus kitakamiensis gene for phen... 80 9e-025
gb|CV263762.1|CV263762 WS02022.B21_L12 PTxN-IB-N-A-11 Popul... 80 9e-025
gb|CF234810.1|CF234810 PtaJXT0015D6D0608 Poplar cDNA librar... 80 9e-025
gb|CK318616.1|CK318616 X9P01c10 Populus stem seasonal libra... 80 9e-025
gb|DT488066.1|DT488066 WS02535.B21_G17 PT-MB-N-A-15 Populus... 80 9e-025
gb|CK093403.1|CK093403 G119P27.3pR Populus tension wood cDN... 80 9e-025
gb|CK103475.1|CK103475 G119P27.5pR Populus tension wood cDN... 80 9e-025
gb|CV230043.1|CV230043 WS01915.B21_E01 PT-DX-N-A-10 Populus... 80 9e-025
gb|BU897133.1|BU897133 X051H08 Populus wood cDNA library Po... 80 9e-025
gb|BI132312.1|BI132312 G134P76Y Populus cambium cDNA librar... 80 9e-025
gb|AY372451.1| Populus balsamifera subsp. trichocarpa x Pop... 80 3e-024
gb|BI128578.1|BI128578 G078P44Y Populus cambium cDNA librar... 75 7e-024
gb|BI120682.1|BI120682 F020P29Y Populus flower cDNA library... 74 8e-024
gb|BI120888.1|BI120888 F024P64Y Populus flower cDNA library... 74 8e-024
gb|BI131692.1|BI131692 G124P41Y Populus cambium cDNA librar... 75 8e-024
gb|CX660019.1|CX660019 PO01017A04 Poplar SC cDNA library Po... 75 8e-024
gb|AF480620.1| Populus tremuloides phenylalanine ammonia-ly... 74 1e-023
gb|DT519436.1|DT519436 WS02441.B21_I20 PTxD-ICC-N-A-14 Popu... 74 1e-023
gb|CV281497.1|CV281497 WS0182.B21_B10 PTxD-IL-N-A-9 Populus... 74 1e-023
gb|CK091124.1|CK091124 F050P34.3pR Populus flower cDNA libr... 74 1e-023
gb|AI166713.1|AI166713 xylem.est.518 Poplar xylem Lambda ZA... 74 1e-023
gb|CV226330.1|CV226330 WS0163.B21_P08 PT-DX-A-7 Populus tri... 74 1e-023
gb|CV227422.1|CV227422 WS0167.B21_C10 PT-DX-A-7 Populus tri... 74 1e-023
gb|CV228686.1|CV228686 WS01910.B21_O18 PT-DX-N-A-10 Populus... 74 1e-023
gb|CK090783.1|CK090783 F024P64.3pR Populus flower cDNA libr... 74 1e-023
gb|CK101143.1|CK101143 F024P64.5pR Populus flower cDNA libr... 74 1e-023
gb|CV283895.1|CV283895 WS0188.B21_J10 PTxD-IL-N-A-9 Populus... 73 3e-023
gb|CV258625.1|CV258625 WS0201.B21_B02 PTxN-IB-N-A-11 Populu... 72 5e-023
gb|CK092635.1|CK092635 G089P92.3pR Populus tension wood cDN... 72 6e-023
gb|BU895519.1|BU895519 X025C02 Populus wood cDNA library Po... 72 6e-023
gb|BU895655.1|BU895655 X028H12 Populus wood cDNA library Po... 71 1e-022
gb|BU895470.1|BU895470 X024E05 Populus wood cDNA library Po... 71 1e-022
gb|BU895799.1|BU895799 X031C02 Populus wood cDNA library Po... 71 1e-022
gb|DT469211.1|DT469211 WS01917.C21_B16 PT-DX-N-A-10 Populus... 69 5e-022
gb|CK319334.1|CK319334 X9P09f01 Populus stem seasonal libra... 69 1e-021
gb|CX658273.1|CX658273 PO01012B03 Poplar SC cDNA library Po... 73 1e-021
gb|CV283066.1|CV283066 WS0186.B21_F12 PTxD-IL-N-A-9 Populus... 69 2e-021
gb|BI138266.1|BI138266 F102P32Y Populus flower cDNA library... 66 2e-021
gb|L11747.1|POPPALGA Populus x generosa tissue-type leaf ph... 68 3e-021
gb|DT476995.1|DT476995 WS01231.B21_J06 PT-GT-FL-A-3 Populus... 68 3e-021
gb|CV267232.1|CV267232 WS02031.B21_D02 PTxN-IB-N-A-11 Popul... 68 3e-021
gb|CV236539.1|CV236539 WS01224.B21.1_H21 PT-GT-FL-A-3 Popul... 68 3e-021
gb|CV268596.1|CV268596 WS0205.B21_O21 PTxN-IB-N-A-11 Populu... 68 3e-021
gb|DT521300.1|DT521300 WS02033.B21_O19 PTxN-IB-N-A-11 Popul... 68 3e-021
gb|CV234789.1|CV234789 WS01216.B21_F03 PT-GT-FL-A-3 Populus... 68 3e-021
gb|BI129170.1|BI129170 G086P80Y Populus cambium cDNA librar... 68 3e-021
gb|CV263001.1|CV263001 WS02020.B21_B08 PTxN-IB-N-A-11 Popul... 68 3e-021
gb|CF227310.1|CF227310 PtaD2B11B1103 Poplar cDNA library fr... 68 3e-021
gb|CV260470.1|CV260470 WS02014.B21_C15 PTxN-IB-N-A-11 Popul... 68 3e-021
gb|BU809549.1|BU809549 UL59TB10 Populus leaf cDNA library P... 68 6e-021
>gb|BI131326.1|BI131326 G119P27Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 362
Score = 80.3 bits (169), Expect(3) = 2e-025
Identities = 29/41 (70%), Positives = 36/41 (87%)
Frame = +1 / +2
Query: 73 VESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
VE+G P +PNRI+ECRSYPLY+FVREE+GT LTGE+ +SP
Sbjct: 80 VENGNPAIPNRIKECRSYPLYKFVREELGTSLLTGEKVKSP 202
Score = 52.8 bits (109), Expect(3) = 2e-025
Identities = 19/21 (90%), Positives = 21/21 (100%)
Frame = +1 / +2
Query: 247 IDPLLECLKEWNGAPLPLC*A 309
IDPLLECLKEW+GAPLP+C*A
Sbjct: 251 IDPLLECLKEWDGAPLPIC*A 313
Score = 19.4 bits (36), Expect(3) = 2e-025
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +3 / +3
Query: 195 PARSSTRCS 221
PARSSTR S
Sbjct: 201 PARSSTRFS 227
>dbj|D30657.1|POPPALB Populus kitakamiensis gene for phenylalanine ammonia-lyase, complete
cds, clone palg2a
Length = 4080
Score = 81.7 bits (172), Expect(2) = 2e-025
Identities = 30/41 (73%), Positives = 37/41 (90%)
Frame = +1 / +2
Query: 73 VESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
VE+G P+VPNRI+ECRSYPLY+FVREE+GT LTGE+ +SP
Sbjct: 3401 VENGNPVVPNRIKECRSYPLYKFVREELGTSLLTGEKVKSP 3523
Score = 53.8 bits (111), Expect(2) = 2e-025
Identities = 19/21 (90%), Positives = 21/21 (100%)
Frame = +1 / +2
Query: 247 IDPLLECLKEWNGAPLPLC*A 309
+DPLLECLKEWNGAPLP+C*A
Sbjct: 3572 MDPLLECLKEWNGAPLPIC*A 3634
>dbj|D43802.1|POPPALG2BA Populus kitakamiensis gene for phenylalanine ammonia-lyase, complete
cds (exon 1 and exon 2)
Length = 4652
Score = 80.3 bits (169), Expect(2) = 9e-025
Identities = 29/41 (70%), Positives = 36/41 (87%)
Frame = +1 / +1
Query: 73 VESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
VE+G P +PNRI+ECRSYPLY+FVREE+GT LTGE+ +SP
Sbjct: 4012 VENGNPAIPNRIKECRSYPLYKFVREELGTSLLTGEKVKSP 4134
Score = 52.8 bits (109), Expect(2) = 9e-025
Identities = 19/21 (90%), Positives = 21/21 (100%)
Frame = +1 / +1
Query: 247 IDPLLECLKEWNGAPLPLC*A 309
IDPLLECLKEW+GAPLP+C*A
Sbjct: 4183 IDPLLECLKEWDGAPLPIC*A 4245
>gb|CV263762.1|CV263762 WS02022.B21_L12 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02022_L12 3', mRNA sequence
Length = 939
Score = 80.3 bits (169), Expect(2) = 9e-025
Identities = 29/41 (70%), Positives = 36/41 (87%)
Frame = +1 / -1
Query: 73 VESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
VE+G P +PNRI+ECRSYPLY+FVREE+GT LTGE+ +SP
Sbjct: 429 VENGNPAIPNRIKECRSYPLYKFVREELGTSLLTGEKVKSP 307
Score = 52.8 bits (109), Expect(2) = 9e-025
Identities = 19/21 (90%), Positives = 21/21 (100%)
Frame = +1 / -1
Query: 247 IDPLLECLKEWNGAPLPLC*A 309
IDPLLECLKEW+GAPLP+C*A
Sbjct: 258 IDPLLECLKEWDGAPLPIC*A 196
>gb|CF234810.1|CF234810 PtaJXT0015D6D0608 Poplar cDNA library from young tension xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 757
Score = 80.3 bits (169), Expect(2) = 9e-025
Identities = 29/41 (70%), Positives = 36/41 (87%)
Frame = +1 / +3
Query: 73 VESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
VE+G P +PNRI+ECRSYPLY+FVREE+GT LTGE+ +SP
Sbjct: 405 VENGNPAIPNRIKECRSYPLYKFVREELGTSLLTGEKVKSP 527
Score = 52.8 bits (109), Expect(2) = 9e-025
Identities = 19/21 (90%), Positives = 21/21 (100%)
Frame = +1 / +3
Query: 247 IDPLLECLKEWNGAPLPLC*A 309
IDPLLECLKEW+GAPLP+C*A
Sbjct: 576 IDPLLECLKEWDGAPLPIC*A 638
>gb|CK318616.1|CK318616 X9P01c10 Populus stem seasonal library Populus deltoides cDNA, mRNA
sequence
Length = 635
Score = 80.3 bits (169), Expect(2) = 9e-025
Identities = 29/41 (70%), Positives = 36/41 (87%)
Frame = +1 / +1
Query: 73 VESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
VE+G P +PNRI+ECRSYPLY+FVREE+GT LTGE+ +SP
Sbjct: 214 VENGNPAIPNRIKECRSYPLYKFVREELGTSLLTGEKVKSP 336
Score = 52.8 bits (109), Expect(2) = 9e-025
Identities = 19/21 (90%), Positives = 21/21 (100%)
Frame = +1 / +1
Query: 247 IDPLLECLKEWNGAPLPLC*A 309
IDPLLECLKEW+GAPLP+C*A
Sbjct: 385 IDPLLECLKEWDGAPLPIC*A 447
>gb|DT488066.1|DT488066 WS02535.B21_G17 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02535_G17 3', mRNA sequence
Length = 633
Score = 80.3 bits (169), Expect(2) = 9e-025
Identities = 29/41 (70%), Positives = 36/41 (87%)
Frame = +1 / -1
Query: 73 VESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
VE+G P +PNRI+ECRSYPLY+FVREE+GT LTGE+ +SP
Sbjct: 441 VENGNPAIPNRIKECRSYPLYKFVREELGTSLLTGEKVKSP 319
Score = 52.8 bits (109), Expect(2) = 9e-025
Identities = 19/21 (90%), Positives = 21/21 (100%)
Frame = +1 / -1
Query: 247 IDPLLECLKEWNGAPLPLC*A 309
IDPLLECLKEW+GAPLP+C*A
Sbjct: 270 IDPLLECLKEWDGAPLPIC*A 208
>gb|CK093403.1|CK093403 G119P27.3pR Populus tension wood cDNA library Populus tremula x
Populus tremuloides cDNA clone G119P27 3', mRNA sequence
Length = 491
Score = 80.3 bits (169), Expect(2) = 9e-025
Identities = 29/41 (70%), Positives = 36/41 (87%)
Frame = +1 / -3
Query: 73 VESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
VE+G P +PNRI+ECRSYPLY+FVREE+GT LTGE+ +SP
Sbjct: 411 VENGNPAIPNRIKECRSYPLYKFVREELGTSLLTGEKVKSP 289
Score = 52.8 bits (109), Expect(2) = 9e-025
Identities = 19/21 (90%), Positives = 21/21 (100%)
Frame = +1 / -3
Query: 247 IDPLLECLKEWNGAPLPLC*A 309
IDPLLECLKEW+GAPLP+C*A
Sbjct: 240 IDPLLECLKEWDGAPLPIC*A 178
>gb|CK103475.1|CK103475 G119P27.5pR Populus tension wood cDNA library Populus tremula x
Populus tremuloides cDNA clone G119P27 5', mRNA sequence
Length = 471
Score = 80.3 bits (169), Expect(2) = 9e-025
Identities = 29/41 (70%), Positives = 36/41 (87%)
Frame = +1 / +3
Query: 73 VESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
VE+G P +PNRI+ECRSYPLY+FVREE+GT LTGE+ +SP
Sbjct: 81 VENGNPAIPNRIKECRSYPLYKFVREELGTSLLTGEKVKSP 203
Score = 52.8 bits (109), Expect(2) = 9e-025
Identities = 19/21 (90%), Positives = 21/21 (100%)
Frame = +1 / +3
Query: 247 IDPLLECLKEWNGAPLPLC*A 309
IDPLLECLKEW+GAPLP+C*A
Sbjct: 252 IDPLLECLKEWDGAPLPIC*A 314
>gb|CV230043.1|CV230043 WS01915.B21_E01 PT-DX-N-A-10 Populus trichocarpa cDNA clone
WS01915_E01 3', mRNA sequence
Length = 460
Score = 80.3 bits (169), Expect(2) = 9e-025
Identities = 29/41 (70%), Positives = 36/41 (87%)
Frame = +1 / -2
Query: 73 VESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
VE+G P +PNRI+ECRSYPLY+FVREE+GT LTGE+ +SP
Sbjct: 414 VENGNPAIPNRIKECRSYPLYKFVREELGTSLLTGEKVKSP 292
Score = 52.8 bits (109), Expect(2) = 9e-025
Identities = 19/21 (90%), Positives = 21/21 (100%)
Frame = +1 / -2
Query: 247 IDPLLECLKEWNGAPLPLC*A 309
IDPLLECLKEW+GAPLP+C*A
Sbjct: 243 IDPLLECLKEWDGAPLPIC*A 181
>gb|BU897133.1|BU897133 X051H08 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 451
Score = 80.3 bits (169), Expect(2) = 9e-025
Identities = 29/41 (70%), Positives = 36/41 (87%)
Frame = +1 / +2
Query: 73 VESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
VE+G P +PNRI+ECRSYPLY+FVREE+GT LTGE+ +SP
Sbjct: 86 VENGNPAIPNRIKECRSYPLYKFVREELGTSLLTGEKVKSP 208
Score = 52.8 bits (109), Expect(2) = 9e-025
Identities = 19/21 (90%), Positives = 21/21 (100%)
Frame = +1 / +2
Query: 247 IDPLLECLKEWNGAPLPLC*A 309
IDPLLECLKEW+GAPLP+C*A
Sbjct: 257 IDPLLECLKEWDGAPLPIC*A 319
>gb|BI132312.1|BI132312 G134P76Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 417
Score = 80.3 bits (169), Expect(2) = 9e-025
Identities = 29/41 (70%), Positives = 36/41 (87%)
Frame = +1 / +3
Query: 73 VESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
VE+G P +PNRI+ECRSYPLY+FVREE+GT LTGE+ +SP
Sbjct: 36 VENGNPAIPNRIKECRSYPLYKFVREELGTSLLTGEKVKSP 158
Score = 52.8 bits (109), Expect(2) = 9e-025
Identities = 19/21 (90%), Positives = 21/21 (100%)
Frame = +1 / +3
Query: 247 IDPLLECLKEWNGAPLPLC*A 309
IDPLLECLKEW+GAPLP+C*A
Sbjct: 207 IDPLLECLKEWDGAPLPIC*A 269
>gb|AY372451.1| Populus balsamifera subsp. trichocarpa x Populus deltoides
phenylalanine ammonia lyase (PAL) mRNA, complete cds
Length = 2136
Score = 80.3 bits (169), Expect(2) = 3e-024
Identities = 29/41 (70%), Positives = 36/41 (87%)
Frame = +1 / +1
Query: 73 VESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
VE+G P +PNRI+ECRSYPLY+FVREE+GT LTGE+ +SP
Sbjct: 1906 VENGNPAIPNRIKECRSYPLYKFVREELGTSLLTGEKVKSP 2028
Score = 51.0 bits (105), Expect(2) = 3e-024
Identities = 18/20 (90%), Positives = 20/20 (100%)
Frame = +1 / +1
Query: 247 IDPLLECLKEWNGAPLPLC* 306
IDPLLECLKEW+GAPLP+C*
Sbjct: 2077 IDPLLECLKEWDGAPLPIC* 2136
>gb|BI128578.1|BI128578 G078P44Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 362
Score = 74.8 bits (157), Expect(2) = 7e-024
Identities = 28/41 (68%), Positives = 34/41 (82%)
Frame = +1 / +3
Query: 73 VESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
+E+G P +PNRI ECRSYPLY+FVREE+GT LTGE+ SP
Sbjct: 36 LENGNPTIPNRITECRSYPLYKFVREELGTVLLTGEKVGSP 158
Score = 55.1 bits (114), Expect(2) = 7e-024
Identities = 20/21 (95%), Positives = 21/21 (100%)
Frame = +1 / +3
Query: 247 IDPLLECLKEWNGAPLPLC*A 309
IDP+LECLKEWNGAPLPLC*A
Sbjct: 207 IDPMLECLKEWNGAPLPLC*A 269
>gb|BI120682.1|BI120682 F020P29Y Populus flower cDNA library Populus trichocarpa cDNA, mRNA
sequence
Length = 300
Score = 74.4 bits (156), Expect(2) = 8e-024
Identities = 28/41 (68%), Positives = 34/41 (82%)
Frame = +1 / +2
Query: 73 VESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
+E+G P +PNRI ECRSYPLY+FVREE+GT LTGE+ SP
Sbjct: 5 LENGNPAIPNRITECRSYPLYKFVREELGTILLTGEKVGSP 127
Score = 55.1 bits (114), Expect(2) = 8e-024
Identities = 20/21 (95%), Positives = 21/21 (100%)
Frame = +1 / +2
Query: 247 IDPLLECLKEWNGAPLPLC*A 309
IDP+LECLKEWNGAPLPLC*A
Sbjct: 176 IDPMLECLKEWNGAPLPLC*A 238
>gb|BI120888.1|BI120888 F024P64Y Populus flower cDNA library Populus trichocarpa cDNA, mRNA
sequence
Length = 320
Score = 74.4 bits (156), Expect(2) = 8e-024
Identities = 28/41 (68%), Positives = 34/41 (82%)
Frame = +1 / +2
Query: 73 VESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
+E+G P +PNRI ECRSYPLY+FVREE+GT LTGE+ SP
Sbjct: 5 LENGNPAIPNRITECRSYPLYKFVREELGTILLTGEKVGSP 127
Score = 55.1 bits (114), Expect(2) = 8e-024
Identities = 20/21 (95%), Positives = 21/21 (100%)
Frame = +1 / +2
Query: 247 IDPLLECLKEWNGAPLPLC*A 309
IDP+LECLKEWNGAPLPLC*A
Sbjct: 176 IDPMLECLKEWNGAPLPLC*A 238
>gb|BI131692.1|BI131692 G124P41Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 537
Score = 74.8 bits (157), Expect(2) = 8e-024
Identities = 28/41 (68%), Positives = 34/41 (82%)
Frame = +1 / +3
Query: 73 VESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
+E+G P +PNRI ECRSYPLY+FVREE+GT LTGE+ SP
Sbjct: 291 LENGNPAIPNRIMECRSYPLYKFVREELGTVLLTGEKVGSP 413
Score = 55.1 bits (114), Expect(2) = 8e-024
Identities = 20/21 (95%), Positives = 21/21 (100%)
Frame = +1 / +3
Query: 247 IDPLLECLKEWNGAPLPLC*A 309
IDP+LECLKEWNGAPLPLC*A
Sbjct: 462 IDPMLECLKEWNGAPLPLC*A 524
>gb|CX660019.1|CX660019 PO01017A04 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO01017A04 5', mRNA sequence
Length = 508
Score = 74.8 bits (157), Expect(2) = 8e-024
Identities = 28/41 (68%), Positives = 34/41 (82%)
Frame = +1 / +1
Query: 73 VESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
+E+G P +PNRI ECRSYPLY+FVREE+GT LTGE+ SP
Sbjct: 139 LENGNPAIPNRITECRSYPLYKFVREELGTVLLTGEKVGSP 261
Score = 55.1 bits (114), Expect(2) = 8e-024
Identities = 20/21 (95%), Positives = 21/21 (100%)
Frame = +1 / +1
Query: 247 IDPLLECLKEWNGAPLPLC*A 309
IDP+LECLKEWNGAPLPLC*A
Sbjct: 310 IDPMLECLKEWNGAPLPLC*A 372
>gb|AF480620.1| Populus tremuloides phenylalanine ammonia-lyase (PAL2) mRNA, complete
cds
Length = 2496
Score = 74.4 bits (156), Expect(2) = 1e-023
Identities = 28/41 (68%), Positives = 34/41 (82%)
Frame = +1 / +1
Query: 73 VESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
+E+G P +PNRI ECRSYPLY+FVREE+GT LTGE+ SP
Sbjct: 2104 LENGNPAIPNRITECRSYPLYKFVREELGTILLTGEKVGSP 2226
Score = 55.1 bits (114), Expect(2) = 1e-023
Identities = 20/21 (95%), Positives = 21/21 (100%)
Frame = +1 / +1
Query: 247 IDPLLECLKEWNGAPLPLC*A 309
IDP+LECLKEWNGAPLPLC*A
Sbjct: 2275 IDPMLECLKEWNGAPLPLC*A 2337
>gb|DT519436.1|DT519436 WS02441.B21_I20 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02441_I20 3', mRNA sequence
Length = 909
Score = 74.4 bits (156), Expect(2) = 1e-023
Identities = 28/41 (68%), Positives = 34/41 (82%)
Frame = +1 / -3
Query: 73 VESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
+E+G P +PNRI ECRSYPLY+FVREE+GT LTGE+ SP
Sbjct: 388 LENGNPAIPNRITECRSYPLYKFVREELGTILLTGEKVGSP 266
Score = 55.1 bits (114), Expect(2) = 1e-023
Identities = 20/21 (95%), Positives = 21/21 (100%)
Frame = +1 / -3
Query: 247 IDPLLECLKEWNGAPLPLC*A 309
IDP+LECLKEWNGAPLPLC*A
Sbjct: 217 IDPMLECLKEWNGAPLPLC*A 155
>gb|CV281497.1|CV281497 WS0182.B21_B10 PTxD-IL-N-A-9 Populus trichocarpa x Populus
deltoides cDNA clone WS0182_B10 3', mRNA sequence
Length = 849
Score = 74.4 bits (156), Expect(2) = 1e-023
Identities = 28/41 (68%), Positives = 34/41 (82%)
Frame = +1 / -3
Query: 73 VESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
+E+G P +PNRI ECRSYPLY+FVREE+GT LTGE+ SP
Sbjct: 412 LENGNPAIPNRITECRSYPLYKFVREELGTILLTGEKVGSP 290
Score = 55.1 bits (114), Expect(2) = 1e-023
Identities = 20/21 (95%), Positives = 21/21 (100%)
Frame = +1 / -3
Query: 247 IDPLLECLKEWNGAPLPLC*A 309
IDP+LECLKEWNGAPLPLC*A
Sbjct: 241 IDPMLECLKEWNGAPLPLC*A 179
>gb|CK091124.1|CK091124 F050P34.3pR Populus flower cDNA library Populus trichocarpa cDNA
clone F050P34 3', mRNA sequence
Length = 833
Score = 74.4 bits (156), Expect(2) = 1e-023
Identities = 28/41 (68%), Positives = 34/41 (82%)
Frame = +1 / -1
Query: 73 VESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
+E+G P +PNRI ECRSYPLY+FVREE+GT LTGE+ SP
Sbjct: 389 LENGNPAIPNRITECRSYPLYKFVREELGTILLTGEKVGSP 267
Score = 55.1 bits (114), Expect(2) = 1e-023
Identities = 20/21 (95%), Positives = 21/21 (100%)
Frame = +1 / -1
Query: 247 IDPLLECLKEWNGAPLPLC*A 309
IDP+LECLKEWNGAPLPLC*A
Sbjct: 218 IDPMLECLKEWNGAPLPLC*A 156
>gb|AI166713.1|AI166713 xylem.est.518 Poplar xylem Lambda ZAPII library Populus trichocarpa
cDNA 5', mRNA sequence
Length = 479
Score = 74.4 bits (156), Expect(2) = 1e-023
Identities = 28/41 (68%), Positives = 34/41 (82%)
Frame = +1 / +2
Query: 73 VESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
+E+G P +PNRI ECRSYPLY+FVREE+GT LTGE+ SP
Sbjct: 101 LENGNPAIPNRITECRSYPLYKFVREELGTILLTGEKVGSP 223
Score = 55.1 bits (114), Expect(2) = 1e-023
Identities = 20/21 (95%), Positives = 21/21 (100%)
Frame = +1 / +2
Query: 247 IDPLLECLKEWNGAPLPLC*A 309
IDP+LECLKEWNGAPLPLC*A
Sbjct: 272 IDPMLECLKEWNGAPLPLC*A 334
>gb|CV226330.1|CV226330 WS0163.B21_P08 PT-DX-A-7 Populus trichocarpa cDNA clone WS0163_P08
3', mRNA sequence
Length = 418
Score = 74.4 bits (156), Expect(2) = 1e-023
Identities = 28/41 (68%), Positives = 34/41 (82%)
Frame = +1 / +1
Query: 73 VESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
+E+G P +PNRI ECRSYPLY+FVREE+GT LTGE+ SP
Sbjct: 64 LENGNPAIPNRITECRSYPLYKFVREELGTILLTGEKVGSP 186
Score = 55.1 bits (114), Expect(2) = 1e-023
Identities = 20/21 (95%), Positives = 21/21 (100%)
Frame = +1 / +1
Query: 247 IDPLLECLKEWNGAPLPLC*A 309
IDP+LECLKEWNGAPLPLC*A
Sbjct: 235 IDPMLECLKEWNGAPLPLC*A 297
>gb|CV227422.1|CV227422 WS0167.B21_C10 PT-DX-A-7 Populus trichocarpa cDNA clone WS0167_C10
3', mRNA sequence
Length = 418
Score = 74.4 bits (156), Expect(2) = 1e-023
Identities = 28/41 (68%), Positives = 34/41 (82%)
Frame = +1 / +1
Query: 73 VESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
+E+G P +PNRI ECRSYPLY+FVREE+GT LTGE+ SP
Sbjct: 64 LENGNPAIPNRITECRSYPLYKFVREELGTILLTGEKVGSP 186
Score = 55.1 bits (114), Expect(2) = 1e-023
Identities = 20/21 (95%), Positives = 21/21 (100%)
Frame = +1 / +1
Query: 247 IDPLLECLKEWNGAPLPLC*A 309
IDP+LECLKEWNGAPLPLC*A
Sbjct: 235 IDPMLECLKEWNGAPLPLC*A 297
>gb|CV228686.1|CV228686 WS01910.B21_O18 PT-DX-N-A-10 Populus trichocarpa cDNA clone
WS01910_O18 3', mRNA sequence
Length = 418
Score = 74.4 bits (156), Expect(2) = 1e-023
Identities = 28/41 (68%), Positives = 34/41 (82%)
Frame = +1 / +1
Query: 73 VESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
+E+G P +PNRI ECRSYPLY+FVREE+GT LTGE+ SP
Sbjct: 64 LENGNPAIPNRITECRSYPLYKFVREELGTILLTGEKVGSP 186
Score = 55.1 bits (114), Expect(2) = 1e-023
Identities = 20/21 (95%), Positives = 21/21 (100%)
Frame = +1 / +1
Query: 247 IDPLLECLKEWNGAPLPLC*A 309
IDP+LECLKEWNGAPLPLC*A
Sbjct: 235 IDPMLECLKEWNGAPLPLC*A 297
>gb|CK090783.1|CK090783 F024P64.3pR Populus flower cDNA library Populus trichocarpa cDNA
clone F024P64 3', mRNA sequence
Length = 398
Score = 74.4 bits (156), Expect(2) = 1e-023
Identities = 28/41 (68%), Positives = 34/41 (82%)
Frame = +1 / -2
Query: 73 VESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
+E+G P +PNRI ECRSYPLY+FVREE+GT LTGE+ SP
Sbjct: 394 LENGNPAIPNRITECRSYPLYKFVREELGTILLTGEKVGSP 272
Score = 55.1 bits (114), Expect(2) = 1e-023
Identities = 20/21 (95%), Positives = 21/21 (100%)
Frame = +1 / -2
Query: 247 IDPLLECLKEWNGAPLPLC*A 309
IDP+LECLKEWNGAPLPLC*A
Sbjct: 223 IDPMLECLKEWNGAPLPLC*A 161
>gb|CK101143.1|CK101143 F024P64.5pR Populus flower cDNA library Populus trichocarpa cDNA
clone F024P64 5', mRNA sequence
Length = 382
Score = 74.4 bits (156), Expect(2) = 1e-023
Identities = 28/41 (68%), Positives = 34/41 (82%)
Frame = +1 / +2
Query: 73 VESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
+E+G P +PNRI ECRSYPLY+FVREE+GT LTGE+ SP
Sbjct: 5 LENGNPAIPNRITECRSYPLYKFVREELGTILLTGEKVGSP 127
Score = 55.1 bits (114), Expect(2) = 1e-023
Identities = 20/21 (95%), Positives = 21/21 (100%)
Frame = +1 / +2
Query: 247 IDPLLECLKEWNGAPLPLC*A 309
IDP+LECLKEWNGAPLPLC*A
Sbjct: 176 IDPMLECLKEWNGAPLPLC*A 238
>gb|CV283895.1|CV283895 WS0188.B21_J10 PTxD-IL-N-A-9 Populus trichocarpa x Populus
deltoides cDNA clone WS0188_J10 3', mRNA sequence
Length = 730
Score = 73.0 bits (153), Expect(2) = 3e-023
Identities = 27/41 (65%), Positives = 33/41 (80%)
Frame = +1 / -1
Query: 73 VESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
+E+G P +PNRI ECRSYPLY+FVREE+G LTGE+ SP
Sbjct: 385 IENGNPAIPNRITECRSYPLYKFVREELGAILLTGEKVGSP 263
Score = 55.1 bits (114), Expect(2) = 3e-023
Identities = 20/21 (95%), Positives = 21/21 (100%)
Frame = +1 / -1
Query: 247 IDPLLECLKEWNGAPLPLC*A 309
IDP+LECLKEWNGAPLPLC*A
Sbjct: 214 IDPMLECLKEWNGAPLPLC*A 152
>gb|CV258625.1|CV258625 WS0201.B21_B02 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS0201_B02 3', mRNA sequence
Length = 889
Score = 72.1 bits (151), Expect(2) = 5e-023
Identities = 27/41 (65%), Positives = 33/41 (80%)
Frame = +1 / -1
Query: 73 VESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
+E+G P +PNRI ECRSYPLY+FVREE+G LTGE+ SP
Sbjct: 460 LENGNPTIPNRITECRSYPLYKFVREELGAILLTGEKVGSP 338
Score = 55.1 bits (114), Expect(2) = 5e-023
Identities = 20/21 (95%), Positives = 21/21 (100%)
Frame = +1 / -1
Query: 247 IDPLLECLKEWNGAPLPLC*A 309
IDP+LECLKEWNGAPLPLC*A
Sbjct: 289 IDPMLECLKEWNGAPLPLC*A 227
>gb|CK092635.1|CK092635 G089P92.3pR Populus tension wood cDNA library Populus tremula x
Populus tremuloides cDNA clone G089P92 3', mRNA sequence
Length = 383
Score = 72.1 bits (151), Expect(2) = 6e-023
Identities = 27/39 (69%), Positives = 32/39 (82%)
Frame = +1 / -1
Query: 79 SGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
+G P +PNRI ECRSYPLY+FVREE+GT LTGE+ SP
Sbjct: 383 NGNPTIPNRITECRSYPLYKFVREELGTVLLTGEKVGSP 267
Score = 55.1 bits (114), Expect(2) = 6e-023
Identities = 20/21 (95%), Positives = 21/21 (100%)
Frame = +1 / -1
Query: 247 IDPLLECLKEWNGAPLPLC*A 309
IDP+LECLKEWNGAPLPLC*A
Sbjct: 218 IDPMLECLKEWNGAPLPLC*A 156
>gb|BU895519.1|BU895519 X025C02 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 351
Score = 71.6 bits (150), Expect(2) = 6e-023
Identities = 27/40 (67%), Positives = 33/40 (82%)
Frame = +1 / +3
Query: 73 VESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRS 192
+E+G P +PNRI ECRSYPLY+FVREE+GT LTGE+ S
Sbjct: 102 LENGNPTIPNRITECRSYPLYKFVREELGTVLLTGEKVGS 221
Score = 55.1 bits (114), Expect(2) = 6e-023
Identities = 20/21 (95%), Positives = 21/21 (100%)
Frame = +1 / +1
Query: 247 IDPLLECLKEWNGAPLPLC*A 309
IDP+LECLKEWNGAPLPLC*A
Sbjct: 274 IDPMLECLKEWNGAPLPLC*A 336
>gb|BU895655.1|BU895655 X028H12 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 544
Score = 71.2 bits (149), Expect(2) = 1e-022
Identities = 27/41 (65%), Positives = 33/41 (80%)
Frame = +1 / +2
Query: 73 VESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
+E+G P +PNRI ECRSYPLY+FV EE+GT LTGE+ SP
Sbjct: 293 LENGNPTIPNRITECRSYPLYKFVWEELGTVLLTGEKVGSP 415
Score = 55.1 bits (114), Expect(2) = 1e-022
Identities = 20/21 (95%), Positives = 21/21 (100%)
Frame = +1 / +2
Query: 247 IDPLLECLKEWNGAPLPLC*A 309
IDP+LECLKEWNGAPLPLC*A
Sbjct: 464 IDPMLECLKEWNGAPLPLC*A 526
>gb|BU895470.1|BU895470 X024E05 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 553
Score = 70.7 bits (148), Expect(2) = 1e-022
Identities = 26/37 (70%), Positives = 32/37 (86%)
Frame = +1 / +3
Query: 73 VESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGER 183
+E+G P +PNRI ECRSYPLY+FVREE+GT LTGE+
Sbjct: 228 LENGNPAIPNRIMECRSYPLYKFVREELGTVLLTGEK 338
Score = 55.1 bits (114), Expect(2) = 1e-022
Identities = 20/21 (95%), Positives = 21/21 (100%)
Frame = +1 / +3
Query: 247 IDPLLECLKEWNGAPLPLC*A 309
IDP+LECLKEWNGAPLPLC*A
Sbjct: 369 IDPMLECLKEWNGAPLPLC*A 431
>gb|BU895799.1|BU895799 X031C02 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 449
Score = 70.7 bits (148), Expect(2) = 1e-022
Identities = 27/41 (65%), Positives = 33/41 (80%)
Frame = +1 / +3
Query: 73 VESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
+E+G P +PNRI ECRSYPL +FVREE+GT LTGE+ SP
Sbjct: 198 LENGNPTIPNRITECRSYPLCKFVREELGTGLLTGEKVGSP 320
Score = 55.1 bits (114), Expect(2) = 1e-022
Identities = 20/21 (95%), Positives = 21/21 (100%)
Frame = +1 / +3
Query: 247 IDPLLECLKEWNGAPLPLC*A 309
IDP+LECLKEWNGAPLPLC*A
Sbjct: 369 IDPMLECLKEWNGAPLPLC*A 431
>gb|DT469211.1|DT469211 WS01917.C21_B16 PT-DX-N-A-10 Populus trichocarpa cDNA clone
WS01917_B16 3', mRNA sequence
Length = 382
Score = 68.9 bits (144), Expect(2) = 5e-022
Identities = 26/38 (68%), Positives = 30/38 (78%)
Frame = +1 / -2
Query: 82 GXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
G P +PNRI ECRSYPLY+FVREE+G LTGE+ SP
Sbjct: 381 GNPAIPNRITECRSYPLYKFVREELGAILLTGEKVGSP 268
Score = 55.1 bits (114), Expect(2) = 5e-022
Identities = 20/21 (95%), Positives = 21/21 (100%)
Frame = +1 / -2
Query: 247 IDPLLECLKEWNGAPLPLC*A 309
IDP+LECLKEWNGAPLPLC*A
Sbjct: 219 IDPMLECLKEWNGAPLPLC*A 157
>gb|CK319334.1|CK319334 X9P09f01 Populus stem seasonal library Populus deltoides cDNA, mRNA
sequence
Length = 664
Score = 69.3 bits (145), Expect(2) = 1e-021
Identities = 26/41 (63%), Positives = 32/41 (78%)
Frame = +1 / +3
Query: 73 VESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
+E+G P +PN I ECRSYPLY+FVREE+G LTGE+ SP
Sbjct: 297 IENGNPAIPNWITECRSYPLYKFVREELGAILLTGEKVGSP 419
Score = 53.3 bits (110), Expect(2) = 1e-021
Identities = 19/21 (90%), Positives = 21/21 (100%)
Frame = +1 / +3
Query: 247 IDPLLECLKEWNGAPLPLC*A 309
IDP+LECL+EWNGAPLPLC*A
Sbjct: 468 IDPMLECLEEWNGAPLPLC*A 530
>gb|CX658273.1|CX658273 PO01012B03 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO01012B03 5', mRNA sequence
Length = 630
Score = 73.5 bits (154), Expect(2) = 1e-021
Identities = 27/40 (67%), Positives = 34/40 (85%)
Frame = +1 / +3
Query: 76 ESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
+SG + N+I+ECRSYPLY+FVREE+GTE LTGE+ RSP
Sbjct: 264 DSGNSAIENKIKECRSYPLYKFVREELGTELLTGEKVRSP 383
Score = 49.2 bits (101), Expect(2) = 1e-021
Identities = 17/20 (85%), Positives = 19/20 (95%)
Frame = +1 / +3
Query: 247 IDPLLECLKEWNGAPLPLC* 306
IDP+LECL EWNGAPLP+C*
Sbjct: 432 IDPMLECLGEWNGAPLPIC* 491
>gb|CV283066.1|CV283066 WS0186.B21_F12 PTxD-IL-N-A-9 Populus trichocarpa x Populus
deltoides cDNA clone WS0186_F12 3', mRNA sequence
Length = 403
Score = 68.9 bits (144), Expect(3) = 2e-021
Identities = 25/40 (62%), Positives = 33/40 (82%)
Frame = +1 / -2
Query: 76 ESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
+SG + N+I+ECRSYPLY+FVREE+GT LTGE+ +SP
Sbjct: 381 DSGTSAIDNKIKECRSYPLYKFVREELGTVLLTGEKVQSP 262
Score = 47.8 bits (98), Expect(3) = 2e-021
Identities = 16/20 (80%), Positives = 19/20 (95%)
Frame = +1 / -2
Query: 247 IDPLLECLKEWNGAPLPLC* 306
IDP+LECL EWNG+PLP+C*
Sbjct: 213 IDPMLECLGEWNGSPLPIC* 154
Score = 22.6 bits (43), Expect(3) = 2e-021
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3 / -3
Query: 195 PARSSTRC 218
PARSSTRC
Sbjct: 263 PARSSTRC 240
>gb|BI138266.1|BI138266 F102P32Y Populus flower cDNA library Populus trichocarpa cDNA, mRNA
sequence
Length = 241
Score = 65.7 bits (137), Expect(3) = 2e-021
Identities = 24/38 (63%), Positives = 31/38 (81%)
Frame = +1 / +2
Query: 82 GXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
G + N+I+ECRSYPLY+FVREE+GT LTGE+ +SP
Sbjct: 2 GNSAIDNKIKECRSYPLYKFVREELGTVLLTGEKVQSP 115
Score = 48.7 bits (100), Expect(3) = 2e-021
Identities = 17/23 (73%), Positives = 20/23 (86%)
Frame = +1 / +1
Query: 247 IDPLLECLKEWNGAPLPLC*AQL 315
IDP+LECL EWNG+PLP+C* L
Sbjct: 163 IDPMLECLGEWNGSPLPIC*VLL 231
Score = 22.6 bits (43), Expect(3) = 2e-021
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3 / +3
Query: 195 PARSSTRC 218
PARSSTRC
Sbjct: 114 PARSSTRC 137
>gb|L11747.1|POPPALGA Populus x generosa tissue-type leaf phenylalanine ammonia lyase (PAL)
mRNA, complete cds
Length = 2380
Score = 68.4 bits (143), Expect(3) = 3e-021
Identities = 25/40 (62%), Positives = 33/40 (82%)
Frame = +1 / +3
Query: 76 ESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
+SG + N+I+ECRSYPLY+FVREE+GT LTGE+ +SP
Sbjct: 2025 DSGNSAIDNKIKECRSYPLYKFVREELGTVLLTGEKVQSP 2144
Score = 47.8 bits (98), Expect(3) = 3e-021
Identities = 16/20 (80%), Positives = 19/20 (95%)
Frame = +1 / +3
Query: 247 IDPLLECLKEWNGAPLPLC* 306
IDP+LECL EWNG+PLP+C*
Sbjct: 2193 IDPMLECLGEWNGSPLPIC* 2252
Score = 22.6 bits (43), Expect(3) = 3e-021
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3 / +1
Query: 195 PARSSTRC 218
PARSSTRC
Sbjct: 2143 PARSSTRC 2166
>gb|DT476995.1|DT476995 WS01231.B21_J06 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01231_J06 3', mRNA sequence
Length = 980
Score = 68.4 bits (143), Expect(3) = 3e-021
Identities = 25/40 (62%), Positives = 33/40 (82%)
Frame = +1 / -1
Query: 76 ESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
+SG + N+I+ECRSYPLY+FVREE+GT LTGE+ +SP
Sbjct: 371 DSGNSAIDNKIKECRSYPLYKFVREELGTVLLTGEKVQSP 252
Score = 47.8 bits (98), Expect(3) = 3e-021
Identities = 16/20 (80%), Positives = 19/20 (95%)
Frame = +1 / -1
Query: 247 IDPLLECLKEWNGAPLPLC* 306
IDP+LECL EWNG+PLP+C*
Sbjct: 203 IDPMLECLGEWNGSPLPIC* 144
Score = 22.6 bits (43), Expect(3) = 3e-021
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3 / -2
Query: 195 PARSSTRC 218
PARSSTRC
Sbjct: 253 PARSSTRC 230
>gb|CV267232.1|CV267232 WS02031.B21_D02 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02031_D02 3', mRNA sequence
Length = 960
Score = 68.4 bits (143), Expect(3) = 3e-021
Identities = 25/40 (62%), Positives = 33/40 (82%)
Frame = +1 / -2
Query: 76 ESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
+SG + N+I+ECRSYPLY+FVREE+GT LTGE+ +SP
Sbjct: 401 DSGNSAIDNKIKECRSYPLYKFVREELGTVLLTGEKVQSP 282
Score = 47.8 bits (98), Expect(3) = 3e-021
Identities = 16/20 (80%), Positives = 19/20 (95%)
Frame = +1 / -2
Query: 247 IDPLLECLKEWNGAPLPLC* 306
IDP+LECL EWNG+PLP+C*
Sbjct: 233 IDPMLECLGEWNGSPLPIC* 174
Score = 22.6 bits (43), Expect(3) = 3e-021
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3 / -3
Query: 195 PARSSTRC 218
PARSSTRC
Sbjct: 283 PARSSTRC 260
>gb|CV236539.1|CV236539 WS01224.B21.1_H21 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01224_H21 3', mRNA sequence
Length = 872
Score = 68.4 bits (143), Expect(3) = 3e-021
Identities = 25/40 (62%), Positives = 33/40 (82%)
Frame = +1 / -2
Query: 76 ESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
+SG + N+I+ECRSYPLY+FVREE+GT LTGE+ +SP
Sbjct: 385 DSGNSAIDNKIKECRSYPLYKFVREELGTVLLTGEKVQSP 266
Score = 47.8 bits (98), Expect(3) = 3e-021
Identities = 16/20 (80%), Positives = 19/20 (95%)
Frame = +1 / -2
Query: 247 IDPLLECLKEWNGAPLPLC* 306
IDP+LECL EWNG+PLP+C*
Sbjct: 217 IDPMLECLGEWNGSPLPIC* 158
Score = 22.6 bits (43), Expect(3) = 3e-021
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3 / -3
Query: 195 PARSSTRC 218
PARSSTRC
Sbjct: 267 PARSSTRC 244
>gb|CV268596.1|CV268596 WS0205.B21_O21 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS0205_O21 3', mRNA sequence
Length = 727
Score = 68.4 bits (143), Expect(3) = 3e-021
Identities = 25/40 (62%), Positives = 33/40 (82%)
Frame = +1 / -3
Query: 76 ESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
+SG + N+I+ECRSYPLY+FVREE+GT LTGE+ +SP
Sbjct: 401 DSGNSAIDNKIKECRSYPLYKFVREELGTVLLTGEKVQSP 282
Score = 47.8 bits (98), Expect(3) = 3e-021
Identities = 16/20 (80%), Positives = 19/20 (95%)
Frame = +1 / -3
Query: 247 IDPLLECLKEWNGAPLPLC* 306
IDP+LECL EWNG+PLP+C*
Sbjct: 233 IDPMLECLGEWNGSPLPIC* 174
Score = 22.6 bits (43), Expect(3) = 3e-021
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3 / -1
Query: 195 PARSSTRC 218
PARSSTRC
Sbjct: 283 PARSSTRC 260
>gb|DT521300.1|DT521300 WS02033.B21_O19 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02033_O19 3', mRNA sequence
Length = 649
Score = 68.4 bits (143), Expect(3) = 3e-021
Identities = 25/40 (62%), Positives = 33/40 (82%)
Frame = +1 / +3
Query: 76 ESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
+SG + N+I+ECRSYPLY+FVREE+GT LTGE+ +SP
Sbjct: 264 DSGNSAIDNKIKECRSYPLYKFVREELGTVLLTGEKVQSP 383
Score = 47.8 bits (98), Expect(3) = 3e-021
Identities = 16/20 (80%), Positives = 19/20 (95%)
Frame = +1 / +3
Query: 247 IDPLLECLKEWNGAPLPLC* 306
IDP+LECL EWNG+PLP+C*
Sbjct: 432 IDPMLECLGEWNGSPLPIC* 491
Score = 22.6 bits (43), Expect(3) = 3e-021
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3 / +1
Query: 195 PARSSTRC 218
PARSSTRC
Sbjct: 382 PARSSTRC 405
>gb|CV234789.1|CV234789 WS01216.B21_F03 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01216_F03 3', mRNA sequence
Length = 562
Score = 68.4 bits (143), Expect(3) = 3e-021
Identities = 25/40 (62%), Positives = 33/40 (82%)
Frame = +1 / -1
Query: 76 ESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
+SG + N+I+ECRSYPLY+FVREE+GT LTGE+ +SP
Sbjct: 418 DSGNSAIDNKIKECRSYPLYKFVREELGTVLLTGEKVQSP 299
Score = 47.8 bits (98), Expect(3) = 3e-021
Identities = 16/20 (80%), Positives = 19/20 (95%)
Frame = +1 / -1
Query: 247 IDPLLECLKEWNGAPLPLC* 306
IDP+LECL EWNG+PLP+C*
Sbjct: 250 IDPMLECLGEWNGSPLPIC* 191
Score = 22.6 bits (43), Expect(3) = 3e-021
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3 / -2
Query: 195 PARSSTRC 218
PARSSTRC
Sbjct: 300 PARSSTRC 277
>gb|BI129170.1|BI129170 G086P80Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 518
Score = 68.4 bits (143), Expect(3) = 3e-021
Identities = 25/40 (62%), Positives = 33/40 (82%)
Frame = +1 / +2
Query: 76 ESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
+SG + N+I+ECRSYPLY+FVREE+GT LTGE+ +SP
Sbjct: 155 DSGNSAIDNKIKECRSYPLYKFVREELGTVLLTGEKVQSP 274
Score = 47.8 bits (98), Expect(3) = 3e-021
Identities = 16/20 (80%), Positives = 19/20 (95%)
Frame = +1 / +2
Query: 247 IDPLLECLKEWNGAPLPLC* 306
IDP+LECL EWNG+PLP+C*
Sbjct: 323 IDPMLECLGEWNGSPLPIC* 382
Score = 22.6 bits (43), Expect(3) = 3e-021
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3 / +3
Query: 195 PARSSTRC 218
PARSSTRC
Sbjct: 273 PARSSTRC 296
>gb|CV263001.1|CV263001 WS02020.B21_B08 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02020_B08 3', mRNA sequence
Length = 500
Score = 68.4 bits (143), Expect(3) = 3e-021
Identities = 25/40 (62%), Positives = 33/40 (82%)
Frame = +1 / -1
Query: 76 ESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
+SG + N+I+ECRSYPLY+FVREE+GT LTGE+ +SP
Sbjct: 401 DSGNSAIDNKIKECRSYPLYKFVREELGTVLLTGEKVQSP 282
Score = 47.8 bits (98), Expect(3) = 3e-021
Identities = 16/20 (80%), Positives = 19/20 (95%)
Frame = +1 / -1
Query: 247 IDPLLECLKEWNGAPLPLC* 306
IDP+LECL EWNG+PLP+C*
Sbjct: 233 IDPMLECLGEWNGSPLPIC* 174
Score = 22.6 bits (43), Expect(3) = 3e-021
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3 / -2
Query: 195 PARSSTRC 218
PARSSTRC
Sbjct: 283 PARSSTRC 260
>gb|CF227310.1|CF227310 PtaD2B11B1103 Poplar cDNA library from wood tissues Populus alba x
Populus tremula cDNA 5', mRNA sequence
Length = 476
Score = 68.4 bits (143), Expect(3) = 3e-021
Identities = 25/40 (62%), Positives = 33/40 (82%)
Frame = +1 / +1
Query: 76 ESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
+SG + N+I+ECRSYPLY+FVREE+GT LTGE+ +SP
Sbjct: 73 DSGNSXIDNKIKECRSYPLYKFVREELGTVLLTGEKVQSP 192
Score = 47.8 bits (98), Expect(3) = 3e-021
Identities = 16/20 (80%), Positives = 19/20 (95%)
Frame = +1 / +1
Query: 247 IDPLLECLKEWNGAPLPLC* 306
IDP+LECL EWNG+PLP+C*
Sbjct: 241 IDPMLECLGEWNGSPLPIC* 300
Score = 22.6 bits (43), Expect(3) = 3e-021
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3 / +2
Query: 195 PARSSTRC 218
PARSSTRC
Sbjct: 191 PARSSTRC 214
Database: Populus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:49 PM
Number of letters in database: 203,408,664
Number of sequences in database: 369,679
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 275,648,614
Number of Sequences: 369679
Number of extensions: 3626484
Number of successful extensions: 43722
Number of sequences better than 1.0e-020: 56
length of database: 67,802,888
effective HSP length: 51
effective length of database: 48,949,259
effective search space used: 7880830699
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)