TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 7297169.2.1
(545 letters)
Database: Populus_nucl_with_EST.fasta
369,679 sequences; 203,408,664 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|DN498444.1|DN498444 S027H11.5pR Populus imbibed seed cDN... 336 7e-092
gb|CF119245.1|CF119245 MTU10CS.P15.D01 Aspen stem cDNA Libr... 232 1e-073
gb|CN524145.1|CN524145 GQ015M12.T3_B06 GQ015 Populus tricho... 229 2e-068
emb|AJ457185.2|PEU457185 Populus euramericana mRNA for puta... 234 2e-067
gb|BU882011.1|BU882011 UM70TE01 Populus flower cDNA library... 236 6e-067
gb|CK090736.1|CK090736 F022P18.3pR Populus flower cDNA libr... 222 3e-066
gb|CF119703.1|CF119703 MTU10CS.P5.C08 Aspen stem cDNA Libra... 195 1e-062
gb|DT500719.1|DT500719 PX0019.BR.1_N12 PT-X-FL-A-1 Populus ... 192 2e-062
gb|DN501193.1|DN501193 UM70TE01.5pR Populus female catkins ... 236 1e-061
gb|BU895782.1|BU895782 X030H11 Populus wood cDNA library Po... 201 3e-061
gb|CV227089.1|CV227089 WS0166.B21_C20 PT-DX-A-7 Populus tri... 216 9e-058
gb|CV227798.1|CV227798 WS0168.B21_D21 PT-DX-A-7 Populus tri... 216 9e-058
gb|BU892787.1|BU892787 P069E06 Populus petioles cDNA librar... 222 1e-057
gb|AJ775835.1|AJ775835 AJ775835 Populus euphratica root 3-6... 179 1e-056
gb|DV466577.1|DV466577 MTUNUL1.P7.E02 NUL Populus fremontii... 216 8e-056
gb|DT509213.1|DT509213 WS02423.BR_B23 PTxD-ICC-N-A-14 Popul... 215 2e-055
gb|DV465235.1|DV465235 MTUNUL1.P36.H11 NUL Populus fremonti... 215 2e-055
gb|AJ777023.1|AJ777023 AJ777023 Populus euphratica root 3-6... 188 5e-055
gb|CF234937.1|CF234937 PtaJXT0016H6H0616 Poplar cDNA librar... 210 5e-054
gb|CA931088.1|CA931088 MTU2TA.P1.H03 Aspen apex cDNA Librar... 210 7e-054
gb|CA931785.1|CA931785 MTU4TA.P22.H08 Aspen apex cDNA Libra... 210 7e-054
gb|CA931535.1|CA931535 MTU2TA.P8.F10 Aspen apex cDNA Librar... 209 1e-053
gb|BU812249.1|BU812249 UL94TA04 Populus leaf cDNA library P... 207 3e-053
gb|BU883192.1|BU883192 UM87TD10 Populus flower cDNA library... 176 8e-052
gb|BU814694.1|BU814694 N031H09 Populus bark cDNA library Po... 181 3e-051
gb|CA934790.1|CA934790 MTU5TS.P23.H02 Aspen stem cDNA Libra... 199 1e-050
gb|BU892669.1|BU892669 P066H06 Populus petioles cDNA librar... 172 2e-048
gb|CA928981.1|CA928981 MTU6TR.P9.B03 Aspen root cDNA Librar... 161 3e-046
gb|CA928847.1|CA928847 MTU6TR.P7.E10 Aspen root cDNA Librar... 161 3e-046
gb|AI163117.1|AI163117 A033P65U Hybrid aspen plasmid librar... 183 6e-046
gb|CK106405.1|CK106405 UB19CPH06.5pR Populus active cambium... 155 3e-045
gb|CF232498.1|CF232498 PtaJXO0011C12C1206 Poplar cDNA libra... 120 3e-043
gb|AJ774151.1|AJ774151 AJ774151 Populus euphratica shoot 3-... 155 3e-043
gb|CV253010.1|CV253010 PX0019.B21.1_N12 PT-X-FL-A-1 Populus... 174 3e-043
gb|CX659031.1|CX659031 PO01025F07 Poplar SC cDNA library Po... 119 8e-043
gb|BU896669.1|BU896669 X044A03 Populus wood cDNA library Po... 172 2e-042
gb|BU897532.1|BU897532 X059C02 Populus wood cDNA library Po... 172 2e-042
gb|DN496270.1|DN496270 P052C04.5pR Populus petioles cDNA li... 157 1e-041
gb|DT481857.1|DT481857 WS02533.BR_C12 PT-MB-N-A-15 Populus ... 109 1e-040
gb|AJ776226.1|AJ776226 AJ776226 Populus euphratica root 3-6... 122 2e-040
gb|CX172775.1|CX172775 G02_69-61_14.ab1 leaf inoculated wit... 123 8e-040
gb|CA929195.1|CA929195 MTU2CA.P10.C04 Aspen apex cDNA Libra... 157 5e-038
gb|BU821162.1|BU821162 UB19CPH06 Populus tremula cambium cD... 155 1e-037
gb|CK103636.1|CK103636 G124P92.5pR Populus tension wood cDN... 95 2e-036
gb|BI131738.1|BI131738 G124P92Y Populus cambium cDNA librar... 95 3e-036
gb|CK116749.1|CK116749 B016P65 Hybrid aspen plasmid library... 141 3e-036
gb|DV464839.1|DV464839 MTUNUL1.P31.D11 NUL Populus fremonti... 91 6e-035
gb|BU829210.1|BU829210 K036P64P Populus apical shoot cDNA l... 146 1e-034
gb|CV260290.1|CV260290 WS02013.B21_K19 PTxN-IB-N-A-11 Popul... 120 1e-033
gb|CN518865.1|CN518865 GQ0101.B3_M23 GQ010 Populus trichoca... 120 1e-033
gb|CK096587.1|CK096587 UB19CPH06.3pR Populus active cambium... 104 2e-033
gb|BI128478.1|BI128478 G076P41Y Populus cambium cDNA librar... 141 3e-033
gb|BU821658.1|BU821658 UB26CPB05 Populus tremula cambium cD... 125 4e-033
gb|CF233814.1|CF233814 PtaJXO0027H7H0715 Poplar cDNA librar... 82 6e-032
gb|AJ777252.1|AJ777252 AJ777252 Populus euphratica root 3-6... 137 6e-032
gb|CF119366.1|CF119366 MTU10CS.P16.H08 Aspen stem cDNA Libr... 136 8e-032
gb|BU812820.1|BU812820 N001G10 Populus bark cDNA library Po... 102 1e-031
gb|CF119616.1|CF119616 MTU10CS.P4.B08 Aspen stem cDNA Libra... 133 7e-031
gb|DT503028.1|DT503028 WS0135.BR_C17 PTxD-IL-FL-A-4 Populus... 132 1e-030
gb|CA934657.1|CA934657 MTU5TS.P21.H12 Aspen stem cDNA Libra... 131 3e-030
gb|CV280172.1|CV280172 WS0135.B21_C17 PTxD-IL-FL-A-4 Populu... 130 7e-030
gb|DN500076.1|DN500076 UB13CPA04.5pR Populus active cambium... 130 7e-030
gb|BU884899.1|BU884899 R017E03 Populus root cDNA library Po... 130 9e-030
gb|BU821554.1|BU821554 UB24CPG04 Populus tremula cambium cD... 70 1e-029
gb|DV465615.1|DV465615 MTUNUL1.P40.H05 NUL Populus fremonti... 96 3e-029
gb|BP926348.1|BP926348 BP926348 full-length enriched poplar... 93 3e-029
gb|CF234540.1|CF234540 PtaJXT0012A9A0901 Poplar cDNA librar... 74 5e-029
gb|CF119032.1|CF119032 MTU10CS.P12.F03 Aspen stem cDNA Libr... 86 8e-029
gb|CF119298.1|CF119298 MTU10CS.P16.A06 Aspen stem cDNA Libr... 86 8e-029
gb|AC149431.1| Populus trichocarpa clone Pop1-124P06, compl... 82 9e-029
gb|BU890414.1|BU890414 P036D11 Populus petioles cDNA librar... 125 2e-028
gb|CF119642.1|CF119642 MTU10CS.P4.E03 Aspen stem cDNA Libra... 125 2e-028
gb|CF120022.1|CF120022 MTU10CS.P9.C10 Aspen stem cDNA Libra... 84 3e-028
gb|CF120073.1|CF120073 MTU10CS.P9.H11 Aspen stem cDNA Libra... 84 3e-028
gb|CK096738.1|CK096738 UB24CPG04.3pR Populus active cambium... 77 4e-028
gb|DT523322.1|DT523322 WS02039.B21_G08 PTxN-IB-N-A-11 Popul... 123 8e-028
gb|DT525942.1|DT525942 WS02046.C21_L06 PTxN-IB-N-A-11 Popul... 123 8e-028
gb|AI164701.1|AI164701 A067P37U Hybrid aspen plasmid librar... 123 1e-027
gb|BU818719.1|BU818719 UA33CPG11 Populus tremula cambium cD... 80 1e-027
gb|CF119922.1|CF119922 MTU10CS.P8.A08 Aspen stem cDNA Libra... 83 2e-027
gb|DV464422.1|DV464422 MTUNUL1.P27.C10 NUL Populus fremonti... 115 4e-027
gb|CK109419.1|CK109419 N016D12 Populus bark cDNA library Po... 120 7e-027
gb|CK099428.1|CK099428 A067P37.5pR Hybrid aspen plasmid lib... 90 1e-023
gb|DT518108.1|DT518108 WS02436.B21_D13 PTxD-ICC-N-A-14 Popu... 109 1e-023
gb|CV263704.1|CV263704 WS02022.B21_J02 PTxN-IB-N-A-11 Popul... 86 3e-023
gb|CV257958.1|CV257958 WS0248.B21_C03 PTxD-ICC-N-A-14 Popul... 101 5e-023
gb|CA826352.1|CA826352 R76H04 two-month-old roots from clon... 68 5e-023
gb|CK098806.1|CK098806 A033P65.5pR Hybrid aspen plasmid lib... 47 7e-023
gb|CF232827.1|CF232827 PtaJXO0016C7C0705 Poplar cDNA librar... 71 2e-021
gb|DT490811.1|DT490811 WS02546.C21.1_A09 PT-MB-N-A-15 Popul... 101 3e-021
>gb|DN498444.1|DN498444 S027H11.5pR Populus imbibed seed cDNA library Populus tremula cDNA
clone S027H11 5', mRNA sequence
Length = 814
Score = 336 bits (732), Expect = 7e-092
Identities = 138/177 (77%), Positives = 157/177 (88%)
Frame = +1 / +1
Query: 1 HLVPATMVGQKFGDKIRYYVQTDPSPTATIVFRGTVIGKSPSAPRVAAFSSRGPNYRAPE 180
HL+PAT VG+ +KI Y++++ SPTATI+FRGT+IG SP+APRVAAFSSRGPNY PE
Sbjct: 55 HLLPATEVGEIAANKIIQYIKSEQSPTATILFRGTIIGTSPAAPRVAAFSSRGPNYLTPE 234
Query: 181 ILKPDVIAPGVNILAAWTGAASPTDLDIDSRRVEFNIISGTSMSCPHVSGLAALLRQAHP 360
ILKPDVIAPGVNILA WTG PTDL+ID RRVEFNIISGTSMSCPHVSG+AALLR+A+P
Sbjct: 235 ILKPDVIAPGVNILAGWTGFVGPTDLEIDPRRVEFNIISGTSMSCPHVSGIAALLRKAYP 414
Query: 361 EWSPAAIKSALMTTAYNLDNSGETIKDLATGVESTPFVRGAGHVDPNAALDPRLVYD 531
+WSPAAIKSAL+TTAYNLDNSG+ IKDLA+G ESTPF+ GAGHVDPN ALDP LVYD
Sbjct: 415 DWSPAAIKSALVTTAYNLDNSGKNIKDLASGEESTPFIHGAGHVDPNRALDPGLVYD 585
Score = 230 bits (500), Expect = 2e-060
Identities = 112/176 (63%), Positives = 130/176 (73%)
Frame = -1 / -3
Query: 530 SYTSLGSRAALGST*PAPRTNGVDSTPVARSLMVSPELSRLYAVVMSADLIAAGLHSGCA 351
SYTS GSRA LGST*PAP GVDS+P+ARSL+ PELS+L AVV AD IAAG SG A
Sbjct: 584 SYTSPGSRALLGST*PAP*MKGVDSSPLARSLIFLPELSKL*AVVTKADFIAAGDQSGYA 405
Query: 350 WRSSAARPLTCGQDMDVPEMMLNSTRLESMSRSVGEAAPVHAASMLTPGAMTSGLRISGA 171
+RS AA PLT GQD++VP++MLNST L S+S+SVG PV A MLTPGA+TSG RISG
Sbjct: 404 FRSKAAIPLT*GQDIEVPDIMLNSTLLGSISKSVGPTNPVQPAKMLTPGAITSGFRISGV 225
Query: 170 R*LGPRLENAATRGADGDLPMTVPRNTMVAVGDGSVWT*YLILSPNFCPTIVAGTR 3
+* GPRLE AAT GA G++P+ VPRN +VAVGD S +IL PT VAG R
Sbjct: 224 K*FGPRLEKAATLGAAGEVPIIVPRNRIVAVGDCSDLIYCIILLAAISPTSVAGRR 57
>gb|CF119245.1|CF119245 MTU10CS.P15.D01 Aspen stem cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 816
Score = 232 bits (503), Expect(2) = 1e-073
Identities = 97/139 (69%), Positives = 113/139 (81%)
Frame = +1 / +3
Query: 127 APRVAAFSSRGPNYRAPEILKPDVIAPGVNILAAWTGAASPTDLDIDSRRVEFNIISGTS 306
+P VAAFSSRGPN P+ILKPD+IAPGVNILA W G+ PT L D RRVEFNIISGTS
Sbjct: 267 SPVVAAFSSRGPNSITPDILKPDMIAPGVNILAGWVGSVGPTGLATDGRRVEFNIISGTS 446
Query: 307 MSCPHVSGLAALLRQAHPEWSPAAIKSALMTTAYNLDNSGETIKDLATGVESTPFVRGAG 486
MSCPHVSGLAAL++ AHP+WSPAAIKSALMTTAY +G+ ++D+ATG +S PF GAG
Sbjct: 447 MSCPHVSGLAALIKAAHPDWSPAAIKSALMTTAYVTYKNGKKLQDVATGKDSMPFDHGAG 626
Query: 487 HVDPNAALDPRLVYDAGSD 543
HVDP +AL+P LVYD +D
Sbjct: 627 HVDPVSALNPGLVYDLTAD 683
Score = 156 bits (338), Expect(2) = 7e-046
Identities = 81/139 (58%), Positives = 93/139 (66%)
Frame = -1 / -3
Query: 545 SSEPASYTSLGSRAALGST*PAPRTNGVDSTPVARSLMVSPELSRLYAVVMSADLIAAGL 366
SS S TS G A GST PAP +NG++S PVA S P L AVV+SADLIAAGL
Sbjct: 685 SSAVRS*TSPGLSAETGSTWPAP*SNGIESFPVATSCNFLPFL*VT*AVVISADLIAAGL 506
Query: 365 HSGCAWRSSAARPLTCGQDMDVPEMMLNSTRLESMSRSVGEAAPVHAASMLTPGAMTSGL 186
SG A +AARPLTCGQD++VPEMMLNSTRL S++ VG P A MLTPGA+ SG
Sbjct: 505 QSG*AALINAARPLTCGQDIEVPEMMLNSTRLPSVASPVGPTEPTQPAKMLTPGAIMSGF 326
Query: 185 RISGAR*LGPRLENAATRG 129
++SG LGP NAAT G
Sbjct: 325 KMSGVIELGPLELNAATTG 269
Score = 64.4 bits (135), Expect(2) = 1e-073
Identities = 26/42 (61%), Positives = 32/42 (76%)
Frame = +1 / +3
Query: 1 HLVPATMVGQKFGDKIRYYVQTDPSPTATIVFRGTVIGKSPS 126
HL+PAT VGQK GD+I+ Y+ +DP PTATI F GT +G PS
Sbjct: 144 HLLPATAVGQKGGDEIKNYLFSDPKPTATIHFEGTKVGIQPS 269
Score = 45.7 bits (94), Expect(2) = 7e-046
Identities = 25/50 (50%), Positives = 30/50 (60%)
Frame = -1 / -3
Query: 152 LENAATRGADGDLPMTVPRNTMVAVGDGSVWT*YLILSPNFCPTIVAGTR 3
LE A DG +P VP +VAVG GS *+LI SP F PT VAG++
Sbjct: 295 LELNAATTGDG*IPTLVPSK*IVAVGFGSENK*FLISSPPF*PTAVAGSK 146
>gb|CN524145.1|CN524145 GQ015M12.T3_B06 GQ015 Populus trichocarpa x Populus deltoides cDNA
clone GQ015M12_B06 5', mRNA sequence
Length = 824
Score = 229 bits (497), Expect(2) = 2e-068
Identities = 99/139 (71%), Positives = 109/139 (78%)
Frame = +1 / +1
Query: 127 APRVAAFSSRGPNYRAPEILKPDVIAPGVNILAAWTGAASPTDLDIDSRRVEFNIISGTS 306
+P +AAFSSRGPN PE+LKPD+IAPGVNILA WTGA PT L D R V FNIISGTS
Sbjct: 334 SPVLAAFSSRGPNLVTPEVLKPDLIAPGVNILAGWTGAVGPTGLTSDKRHVSFNIISGTS 513
Query: 307 MSCPHVSGLAALLRQAHPEWSPAAIKSALMTTAYNLDNSGETIKDLATGVESTPFVRGAG 486
MSCPHVSGLAAL++ AH +WSPAAIKSALMTTAY +GE I D+ATG STPF GA
Sbjct: 514 MSCPHVSGLAALVKAAHQDWSPAAIKSALMTTAYATYKNGENILDVATGQPSTPFDFGAX 693
Query: 487 HVDPNAALDPRLVYDAGSD 543
HV+P AALDP LVYDA D
Sbjct: 694 HVNPVAALDPGLVYDASVD 750
Score = 147 bits (317), Expect(2) = 1e-042
Identities = 80/139 (57%), Positives = 88/139 (63%)
Frame = -1 / -1
Query: 545 SSEPASYTSLGSRAALGST*PAPRTNGVDSTPVARSLMVSPELSRLYAVVMSADLIAAGL 366
SS AS T GSRAA G T AP++NGVD PVA S M SP L AVVM ADL+AAGL
Sbjct: 752 SSTEAS*TRPGSRAATGFTCXAPKSNGVDGCPVATSNMFSPFLYVA*AVVMRADLMAAGL 573
Query: 365 HSGCAWRSSAARPLTCGQDMDVPEMMLNSTRLESMSRSVGEAAPVHAASMLTPGAMTSGL 186
S A +SAA PLT G D+DVPEM+L T L S+ VG APVH A MLTPGA+ SGL
Sbjct: 572 QSW*AALTSAANPLT*GHDIDVPEMILKLTCLLSLVSPVGPTAPVHPARMLTPGAIRSGL 393
Query: 185 RISGAR*LGPRLENAATRG 129
SG GP NAA G
Sbjct: 392 STSGVTRFGPLELNAANTG 336
Score = 49.8 bits (103), Expect(2) = 2e-068
Identities = 20/42 (47%), Positives = 26/42 (61%)
Frame = +1 / +1
Query: 1 HLVPATMVGQKFGDKIRYYVQTDPSPTATIVFRGTVIGKSPS 126
HL+P + VGQ+ D I+ Y +DP P ATI GT +G PS
Sbjct: 211 HLLPTSTVGQRTADAIKNYAFSDPKPMATIASGGTKLGVEPS 336
Score = 44.8 bits (92), Expect(2) = 1e-042
Identities = 22/50 (44%), Positives = 26/50 (52%)
Frame = -1 / -1
Query: 152 LENAATRGADGDLPMTVPRNTMVAVGDGSVWT*YLILSPNFCPTIVAGTR 3
LE A DG P VP +VA+G GS *+LI S CPT+ G R
Sbjct: 362 LELNAANTGDGSTPSFVPPEAIVAIGFGSEKA*FLIASAVLCPTVDVGRR 213
>emb|AJ457185.2|PEU457185 Populus euramericana mRNA for putative serine protease (sp gene)
Length = 2152
Score = 234 bits (508), Expect(2) = 2e-067
Identities = 101/139 (72%), Positives = 111/139 (79%)
Frame = +1 / +3
Query: 127 APRVAAFSSRGPNYRAPEILKPDVIAPGVNILAAWTGAASPTDLDIDSRRVEFNIISGTS 306
+P VAAFSSRGPN PE+LKPD+IAPGVNILA WTG A PT L D R VEFNIISGTS
Sbjct: 1017 SPVVAAFSSRGPNLVTPEVLKPDLIAPGVNILAGWTGGAGPTGLTNDKRHVEFNIISGTS 1196
Query: 307 MSCPHVSGLAALLRQAHPEWSPAAIKSALMTTAYNLDNSGETIKDLATGVESTPFVRGAG 486
MSCPHVSGLAAL++ AH +WSPAAIKSALMTTAY +GE + D+ATG STPF GAG
Sbjct: 1197 MSCPHVSGLAALIKAAHQDWSPAAIKSALMTTAYATYKNGEDLLDVATGQPSTPFDYGAG 1376
Query: 487 HVDPNAALDPRLVYDAGSD 543
HV+P AALDP LVYDA D
Sbjct: 1377 HVNPVAALDPGLVYDATVD 1433
Score = 153 bits (331), Expect = 4e-037
Identities = 84/139 (60%), Positives = 89/139 (64%)
Frame = -1 / -1
Query: 545 SSEPASYTSLGSRAALGST*PAPRTNGVDSTPVARSLMVSPELSRLYAVVMSADLIAAGL 366
SS AS T GSRAA G T PAP +NGVD PVA S SP L AVVM ADL+AAGL
Sbjct: 1435 SSTVAS*TRPGSRAATGFTCPAP*SNGVDGCPVATSNKSSPFLYVA*AVVMRADLMAAGL 1256
Query: 365 HSGCAWRSSAARPLTCGQDMDVPEMMLNSTRLESMSRSVGEAAPVHAASMLTPGAMTSGL 186
S A SAA PLT G D+DVPEM+LNST L S VG A PVH ASMLTPGA+ SGL
Sbjct: 1255 QSW*AALMSAANPLTWGHDIDVPEMILNSTCLLSFVSPVGPAPPVHPASMLTPGAIRSGL 1076
Query: 185 RISGAR*LGPRLENAATRG 129
SG GP NAAT G
Sbjct: 1075 STSGVTRFGPLELNAATTG 1019
Score = 41.2 bits (84), Expect(2) = 2e-067
Identities = 17/42 (40%), Positives = 22/42 (52%)
Frame = +1 / +3
Query: 1 HLVPATMVGQKFGDKIRYYVQTDPSPTATIVFRGTVIGKSPS 126
HL+P VG + + I+ Y DP P TI GT +G PS
Sbjct: 894 HLLPTAAVGLRTANAIKNYAFLDPKPMGTIASGGTKLGVEPS 1019
>gb|BU882011.1|BU882011 UM70TE01 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 553
Score = 236 bits (512), Expect(2) = 6e-067
Identities = 99/139 (71%), Positives = 114/139 (82%)
Frame = +1 / +2
Query: 127 APRVAAFSSRGPNYRAPEILKPDVIAPGVNILAAWTGAASPTDLDIDSRRVEFNIISGTS 306
+P VAAFSSRGPN P+ILKPD+IAPGVNILA W G+A PT L D RRVEFNIISGTS
Sbjct: 74 SPVVAAFSSRGPNSITPDILKPDMIAPGVNILAGWVGSAGPTGLATDGRRVEFNIISGTS 253
Query: 307 MSCPHVSGLAALLRQAHPEWSPAAIKSALMTTAYNLDNSGETIKDLATGVESTPFVRGAG 486
MSCPHVSGLAAL++ AHP+WSPAAIKSALMTTAY +G ++D+ATG +STPF GAG
Sbjct: 254 MSCPHVSGLAALIKAAHPDWSPAAIKSALMTTAYVTYKNGNKLQDVATGKDSTPFDHGAG 433
Query: 487 HVDPNAALDPRLVYDAGSD 543
HVDP +AL+P LVYD +D
Sbjct: 434 HVDPVSALNPGLVYDLTAD 490
Score = 158 bits (341), Expect = 2e-038
Identities = 82/139 (58%), Positives = 94/139 (67%)
Frame = -1 / -2
Query: 545 SSEPASYTSLGSRAALGST*PAPRTNGVDSTPVARSLMVSPELSRLYAVVMSADLIAAGL 366
SS S TS G A GST PAP +NGV+S PVA S + P L AVV+SADLIAAGL
Sbjct: 492 SSAVRS*TSPGLSAETGSTCPAP*SNGVESFPVATSCNLLPFL*VT*AVVISADLIAAGL 313
Query: 365 HSGCAWRSSAARPLTCGQDMDVPEMMLNSTRLESMSRSVGEAAPVHAASMLTPGAMTSGL 186
SG A +AARPLTCGQD++VPEMMLNSTRL S++ VG A P A MLTPGA+ SG
Sbjct: 312 QSG*AALINAARPLTCGQDIEVPEMMLNSTRLPSVASPVGPAEPTQPAKMLTPGAIMSGF 133
Query: 185 RISGAR*LGPRLENAATRG 129
++SG GP NAAT G
Sbjct: 132 KMSGVIEFGPLELNAATTG 76
Score = 38.0 bits (77), Expect(2) = 6e-067
Identities = 14/24 (58%), Positives = 18/24 (75%)
Frame = +1 / +2
Query: 55 YVQTDPSPTATIVFRGTVIGKSPS 126
Y+ +DP PTATI+F GT +G PS
Sbjct: 5 YLFSDPKPTATILFEGTKVGIQPS 76
>gb|CK090736.1|CK090736 F022P18.3pR Populus flower cDNA library Populus trichocarpa cDNA
clone F022P18 3', mRNA sequence
Length = 783
Score = 222 bits (481), Expect(2) = 3e-066
Identities = 92/135 (68%), Positives = 106/135 (78%)
Frame = +1 / +3
Query: 127 APRVAAFSSRGPNYRAPEILKPDVIAPGVNILAAWTGAASPTDLDIDSRRVEFNIISGTS 306
+P VAAFSSRGPN EILKPD++APGVNILAAWTG P+ L D RRV+FNI+SGTS
Sbjct: 216 SPVVAAFSSRGPNLLTLEILKPDIVAPGVNILAAWTGDLGPSSLPTDHRRVKFNILSGTS 395
Query: 307 MSCPHVSGLAALLRQAHPEWSPAAIKSALMTTAYNLDNSGETIKDLATGVESTPFVRGAG 486
MSCPHVSG+AALL+ HPEWSPAAIKSALMTTAY DN+ +KD +T STPF GAG
Sbjct: 396 MSCPHVSGIAALLKARHPEWSPAAIKSALMTTAYVHDNTHHPMKDASTATPSTPFDHGAG 575
Query: 487 HVDPNAALDPRLVYD 531
H++P A DP L+YD
Sbjct: 576 HINPMKAQDPGLIYD 620
Score = 137 bits (295), Expect(2) = 4e-038
Identities = 72/129 (55%), Positives = 81/129 (62%)
Frame = -1 / -3
Query: 515 GSRAALGST*PAPRTNGVDSTPVARSLMVSPELSRLYAVVMSADLIAAGLHSGCAWRSSA 336
GS A +G PAP + GV+ V S + LS AVV+SADLIAAGLHSGC S A
Sbjct: 604 GS*AFIGFMCPAP*SKGVEGVAVEASFIGWCVLS*T*AVVISADLIAAGLHSGCLALSKA 425
Query: 335 ARPLTCGQDMDVPEMMLNSTRLESMSRSVGEAAPVHAASMLTPGAMTSGLRISGAR*LGP 156
A PLTCG DM+VPE MLN T L S+ + G +PV AASM TPGA SG RIS GP
Sbjct: 424 AIPLTCGHDMEVPESMLNFTLL*SVGKLDGPKSPVQAASMFTPGATISGFRISRVSKFGP 245
Query: 155 RLENAATRG 129
ENAAT G
Sbjct: 244 LDENAATTG 218
Score = 49.8 bits (103), Expect(2) = 3e-066
Identities = 21/42 (50%), Positives = 27/42 (64%)
Frame = +1 / +3
Query: 1 HLVPATMVGQKFGDKIRYYVQTDPSPTATIVFRGTVIGKSPS 126
HL+PA VG+K G I+ Y T + TAT+ FRGT +G PS
Sbjct: 93 HLLPAVAVGEKEGKLIKSYALTSRNATATLAFRGTSLGIRPS 218
Score = 39.4 bits (80), Expect(2) = 4e-038
Identities = 21/50 (42%), Positives = 26/50 (52%)
Frame = -1 / -3
Query: 152 LENAATRGADGDLPMTVPRNTMVAVGDGSVWT*YLILSPNFCPTIVAGTR 3
L+ A +G +P VPR VAV V * LI P+F PT AG+R
Sbjct: 244 LDENAATTGEGLIPKLVPRKARVAVAFRLVKA*LLINFPSFSPTATAGSR 95
>gb|CF119703.1|CF119703 MTU10CS.P5.C08 Aspen stem cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 616
Score = 195 bits (422), Expect(2) = 1e-062
Identities = 81/115 (70%), Positives = 94/115 (81%)
Frame = +1 / +3
Query: 127 APRVAAFSSRGPNYRAPEILKPDVIAPGVNILAAWTGAASPTDLDIDSRRVEFNIISGTS 306
+P VAAFSSRGPN P+ILKPD+IAPGVNILA W G+ PT L D RRVEFNIISGTS
Sbjct: 267 SPVVAAFSSRGPNSITPDILKPDMIAPGVNILAGWVGSVGPTGLATDGRRVEFNIISGTS 446
Query: 307 MSCPHVSGLAALLRQAHPEWSPAAIKSALMTTAYNLDNSGETIKDLATGVESTPF 471
MSCPHVSGLAAL++ AHP+WSPAAI SALMTTAY +G+ ++D+ATG +S PF
Sbjct: 447 MSCPHVSGLAALIKAAHPDWSPAAIXSALMTTAYVTYKNGKKLQDVATGKDSMPF 611
Score = 136 bits (293), Expect(2) = 1e-039
Identities = 67/115 (58%), Positives = 79/115 (68%)
Frame = -1 / -1
Query: 473 TNGVDSTPVARSLMVSPELSRLYAVVMSADLIAAGLHSGCAWRSSAARPLTCGQDMDVPE 294
+NG++S PVA S P L AVV+SAD IAAGL SG A +AARPLTCGQD++VPE
Sbjct: 613 SNGIESFPVATSCNFLPFL*VT*AVVISADXIAAGLQSG*AALINAARPLTCGQDIEVPE 434
Query: 293 MMLNSTRLESMSRSVGEAAPVHAASMLTPGAMTSGLRISGAR*LGPRLENAATRG 129
MMLNSTRL S++ VG P A MLTPGA+ SG ++SG LGP NAAT G
Sbjct: 433 MMLNSTRLPSVASPVGPTEPTQPAKMLTPGAIMSGFKMSGVIELGPLELNAATTG 269
Score = 64.4 bits (135), Expect(2) = 1e-062
Identities = 26/42 (61%), Positives = 32/42 (76%)
Frame = +1 / +3
Query: 1 HLVPATMVGQKFGDKIRYYVQTDPSPTATIVFRGTVIGKSPS 126
HL+PAT VGQK GD+I+ Y+ +DP PTATI F GT +G PS
Sbjct: 144 HLLPATAVGQKGGDEIKNYLFSDPKPTATIHFEGTKVGIQPS 269
Score = 45.7 bits (94), Expect(2) = 1e-039
Identities = 25/50 (50%), Positives = 30/50 (60%)
Frame = -1 / -1
Query: 152 LENAATRGADGDLPMTVPRNTMVAVGDGSVWT*YLILSPNFCPTIVAGTR 3
LE A DG +P VP +VAVG GS *+LI SP F PT VAG++
Sbjct: 295 LELNAATTGDG*IPTLVPSK*IVAVGFGSENK*FLISSPPF*PTAVAGSK 146
>gb|DT500719.1|DT500719 PX0019.BR.1_N12 PT-X-FL-A-1 Populus trichocarpa cDNA clone
PX0019_N12 5', mRNA sequence
Length = 684
Score = 192 bits (417), Expect(2) = 2e-062
Identities = 81/120 (67%), Positives = 94/120 (78%)
Frame = +1 / +2
Query: 127 APRVAAFSSRGPNYRAPEILKPDVIAPGVNILAAWTGAASPTDLDIDSRRVEFNIISGTS 306
+P VAAFSSRGPN P+ILKPD+IAPGVNILA W G+A PT L D RRVEFNIISGTS
Sbjct: 323 SPVVAAFSSRGPNSITPDILKPDMIAPGVNILAGWVGSAGPTGLATDGRRVEFNIISGTS 502
Query: 307 MSCPHVSGLAALLRQAHPEWSPAAIKSALMTTAYNLDNSGETIKDLATGVESTPFVRGAG 486
MSCPHVSGLAAL++ AHP+WSPAAI SALMTTAY +G ++D+ATG + + G G
Sbjct: 503 MSCPHVSGLAALIKAAHPDWSPAAIXSALMTTAYVTYKNGNKLQDVATGKDLRRLIMGPG 682
Score = 133 bits (286), Expect(2) = 4e-039
Identities = 68/119 (57%), Positives = 77/119 (64%)
Frame = -1 / -1
Query: 485 PAPRTNGVDSTPVARSLMVSPELSRLYAVVMSADLIAAGLHSGCAWRSSAARPLTCGQDM 306
P P S PVA S + P L AVVMSAD IAAGL SG A +AARPLTCGQD+
Sbjct: 681 PGPMIKRRRSFPVATSCNLLPFL*VT*AVVMSADXIAAGLQSG*AALINAARPLTCGQDI 502
Query: 305 DVPEMMLNSTRLESMSRSVGEAAPVHAASMLTPGAMTSGLRISGAR*LGPRLENAATRG 129
+VPEMMLNSTRL S++ VG A P A MLTPGA+ SG ++SG GP NAAT G
Sbjct: 501 EVPEMMLNSTRLPSVASPVGPAEPTQPAKMLTPGAIMSGFKMSGVIEFGPLELNAATTG 325
Score = 66.2 bits (139), Expect(2) = 2e-062
Identities = 26/42 (61%), Positives = 33/42 (78%)
Frame = +1 / +2
Query: 1 HLVPATMVGQKFGDKIRYYVQTDPSPTATIVFRGTVIGKSPS 126
HL+PAT VGQK GD+I+ Y+ +DP PTATI+F GT +G PS
Sbjct: 200 HLLPATAVGQKGGDEIKNYLFSDPKPTATILFEGTKVGIQPS 325
Score = 47.1 bits (97), Expect(2) = 4e-039
Identities = 25/50 (50%), Positives = 30/50 (60%)
Frame = -1 / -1
Query: 152 LENAATRGADGDLPMTVPRNTMVAVGDGSVWT*YLILSPNFCPTIVAGTR 3
LE A DG +P VP +VAVG GS *+LI SP F PT VAG++
Sbjct: 351 LELNAATTGDG*IPTLVPSKRIVAVGFGSENK*FLISSPPF*PTAVAGSK 202
>gb|DN501193.1|DN501193 UM70TE01.5pR Populus female catkins cDNA library Populus
trichocarpa cDNA clone UM70TE01 5', mRNA sequence
Length = 679
Score = 236 bits (512), Expect = 1e-061
Identities = 99/139 (71%), Positives = 114/139 (82%)
Frame = +1 / +2
Query: 127 APRVAAFSSRGPNYRAPEILKPDVIAPGVNILAAWTGAASPTDLDIDSRRVEFNIISGTS 306
+P VAAFSSRGPN P+ILKPD+IAPGVNILA W G+A PT L D RRVEFNIISGTS
Sbjct: 74 SPVVAAFSSRGPNSITPDILKPDMIAPGVNILAGWVGSAGPTGLATDGRRVEFNIISGTS 253
Query: 307 MSCPHVSGLAALLRQAHPEWSPAAIKSALMTTAYNLDNSGETIKDLATGVESTPFVRGAG 486
MSCPHVSGLAAL++ AHP+WSPAAIKSALMTTAY +G ++D+ATG +STPF GAG
Sbjct: 254 MSCPHVSGLAALIKAAHPDWSPAAIKSALMTTAYVTYKNGNKLQDVATGKDSTPFDHGAG 433
Query: 487 HVDPNAALDPRLVYDAGSD 543
HVDP +AL+P LVYD +D
Sbjct: 434 HVDPVSALNPGLVYDLTAD 490
Score = 158 bits (341), Expect = 2e-038
Identities = 82/139 (58%), Positives = 94/139 (67%)
Frame = -1 / -2
Query: 545 SSEPASYTSLGSRAALGST*PAPRTNGVDSTPVARSLMVSPELSRLYAVVMSADLIAAGL 366
SS S TS G A GST PAP +NGV+S PVA S + P L AVV+SADLIAAGL
Sbjct: 492 SSAVRS*TSPGLSAETGSTCPAP*SNGVESFPVATSCNLLPFL*VT*AVVISADLIAAGL 313
Query: 365 HSGCAWRSSAARPLTCGQDMDVPEMMLNSTRLESMSRSVGEAAPVHAASMLTPGAMTSGL 186
SG A +AARPLTCGQD++VPEMMLNSTRL S++ VG A P A MLTPGA+ SG
Sbjct: 312 QSG*AALINAARPLTCGQDIEVPEMMLNSTRLPSVASPVGPAEPTQPAKMLTPGAIMSGF 133
Query: 185 RISGAR*LGPRLENAATRG 129
++SG GP NAAT G
Sbjct: 132 KMSGVIEFGPLELNAATTG 76
>gb|BU895782.1|BU895782 X030H11 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 697
Score = 201 bits (437), Expect(2) = 3e-061
Identities = 84/130 (64%), Positives = 103/130 (79%)
Frame = +1 / +3
Query: 127 APRVAAFSSRGPNYRAPEILKPDVIAPGVNILAAWTGAASPTDLDIDSRRVEFNIISGTS 306
AP VA+FS RGPN +PEILKPD+IAPGVNILAAWT AA PT L+ D R+ EFNI+SGTS
Sbjct: 291 APVVASFSGRGPNGISPEILKPDLIAPGVNILAAWTDAAGPTGLESDPRKTEFNILSGTS 470
Query: 307 MSCPHVSGLAALLRQAHPEWSPAAIKSALMTTAYNLDNSGETIKDLATGVESTPFVRGAG 486
M+CPHVSG AALL+ AHP WSPAAI+SA+MTTA +N + + D ATG S+P+ GAG
Sbjct: 471 MACPHVSGAAALLKSAHPGWSPAAIRSAMMTTANTFNNLNQPMTDEATGKVSSPYDLGAG 650
Query: 487 HVDPNAALDP 516
H++ + A+DP
Sbjct: 651 HLNLDRAMDP 680
Score = 123 bits (265), Expect = 5e-028
Identities = 66/120 (55%), Positives = 77/120 (64%)
Frame = -1 / -1
Query: 485 PAPRTNGVDSTPVARSLMVSPELSRLYAVVMSADLIAAGLHSGCAWRSSAARPLTCGQDM 306
PAP++ G D+ PVA S++ L ++AVV+ ADLIAAGL G A S AA PLT G +
Sbjct: 649 PAPKSYGDDTFPVASSVIGWFRLLNVFAVVIIADLIAAGLQPG*ADLSKAAAPLT*GHAI 470
Query: 305 DVPEMMLNSTRLESMSRSVGEAAPVHAASMLTPGAMTSGLRISGAR*LGPRLENAATRGA 126
+VPE MLNS S S VG AA V AA M TPGA+ SGLRISG GP EN AT GA
Sbjct: 469 EVPERMLNSVFRGSDSNPVGPAASVQAARMFTPGAIKSGLRISGLIPFGPLPENEATTGA 290
Score = 53.0 bits (110), Expect(2) = 3e-061
Identities = 20/42 (47%), Positives = 28/42 (66%)
Frame = +1 / +3
Query: 1 HLVPATMVGQKFGDKIRYYVQTDPSPTATIVFRGTVIGKSPS 126
HL+PA +G GD ++ YV + +P ATI F+GTVIG P+
Sbjct: 168 HLIPACALGSDEGDAVKAYVSSTSNPVATIAFKGTVIGIKPA 293
>gb|CV227089.1|CV227089 WS0166.B21_C20 PT-DX-A-7 Populus trichocarpa cDNA clone WS0166_C20
3', mRNA sequence
Length = 854
Score = 216 bits (469), Expect(2) = 9e-058
Identities = 90/138 (65%), Positives = 108/138 (78%)
Frame = +1 / +3
Query: 127 APRVAAFSSRGPNYRAPEILKPDVIAPGVNILAAWTGAASPTDLDIDSRRVEFNIISGTS 306
AP V++FS+RGPN +PEILKPDVIAPG+NILAAW P+ + D R++EFNI+SGTS
Sbjct: 123 APVVSSFSARGPNPESPEILKPDVIAPGLNILAAWPDKIGPSGIPSDKRKIEFNILSGTS 302
Query: 307 MSCPHVSGLAALLRQAHPEWSPAAIKSALMTTAYNLDNSGETIKDLATGVESTPFVRGAG 486
M+CPHVSGLAALL+ AHPEWSPAAI+SALMTTAY +DN G T+ D +TG ST GAG
Sbjct: 303 MACPHVSGLAALLKAAHPEWSPAAIRSALMTTAYTVDNRGGTMLDESTGNVSTVLDFGAG 482
Query: 487 HVDPNAALDPRLVYDAGS 540
HV P A+DP L+YD S
Sbjct: 483 HVHPQKAMDPGLIYDITS 536
Score = 129 bits (277), Expect = 1e-029
Identities = 70/148 (47%), Positives = 85/148 (57%)
Frame = -1 / -2
Query: 515 GSRAALGST*PAPRTNGVDSTPVARSLMVSPELSRLYAVVMSADLIAAGLHSGCAWRSSA 336
GS A G T PAP++N V++ PV S +V P LS + AVV+ ADLIAAGLHSG A + A
Sbjct: 511 GSMAFCG*TWPAPKSNTVETFPVDSSSIVPPRLSTV*AVVIKADLIAAGLHSG*AAFNKA 332
Query: 335 ARPLTCGQDMDVPEMMLNSTRLESMSRSVGEAAPVHAASMLTPGAMTSGLRISGAR*LGP 156
A P TCGQ +DVPE +LNS S G AA M PGA+TSG +ISG GP
Sbjct: 331 ANPETCGQAIDVPERILNSIFRLSDGIPEGPILSGQAARMFKPGAITSGFKISGDSGFGP 152
Query: 155 RLENAATRGADGDLPMTVPRNTMVAVGD 72
EN T GA L + + + GD
Sbjct: 151 LAENEDTTGAGLTLTLVPLKTIVAVGGD 68
Score = 27.1 bits (53), Expect(2) = 9e-058
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +1 / +3
Query: 76 PTATIVFRGTVIGKSPS 126
PTATIVF+GT + P+
Sbjct: 75 PTATIVFKGTRVNVRPA 125
>gb|CV227798.1|CV227798 WS0168.B21_D21 PT-DX-A-7 Populus trichocarpa cDNA clone WS0168_D21
3', mRNA sequence
Length = 827
Score = 216 bits (469), Expect(2) = 9e-058
Identities = 90/138 (65%), Positives = 108/138 (78%)
Frame = +1 / +3
Query: 127 APRVAAFSSRGPNYRAPEILKPDVIAPGVNILAAWTGAASPTDLDIDSRRVEFNIISGTS 306
AP V++FS+RGPN +PEILKPDVIAPG+NILAAW P+ + D R++EFNI+SGTS
Sbjct: 123 APVVSSFSARGPNPESPEILKPDVIAPGLNILAAWPDKIGPSGIPSDKRKIEFNILSGTS 302
Query: 307 MSCPHVSGLAALLRQAHPEWSPAAIKSALMTTAYNLDNSGETIKDLATGVESTPFVRGAG 486
M+CPHVSGLAALL+ AHPEWSPAAI+SALMTTAY +DN G T+ D +TG ST GAG
Sbjct: 303 MACPHVSGLAALLKAAHPEWSPAAIRSALMTTAYTVDNRGGTMLDESTGNVSTVLDFGAG 482
Query: 487 HVDPNAALDPRLVYDAGS 540
HV P A+DP L+YD S
Sbjct: 483 HVHPQKAMDPGLIYDITS 536
Score = 129 bits (277), Expect = 1e-029
Identities = 70/148 (47%), Positives = 85/148 (57%)
Frame = -1 / -2
Query: 515 GSRAALGST*PAPRTNGVDSTPVARSLMVSPELSRLYAVVMSADLIAAGLHSGCAWRSSA 336
GS A G T PAP++N V++ PV S +V P LS + AVV+ ADLIAAGLHSG A + A
Sbjct: 511 GSMAFCG*TWPAPKSNTVETFPVDSSSIVPPRLSTV*AVVIKADLIAAGLHSG*AAFNKA 332
Query: 335 ARPLTCGQDMDVPEMMLNSTRLESMSRSVGEAAPVHAASMLTPGAMTSGLRISGAR*LGP 156
A P TCGQ +DVPE +LNS S G AA M PGA+TSG +ISG GP
Sbjct: 331 ANPETCGQAIDVPERILNSIFRLSDGIPEGPILSGQAARMFKPGAITSGFKISGDSGFGP 152
Query: 155 RLENAATRGADGDLPMTVPRNTMVAVGD 72
EN T GA L + + + GD
Sbjct: 151 LAENEDTTGAGLTLTLVPLKTIVAVGGD 68
Score = 27.1 bits (53), Expect(2) = 9e-058
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +1 / +3
Query: 76 PTATIVFRGTVIGKSPS 126
PTATIVF+GT + P+
Sbjct: 75 PTATIVFKGTRVNVRPA 125
>gb|BU892787.1|BU892787 P069E06 Populus petioles cDNA library Populus tremula cDNA 5 prime,
mRNA sequence
Length = 500
Score = 222 bits (482), Expect = 1e-057
Identities = 93/139 (66%), Positives = 111/139 (79%)
Frame = +1 / +2
Query: 127 APRVAAFSSRGPNYRAPEILKPDVIAPGVNILAAWTGAASPTDLDIDSRRVEFNIISGTS 306
+P VAAFSSRGPN P+ILKPD+IAP VNILA W G+ PT L D RRVEFNIIS TS
Sbjct: 23 SPVVAAFSSRGPNSITPDILKPDMIAPCVNILAGWVGSVGPTGLATDGRRVEFNIISRTS 202
Query: 307 MSCPHVSGLAALLRQAHPEWSPAAIKSALMTTAYNLDNSGETIKDLATGVESTPFVRGAG 486
MSCPHVSGLAAL++ AHP+WSP+AIKS+ MTTAY +G+ ++D+ATG +STPF GAG
Sbjct: 203 MSCPHVSGLAALIKAAHPDWSPSAIKSSFMTTAYVTYKNGKKLQDVATGKDSTPFDHGAG 382
Query: 487 HVDPNAALDPRLVYDAGSD 543
HVDP +AL+P LVYD +D
Sbjct: 383 HVDPVSALNPGLVYDLTAD 439
Score = 146 bits (316), Expect = 4e-035
Identities = 79/139 (56%), Positives = 90/139 (64%)
Frame = -1 / -3
Query: 545 SSEPASYTSLGSRAALGST*PAPRTNGVDSTPVARSLMVSPELSRLYAVVMSADLIAAGL 366
SS S TS G A GST PAP +NGV+S PVA S P L AVVM+ DLIA GL
Sbjct: 441 SSAVRS*TSPGLSAETGSTWPAP*SNGVESFPVATSCNFLPFL*VT*AVVMNDDLIADGL 262
Query: 365 HSGCAWRSSAARPLTCGQDMDVPEMMLNSTRLESMSRSVGEAAPVHAASMLTPGAMTSGL 186
SG A +AARPLTCGQD++V EMMLNSTRL S++R VG P A MLT GA+ SG
Sbjct: 261 QSG*AALINAARPLTCGQDIEVREMMLNSTRLPSVARPVGPTEPTQPAKMLTHGAIMSGF 82
Query: 185 RISGAR*LGPRLENAATRG 129
++SG LGP NAAT G
Sbjct: 81 KMSGVIELGPLELNAATTG 25
>gb|AJ775835.1|AJ775835 AJ775835 Populus euphratica root 3-6 months Populus euphratica cDNA
clone P0000400006B07F1, mRNA sequence
Length = 588
Score = 179 bits (387), Expect(2) = 1e-056
Identities = 74/94 (78%), Positives = 81/94 (86%)
Frame = +1 / +1
Query: 127 APRVAAFSSRGPNYRAPEILKPDVIAPGVNILAAWTGAASPTDLDIDSRRVEFNIISGTS 306
+P VAAFSSRGPN P+ILKPD+IAPGVNILA W G+ PT L D RRVEFNIISGTS
Sbjct: 298 SPVVAAFSSRGPNSITPDILKPDMIAPGVNILAGWVGSVGPTGLATDGRRVEFNIISGTS 477
Query: 307 MSCPHVSGLAALLRQAHPEWSPAAIKSALMTTAY 408
MSCPHVSGLAAL++ AHP+WSPAAIKSALMTTAY
Sbjct: 478 MSCPHVSGLAALIKAAHPDWSPAAIKSALMTTAY 579
Score = 125 bits (270), Expect = 1e-028
Identities = 59/92 (64%), Positives = 68/92 (73%)
Frame = -1 / -2
Query: 404 AVVMSADLIAAGLHSGCAWRSSAARPLTCGQDMDVPEMMLNSTRLESMSRSVGEAAPVHA 225
AVV+SADLIAAGL SG A +AARPLTCGQD++VPEMMLNSTRL S++ VG P
Sbjct: 575 AVVISADLIAAGLQSG*AALINAARPLTCGQDIEVPEMMLNSTRLPSVASPVGPTEPTQP 396
Query: 224 ASMLTPGAMTSGLRISGAR*LGPRLENAATRG 129
A MLTPGA+ SG ++SG LGP NAAT G
Sbjct: 395 AKMLTPGAIMSGFKMSGVIELGPLELNAATTG 300
Score = 60.8 bits (127), Expect(2) = 1e-056
Identities = 24/42 (57%), Positives = 31/42 (73%)
Frame = +1 / +1
Query: 1 HLVPATMVGQKFGDKIRYYVQTDPSPTATIVFRGTVIGKSPS 126
HL+PAT VGQK GD+I+ Y+ +D PT TI+F GT +G PS
Sbjct: 175 HLLPATAVGQKGGDEIKKYLFSDSKPTVTILFEGTKVGIQPS 300
>gb|DV466577.1|DV466577 MTUNUL1.P7.E02 NUL Populus fremontii x Populus angustifolia cDNA,
mRNA sequence
Length = 895
Score = 216 bits (469), Expect = 8e-056
Identities = 90/138 (65%), Positives = 108/138 (78%)
Frame = +1 / +2
Query: 127 APRVAAFSSRGPNYRAPEILKPDVIAPGVNILAAWTGAASPTDLDIDSRRVEFNIISGTS 306
AP V++FS+RGPN +PEILKPDVIAPG+NILAAW P+ + D R++EFNI+SGTS
Sbjct: 47 APVVSSFSARGPNPESPEILKPDVIAPGLNILAAWPDKIGPSGIPSDKRKIEFNILSGTS 226
Query: 307 MSCPHVSGLAALLRQAHPEWSPAAIKSALMTTAYNLDNSGETIKDLATGVESTPFVRGAG 486
M+CPHVSGLAALL+ AHPEWSPAAI+SALMTTAY +DN G T+ D +TG ST GAG
Sbjct: 227 MACPHVSGLAALLKAAHPEWSPAAIRSALMTTAYTVDNRGGTMLDESTGNVSTVLDFGAG 406
Query: 487 HVDPNAALDPRLVYDAGS 540
HV P A+DP L+YD S
Sbjct: 407 HVHPQKAMDPGLIYDITS 460
Score = 126 bits (272), Expect = 5e-029
Identities = 67/130 (51%), Positives = 79/130 (60%)
Frame = -1 / -2
Query: 515 GSRAALGST*PAPRTNGVDSTPVARSLMVSPELSRLYAVVMSADLIAAGLHSGCAWRSSA 336
GS A G T PAP++N V++ PV S +V P LS + AVV+ ADLIAAGLHSG A + A
Sbjct: 435 GSMAFCG*TWPAPKSNTVETFPVDSSSIVPPRLSTV*AVVIKADLIAAGLHSG*AAFNKA 256
Query: 335 ARPLTCGQDMDVPEMMLNSTRLESMSRSVGEAAPVHAASMLTPGAMTSGLRISGAR*LGP 156
A P TCGQ +DVPE +LNS S G AA M PGA+TSG +ISG GP
Sbjct: 255 ANPETCGQAIDVPERILNSIFRLSDGIPEGPILSGQAARMFKPGAITSGFKISGDSGFGP 76
Query: 155 RLENAATRGA 126
EN T GA
Sbjct: 75 LAENEDTTGA 46
>gb|DT509213.1|DT509213 WS02423.BR_B23 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02423_B23 5', mRNA sequence
Length = 743
Score = 215 bits (466), Expect = 2e-055
Identities = 90/138 (65%), Positives = 107/138 (77%)
Frame = +1 / +2
Query: 127 APRVAAFSSRGPNYRAPEILKPDVIAPGVNILAAWTGAASPTDLDIDSRRVEFNIISGTS 306
AP VA+FS+RGPN +PEILKPDVIAPG+NILAAWT P+ + D R++EFNI+SGTS
Sbjct: 17 APVVASFSARGPNPESPEILKPDVIAPGLNILAAWTDKVGPSGIPSDQRKIEFNILSGTS 196
Query: 307 MSCPHVSGLAALLRQAHPEWSPAAIKSALMTTAYNLDNSGETIKDLATGVESTPFVRGAG 486
M+CPHVSGLAALL+ AHPEWS AAI+SALMTTAY +DN GE + D +TG ST GAG
Sbjct: 197 MACPHVSGLAALLKAAHPEWSSAAIRSALMTTAYTVDNRGEEMIDESTGNVSTVLDFGAG 376
Query: 487 HVDPNAALDPRLVYDAGS 540
HV P A+ P L+YD S
Sbjct: 377 HVHPQKAMKPGLIYDISS 430
Score = 140 bits (303), Expect = 3e-033
Identities = 73/140 (52%), Positives = 89/140 (63%)
Frame = -1 / -3
Query: 545 SSEPASYTSLGSRAALGST*PAPRTNGVDSTPVARSLMVSPELSRLYAVVMSADLIAAGL 366
S++ S + G A G T*PAP++N V++ PV S++ SP LS +YAVV++ADLIAA L
Sbjct: 435 SNDEIS*INPGFMAFCG*T*PAPKSNTVETFPVDSSIISSPRLSTVYAVVINADLIAAEL 256
Query: 365 HSGCAWRSSAARPLTCGQDMDVPEMMLNSTRLESMSRSVGEAAPVHAASMLTPGAMTSGL 186
HSG A + AA P TCGQ +DVPE MLNS S G V AASM PGA+TSG
Sbjct: 255 HSG*AAFNKAANPETCGQAIDVPERMLNSIFRWSDGIPEGPTLSVQAASMFKPGAITSGF 76
Query: 185 RISGAR*LGPRLENAATRGA 126
+ISG GP EN AT GA
Sbjct: 75 KISGDSGFGPLAENEATTGA 16
>gb|DV465235.1|DV465235 MTUNUL1.P36.H11 NUL Populus fremontii x Populus angustifolia cDNA,
mRNA sequence
Length = 904
Score = 215 bits (466), Expect = 2e-055
Identities = 88/139 (63%), Positives = 106/139 (76%)
Frame = +1 / +2
Query: 127 APRVAAFSSRGPNYRAPEILKPDVIAPGVNILAAWTGAASPTDLDIDSRRVEFNIISGTS 306
+P VAAFSSRGPN EILKPD+I PGVNILAAW+ PT L+ D+R+ +FNI+SGTS
Sbjct: 83 SPVVAAFSSRGPNLVTREILKPDLIGPGVNILAAWSETIGPTGLETDTRKTQFNIMSGTS 262
Query: 307 MSCPHVSGLAALLRQAHPEWSPAAIKSALMTTAYNLDNSGETIKDLATGVESTPFVRGAG 486
MSCPH+SG+AALL+ AHP WSP+AIKSALMTTAY DN+ ++D A G S P+ G+G
Sbjct: 263 MSCPHISGVAALLKAAHPTWSPSAIKSALMTTAYVSDNTNSPLQDAAGGALSNPWAHGSG 442
Query: 487 HVDPNAALDPRLVYDAGSD 543
HVDP AL P LVYD +D
Sbjct: 443 HVDPQKALSPGLVYDISTD 499
Score = 128 bits (275), Expect = 2e-029
Identities = 71/139 (51%), Positives = 81/139 (58%)
Frame = -1 / -2
Query: 545 SSEPASYTSLGSRAALGST*PAPRTNGVDSTPVARSLMVSPELSRLYAVVMSADLIAAGL 366
SS SYT G RA GST*P P +G +S P A S LS AVVM ADLIA GL
Sbjct: 501 SSVEISYTRPGERAFCGST*PDP*AHGFESAPPAASWSGELVLSLT*AVVMRADLIALGL 322
Query: 365 HSGCAWRSSAARPLTCGQDMDVPEMMLNSTRLESMSRSVGEAAPVHAASMLTPGAMTSGL 186
H G A S+AA PL CG D+DVP+M+LN L S+S VG AA++LTPG + SG
Sbjct: 321 HVGWAAFSNAATPLMCGHDIDVPDMILN*VFLVSVSSPVGPIVSDQAANILTPGPIKSGF 142
Query: 185 RISGAR*LGPRLENAATRG 129
IS GP NAAT G
Sbjct: 141 NISLVTKFGPLELNAATTG 85
>gb|AJ777023.1|AJ777023 AJ777023 Populus euphratica root 3-6 months Populus euphratica cDNA
clone P0000400021H04F1, mRNA sequence
Length = 707
Score = 188 bits (407), Expect(2) = 5e-055
Identities = 79/109 (72%), Positives = 88/109 (80%)
Frame = +1 / +2
Query: 127 APRVAAFSSRGPNYRAPEILKPDVIAPGVNILAAWTGAASPTDLDIDSRRVEFNIISGTS 306
+P +AAFSSRGPN PE+LKPD+IAPGVNILA WTGA PT L D R V FNIISGTS
Sbjct: 380 SPVLAAFSSRGPNLVTPEVLKPDLIAPGVNILAGWTGAVGPTGLTSDKRHVSFNIISGTS 559
Query: 307 MSCPHVSGLAALLRQAHPEWSPAAIKSALMTTAYNLDNSGETIKDLATG 453
MSCPHVSGLAAL++ AH +WSPAAIKSALMTTAY +GE I D+ATG
Sbjct: 560 MSCPHVSGLAALIKAAHQDWSPAAIKSALMTTAYATYKNGENILDVATG 706
Score = 114 bits (244), Expect(2) = 6e-032
Identities = 62/108 (57%), Positives = 67/108 (62%)
Frame = -1 / -3
Query: 452 PVARSLMVSPELSRLYAVVMSADLIAAGLHSGCAWRSSAARPLTCGQDMDVPEMMLNSTR 273
PVA S M SP L AVVM ADL+AAGL S A SAA PLT G D+DVPEM+L T
Sbjct: 705 PVATSNMFSPFLYVA*AVVMRADLMAAGLQSW*AALMSAANPLT*GHDIDVPEMILKLTC 526
Query: 272 LESMSRSVGEAAPVHAASMLTPGAMTSGLRISGAR*LGPRLENAATRG 129
L S+ VG APVH A MLTPGA+ SGL SG GP NAA G
Sbjct: 525 LLSLVSPVGPTAPVHPARMLTPGAIRSGLSTSGVTRFGPLELNAANTG 382
Score = 46.2 bits (95), Expect(2) = 5e-055
Identities = 19/42 (45%), Positives = 25/42 (59%)
Frame = +1 / +2
Query: 1 HLVPATMVGQKFGDKIRYYVQTDPSPTATIVFRGTVIGKSPS 126
HL+P + VGQ+ D I+ Y +D P ATI GT +G PS
Sbjct: 257 HLLPTSTVGQRTADAIKNYAFSDAKPMATIASGGTKLGVEPS 382
Score = 42.1 bits (86), Expect(2) = 6e-032
Identities = 21/50 (42%), Positives = 25/50 (50%)
Frame = -1 / -3
Query: 152 LENAATRGADGDLPMTVPRNTMVAVGDGSVWT*YLILSPNFCPTIVAGTR 3
LE A DG P VP +VA+G S *+LI S CPT+ G R
Sbjct: 408 LELNAANTGDGSTPSFVPPEAIVAIGFASEKA*FLIASAVLCPTVDVGRR 259
>gb|CF234937.1|CF234937 PtaJXT0016H6H0616 Poplar cDNA library from young tension xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 772
Score = 210 bits (456), Expect = 5e-054
Identities = 90/123 (73%), Positives = 98/123 (79%)
Frame = +1 / +3
Query: 175 PEILKPDVIAPGVNILAAWTGAASPTDLDIDSRRVEFNIISGTSMSCPHVSGLAALLRQA 354
PE+LKPD+IAPGVNILA WTG PT L D R VEFNIISGTSMSCPHVSGLAAL++ A
Sbjct: 21 PEVLKPDLIAPGVNILAGWTGGVGPTGLTNDKRHVEFNIISGTSMSCPHVSGLAALIKAA 200
Query: 355 HPEWSPAAIKSALMTTAYNLDNSGETIKDLATGVESTPFVRGAGHVDPNAALDPRLVYDA 534
H +WSPAAIKSALMTTAY +GE I D+ATG STPF GAGHV+P AALDP LVYDA
Sbjct: 201 HQDWSPAAIKSALMTTAYATYKNGENILDVATGQPSTPFDYGAGHVNPVAALDPGLVYDA 380
Query: 535 GSD 543
D
Sbjct: 381 TVD 389
Score = 144 bits (310), Expect = 3e-034
Identities = 77/124 (62%), Positives = 82/124 (66%)
Frame = -1 / -1
Query: 545 SSEPASYTSLGSRAALGST*PAPRTNGVDSTPVARSLMVSPELSRLYAVVMSADLIAAGL 366
SS AS T GSRAA G T PAP +NGVD PVA S M SP L AVVM ADL+AAGL
Sbjct: 391 SSTVAS*TRPGSRAATGFTCPAP*SNGVDGCPVATSNMFSPFLYVA*AVVMRADLMAAGL 212
Query: 365 HSGCAWRSSAARPLTCGQDMDVPEMMLNSTRLESMSRSVGEAAPVHAASMLTPGAMTSGL 186
S A SAA PLT G D+DVPEM+LNST L S VG PVH ASMLTPGA+ SGL
Sbjct: 211 QSW*AALMSAANPLTWGHDIDVPEMILNSTCLLSFVSPVGPTPPVHPASMLTPGAIRSGL 32
Query: 185 RISG 174
SG
Sbjct: 31 STSG 20
>gb|CA931088.1|CA931088 MTU2TA.P1.H03 Aspen apex cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 580
Score = 210 bits (455), Expect = 7e-054
Identities = 87/135 (64%), Positives = 107/135 (79%)
Frame = +1 / +2
Query: 127 APRVAAFSSRGPNYRAPEILKPDVIAPGVNILAAWTGAASPTDLDIDSRRVEFNIISGTS 306
AP VA+FS RGPN PEILKPD+IAPGVNILAAWT A PT LD D+R+ EFNI+SGTS
Sbjct: 20 APVVASFSGRGPNGLTPEILKPDLIAPGVNILAAWTDAVGPTGLDSDTRKTEFNILSGTS 199
Query: 307 MSCPHVSGLAALLRQAHPEWSPAAIKSALMTTAYNLDNSGETIKDLATGVESTPFVRGAG 486
M+CPHVSG AALL+ AHP+WSPAAI+SA+MTTA +N +++ D ATG S+ + GAG
Sbjct: 200 MACPHVSGAAALLKSAHPDWSPAAIRSAMMTTANTFNNLNQSMTDEATGNVSSSYDLGAG 379
Query: 487 HVDPNAALDPRLVYD 531
H++ + A+DP LVYD
Sbjct: 380 HLNLDRAMDPGLVYD 424
Score = 121 bits (260), Expect = 2e-027
Identities = 68/133 (51%), Positives = 79/133 (59%)
Frame = -1 / -2
Query: 524 TSLGSRAALGST*PAPRTNGVDSTPVARSLMVSPELSRLYAVVMSADLIAAGLHSGCAWR 345
T+ GS A PAP++ D+ PVA S++ L + AVV+ ADLIAAGL SG A
Sbjct: 417 TNPGSIARSRLRCPAPKSYDDDTFPVASSVIDWFRLLNVLAVVIIADLIAAGLQSGWADL 238
Query: 344 SSAARPLTCGQDMDVPEMMLNSTRLESMSRSVGEAAPVHAASMLTPGAMTSGLRISGAR* 165
S AA PLT G ++VPE MLNS S S VG A V AA M TPGA+ SG RISG
Sbjct: 237 SKAAAPLT*GHAIEVPERMLNSVFRVSESNPVGPTASVQAARMFTPGAIKSGFRISGVNP 58
Query: 164 LGPRLENAATRGA 126
GP EN AT GA
Sbjct: 57 FGPLPENEATTGA 19
>gb|CA931785.1|CA931785 MTU4TA.P22.H08 Aspen apex cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 595
Score = 210 bits (455), Expect = 7e-054
Identities = 87/135 (64%), Positives = 107/135 (79%)
Frame = +1 / +2
Query: 127 APRVAAFSSRGPNYRAPEILKPDVIAPGVNILAAWTGAASPTDLDIDSRRVEFNIISGTS 306
AP VA+FS RGPN PEILKPD+IAPGVNILAAWT A PT LD D+R+ EFNI+SGTS
Sbjct: 20 APVVASFSGRGPNGLTPEILKPDLIAPGVNILAAWTDAVGPTGLDSDTRKTEFNILSGTS 199
Query: 307 MSCPHVSGLAALLRQAHPEWSPAAIKSALMTTAYNLDNSGETIKDLATGVESTPFVRGAG 486
M+CPHVSG AALL+ AHP+WSPAAI+SA+MTTA +N +++ D ATG S+ + GAG
Sbjct: 200 MACPHVSGAAALLKSAHPDWSPAAIRSAMMTTANTFNNLNQSMTDEATGNVSSSYDLGAG 379
Query: 487 HVDPNAALDPRLVYD 531
H++ + A+DP LVYD
Sbjct: 380 HLNLDRAMDPGLVYD 424
Score = 121 bits (260), Expect = 2e-027
Identities = 68/133 (51%), Positives = 79/133 (59%)
Frame = -1 / -2
Query: 524 TSLGSRAALGST*PAPRTNGVDSTPVARSLMVSPELSRLYAVVMSADLIAAGLHSGCAWR 345
T+ GS A PAP++ D+ PVA S++ L + AVV+ ADLIAAGL SG A
Sbjct: 417 TNPGSIARSRLRCPAPKSYDDDTFPVASSVIDWFRLLNVLAVVIIADLIAAGLQSGWADL 238
Query: 344 SSAARPLTCGQDMDVPEMMLNSTRLESMSRSVGEAAPVHAASMLTPGAMTSGLRISGAR* 165
S AA PLT G ++VPE MLNS S S VG A V AA M TPGA+ SG RISG
Sbjct: 237 SKAAAPLT*GHAIEVPERMLNSVFRVSESNPVGPTASVQAARMFTPGAIKSGFRISGVNP 58
Query: 164 LGPRLENAATRGA 126
GP EN AT GA
Sbjct: 57 FGPLPENEATTGA 19
>gb|CA931535.1|CA931535 MTU2TA.P8.F10 Aspen apex cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 554
Score = 209 bits (453), Expect = 1e-053
Identities = 87/135 (64%), Positives = 106/135 (78%)
Frame = +1 / +3
Query: 127 APRVAAFSSRGPNYRAPEILKPDVIAPGVNILAAWTGAASPTDLDIDSRRVEFNIISGTS 306
AP VA+FS RGPN PEILKPD+IAPGVNILAAWT A PT LD D+R+ EFNI+SGTS
Sbjct: 39 APVVASFSGRGPNGLTPEILKPDLIAPGVNILAAWTDAVGPTGLDSDTRKTEFNILSGTS 218
Query: 307 MSCPHVSGLAALLRQAHPEWSPAAIKSALMTTAYNLDNSGETIKDLATGVESTPFVRGAG 486
M+CPHVSG AALL+ AHP+WSPAAI+SA+MTTA +N + + D ATG S+ + GAG
Sbjct: 219 MACPHVSGAAALLKSAHPDWSPAAIRSAMMTTANTFNNLNQPMTDEATGNVSSSYDLGAG 398
Query: 487 HVDPNAALDPRLVYD 531
H++ + A+DP LVYD
Sbjct: 399 HLNLDRAMDPGLVYD 443
Score = 121 bits (260), Expect = 2e-027
Identities = 68/133 (51%), Positives = 79/133 (59%)
Frame = -1 / -2
Query: 524 TSLGSRAALGST*PAPRTNGVDSTPVARSLMVSPELSRLYAVVMSADLIAAGLHSGCAWR 345
T+ GS A PAP++ D+ PVA S++ L + AVV+ ADLIAAGL SG A
Sbjct: 436 TNPGSIARSRLRCPAPKSYDDDTFPVASSVIGWFRLLNVLAVVIIADLIAAGLQSGWADL 257
Query: 344 SSAARPLTCGQDMDVPEMMLNSTRLESMSRSVGEAAPVHAASMLTPGAMTSGLRISGAR* 165
S AA PLT G ++VPE MLNS S S VG A V AA M TPGA+ SG RISG
Sbjct: 256 SKAAAPLT*GHAIEVPERMLNSVFRVSESNPVGPTASVQAARMFTPGAIKSGFRISGVNP 77
Query: 164 LGPRLENAATRGA 126
GP EN AT GA
Sbjct: 76 FGPLPENEATTGA 38
>gb|BU812249.1|BU812249 UL94TA04 Populus leaf cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 628
Score = 207 bits (450), Expect = 3e-053
Identities = 89/122 (72%), Positives = 97/122 (79%)
Frame = +1 / +1
Query: 178 EILKPDVIAPGVNILAAWTGAASPTDLDIDSRRVEFNIISGTSMSCPHVSGLAALLRQAH 357
E+LKPD+IAPGVNILA WTGA PT L D R V FNIISGTSMSCPHVSGLAAL++ AH
Sbjct: 1 EVLKPDLIAPGVNILAGWTGAVGPTGLTSDKRHVSFNIISGTSMSCPHVSGLAALIKAAH 180
Query: 358 PEWSPAAIKSALMTTAYNLDNSGETIKDLATGVESTPFVRGAGHVDPNAALDPRLVYDAG 537
+WSPAAIKSALMTTAY +GE I D+ATG STPF GAGHV+P AALDP LVYDA
Sbjct: 181 QDWSPAAIKSALMTTAYATYKNGENILDVATGQPSTPFDFGAGHVNPVAALDPGLVYDAS 360
Query: 538 SD 543
D
Sbjct: 361 VD 366
Score = 140 bits (302), Expect = 4e-033
Identities = 74/120 (61%), Positives = 81/120 (67%)
Frame = -1 / -3
Query: 545 SSEPASYTSLGSRAALGST*PAPRTNGVDSTPVARSLMVSPELSRLYAVVMSADLIAAGL 366
SS AS T GSRAA G T PAP++NGVD PVA S M SP L AVVM ADL+AAGL
Sbjct: 368 SSTEAS*TRPGSRAATGFTCPAPKSNGVDGCPVATSNMFSPFLYVA*AVVMRADLMAAGL 189
Query: 365 HSGCAWRSSAARPLTCGQDMDVPEMMLNSTRLESMSRSVGEAAPVHAASMLTPGAMTSGL 186
S A SAA PLT G D+DVPEM+L T L S+ VG APVH ASMLTPGA+ SGL
Sbjct: 188 QSW*AALMSAANPLT*GHDIDVPEMILKLTCLLSLVSPVGPTAPVHPASMLTPGAIRSGL 9
>gb|BU883192.1|BU883192 UM87TD10 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 610
Score = 176 bits (381), Expect(2) = 8e-052
Identities = 73/94 (77%), Positives = 81/94 (86%)
Frame = +1 / +3
Query: 127 APRVAAFSSRGPNYRAPEILKPDVIAPGVNILAAWTGAASPTDLDIDSRRVEFNIISGTS 306
+P VAAFSSRGPN+ EILKPDV+APGVNILAAWTG P+ L D RRV+FNI+SGTS
Sbjct: 327 SPVVAAFSSRGPNFLTLEILKPDVLAPGVNILAAWTGDLGPSSLPTDHRRVKFNILSGTS 506
Query: 307 MSCPHVSGLAALLRQAHPEWSPAAIKSALMTTAY 408
MSCPHVSG+AALL+ HPEWSPAAIKSALMTTAY
Sbjct: 507 MSCPHVSGIAALLKARHPEWSPAAIKSALMTTAY 608
Score = 133 bits (286), Expect(2) = 2e-036
Identities = 63/92 (68%), Positives = 68/92 (73%)
Frame = -1 / -1
Query: 404 AVVMSADLIAAGLHSGCAWRSSAARPLTCGQDMDVPEMMLNSTRLESMSRSVGEAAPVHA 225
AVV+SADLIAAGLHSGC S AA PLTCGQDM+VPE MLN T L S+ + G +PV A
Sbjct: 604 AVVISADLIAAGLHSGCLALSKAAIPLTCGQDMEVPERMLNLTLL*SVGKLDGPKSPVQA 425
Query: 224 ASMLTPGAMTSGLRISGAR*LGPRLENAATRG 129
ASM TPGA TSG RIS R LGP ENAAT G
Sbjct: 424 ASMFTPGARTSGFRISRVRKLGPLDENAATTG 329
Score = 47.1 bits (97), Expect(2) = 8e-052
Identities = 20/42 (47%), Positives = 26/42 (61%)
Frame = +1 / +3
Query: 1 HLVPATMVGQKFGDKIRYYVQTDPSPTATIVFRGTVIGKSPS 126
HL+PA VG+K G I+ Y T + TAT+ F GT +G PS
Sbjct: 204 HLLPAVAVGEKEGKLIKTYALTSQNATATLAFLGTRLGIKPS 329
Score = 38.0 bits (77), Expect(2) = 2e-036
Identities = 21/50 (42%), Positives = 26/50 (52%)
Frame = -1 / -1
Query: 152 LENAATRGADGDLPMTVPRNTMVAVGDGSVWT*YLILSPNFCPTIVAGTR 3
L+ A +G +P VPR VAV V * LI P+F PT AG+R
Sbjct: 355 LDENAATTGEGLIPNLVPRKARVAVAF*LVKA*VLINFPSFSPTATAGSR 206
>gb|BU814694.1|BU814694 N031H09 Populus bark cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 716
Score = 181 bits (393), Expect(3) = 3e-051
Identities = 73/101 (72%), Positives = 86/101 (85%)
Frame = +1 / +1
Query: 127 APRVAAFSSRGPNYRAPEILKPDVIAPGVNILAAWTGAASPTDLDIDSRRVEFNIISGTS 306
AP VA+FS+RGPN +PEILKPDVIAPG+NILAAW P+ + D R++EFNI+SGTS
Sbjct: 175 APVVASFSARGPNPESPEILKPDVIAPGLNILAAWPDKVGPSGIPSDRRKIEFNILSGTS 354
Query: 307 MSCPHVSGLAALLRQAHPEWSPAAIKSALMTTAYNLDNSGE 429
M+CPHVSGLAALL+ AHPEWSPAAI+SALMTTAY +DN GE
Sbjct: 355 MACPHVSGLAALLKAAHPEWSPAAIRSALMTTAYTVDNRGE 477
Score = 120 bits (258), Expect = 4e-027
Identities = 61/122 (50%), Positives = 73/122 (59%)
Frame = -1 / -1
Query: 437 LMVSPELSRLYAVVMSADLIAAGLHSGCAWRSSAARPLTCGQDMDVPEMMLNSTRLESMS 258
++ SP LS +YAVV+SADLIAAGLHSG A + AA P TCGQ +DVP+ MLNS S
Sbjct: 485 IISSPRLSTVYAVVISADLIAAGLHSG*AAFNKAANPETCGQAIDVPDRMLNSIFRRSDG 306
Query: 257 RSVGEAAPVHAASMLTPGAMTSGLRISGAR*LGPRLENAATRGADGDLPMTVPRNTMVAV 78
G AASM PGA+TSG +ISG GP EN AT GA L + + +
Sbjct: 305 IPEGPTLSGQAASMFKPGAITSGFKISGDSGFGPLAENEATTGAGRTLTLVPLKTIVAVG 126
Query: 77 GD 72
GD
Sbjct: 125 GD 120
Score = 29.8 bits (59), Expect(3) = 3e-051
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +1 / +1
Query: 1 HLVPATMVGQKFGDKIRYYV 60
H++PAT VG GD+IR Y+
Sbjct: 37 HVLPATAVGASGGDEIRRYM 96
Score = 28.4 bits (56), Expect(3) = 3e-051
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +1 / +1
Query: 76 PTATIVFRGTVIGKSPS 126
PTATIVFRGT + P+
Sbjct: 127 PTATIVFRGTRVNVRPA 177
>gb|CA934790.1|CA934790 MTU5TS.P23.H02 Aspen stem cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 537
Score = 199 bits (432), Expect = 1e-050
Identities = 86/119 (72%), Positives = 93/119 (78%)
Frame = +1 / +3
Query: 187 KPDVIAPGVNILAAWTGAASPTDLDIDSRRVEFNIISGTSMSCPHVSGLAALLRQAHPEW 366
KPD+IAPGVNILA WTGA PT L D R V FNIISGTSMSCPHVSGLAAL++ AH +W
Sbjct: 3 KPDLIAPGVNILAGWTGAVGPTGLTSDKRHVSFNIISGTSMSCPHVSGLAALIKAAHQDW 182
Query: 367 SPAAIKSALMTTAYNLDNSGETIKDLATGVESTPFVRGAGHVDPNAALDPRLVYDAGSD 543
SPAAIKSA MTTAY +GE I D+ATG STPF GAGHV+P AALDP LVYDA D
Sbjct: 183 SPAAIKSARMTTAYATYKNGENILDVATGQPSTPFDFGAGHVNPVAALDPGLVYDASVD 359
Score = 140 bits (303), Expect = 3e-033
Identities = 74/120 (61%), Positives = 81/120 (67%)
Frame = -1 / -3
Query: 545 SSEPASYTSLGSRAALGST*PAPRTNGVDSTPVARSLMVSPELSRLYAVVMSADLIAAGL 366
SS AS T GSRAA G T PAP++NGVD PVA S M SP L AVVM ADL+AAGL
Sbjct: 361 SSTEAS*TRPGSRAATGFTCPAPKSNGVDGCPVATSKMFSPFLYVA*AVVMRADLMAAGL 182
Query: 365 HSGCAWRSSAARPLTCGQDMDVPEMMLNSTRLESMSRSVGEAAPVHAASMLTPGAMTSGL 186
S A SAA PLT G D+DVPEM+L T L S+ VG APVH ASMLTPGA+ SGL
Sbjct: 181 QSW*AALMSAANPLT*GHDIDVPEMILKLTCLLSLVSPVGPTAPVHPASMLTPGAIRSGL 2
>gb|BU892669.1|BU892669 P066H06 Populus petioles cDNA library Populus tremula cDNA 5 prime,
mRNA sequence
Length = 649
Score = 172 bits (372), Expect(2) = 2e-048
Identities = 76/120 (63%), Positives = 86/120 (71%)
Frame = +1 / +3
Query: 127 APRVAAFSSRGPNYRAPEILKPDVIAPGVNILAAWTGAASPTDLDIDSRRVEFNIISGTS 306
AP +AAFSSRGP+ P+++KPDV APGVNILAAW SPT L D R V FN+ISGTS
Sbjct: 282 APLLAAFSSRGPSSVGPDVIKPDVTAPGVNILAAWPPMTSPTLLKSDKRSVLFNVISGTS 461
Query: 307 MSCPHVSGLAALLRQAHPEWSPAAIKSALMTTAYNLDNSGETIKDLATGVESTPFVRGAG 486
MSCPHVSGLAALL+ H WSPAAIKSALMTTAY DN G I D A+ ++ G G
Sbjct: 462 MSCPHVSGLAALLKSVHKTWSPAAIKSALMTTAYATDNRGSPIADAASSNSASATPFGFG 641
Score = 110 bits (237), Expect = 3e-024
Identities = 61/107 (57%), Positives = 69/107 (64%)
Frame = -1 / -1
Query: 446 ARSLMVSPELSRLYAVVMSADLIAAGLHSGCAWRSSAARPLTCGQDMDVPEMMLNSTRLE 267
A S + P LS AVV+SADLIAAG H SSAARPLT GQD++VPE+ LN+T L
Sbjct: 601 AASAIGDPLLSVA*AVVISADLIAAGDHVLWTDLSSAARPLT*GQDIEVPEITLNNTLLL 422
Query: 266 SMSRSVGEAAPVHAASMLTPGAMTSGLRISGAR*LGPRLENAATRGA 126
S+ VG HAA M TPGA+TSGL SG LGP ENAA GA
Sbjct: 421 SLLSRVGLVIGGHAAKMFTPGAVTSGLITSGPTELGPLDENAANNGA 281
Score = 39.8 bits (81), Expect(2) = 2e-048
Identities = 15/38 (39%), Positives = 24/38 (63%)
Frame = +1 / +3
Query: 1 HLVPATMVGQKFGDKIRYYVQTDPSPTATIVFRGTVIG 114
H++PAT +G G ++ Y+ + TA+I F+GTV G
Sbjct: 162 HVLPATSLGASAGIAVKEYMNSTKRATASIAFKGTVYG 275
>gb|CA928981.1|CA928981 MTU6TR.P9.B03 Aspen root cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 695
Score = 161 bits (348), Expect(2) = 3e-046
Identities = 68/103 (66%), Positives = 81/103 (78%)
Frame = +1 / -2
Query: 127 APRVAAFSSRGPNYRAPEILKPDVIAPGVNILAAWTGAASPTDLDIDSRRVEFNIISGTS 306
AP VAAFSS+GPN PEILKPD+ APGV+++AA+T A PT+ D D+RRV FN ISGTS
Sbjct: 442 APVVAAFSSKGPNTVTPEILKPDITAPGVSVIAAFTKAQGPTNQDFDTRRVLFNSISGTS 263
Query: 307 MSCPHVSGLAALLRQAHPEWSPAAIKSALMTTAYNLDNSGETI 435
MSCPHVSG+ LL+ HP WSPA+IKSA+MTTA DN+ E I
Sbjct: 262 MSCPHVSGIVGLLKTLHPTWSPASIKSAIMTTATAQDNTMEPI 134
Score = 43.5 bits (89), Expect(2) = 3e-046
Identities = 16/29 (55%), Positives = 21/29 (72%)
Frame = +1 / -2
Query: 445 ATGVESTPFVRGAGHVDPNAALDPRLVYD 531
A +++PF GAGH+ PN A+DP LVYD
Sbjct: 127 ANHTKASPFSYGAGHIRPNKAMDPGLVYD 41
>gb|CA928847.1|CA928847 MTU6TR.P7.E10 Aspen root cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 693
Score = 161 bits (348), Expect(2) = 3e-046
Identities = 68/103 (66%), Positives = 81/103 (78%)
Frame = +1 / -3
Query: 127 APRVAAFSSRGPNYRAPEILKPDVIAPGVNILAAWTGAASPTDLDIDSRRVEFNIISGTS 306
AP VAAFSS+GPN PEILKPD+ APGV+++AA+T A PT+ D D+RRV FN ISGTS
Sbjct: 442 APVVAAFSSKGPNTVTPEILKPDITAPGVSVIAAFTKAQGPTNQDFDTRRVLFNSISGTS 263
Query: 307 MSCPHVSGLAALLRQAHPEWSPAAIKSALMTTAYNLDNSGETI 435
MSCPHVSG+ LL+ HP WSPA+IKSA+MTTA DN+ E I
Sbjct: 262 MSCPHVSGIVGLLKTLHPTWSPASIKSAIMTTATAQDNTMEPI 134
Score = 43.5 bits (89), Expect(2) = 3e-046
Identities = 16/29 (55%), Positives = 21/29 (72%)
Frame = +1 / -3
Query: 445 ATGVESTPFVRGAGHVDPNAALDPRLVYD 531
A +++PF GAGH+ PN A+DP LVYD
Sbjct: 127 ANHTKASPFSYGAGHIRPNKAMDPGLVYD 41
>gb|AI163117.1|AI163117 A033P65U Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA 5', mRNA sequence
Length = 396
Score = 183 bits (397), Expect = 6e-046
Identities = 75/117 (64%), Positives = 94/117 (80%)
Frame = +1 / +2
Query: 181 ILKPDVIAPGVNILAAWTGAASPTDLDIDSRRVEFNIISGTSMSCPHVSGLAALLRQAHP 360
ILKPD+IAPGVNILAAWT A PT LD D+R+ EFNI+SGTSM+CPHVSG AALL+ AHP
Sbjct: 2 ILKPDLIAPGVNILAAWTDAVGPTGLDSDTRKTEFNILSGTSMACPHVSGAAALLKSAHP 181
Query: 361 EWSPAAIKSALMTTAYNLDNSGETIKDLATGVESTPFVRGAGHVDPNAALDPRLVYD 531
+WSPAAI+SA+MTTA +N +++ D ATG S+ + GAGH++ + A+DP LVYD
Sbjct: 182 DWSPAAIRSAMMTTANTFNNLNQSMTDEATGNVSSSYDLGAGHLNLDRAMDPGLVYD 352
Score = 101 bits (216), Expect = 3e-021
Identities = 58/115 (50%), Positives = 68/115 (59%)
Frame = -1 / -1
Query: 524 TSLGSRAALGST*PAPRTNGVDSTPVARSLMVSPELSRLYAVVMSADLIAAGLHSGCAWR 345
T+ GS A PAP++ D+ PVA S+ L + AVV+ ADLIAAGL SG A
Sbjct: 345 TNPGSIARSRLRCPAPKSYDDDTFPVASSVXDWFRLLNVLAVVIIADLIAAGLQSGWADL 166
Query: 344 SSAARPLTCGQDMDVPEMMLNSTRLESMSRSVGEAAPVHAASMLTPGAMTSGLRI 180
S AA PLT G ++VPE MLNS S S VG A V AA M TPGA+ SG RI
Sbjct: 165 SKAAAPLT*GHAIEVPERMLNSVFRVSESNPVGPTASVQAARMFTPGAIKSGFRI 1
>gb|CK106405.1|CK106405 UB19CPH06.5pR Populus active cambium cDNA library Populus tremula
cDNA clone UB19CPH06 5', mRNA sequence
Length = 630
Score = 155 bits (336), Expect(2) = 3e-045
Identities = 63/105 (60%), Positives = 79/105 (75%)
Frame = +1 / +2
Query: 127 APRVAAFSSRGPNYRAPEILKPDVIAPGVNILAAWTGAASPTDLDIDSRRVEFNIISGTS 306
AP +A+FSSRGPN ILKPD+ APGV+++AA+T A PTD D RR+ FN SGTS
Sbjct: 113 APSMASFSSRGPNILEESILKPDITAPGVSVIAAFTLATGPTDAAYDKRRIPFNTESGTS 292
Query: 307 MSCPHVSGLAALLRQAHPEWSPAAIKSALMTTAYNLDNSGETIKD 441
MSCPHVSG+ LL+ HP+WSPAAI+SA+MTTA +N+G+ I D
Sbjct: 293 MSCPHVSGIVGLLKSLHPDWSPAAIRSAIMTTATTRNNNGDPILD 427
Score = 45.7 bits (94), Expect(2) = 3e-045
Identities = 17/29 (58%), Positives = 20/29 (68%)
Frame = +1 / +2
Query: 445 ATGVESTPFVRGAGHVDPNAALDPRLVYD 531
++ +TPF GAGHV PN A DP LVYD
Sbjct: 428 SSNTRATPFAYGAGHVQPNRAADPGLVYD 514
>gb|CF232498.1|CF232498 PtaJXO0011C12C1206 Poplar cDNA library from young opposite xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 772
Score = 120 bits (259), Expect(2) = 3e-043
Identities = 49/87 (56%), Positives = 64/87 (73%)
Frame = +1 / +1
Query: 274 RVEFNIISGTSMSCPHVSGLAALLRQAHPEWSPAAIKSALMTTAYNLDNSGETIKDLATG 453
+++FNI+SGTSMSCPH++G+A L++ HP WSP+AIKSA+MTTA LD SG+ I+ G
Sbjct: 142 KMQFNILSGTSMSCPHITGVATLIKAVHPSWSPSAIKSAIMTTATILDKSGKPIRVDPEG 321
Query: 454 VESTPFVRGAGHVDPNAALDPRLVYDA 534
+ F G+G VDP LDP LVYDA
Sbjct: 322 RMANAFDYGSGFVDPTRVLDPGLVYDA 402
Score = 76.7 bits (162), Expect(2) = 2e-023
Identities = 40/84 (47%), Positives = 49/84 (58%)
Frame = -1 / -3
Query: 533 ASYTSLGSRAALGST*PAPRTNGVDSTPVARSLMVSPELSRLYAVVMSADLIAAGLHSGC 354
AS T GSR +GST P P +N + P +LM P LSR+ AVVM ADL+A G G
Sbjct: 401 AS*TRPGSRTLVGSTNPDP*SNALAILPSGSTLMGLPLLSRMVAVVMIADLMADGDQDG* 222
Query: 353 AWRSSAARPLTCGQDMDVPEMMLN 282
A P+ CG D++VPE MLN
Sbjct: 221 TALIKVATPVMCGHDIEVPERMLN 150
Score = 74.0 bits (156), Expect(2) = 3e-043
Identities = 30/49 (61%), Positives = 37/49 (75%)
Frame = +1 / +1
Query: 118 SPSAPRVAAFSSRGPNYRAPEILKPDVIAPGVNILAAWTGAASPTDLDI 264
S APR+A+FSS+GPN PEILKPDV +PG+NILAAW+ AA +I
Sbjct: 13 SQPAPRIASFSSKGPNSLTPEILKPDVASPGLNILAAWSPAAGKMQFNI 159
Score = 51.2 bits (106), Expect(2) = 2e-023
Identities = 26/48 (54%), Positives = 28/48 (58%)
Frame = -1 / -3
Query: 269 ESMSRSVGEAAPVHAASMLTPGAMTSGLRISGAR*LGPRLENAATRGA 126
E M + AA AA M +PG TSG RISG R LGP EN A RGA
Sbjct: 164 ERMLNCIFPAAGDQAARMFSPGDATSGFRISGVRELGPLEENEAIRGA 21
>gb|AJ774151.1|AJ774151 AJ774151 Populus euphratica shoot 3-6 months Populus euphratica
cDNA clone P0000300013C09F1, mRNA sequence
Length = 527
Score = 155 bits (334), Expect(2) = 3e-043
Identities = 65/94 (69%), Positives = 75/94 (79%)
Frame = +1 / +3
Query: 127 APRVAAFSSRGPNYRAPEILKPDVIAPGVNILAAWTGAASPTDLDIDSRRVEFNIISGTS 306
AP +AAFSSRGP+ P+++KPDV APG+NILAAW SPT L D R V FN+ISGTS
Sbjct: 243 APMLAAFSSRGPSSVGPDVIKPDVTAPGMNILAAWPPMTSPTLLKSDKRSVLFNVISGTS 422
Query: 307 MSCPHVSGLAALLRQAHPEWSPAAIKSALMTTAY 408
MSCPHVSGLAALL+ + +W PAAIKSALMTTAY
Sbjct: 423 MSCPHVSGLAALLKSVYKKWPPAAIKSALMTTAY 524
Score = 39.8 bits (81), Expect(2) = 3e-043
Identities = 15/38 (39%), Positives = 24/38 (63%)
Frame = +1 / +3
Query: 1 HLVPATMVGQKFGDKIRYYVQTDPSPTATIVFRGTVIG 114
H++PAT +G G ++ Y+ + TA+I F+GTV G
Sbjct: 123 HVLPATSLGASAGMAVKEYMNSTKRATASIAFKGTVYG 236
>gb|CV253010.1|CV253010 PX0019.B21.1_N12 PT-X-FL-A-1 Populus trichocarpa cDNA clone
PX0019_N12 3', mRNA sequence
Length = 734
Score = 174 bits (377), Expect = 3e-043
Identities = 73/107 (68%), Positives = 85/107 (79%)
Frame = +1 / -3
Query: 223 AAWTGAASPTDLDIDSRRVEFNIISGTSMSCPHVSGLAALLRQAHPEWSPAAIKSALMTT 402
A W G+A T L D RRVEFNIISGTSMSCPHVSGLAAL++ AHP+WSPAAIKSALMTT
Sbjct: 732 AGWVGSAGLTGLATDGRRVEFNIISGTSMSCPHVSGLAALIKAAHPDWSPAAIKSALMTT 553
Query: 403 AYNLDNSGETIKDLATGVESTPFVRGAGHVDPNAALDPRLVYDAGSD 543
AY +G ++D+ATG +STPF GAGHVDP +AL+P LVYD +D
Sbjct: 552 AYVTYKNGNKLQDVATGKDSTPFDHGAGHVDPVSALNPGLVYDLTAD 412
Score = 121 bits (261), Expect = 2e-027
Identities = 65/108 (60%), Positives = 73/108 (67%)
Frame = -1 / +2
Query: 545 SSEPASYTSLGSRAALGST*PAPRTNGVDSTPVARSLMVSPELSRLYAVVMSADLIAAGL 366
SS S TS G A GST PAP +NGV+S PVA S + P L AVVMSADLIAAGL
Sbjct: 410 SSAVRS*TSPGLSAETGSTCPAP*SNGVESFPVATSCNLLPFL*VT*AVVMSADLIAAGL 589
Query: 365 HSGCAWRSSAARPLTCGQDMDVPEMMLNSTRLESMSRSVGEAAPVHAA 222
SG A +AARPLTCGQD++VPEMMLNSTRL S++ V A P A
Sbjct: 590 QSG*AALINAARPLTCGQDIEVPEMMLNSTRLPSVASPVRPAEPTQPA 733
>gb|CX659031.1|CX659031 PO01025F07 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO01025F07 5', mRNA sequence
Length = 704
Score = 119 bits (256), Expect(2) = 8e-043
Identities = 49/87 (56%), Positives = 63/87 (72%)
Frame = +1 / +3
Query: 274 RVEFNIISGTSMSCPHVSGLAALLRQAHPEWSPAAIKSALMTTAYNLDNSGETIKDLATG 453
R++FNI+SGTSMSCPHV+G+A L++ HP WSP+AIKSA+MTTA LD + E I+ G
Sbjct: 255 RMQFNILSGTSMSCPHVTGIATLVKAVHPSWSPSAIKSAIMTTATILDKNDEPIRVDPEG 434
Query: 454 VESTPFVRGAGHVDPNAALDPRLVYDA 534
+ F G+G VDP LDP L+YDA
Sbjct: 435 RRANSFDYGSGFVDPARVLDPGLIYDA 515
Score = 82.6 bits (175), Expect(2) = 5e-025
Identities = 41/78 (52%), Positives = 48/78 (61%)
Frame = -1 / -2
Query: 515 GSRAALGST*PAPRTNGVDSTPVARSLMVSPELSRLYAVVMSADLIAAGLHSGCAWRSSA 336
GSR GST P P +N + P +LM S LSR+ AVVM ADLIA G H G +
Sbjct: 496 GSRTLAGSTNPDP*SNELALLPSGSTLMGSSFLSRIVAVVMIADLIADGDHDGWTALTKV 317
Query: 335 ARPLTCGQDMDVPEMMLN 282
A P+TCG DM+VPE MLN
Sbjct: 316 AIPVTCGHDMEVPERMLN 263
Score = 74.0 bits (156), Expect(2) = 8e-043
Identities = 31/58 (53%), Positives = 39/58 (67%)
Frame = +1 / +3
Query: 91 VFRGTVIGKSPSAPRVAAFSSRGPNYRAPEILKPDVIAPGVNILAAWTGAASPTDLDI 264
+ R + S APR+A+FSS+GPN PEILKPDV APG+NILAAW+ A +I
Sbjct: 99 ISRAKTVLGSQPAPRIASFSSKGPNSLTPEILKPDVAAPGLNILAAWSPVAGRMQFNI 272
Score = 50.3 bits (104), Expect(2) = 5e-025
Identities = 25/48 (52%), Positives = 28/48 (58%)
Frame = -1 / -2
Query: 269 ESMSRSVGEAAPVHAASMLTPGAMTSGLRISGAR*LGPRLENAATRGA 126
E M + A AA M +PGA TSG +ISG R LGP EN A RGA
Sbjct: 277 ERMLNCILPATGDQAARMFSPGAATSGFKISGVRELGPLEENEAIRGA 134
>gb|BU896669.1|BU896669 X044A03 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 596
Score = 172 bits (372), Expect = 2e-042
Identities = 76/120 (63%), Positives = 86/120 (71%)
Frame = +1 / +2
Query: 127 APRVAAFSSRGPNYRAPEILKPDVIAPGVNILAAWTGAASPTDLDIDSRRVEFNIISGTS 306
AP +AAFSSRGP+ P+++KPDV APGVNILAAW SPT L D R V FN+ISGTS
Sbjct: 101 APLLAAFSSRGPSSVGPDVIKPDVTAPGVNILAAWPPMTSPTLLKSDKRSVLFNVISGTS 280
Query: 307 MSCPHVSGLAALLRQAHPEWSPAAIKSALMTTAYNLDNSGETIKDLATGVESTPFVRGAG 486
MSCPHVSGLAALL+ H WSPAAIKSALMTTAY DN G I D A+ ++ G G
Sbjct: 281 MSCPHVSGLAALLKSVHKTWSPAAIKSALMTTAYATDNRGSPIADAASSNSASATPFGFG 460
Score = 110 bits (237), Expect(2) = 9e-027
Identities = 61/107 (57%), Positives = 69/107 (64%)
Frame = -1 / -3
Query: 446 ARSLMVSPELSRLYAVVMSADLIAAGLHSGCAWRSSAARPLTCGQDMDVPEMMLNSTRLE 267
A S + P LS AVV+SADLIAAG H SSAARPLT GQD++VPE+ LN+T L
Sbjct: 420 AASAIGDPLLSVA*AVVISADLIAAGDHVLWTDLSSAARPLT*GQDIEVPEITLNNTLLL 241
Query: 266 SMSRSVGEAAPVHAASMLTPGAMTSGLRISGAR*LGPRLENAATRGA 126
S+ VG HAA M TPGA+TSGL SG LGP ENAA GA
Sbjct: 240 SLLSRVGLVIGGHAAKMFTPGAVTSGLITSGPTELGPLDENAANNGA 100
Score = 28.0 bits (55), Expect(2) = 9e-027
Identities = 14/28 (50%), Positives = 15/28 (53%)
Frame = -1 / -3
Query: 545 SSEPASYTSLGSRAALGST*PAPRTNGV 462
SS SY + GS A GST P P GV
Sbjct: 525 SSMVMSYINPGSEALSGSTWPEPNPKGV 442
>gb|BU897532.1|BU897532 X059C02 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 620
Score = 172 bits (372), Expect = 2e-042
Identities = 76/120 (63%), Positives = 86/120 (71%)
Frame = +1 / +2
Query: 127 APRVAAFSSRGPNYRAPEILKPDVIAPGVNILAAWTGAASPTDLDIDSRRVEFNIISGTS 306
AP +AAFSSRGP+ P+++KPDV APGVNILAAW SPT L D R V FN+ISGTS
Sbjct: 62 APLLAAFSSRGPSSVGPDVIKPDVTAPGVNILAAWPPMTSPTLLKSDKRSVLFNVISGTS 241
Query: 307 MSCPHVSGLAALLRQAHPEWSPAAIKSALMTTAYNLDNSGETIKDLATGVESTPFVRGAG 486
MSCPHVSGLAALL+ H WSPAAIKSALMTTAY DN G I D A+ ++ G G
Sbjct: 242 MSCPHVSGLAALLKSVHKTWSPAAIKSALMTTAYATDNRGSPIADAASSNSASATPFGFG 421
Score = 110 bits (237), Expect(2) = 4e-025
Identities = 61/107 (57%), Positives = 69/107 (64%)
Frame = -1 / -3
Query: 446 ARSLMVSPELSRLYAVVMSADLIAAGLHSGCAWRSSAARPLTCGQDMDVPEMMLNSTRLE 267
A S + P LS AVV+SADLIAAG H SSAARPLT GQD++VPE+ LN+T L
Sbjct: 381 AASAIGDPLLSVA*AVVISADLIAAGDHVLWTDLSSAARPLT*GQDIEVPEITLNNTLLL 202
Query: 266 SMSRSVGEAAPVHAASMLTPGAMTSGLRISGAR*LGPRLENAATRGA 126
S+ VG HAA M TPGA+TSGL SG LGP ENAA GA
Sbjct: 201 SLLSRVGLVIGGHAAKMFTPGAVTSGLITSGPTELGPLDENAANNGA 61
Score = 22.5 bits (43), Expect(2) = 4e-025
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = -1 / -3
Query: 524 TSLGSRAALGST*PAPRTNGV 462
++L S A GST P P GV
Sbjct: 465 STLDSEALSGSTWPEPNPKGV 403
>gb|DN496270.1|DN496270 P052C04.5pR Populus petioles cDNA library Populus tremula cDNA
clone P052C04 5', mRNA sequence
Length = 856
Score = 157 bits (340), Expect(2) = 1e-041
Identities = 67/94 (71%), Positives = 75/94 (79%)
Frame = +1 / +1
Query: 127 APRVAAFSSRGPNYRAPEILKPDVIAPGVNILAAWTGAASPTDLDIDSRRVEFNIISGTS 306
AP VA+FSSRGP+ +P+ILKPDV APGV ILAAW SPT L D RRV N SGTS
Sbjct: 418 APVVASFSSRGPSPISPDILKPDVTAPGVTILAAWPAKTSPTLLPFDDRRVNRNFQSGTS 597
Query: 307 MSCPHVSGLAALLRQAHPEWSPAAIKSALMTTAY 408
MSCPHVSG+ ALL+ AHP+WSPAAI+SALMTTAY
Sbjct: 598 MSCPHVSGVVALLKSAHPDWSPAAIRSALMTTAY 699
Score = 99.5 bits (212), Expect = 1e-020
Identities = 52/99 (52%), Positives = 63/99 (63%)
Frame = -1 / -3
Query: 422 ELSRLYAVVMSADLIAAGLHSGCAWRSSAARPLTCGQDMDVPEMMLNSTRLESMSRSVGE 243
+L +YAVV+ ADL+AAG SG A SA P T G D+DVP+ TR S +VGE
Sbjct: 713 KLPFVYAVVIRADLMAAGDQSG*ADLRSATTPDT*GHDIDVPD*KFRFTRRSSNGNNVGE 534
Query: 242 AAPVHAASMLTPGAMTSGLRISGAR*LGPRLENAATRGA 126
HAA+M+TPGA+TSGLR+SG LGP E AT GA
Sbjct: 533 VLAGHAANMVTPGAVTSGLRMSGEIGLGPLEEKDATTGA 417
Score = 32.1 bits (64), Expect(2) = 1e-041
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +1 / +2
Query: 460 STPFVRGAGHVDPNAALDPRL 522
S PF GAGH+ P+ A+DP L
Sbjct: 713 SDPFDIGAGHIHPSKAMDPGL 775
>gb|DT481857.1|DT481857 WS02533.BR_C12 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02533_C12 5', mRNA sequence
Length = 581
Score = 109 bits (235), Expect(2) = 1e-040
Identities = 47/87 (54%), Positives = 60/87 (68%)
Frame = +1 / +2
Query: 274 RVEFNIISGTSMSCPHVSGLAALLRQAHPEWSPAAIKSALMTTAYNLDNSGETIKDLATG 453
+++FNI+SGTSMSCPH++G+A L++ HP WSP+AIKSA+MTTA LD S I+ G
Sbjct: 317 KMQFNILSGTSMSCPHITGVATLIKAVHPSWSPSAIKSAIMTTATILDKSV*PIRVDPEG 496
Query: 454 VESTPFVRGAGHVDPNAALDPRLVYDA 534
F G+G VDP LDP L YDA
Sbjct: 497 RMPNVFDYGSGFVDPTRVLDPGLGYDA 577
Score = 76.3 bits (161), Expect(2) = 1e-040
Identities = 32/58 (55%), Positives = 40/58 (68%)
Frame = +1 / +2
Query: 91 VFRGTVIGKSPSAPRVAAFSSRGPNYRAPEILKPDVIAPGVNILAAWTGAASPTDLDI 264
+ R + S APR+A+FSS+GPN PEILKPDV APG+NILAAW+ AA +I
Sbjct: 161 ISRAKTVLGSQPAPRIASFSSKGPNSLTPEILKPDVAAPGLNILAAWSPAAGKMQFNI 334
Score = 69.4 bits (146), Expect(2) = 4e-022
Identities = 36/78 (46%), Positives = 45/78 (57%)
Frame = -1 / -3
Query: 515 GSRAALGST*PAPRTNGVDSTPVARSLMVSPELSRLYAVVMSADLIAAGLHSGCAWRSSA 336
GSR +GST P P +N + P +LM LSR+ AVVM ADL+A G G
Sbjct: 558 GSRTLVGSTNPDP*SNTLGILPSGSTLMG*TLLSRIVAVVMIADLMADGDQDG*TALIKV 379
Query: 335 ARPLTCGQDMDVPEMMLN 282
A P+ CG D++VPE MLN
Sbjct: 378 ATPVMCGHDIEVPERMLN 325
Score = 53.9 bits (112), Expect(2) = 4e-022
Identities = 27/48 (56%), Positives = 29/48 (60%)
Frame = -1 / -3
Query: 269 ESMSRSVGEAAPVHAASMLTPGAMTSGLRISGAR*LGPRLENAATRGA 126
E M + AA AA M +PGA TSG RISG R LGP EN A RGA
Sbjct: 339 ERMLNCIFPAAGDQAARMFSPGAATSGFRISGVRELGPLEENEAIRGA 196
>gb|AJ776226.1|AJ776226 AJ776226 Populus euphratica root 3-6 months Populus euphratica cDNA
clone P0000400010F06F1, mRNA sequence
Length = 466
Score = 122 bits (263), Expect(3) = 2e-040
Identities = 52/76 (68%), Positives = 59/76 (77%)
Frame = +1 / +2
Query: 289 IISGTSMSCPHVSGLAALLRQAHPEWSPAAIKSALMTTAYNLDNSGETIKDLATGVESTP 468
I GTSM+CPHVSGLAALL+ AHPEWSPAAI+SALMTTAY +DN G T+ D +TG ST
Sbjct: 194 IAPGTSMACPHVSGLAALLKAAHPEWSPAAIRSALMTTAYTVDNRGGTMLDESTGNVSTV 373
Query: 469 FVRGAGHVDPNAALDP 516
GAGHV P A+DP
Sbjct: 374 LDFGAGHVHPQKAMDP 421
Score = 53.9 bits (112), Expect(3) = 2e-040
Identities = 21/31 (67%), Positives = 27/31 (87%)
Frame = +1 / +2
Query: 127 APRVAAFSSRGPNYRAPEILKPDVIAPGVNI 219
AP V++FS+RGPN +PEILKPDVIAPG ++
Sbjct: 122 APVVSSFSARGPNPESPEILKPDVIAPGTSM 214
Score = 27.1 bits (53), Expect(3) = 2e-040
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +1 / +2
Query: 76 PTATIVFRGTVIGKSPS 126
PTATIVF+GT + P+
Sbjct: 74 PTATIVFKGTRVNVRPA 124
>gb|CX172775.1|CX172775 G02_69-61_14.ab1 leaf inoculated with Marssonia pathogen of Populus
deltoides Populus deltoides cDNA, mRNA sequence
Length = 710
Score = 123 bits (264), Expect(2) = 8e-040
Identities = 50/73 (68%), Positives = 60/73 (82%)
Frame = +1 / +1
Query: 127 APRVAAFSSRGPNYRAPEILKPDVIAPGVNILAAWTGAASPTDLDIDSRRVEFNIISGTS 306
+P VAAFSSRGPN EILKPD+I PGVNILAAW+ PT L+ D+R+ +FNI+SGTS
Sbjct: 490 SPVVAAFSSRGPNLVTREILKPDLIGPGVNILAAWSETIGPTGLETDTRKTQFNIMSGTS 669
Query: 307 MSCPHVSGLAALL 345
MSCPH+SG+AALL
Sbjct: 670 MSCPHISGVAALL 708
Score = 60.3 bits (126), Expect(2) = 8e-040
Identities = 24/42 (57%), Positives = 31/42 (73%)
Frame = +1 / +1
Query: 1 HLVPATMVGQKFGDKIRYYVQTDPSPTATIVFRGTVIGKSPS 126
HL+PA VG+K GD IR YV++DP+PTA + F GTV+ PS
Sbjct: 367 HLLPAVAVGRKVGDVIREYVKSDPNPTAVLSFGGTVLDVRPS 492
>gb|CA929195.1|CA929195 MTU2CA.P10.C04 Aspen apex cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 470
Score = 157 bits (339), Expect = 5e-038
Identities = 69/96 (71%), Positives = 75/96 (78%)
Frame = +1 / -2
Query: 256 LDIDSRRVEFNIISGTSMSCPHVSGLAALLRQAHPEWSPAAIKSALMTTAYNLDNSGETI 435
L D R V FNIISGTSMSCPHVSGLAAL++ AH +WSPAAIKSALMTTAY +GE I
Sbjct: 466 LTSDKRHVSFNIISGTSMSCPHVSGLAALIKAAHQDWSPAAIKSALMTTAYATYKNGENI 287
Query: 436 KDLATGVESTPFVRGAGHVDPNAALDPRLVYDAGSD 543
D+ATG STPF GAGHV+P AALDP LVYDA D
Sbjct: 286 LDVATGQPSTPFDFGAGHVNPVAALDPGLVYDASVD 179
Score = 104 bits (222), Expect = 4e-022
Identities = 57/95 (60%), Positives = 63/95 (66%)
Frame = -1 / +3
Query: 545 SSEPASYTSLGSRAALGST*PAPRTNGVDSTPVARSLMVSPELSRLYAVVMSADLIAAGL 366
SS AS T GSRAA G T PAP++NGVD PVA S M SP L AVVM ADL+AAGL
Sbjct: 177 SSTEAS*TRPGSRAATGFTCPAPKSNGVDGCPVATSNMFSPFLYVA*AVVMRADLMAAGL 356
Query: 365 HSGCAWRSSAARPLTCGQDMDVPEMMLNSTRLESM 261
S A SAA PLT G D+DVPEM+L T L S+
Sbjct: 357 QSW*AALMSAANPLT*GHDIDVPEMILKLTCLLSL 461
>gb|BU821162.1|BU821162 UB19CPH06 Populus tremula cambium cDNA library Populus tremula cDNA
5 prime, mRNA sequence
Length = 449
Score = 155 bits (336), Expect = 1e-037
Identities = 63/105 (60%), Positives = 79/105 (75%)
Frame = +1 / +1
Query: 127 APRVAAFSSRGPNYRAPEILKPDVIAPGVNILAAWTGAASPTDLDIDSRRVEFNIISGTS 306
AP +A+FSSRGPN ILKPD+ APGV+++AA+T A PTD D RR+ FN SGTS
Sbjct: 103 APSMASFSSRGPNILEESILKPDITAPGVSVIAAFTLATGPTDAAYDKRRIPFNTESGTS 282
Query: 307 MSCPHVSGLAALLRQAHPEWSPAAIKSALMTTAYNLDNSGETIKD 441
MSCPHVSG+ LL+ HP+WSPAAI+SA+MTTA +N+G+ I D
Sbjct: 283 MSCPHVSGIVGLLKSLHPDWSPAAIRSAIMTTATTRNNNGDPILD 417
>gb|CK103636.1|CK103636 G124P92.5pR Populus tension wood cDNA library Populus tremula x
Populus tremuloides cDNA clone G124P92 5', mRNA sequence
Length = 555
Score = 95.4 bits (203), Expect(2) = 2e-036
Identities = 35/55 (63%), Positives = 47/55 (85%)
Frame = +1 / +3
Query: 274 RVEFNIISGTSMSCPHVSGLAALLRQAHPEWSPAAIKSALMTTAYNLDNSGETIK 438
++EFNI+SGTSMSCPH++G+A L++ HP WSP+AIKSA+MTTA LD SG+ I+
Sbjct: 261 KIEFNILSGTSMSCPHITGVATLIKAVHPSWSPSAIKSAIMTTATILDKSGKPIR 425
Score = 76.7 bits (162), Expect(2) = 2e-036
Identities = 32/56 (57%), Positives = 40/56 (71%)
Frame = +1 / +3
Query: 97 RGTVIGKSPSAPRVAAFSSRGPNYRAPEILKPDVIAPGVNILAAWTGAASPTDLDI 264
R + S APR+A+FSS+GPN PEILKPDV APG+NILAAW+ AA + +I
Sbjct: 111 RAKTVLGSQPAPRIASFSSKGPNSLTPEILKPDVAAPGLNILAAWSPAAGKIEFNI 278
>gb|BI131738.1|BI131738 G124P92Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 456
Score = 95.4 bits (203), Expect(2) = 3e-036
Identities = 35/55 (63%), Positives = 47/55 (85%)
Frame = +1 / +2
Query: 274 RVEFNIISGTSMSCPHVSGLAALLRQAHPEWSPAAIKSALMTTAYNLDNSGETIK 438
++EFNI+SGTSMSCPH++G+A L++ HP WSP+AIKSA+MTTA LD SG+ I+
Sbjct: 263 KIEFNILSGTSMSCPHITGVATLIKAVHPSWSPSAIKSAIMTTATILDKSGKPIR 427
Score = 76.3 bits (161), Expect(2) = 3e-036
Identities = 32/58 (55%), Positives = 41/58 (70%)
Frame = +1 / +2
Query: 91 VFRGTVIGKSPSAPRVAAFSSRGPNYRAPEILKPDVIAPGVNILAAWTGAASPTDLDI 264
+ R + S APR+A+FSS+GPN PEILKPDV APG+NILAAW+ AA + +I
Sbjct: 107 ISRAKTVLGSQPAPRMASFSSKGPNSLTPEILKPDVAAPGLNILAAWSPAAGKIEFNI 280
>gb|CK116749.1|CK116749 B016P65 Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA clone B016P65 5', mRNA sequence
Length = 400
Score = 141 bits (304), Expect(2) = 3e-036
Identities = 55/80 (68%), Positives = 67/80 (83%)
Frame = +1 / +1
Query: 130 PRVAAFSSRGPNYRAPEILKPDVIAPGVNILAAWTGAASPTDLDIDSRRVEFNIISGTSM 309
P V++FS+RGPN +PEILKPDVIAPG+NILAAW P+ + D R++EFNI+SGTSM
Sbjct: 34 PVVSSFSARGPNPESPEILKPDVIAPGLNILAAWPDKIGPSGIPSDKRKIEFNILSGTSM 213
Query: 310 SCPHVSGLAALLRQAHPEWS 369
+CPHVSGLAALL+ AHPEWS
Sbjct: 214 ACPHVSGLAALLKAAHPEWS 273
Score = 29.8 bits (59), Expect(2) = 3e-036
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +1 / +1
Query: 382 KSALMTTAYNLDNSGETIKD 441
K LMTTAY +DN G T+ D
Sbjct: 283 KVGLMTTAYTVDNRGGTMLD 342
>gb|DV464839.1|DV464839 MTUNUL1.P31.D11 NUL Populus fremontii x Populus angustifolia cDNA,
mRNA sequence
Length = 811
Score = 91.3 bits (194), Expect(3) = 6e-035
Identities = 35/57 (61%), Positives = 47/57 (82%)
Frame = +1 / +3
Query: 283 FNIISGTSMSCPHVSGLAALLRQAHPEWSPAAIKSALMTTAYNLDNSGETIKDLATG 453
FNI+SGTSM+CPH +G AALLR+AHP+WSPA I+SA+MTTA +D++ + I D+ G
Sbjct: 408 FNILSGTSMACPHAAGAAALLRKAHPDWSPATIRSAMMTTADIMDHTMKPINDIGFG 578
Score = 52.1 bits (108), Expect(3) = 6e-035
Identities = 19/36 (52%), Positives = 26/36 (72%)
Frame = +1 / +3
Query: 124 SAPRVAAFSSRGPNYRAPEILKPDVIAPGVNILAAW 231
SAP V +SSRGP+ P ++KPD++ PG ILA+W
Sbjct: 249 SAPSVTGYSSRGPSTSCPLVMKPDIMTPGSLILASW 356
Score = 41.6 bits (85), Expect(3) = 6e-035
Identities = 15/28 (53%), Positives = 20/28 (71%)
Frame = +1 / +3
Query: 460 STPFVRGAGHVDPNAALDPRLVYDAGSD 543
++P GAG V+PN ALDP L+YD S+
Sbjct: 594 ASPLAMGAGQVNPNKALDPGLIYDVNSN 677
>gb|BU829210.1|BU829210 K036P64P Populus apical shoot cDNA library Populus tremula x
Populus tremuloides cDNA 5 prime, mRNA sequence
Length = 591
Score = 146 bits (315), Expect = 1e-034
Identities = 59/87 (67%), Positives = 70/87 (80%)
Frame = +1 / +2
Query: 271 RRVEFNIISGTSMSCPHVSGLAALLRQAHPEWSPAAIKSALMTTAYNLDNSGETIKDLAT 450
RRV+FNI+SGTSMSCPHVSG+AALL+ HPEWSPAAIKSALMTTAY DN+ +KD +
Sbjct: 5 RRVKFNILSGTSMSCPHVSGIAALLKARHPEWSPAAIKSALMTTAYVHDNTHNPLKDASA 184
Query: 451 GVESTPFVRGAGHVDPNAALDPRLVYD 531
STP+ GAGH++P ALDP L+YD
Sbjct: 185 TTPSTPYDHGAGHINPMKALDPGLIYD 265
>gb|CV260290.1|CV260290 WS02013.B21_K19 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02013_K19 3', mRNA sequence
Length = 883
Score = 120 bits (259), Expect(2) = 1e-033
Identities = 48/87 (55%), Positives = 70/87 (80%)
Frame = +1 / -2
Query: 181 ILKPDVIAPGVNILAAWTGAASPTDLDIDSRRVEFNIISGTSMSCPHVSGLAALLRQAHP 360
+LKPD++APG +LA+W+ +S ++ S +FN++SGTSM+ PHV+G+AAL+++AHP
Sbjct: 867 VLKPDLLAPGTLVLASWSPISSVAEVRSHSLFSKFNLLSGTSMATPHVAGVAALIKKAHP 688
Query: 361 EWSPAAIKSALMTTAYNLDNSGETIKD 441
+WSPAAI+SALMTTA +LDN+ IKD
Sbjct: 687 DWSPAAIRSALMTTADSLDNTLSPIKD 607
Score = 41.6 bits (85), Expect(2) = 1e-033
Identities = 14/28 (50%), Positives = 22/28 (78%)
Frame = +1 / -2
Query: 460 STPFVRGAGHVDPNAALDPRLVYDAGSD 543
+TP G+GH++PN +LDP L+YDA ++
Sbjct: 585 ATPIDIGSGHINPNKSLDPGLIYDATAE 502
>gb|CN518865.1|CN518865 GQ0101.B3_M23 GQ010 Populus trichocarpa x Populus deltoides cDNA
clone GQ0101_M23 5', mRNA sequence
Length = 631
Score = 120 bits (259), Expect(2) = 1e-033
Identities = 48/87 (55%), Positives = 70/87 (80%)
Frame = +1 / +3
Query: 181 ILKPDVIAPGVNILAAWTGAASPTDLDIDSRRVEFNIISGTSMSCPHVSGLAALLRQAHP 360
+LKPD++APG +LA+W+ +S ++ S +FN++SGTSM+ PHV+G+AAL+++AHP
Sbjct: 24 VLKPDLLAPGTLVLASWSPISSVAEVRSHSLFSKFNLLSGTSMATPHVAGVAALIKKAHP 203
Query: 361 EWSPAAIKSALMTTAYNLDNSGETIKD 441
+WSPAAI+SALMTTA +LDN+ IKD
Sbjct: 204 DWSPAAIRSALMTTADSLDNTLSPIKD 284
Score = 41.6 bits (85), Expect(2) = 1e-033
Identities = 14/28 (50%), Positives = 22/28 (78%)
Frame = +1 / +3
Query: 460 STPFVRGAGHVDPNAALDPRLVYDAGSD 543
+TP G+GH++PN +LDP L+YDA ++
Sbjct: 306 ATPIDIGSGHINPNKSLDPGLIYDATAE 389
Database: Populus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:49 PM
Number of letters in database: 203,408,664
Number of sequences in database: 369,679
Lambda K H
0.316 0.132 0.393
Matrix: BLOSUM62
Number of Hits to DB: 158,895,546
Number of Sequences: 369679
Number of extensions: 1446879
Number of successful extensions: 29335
Number of sequences better than 1.0e-020: 110
length of database: 67,802,888
effective HSP length: 52
effective length of database: 48,579,580
effective search space used: 6266765820
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.6 bits)