TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 5704580.2.1
(721 letters)
Database: Populus_nucl_with_EST.fasta
369,679 sequences; 203,408,664 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CV267067.1|CV267067 WS02030.B21_L22 PTxN-IB-N-A-11 Popul... 299 1e-080
gb|CX176316.1|CX176316 A01_69-22_01.ab1 leaf inoculated wit... 299 1e-080
gb|DT507040.1|DT507040 WS02417.BR_D03 PTxD-ICC-N-A-14 Popul... 293 9e-079
gb|DT511702.1|DT511702 WS02417.B21_D03 PTxD-ICC-N-A-14 Popu... 293 9e-079
gb|DT519107.1|DT519107 WS02440.B21_E15 PTxD-ICC-N-A-14 Popu... 293 9e-079
gb|DT511227.1|DT511227 WS02429.BR_O08 PTxD-ICC-N-A-14 Popul... 254 3e-067
gb|DT515921.1|DT515921 WS02429.B21.1_O08 PTxD-ICC-N-A-14 Po... 254 3e-067
gb|BI129397.1|BI129397 G090P20Y Populus cambium cDNA librar... 243 7e-064
gb|CK102756.1|CK102756 G090P20.5pR Populus tension wood cDN... 96 5e-038
gb|CX656397.1|CX656397 PO01001C04 Poplar SC cDNA library Po... 133 9e-031
gb|CV228477.1|CV228477 WS01910.B21_E04 PT-DX-N-A-10 Populus... 130 1e-029
>gb|CV267067.1|CV267067 WS02030.B21_L22 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02030_L22 3', mRNA sequence
Length = 889
Score = 299 bits (647), Expect = 1e-080
Identities = 122/145 (84%), Positives = 138/145 (95%)
Frame = -3 / -3
Query: 692 VEACIEETIVVYVDHLLSQKNYIKEETIERMRLDEEVLMDFFREHINVTKVESRVRILAD 513
VEAC+EET+VVYVDHLL+Q+NYIKEETIERMRLDEEV+MDFFRE+I V+KVESRVRIL+D
Sbjct: 740 VEACLEETMVVYVDHLLTQRNYIKEETIERMRLDEEVIMDFFREYITVSKVESRVRILSD 561
Query: 512 MRELASAESLDSFTLIYTNILEHQPDCPPEVFYKLVAMREGIPKKEAKEVVQECKEIYEN 333
+RELASAESLDSFTLIYTNILEHQPDCPPEV KLV +REGIP+K+AKEV+QECKEIYEN
Sbjct: 560 LRELASAESLDSFTLIYTNILEHQPDCPPEVVEKLVGLREGIPRKDAKEVMQECKEIYEN 381
Query: 332 SLVDGNPQKSGFVFGKLKCLTAKKG 258
SLVDGNP K+GF+F K+KCLTA KG
Sbjct: 380 SLVDGNPAKAGFLFPKVKCLTASKG 306
Score = 169 bits (363), Expect = 2e-041
Identities = 72/148 (48%), Positives = 95/148 (64%)
Frame = +3 / +3
Query: 249 PPYAFLCCQALQFAKHKTGLLRVAIHKRVLVYLFAFLYNLLGFLFWNAFPHCHKLIKNLR 428
P +F CQ L K KT L V+I+K +L+YLFA L+NL L W AF +KL N R
Sbjct: 297 PERSFGSCQTLHLRKKKTSLCGVSINK*ILIYLFALLHNLFRILPWYAFSQSNKLFNNFR 476
Query: 429 RAIRLMFQYISVNESKAIQTLS*S*LPHICQNPHSAFNFCHVDVFPEEIHKHLFI*PHPL 608
RA+ LMF+ I ++E + IQTL *S I Q P S F F H D+ PEE+H +LFI*PHP
Sbjct: 477 RAVGLMFKNICIDECEGIQTLC*SKFSQITQYPDSTFYFRHCDILPEEVHNNLFI*PHPF 656
Query: 609 YRFFFYVVFLRKEMVNIDHNCFLYASLH 692
Y F YVV L ++++N++H+CFL S +
Sbjct: 657 YCLFLYVVSLSQKVINVNHHCFLKTSFN 740
Score = 146 bits (314), Expect = 1e-034
Identities = 77/145 (53%), Positives = 79/145 (54%)
Frame = +1 / +1
Query: 259 PFFAVKHFNLPNTKPDF*GLPSTSEFSYISLHSCTTSLASFFGMPSRIATSL*KTSGGQS 438
P AVKHF KP F G PSTSEFSYISLHSC TS ASF GMPSR TS TSGGQS
Sbjct: 307 PLEAVKHFTFGKRKPAFAGFPSTSEFSYISLHSCITSFASFRGMPSRSPTSFSTTSGGQS 486
Query: 439 G*CSSILV*MRVXXXXXXXXXXXXXXXXXXTLLSTFVTLMCXXXXXXXXXXXXXXXXXXX 618
G*CS I V*M V TLLST T++
Sbjct: 487 G*CSRIFV*MSVKESKLSAEASSLKSLSIRTLLSTLDTVIYSLKKSIITSSSSLIRSIVS 666
Query: 619 XFM*FF*ERRWST*TTIVSSMQAST 693
FM*F * RR ST*TTIVSS QAST
Sbjct: 667 SFM*FL*VRR*ST*TTIVSSRQAST 741
Score = 110 bits (234), Expect = 1e-023
Identities = 64/145 (44%), Positives = 79/145 (54%)
Frame = -2 / -2
Query: 693 CGGLHRGNNCGLC*PSPFSEKLHKXXXXXXXXXXXRGAYGFLQGTHQRDKS*KQSADSGR 514
C L GNN GL * SEKLHK RG YG LQG + S K S D+
Sbjct: 741 C*SLS*GNNGGLR*SPSDSEKLHKGRDNRTDEAR*RGYYGLLQGVYHSV*SRK*SPDTE* 562
Query: 513 YEGASFS*EFG*LYSHLH*YTGTST*LPA*GFL*ACGNAGRHSKKGSQGGCTRMQRDIRE 334
+E FS EFG L++HL+ Y+ TST LPA* AC A RH+ +G + G R+QRDI E
Sbjct: 561 FERTCFSREFGFLHTHLYKYS*TSTRLPA*SC*KACWTARRHTTEGCERGYARVQRDI*E 382
Query: 333 LACGWQPSEVRFCVWQIEVLDSKER 259
C W+P + F + EV DS +R
Sbjct: 381 FTC*WKPRKGWFSFSEGEVFDSFQR 307
>gb|CX176316.1|CX176316 A01_69-22_01.ab1 leaf inoculated with Marssonia pathogen of Populus
deltoides Populus deltoides cDNA, mRNA sequence
Length = 579
Score = 299 bits (647), Expect = 1e-080
Identities = 122/145 (84%), Positives = 138/145 (95%)
Frame = -3 / +3
Query: 692 VEACIEETIVVYVDHLLSQKNYIKEETIERMRLDEEVLMDFFREHINVTKVESRVRILAD 513
VEAC+EET+VVYVDHLL+Q+NYIKEETIERMRLDEEV+MDFFRE+I V+KVESRVRIL+D
Sbjct: 48 VEACLEETMVVYVDHLLTQRNYIKEETIERMRLDEEVIMDFFREYITVSKVESRVRILSD 227
Query: 512 MRELASAESLDSFTLIYTNILEHQPDCPPEVFYKLVAMREGIPKKEAKEVVQECKEIYEN 333
+RELASAESLDSFTLIYTNILEHQPDCPPEV KLV +REGIP+K+AKEV+QECKEIYEN
Sbjct: 228 LRELASAESLDSFTLIYTNILEHQPDCPPEVVEKLVGLREGIPRKDAKEVMQECKEIYEN 407
Query: 332 SLVDGNPQKSGFVFGKLKCLTAKKG 258
SLVDGNP K+GF+F K+KCLTA KG
Sbjct: 408 SLVDGNPAKAGFLFPKVKCLTASKG 482
Score = 168 bits (361), Expect = 4e-041
Identities = 72/148 (48%), Positives = 95/148 (64%)
Frame = +3 / -2
Query: 249 PPYAFLCCQALQFAKHKTGLLRVAIHKRVLVYLFAFLYNLLGFLFWNAFPHCHKLIKNLR 428
P +F CQ L K KT L V+I+K +L+YLFA L+NL L W AF +KL N R
Sbjct: 491 PERSFGSCQTLHLRKKKTSLCGVSINK*ILIYLFALLHNLFRILPWYAFSQSNKLFNNFR 312
Query: 429 RAIRLMFQYISVNESKAIQTLS*S*LPHICQNPHSAFNFCHVDVFPEEIHKHLFI*PHPL 608
A+ LMF+ I ++ES+ IQTL *S I Q P S F F H D+ PEE+H +LFI*PHP
Sbjct: 311 WAVGLMFENICIDESEGIQTLC*SKFSQITQYPDSTFYFRHCDILPEEVHNNLFI*PHPF 132
Query: 609 YRFFFYVVFLRKEMVNIDHNCFLYASLH 692
Y F YVV L ++++N++H+CFL S +
Sbjct: 131 YCLFLYVVSLSQKVINVNHHCFLKTSFN 48
Score = 149 bits (320), Expect = 2e-035
Identities = 78/145 (53%), Positives = 80/145 (55%)
Frame = +1 / -3
Query: 259 PFFAVKHFNLPNTKPDF*GLPSTSEFSYISLHSCTTSLASFFGMPSRIATSL*KTSGGQS 438
P AVKHF KP F G PSTSEFSYISLHSC TS ASF GMPSR TS TSGGQS
Sbjct: 481 PLEAVKHFTFGKRKPAFAGFPSTSEFSYISLHSCITSFASFRGMPSRSPTSFSTTSGGQS 302
Query: 439 G*CSSILV*MRVXXXXXXXXXXXXXXXXXXTLLSTFVTLMCXXXXXXXXXXXXXXXXXXX 618
G*CS I V*MRV TLLST T++
Sbjct: 301 G*CSRIFV*MRVKESKLSAEASSLKSLSIRTLLSTLDTVIYSLKKSIITSSSSLIRSIVS 122
Query: 619 XFM*FF*ERRWST*TTIVSSMQAST 693
FM*F * RR ST*TTIVSS QAST
Sbjct: 121 SFM*FL*VRR*ST*TTIVSSRQAST 47
Score = 110 bits (235), Expect = 9e-024
Identities = 64/145 (44%), Positives = 78/145 (53%)
Frame = -2 / +2
Query: 693 CGGLHRGNNCGLC*PSPFSEKLHKXXXXXXXXXXXRGAYGFLQGTHQRDKS*KQSADSGR 514
C L GNN GL * SEKLHK RG YG LQG + S K S D+
Sbjct: 47 C*SLS*GNNGGLR*SPSDSEKLHKGRDNRTDEAR*RGYYGLLQGVYHSV*SRK*SPDTE* 226
Query: 513 YEGASFS*EFG*LYSHLH*YTGTST*LPA*GFL*ACGNAGRHSKKGSQGGCTRMQRDIRE 334
+E FS EFG L+SHL+ Y+ TST LP * AC A RH+ +G + G R+QRDI E
Sbjct: 227 FERTCFSREFGFLHSHLYKYSRTSTRLPT*SC*KACWTARRHTTEGCERGYARVQRDI*E 406
Query: 333 LACGWQPSEVRFCVWQIEVLDSKER 259
C W+P + F + EV DS +R
Sbjct: 407 FTC*WKPRKGWFSFSEGEVFDSFQR 481
>gb|DT507040.1|DT507040 WS02417.BR_D03 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02417_D03 5', mRNA sequence
Length = 887
Score = 293 bits (634), Expect = 9e-079
Identities = 119/145 (82%), Positives = 135/145 (93%)
Frame = -3 / +3
Query: 692 VEACIEETIVVYVDHLLSQKNYIKEETIERMRLDEEVLMDFFREHINVTKVESRVRILAD 513
VEAC+EET+VVYVDHLL+QKNYIKEETIERMRLDEEV+MDFFRE+I+V+KVESRVRIL+D
Sbjct: 333 VEACLEETVVVYVDHLLTQKNYIKEETIERMRLDEEVIMDFFREYISVSKVESRVRILSD 512
Query: 512 MRELASAESLDSFTLIYTNILEHQPDCPPEVFYKLVAMREGIPKKEAKEVVQECKEIYEN 333
++ELAS ESLD+FTLIY NILEHQPDCPPEV KLV +REGIP+K+AKEVVQECKEIYEN
Sbjct: 513 LKELASGESLDTFTLIYMNILEHQPDCPPEVVEKLVGLREGIPRKDAKEVVQECKEIYEN 692
Query: 332 SLVDGNPQKSGFVFGKLKCLTAKKG 258
SLVDGNP K+GF+F KLKC A KG
Sbjct: 693 SLVDGNPAKAGFLFPKLKCFAASKG 767
Score = 166 bits (357), Expect = 1e-040
Identities = 74/157 (47%), Positives = 100/157 (63%)
Frame = +3 / -1
Query: 222 SSPHLLPKLPPYAFLCCQALQFAKHKTGLLRVAIHKRVLVYLFAFLYNLLGFLFWNAFPH 401
S+P L P +F C+ALQ K KT L V+I+K +L+ LFA LYNL L W AF
Sbjct: 803 SAPKLSELSPERSFGSCKALQLWKEKTSLRGVSINK*ILINLFALLYNLFRILSWYAFSQ 624
Query: 402 CHKLIKNLRRAIRLMFQYISVNESKAIQTLS*S*LPHICQNPHSAFNFCHVDVFPEEIHK 581
+KL RA+RLMF+ I ++E + IQTLS*S I Q P S F F H ++ PEE+H
Sbjct: 623 SNKLFNYFGRAVRLMFKNIHIDEREGIQTLS*SKFFQITQYPDSTFYFRHANILPEEVHN 444
Query: 582 HLFI*PHPLYRFFFYVVFLRKEMVNIDHNCFLYASLH 692
+LFI*PHP YR F VVFL +++++++H+C L S +
Sbjct: 443 NLFI*PHPFYRLFLDVVFLSQKVIHVNHHCLLKTSFN 333
Score = 143 bits (306), Expect = 2e-033
Identities = 76/145 (52%), Positives = 78/145 (53%)
Frame = +1 / -2
Query: 259 PFFAVKHFNLPNTKPDF*GLPSTSEFSYISLHSCTTSLASFFGMPSRIATSL*KTSGGQS 438
P A KHFN KP F G PSTSEFS ISLHSCTTS ASF GMPSR TS TSGGQS
Sbjct: 766 PLEAAKHFNFGKRKPAFAGFPSTSEFS*ISLHSCTTSFASFRGMPSRSPTSFSTTSGGQS 587
Query: 439 G*CSSILV*MRVXXXXXXXXXXXXXXXXXXTLLSTFVTLMCXXXXXXXXXXXXXXXXXXX 618
G*CS I +*M V TLLST TL+
Sbjct: 586 G*CSRIFI*MSVKVSKLSPEASSFKSLSILTLLSTLDTLIYSLKKSIITSSSSLIRSIVS 407
Query: 619 XFM*FF*ERRWST*TTIVSSMQAST 693
M*FF* RR ST*TT VSS QAST
Sbjct: 406 SLM*FF*VRR*ST*TTTVSSRQAST 332
Score = 111 bits (237), Expect = 5e-024
Identities = 63/145 (43%), Positives = 82/145 (56%)
Frame = -2 / +2
Query: 693 CGGLHRGNNCGLC*PSPFSEKLHKXXXXXXXXXXXRGAYGFLQGTHQRDKS*KQSADSGR 514
C L G++ GL SEKLH+ RG YG LQG + R S K S D+
Sbjct: 332 C*SLS*GDSGGLRGSPSDSEKLHQGRDDRTDEAR*RGYYGLLQGVY*RV*SRK*SQDTE* 511
Query: 513 YEGASFS*EFG*LYSHLH*YTGTST*LPA*GFL*ACGNAGRHSKKGSQGGCTRMQRDIRE 334
+E F EFG L++HL+ Y+ TST*LPA AC A RH+ KG + GCTR+QRD+ E
Sbjct: 512 FERTCFRREFGYLHAHLYEYS*TST*LPARSS*KACWTARRHTTKGCERGCTRVQRDL*E 691
Query: 333 LACGWQPSEVRFCVWQIEVLDSKER 259
C W+P E F + ++EVL S +R
Sbjct: 692 FTC*WKPREGWFSLSKVEVLCSFQR 766
>gb|DT511702.1|DT511702 WS02417.B21_D03 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02417_D03 3', mRNA sequence
Length = 836
Score = 293 bits (634), Expect = 9e-079
Identities = 119/145 (82%), Positives = 135/145 (93%)
Frame = -3 / -1
Query: 692 VEACIEETIVVYVDHLLSQKNYIKEETIERMRLDEEVLMDFFREHINVTKVESRVRILAD 513
VEAC+EET+VVYVDHLL+QKNYIKEETIERMRLDEEV+MDFFRE+I+V+KVESRVRIL+D
Sbjct: 734 VEACLEETVVVYVDHLLTQKNYIKEETIERMRLDEEVIMDFFREYISVSKVESRVRILSD 555
Query: 512 MRELASAESLDSFTLIYTNILEHQPDCPPEVFYKLVAMREGIPKKEAKEVVQECKEIYEN 333
++ELAS ESLD+FTLIY NILEHQPDCPPEV KLV +REGIP+K+AKEVVQECKEIYEN
Sbjct: 554 LKELASGESLDTFTLIYMNILEHQPDCPPEVVEKLVGLREGIPRKDAKEVVQECKEIYEN 375
Query: 332 SLVDGNPQKSGFVFGKLKCLTAKKG 258
SLVDGNP K+GF+F KLKC A KG
Sbjct: 374 SLVDGNPAKAGFLFPKLKCFAASKG 300
Score = 166 bits (357), Expect = 1e-040
Identities = 74/157 (47%), Positives = 100/157 (63%)
Frame = +3 / +3
Query: 222 SSPHLLPKLPPYAFLCCQALQFAKHKTGLLRVAIHKRVLVYLFAFLYNLLGFLFWNAFPH 401
S+P L P +F C+ALQ K KT L V+I+K +L+ LFA LYNL L W AF
Sbjct: 264 SAPKLSELSPERSFGSCKALQLWKEKTSLRGVSINK*ILINLFALLYNLFRILSWYAFSQ 443
Query: 402 CHKLIKNLRRAIRLMFQYISVNESKAIQTLS*S*LPHICQNPHSAFNFCHVDVFPEEIHK 581
+KL RA+RLMF+ I ++E + IQTLS*S I Q P S F F H ++ PEE+H
Sbjct: 444 SNKLFNYFGRAVRLMFKNIHIDEREGIQTLS*SKFFQITQYPDSTFYFRHANILPEEVHN 623
Query: 582 HLFI*PHPLYRFFFYVVFLRKEMVNIDHNCFLYASLH 692
+LFI*PHP YR F VVFL +++++++H+C L S +
Sbjct: 624 NLFI*PHPFYRLFLDVVFLSQKVIHVNHHCLLKTSFN 734
Score = 143 bits (306), Expect = 2e-033
Identities = 76/145 (52%), Positives = 78/145 (53%)
Frame = +1 / +1
Query: 259 PFFAVKHFNLPNTKPDF*GLPSTSEFSYISLHSCTTSLASFFGMPSRIATSL*KTSGGQS 438
P A KHFN KP F G PSTSEFS ISLHSCTTS ASF GMPSR TS TSGGQS
Sbjct: 301 PLEAAKHFNFGKRKPAFAGFPSTSEFS*ISLHSCTTSFASFRGMPSRSPTSFSTTSGGQS 480
Query: 439 G*CSSILV*MRVXXXXXXXXXXXXXXXXXXTLLSTFVTLMCXXXXXXXXXXXXXXXXXXX 618
G*CS I +*M V TLLST TL+
Sbjct: 481 G*CSRIFI*MSVKVSKLSPEASSFKSLSILTLLSTLDTLIYSLKKSIITSSSSLIRSIVS 660
Query: 619 XFM*FF*ERRWST*TTIVSSMQAST 693
M*FF* RR ST*TT VSS QAST
Sbjct: 661 SLM*FF*VRR*ST*TTTVSSRQAST 735
Score = 111 bits (237), Expect = 5e-024
Identities = 63/145 (43%), Positives = 82/145 (56%)
Frame = -2 / -3
Query: 693 CGGLHRGNNCGLC*PSPFSEKLHKXXXXXXXXXXXRGAYGFLQGTHQRDKS*KQSADSGR 514
C L G++ GL SEKLH+ RG YG LQG + R S K S D+
Sbjct: 735 C*SLS*GDSGGLRGSPSDSEKLHQGRDDRTDEAR*RGYYGLLQGVY*RV*SRK*SQDTE* 556
Query: 513 YEGASFS*EFG*LYSHLH*YTGTST*LPA*GFL*ACGNAGRHSKKGSQGGCTRMQRDIRE 334
+E F EFG L++HL+ Y+ TST*LPA AC A RH+ KG + GCTR+QRD+ E
Sbjct: 555 FERTCFRREFGYLHAHLYEYS*TST*LPARSS*KACWTARRHTTKGCERGCTRVQRDL*E 376
Query: 333 LACGWQPSEVRFCVWQIEVLDSKER 259
C W+P E F + ++EVL S +R
Sbjct: 375 FTC*WKPREGWFSLSKVEVLCSFQR 301
>gb|DT519107.1|DT519107 WS02440.B21_E15 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02440_E15 3', mRNA sequence
Length = 743
Score = 293 bits (634), Expect = 9e-079
Identities = 119/145 (82%), Positives = 135/145 (93%)
Frame = -3 / -2
Query: 692 VEACIEETIVVYVDHLLSQKNYIKEETIERMRLDEEVLMDFFREHINVTKVESRVRILAD 513
VEAC+EET+VVYVDHLL+QKNYIKEETIERMRLDEEV+MDFFRE+I+V+KVESRVRIL+D
Sbjct: 724 VEACLEETVVVYVDHLLTQKNYIKEETIERMRLDEEVIMDFFREYISVSKVESRVRILSD 545
Query: 512 MRELASAESLDSFTLIYTNILEHQPDCPPEVFYKLVAMREGIPKKEAKEVVQECKEIYEN 333
++ELAS ESLD+FTLIY NILEHQPDCPPEV KLV +REGIP+K+AKEVVQECKEIYEN
Sbjct: 544 LKELASGESLDTFTLIYMNILEHQPDCPPEVVEKLVGLREGIPRKDAKEVVQECKEIYEN 365
Query: 332 SLVDGNPQKSGFVFGKLKCLTAKKG 258
SLVDGNP K+GF+F KLKC A KG
Sbjct: 364 SLVDGNPAKAGFLFPKLKCFAASKG 290
Score = 166 bits (357), Expect = 1e-040
Identities = 74/157 (47%), Positives = 100/157 (63%)
Frame = +3 / +2
Query: 222 SSPHLLPKLPPYAFLCCQALQFAKHKTGLLRVAIHKRVLVYLFAFLYNLLGFLFWNAFPH 401
S+P L P +F C+ALQ K KT L V+I+K +L+ LFA LYNL L W AF
Sbjct: 254 SAPKLSELSPERSFGSCKALQLWKEKTSLRGVSINK*ILINLFALLYNLFRILSWYAFSQ 433
Query: 402 CHKLIKNLRRAIRLMFQYISVNESKAIQTLS*S*LPHICQNPHSAFNFCHVDVFPEEIHK 581
+KL RA+RLMF+ I ++E + IQTLS*S I Q P S F F H ++ PEE+H
Sbjct: 434 SNKLFNYFGRAVRLMFKNIHIDEREGIQTLS*SKFFQITQYPDSTFYFRHANILPEEVHN 613
Query: 582 HLFI*PHPLYRFFFYVVFLRKEMVNIDHNCFLYASLH 692
+LFI*PHP YR F VVFL +++++++H+C L S +
Sbjct: 614 NLFI*PHPFYRLFLDVVFLSQKVIHVNHHCLLKTSFN 724
Score = 143 bits (306), Expect = 2e-033
Identities = 76/145 (52%), Positives = 78/145 (53%)
Frame = +1 / +3
Query: 259 PFFAVKHFNLPNTKPDF*GLPSTSEFSYISLHSCTTSLASFFGMPSRIATSL*KTSGGQS 438
P A KHFN KP F G PSTSEFS ISLHSCTTS ASF GMPSR TS TSGGQS
Sbjct: 291 PLEAAKHFNFGKRKPAFAGFPSTSEFS*ISLHSCTTSFASFRGMPSRSPTSFSTTSGGQS 470
Query: 439 G*CSSILV*MRVXXXXXXXXXXXXXXXXXXTLLSTFVTLMCXXXXXXXXXXXXXXXXXXX 618
G*CS I +*M V TLLST TL+
Sbjct: 471 G*CSRIFI*MSVKVSKLSPEASSFKSLSILTLLSTLDTLIYSLKKSIITSSSSLIRSIVS 650
Query: 619 XFM*FF*ERRWST*TTIVSSMQAST 693
M*FF* RR ST*TT VSS QAST
Sbjct: 651 SLM*FF*VRR*ST*TTTVSSRQAST 725
Score = 111 bits (237), Expect = 5e-024
Identities = 63/145 (43%), Positives = 82/145 (56%)
Frame = -2 / -1
Query: 693 CGGLHRGNNCGLC*PSPFSEKLHKXXXXXXXXXXXRGAYGFLQGTHQRDKS*KQSADSGR 514
C L G++ GL SEKLH+ RG YG LQG + R S K S D+
Sbjct: 725 C*SLS*GDSGGLRGSPSDSEKLHQGRDDRTDEAR*RGYYGLLQGVY*RV*SRK*SQDTE* 546
Query: 513 YEGASFS*EFG*LYSHLH*YTGTST*LPA*GFL*ACGNAGRHSKKGSQGGCTRMQRDIRE 334
+E F EFG L++HL+ Y+ TST*LPA AC A RH+ KG + GCTR+QRD+ E
Sbjct: 545 FERTCFRREFGYLHAHLYEYS*TST*LPARSS*KACWTARRHTTKGCERGCTRVQRDL*E 366
Query: 333 LACGWQPSEVRFCVWQIEVLDSKER 259
C W+P E F + ++EVL S +R
Sbjct: 365 FTC*WKPREGWFSLSKVEVLCSFQR 291
>gb|DT511227.1|DT511227 WS02429.BR_O08 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02429_O08 5', mRNA sequence
Length = 646
Score = 254 bits (550), Expect = 3e-067
Identities = 104/127 (81%), Positives = 117/127 (92%)
Frame = -3 / +2
Query: 638 QKNYIKEETIERMRLDEEVLMDFFREHINVTKVESRVRILADMRELASAESLDSFTLIYT 459
QKNYIKEETIERMRLDEEV+MDFFRE+I+V+KVESRVRIL+D++ELAS ESLD+FTLIY
Sbjct: 2 QKNYIKEETIERMRLDEEVIMDFFREYISVSKVESRVRILSDLKELASGESLDTFTLIYM 181
Query: 458 NILEHQPDCPPEVFYKLVAMREGIPKKEAKEVVQECKEIYENSLVDGNPQKSGFVFGKLK 279
NILEHQPDCPPEV KLV +REGIP+K+AKEVVQECKEIYENSLVDGNP K+GF+F KLK
Sbjct: 182 NILEHQPDCPPEVVEKLVGLREGIPRKDAKEVVQECKEIYENSLVDGNPAKAGFLFPKLK 361
Query: 278 CLTAKKG 258
C A KG
Sbjct: 362 CFAASKG 382
Score = 150 bits (322), Expect = 9e-036
Identities = 70/139 (50%), Positives = 87/139 (62%)
Frame = +3 / -1
Query: 222 SSPHLLPKLPPYAFLCCQALQFAKHKTGLLRVAIHKRVLVYLFAFLYNLLGFLFWNAFPH 401
S+P L P +F C+ALQ K KT L V+I+K +L+ LFA LYNL L W AF
Sbjct: 418 SAPKLSELSPERSFGSCKALQLWKEKTSLRGVSINK*ILINLFALLYNLFRILSWYAFSQ 239
Query: 402 CHKLIKNLRRAIRLMFQYISVNESKAIQTLS*S*LPHICQNPHSAFNFCHVDVFPEEIHK 581
+KL RA+RLMF+ I ++E + IQTLS*S I Q P S F F H ++ PEE+H
Sbjct: 238 SNKLFNYFGRAVRLMFKNIHIDEREGIQTLS*SKFFQITQYPDSTFYFRHANILPEEVHN 59
Query: 582 HLFI*PHPLYRFFFYVVFL 638
+LFI*PHP YR F VVFL
Sbjct: 58 NLFI*PHPFYRLFLDVVFL 2
Score = 118 bits (253), Expect = 3e-026
Identities = 61/126 (48%), Positives = 63/126 (50%)
Frame = +1 / -2
Query: 259 PFFAVKHFNLPNTKPDF*GLPSTSEFSYISLHSCTTSLASFFGMPSRIATSL*KTSGGQS 438
P A KHFN KP F G PSTSEFS ISLHSCTTS ASF GMPSR TS TSGGQS
Sbjct: 381 PLEAAKHFNFGKRKPAFAGFPSTSEFS*ISLHSCTTSFASFRGMPSRSPTSFSTTSGGQS 202
Query: 439 G*CSSILV*MRVXXXXXXXXXXXXXXXXXXTLLSTFVTLMCXXXXXXXXXXXXXXXXXXX 618
G*CS I +*M V TLLST TL+
Sbjct: 201 G*CSRIFI*MSVKVSKLSPEASSFKSLSILTLLSTLDTLIYSLKKSIITSSSSLIRSIVS 22
Query: 619 XFM*FF 636
M*FF
Sbjct: 21 SLM*FF 4
Score = 107 bits (228), Expect = 9e-023
Identities = 57/127 (44%), Positives = 75/127 (59%)
Frame = -2 / +1
Query: 639 SEKLHKXXXXXXXXXXXRGAYGFLQGTHQRDKS*KQSADSGRYEGASFS*EFG*LYSHLH 460
+EKLH+ RG YG LQG + R S K S D+ +E F EFG L++HL+
Sbjct: 1 AEKLHQGRDDRTDEAR*RGYYGLLQGVY*RV*SRK*SQDTE*FERTCFRREFGYLHAHLY 180
Query: 459 *YTGTST*LPA*GFL*ACGNAGRHSKKGSQGGCTRMQRDIRELACGWQPSEVRFCVWQIE 280
Y+ TST*LPA AC A RH+ KG + GCTR+QRD+ E C W+P E F + ++E
Sbjct: 181 EYS*TST*LPARSS*KACWTARRHTTKGCERGCTRVQRDL*EFTC*WKPREGWFSLSKVE 360
Query: 279 VLDSKER 259
VL S +R
Sbjct: 361 VLCSFQR 381
>gb|DT515921.1|DT515921 WS02429.B21.1_O08 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02429_O08 3', mRNA sequence
Length = 645
Score = 254 bits (550), Expect = 3e-067
Identities = 104/127 (81%), Positives = 117/127 (92%)
Frame = -3 / -2
Query: 638 QKNYIKEETIERMRLDEEVLMDFFREHINVTKVESRVRILADMRELASAESLDSFTLIYT 459
QKNYIKEETIERMRLDEEV+MDFFRE+I+V+KVESRVRIL+D++ELAS ESLD+FTLIY
Sbjct: 644 QKNYIKEETIERMRLDEEVIMDFFREYISVSKVESRVRILSDLKELASGESLDTFTLIYM 465
Query: 458 NILEHQPDCPPEVFYKLVAMREGIPKKEAKEVVQECKEIYENSLVDGNPQKSGFVFGKLK 279
NILEHQPDCPPEV KLV +REGIP+K+AKEVVQECKEIYENSLVDGNP K+GF+F KLK
Sbjct: 464 NILEHQPDCPPEVVEKLVGLREGIPRKDAKEVVQECKEIYENSLVDGNPAKAGFLFPKLK 285
Query: 278 CLTAKKG 258
C A KG
Sbjct: 284 CFAASKG 264
Score = 150 bits (322), Expect = 9e-036
Identities = 70/139 (50%), Positives = 87/139 (62%)
Frame = +3 / +3
Query: 222 SSPHLLPKLPPYAFLCCQALQFAKHKTGLLRVAIHKRVLVYLFAFLYNLLGFLFWNAFPH 401
S+P L P +F C+ALQ K KT L V+I+K +L+ LFA LYNL L W AF
Sbjct: 228 SAPKLSELSPERSFGSCKALQLWKEKTSLRGVSINK*ILINLFALLYNLFRILSWYAFSQ 407
Query: 402 CHKLIKNLRRAIRLMFQYISVNESKAIQTLS*S*LPHICQNPHSAFNFCHVDVFPEEIHK 581
+KL RA+RLMF+ I ++E + IQTLS*S I Q P S F F H ++ PEE+H
Sbjct: 408 SNKLFNYFGRAVRLMFKNIHIDEREGIQTLS*SKFFQITQYPDSTFYFRHANILPEEVHN 587
Query: 582 HLFI*PHPLYRFFFYVVFL 638
+LFI*PHP YR F VVFL
Sbjct: 588 NLFI*PHPFYRLFLDVVFL 644
Score = 118 bits (253), Expect = 3e-026
Identities = 61/126 (48%), Positives = 63/126 (50%)
Frame = +1 / +1
Query: 259 PFFAVKHFNLPNTKPDF*GLPSTSEFSYISLHSCTTSLASFFGMPSRIATSL*KTSGGQS 438
P A KHFN KP F G PSTSEFS ISLHSCTTS ASF GMPSR TS TSGGQS
Sbjct: 265 PLEAAKHFNFGKRKPAFAGFPSTSEFS*ISLHSCTTSFASFRGMPSRSPTSFSTTSGGQS 444
Query: 439 G*CSSILV*MRVXXXXXXXXXXXXXXXXXXTLLSTFVTLMCXXXXXXXXXXXXXXXXXXX 618
G*CS I +*M V TLLST TL+
Sbjct: 445 G*CSRIFI*MSVKVSKLSPEASSFKSLSILTLLSTLDTLIYSLKKSIITSSSSLIRSIVS 624
Query: 619 XFM*FF 636
M*FF
Sbjct: 625 SLM*FF 642
Score = 107 bits (228), Expect = 9e-023
Identities = 57/127 (44%), Positives = 75/127 (59%)
Frame = -2 / -1
Query: 639 SEKLHKXXXXXXXXXXXRGAYGFLQGTHQRDKS*KQSADSGRYEGASFS*EFG*LYSHLH 460
+EKLH+ RG YG LQG + R S K S D+ +E F EFG L++HL+
Sbjct: 645 AEKLHQGRDDRTDEAR*RGYYGLLQGVY*RV*SRK*SQDTE*FERTCFRREFGYLHAHLY 466
Query: 459 *YTGTST*LPA*GFL*ACGNAGRHSKKGSQGGCTRMQRDIRELACGWQPSEVRFCVWQIE 280
Y+ TST*LPA AC A RH+ KG + GCTR+QRD+ E C W+P E F + ++E
Sbjct: 465 EYS*TST*LPARSS*KACWTARRHTTKGCERGCTRVQRDL*EFTC*WKPREGWFSLSKVE 286
Query: 279 VLDSKER 259
VL S +R
Sbjct: 285 VLCSFQR 265
>gb|BI129397.1|BI129397 G090P20Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 474
Score = 243 bits (526), Expect = 7e-064
Identities = 100/117 (85%), Positives = 113/117 (96%)
Frame = -3 / +3
Query: 692 VEACIEETIVVYVDHLLSQKNYIKEETIERMRLDEEVLMDFFREHINVTKVESRVRILAD 513
VEAC+EET+VVYVDHLL+Q+NYIKEETIERMRLDEEV+MDFFRE+I V+KVESRVRIL+D
Sbjct: 123 VEACLEETMVVYVDHLLTQRNYIKEETIERMRLDEEVIMDFFREYITVSKVESRVRILSD 302
Query: 512 MRELASAESLDSFTLIYTNILEHQPDCPPEVFYKLVAMREGIPKKEAKEVVQECKEI 342
+RELASAESLDSFTLIYTNILEHQPDCPPEV KLV +REGIP+K+AKEV+QECKEI
Sbjct: 303 LRELASAESLDSFTLIYTNILEHQPDCPPEVVEKLVGLREGIPRKDAKEVMQECKEI 473
Score = 144 bits (309), Expect = 6e-034
Identities = 60/117 (51%), Positives = 78/117 (66%)
Frame = +3 / -2
Query: 342 YLFAFLYNLLGFLFWNAFPHCHKLIKNLRRAIRLMFQYISVNESKAIQTLS*S*LPHICQ 521
YLFA L+NL L W AF +KL N RRA+ LMF+ I ++ES+ IQTL *S I Q
Sbjct: 473 YLFALLHNLFRILPWYAFSQSNKLFNNFRRAVGLMFKNICIDESEGIQTLC*SKFSQITQ 294
Query: 522 NPHSAFNFCHVDVFPEEIHKHLFI*PHPLYRFFFYVVFLRKEMVNIDHNCFLYASLH 692
P S F F H D+ PEE+H +LFI*PHP Y F YVV L ++++N++H+CFL S +
Sbjct: 293 YPDSTFYFRHCDILPEEVHNNLFI*PHPFYCLFLYVVSLSQKVINVNHHCFLKTSFN 123
Score = 109 bits (232), Expect = 2e-023
Identities = 60/117 (51%), Positives = 62/117 (52%)
Frame = +1 / -3
Query: 343 ISLHSCTTSLASFFGMPSRIATSL*KTSGGQSG*CSSILV*MRVXXXXXXXXXXXXXXXX 522
ISLHSC TS ASF GMPSR TS TSGGQSG*CS I V*MRV
Sbjct: 472 ISLHSCITSFASFRGMPSRSPTSFSTTSGGQSG*CSRIFV*MRVKESRLSAEASSLKSLS 293
Query: 523 XXTLLSTFVTLMCXXXXXXXXXXXXXXXXXXXXFM*FF*ERRWST*TTIVSSMQAST 693
TLLST T++ FM*F * RR ST*TTIVSS QAST
Sbjct: 292 IRTLLSTLDTVIYSLKKSIITSSSSLIRSIVSSFM*FL*VRR*ST*TTIVSSRQAST 122
>gb|CK102756.1|CK102756 G090P20.5pR Populus tension wood cDNA library Populus tremula x
Populus tremuloides cDNA clone G090P20 5', mRNA sequence
Length = 372
Score = 96.4 bits (204), Expect(2) = 5e-038
Identities = 38/43 (88%), Positives = 43/43 (100%)
Frame = -3 / +2
Query: 692 VEACIEETIVVYVDHLLSQKNYIKEETIERMRLDEEVLMDFFR 564
VEAC+EET+VVYVDHLL+Q+NYIKEETIERMRLDEEV+MDFFR
Sbjct: 122 VEACLEETMVVYVDHLLTQRNYIKEETIERMRLDEEVIMDFFR 250
Score = 81.7 bits (172), Expect(2) = 5e-038
Identities = 35/40 (87%), Positives = 39/40 (97%)
Frame = -3 / +3
Query: 563 EHINVTKVESRVRILADMRELASAESLDSFTLIYTNILEH 444
E+I V+KVESRVRIL+D+RELASAESLDSFTLIYTNILEH
Sbjct: 252 EYITVSKVESRVRILSDLRELASAESLDSFTLIYTNILEH 371
>gb|CX656397.1|CX656397 PO01001C04 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO01001C04 5', mRNA sequence
Length = 497
Score = 133 bits (286), Expect = 9e-031
Identities = 54/63 (85%), Positives = 63/63 (100%)
Frame = -3 / +2
Query: 692 VEACIEETIVVYVDHLLSQKNYIKEETIERMRLDEEVLMDFFREHINVTKVESRVRILAD 513
VEAC+EET+VVYVDHLL+QKNYIKEETIERMRLDEEV+MDFFRE+I+VTKVESRVRIL+D
Sbjct: 308 VEACLEETVVVYVDHLLTQKNYIKEETIERMRLDEEVIMDFFREYISVTKVESRVRILSD 487
Query: 512 MRE 504
++E
Sbjct: 488 LKE 496
>gb|CV228477.1|CV228477 WS01910.B21_E04 PT-DX-N-A-10 Populus trichocarpa cDNA clone
WS01910_E04 3', mRNA sequence
Length = 485
Score = 130 bits (278), Expect = 1e-029
Identities = 51/65 (78%), Positives = 58/65 (89%)
Frame = -3 / -1
Query: 452 LEHQPDCPPEVFYKLVAMREGIPKKEAKEVVQECKEIYENSLVDGNPQKSGFVFGKLKCL 273
LEHQ DCPPEV KLV +REGIP+K+AKEV+QECKEIYENSLVDGNP K+GF+F K+KCL
Sbjct: 485 LEHQLDCPPEVVEKLVGLREGIPRKDAKEVMQECKEIYENSLVDGNPAKAGFLFPKVKCL 306
Query: 272 TAKKG 258
TA KG
Sbjct: 305 TASKG 291
Database: Populus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:49 PM
Number of letters in database: 203,408,664
Number of sequences in database: 369,679
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 362,284,983
Number of Sequences: 369679
Number of extensions: 5162198
Number of successful extensions: 56420
Number of sequences better than 1.0e-020: 11
length of database: 67,802,888
effective HSP length: 52
effective length of database: 48,579,580
effective search space used: 9084381460
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)