TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 4534747.2.1
(628 letters)
Database: Populus_nucl_with_EST.fasta
369,679 sequences; 203,408,664 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|DT523539.1|DT523539 WS02039.B21_P11 PTxN-IB-N-A-11 Popul... 159 8e-065
gb|DT485334.1|DT485334 WS02527.B21_O22 PT-MB-N-A-15 Populus... 159 8e-065
gb|DT515685.1|DT515685 WS02429.B21.1_D22 PTxD-ICC-N-A-14 Po... 159 8e-065
gb|CV232433.1|CV232433 WS0197.B21_J03 PT-DX-N-A-10 Populus ... 159 8e-065
gb|DT482867.1|DT482867 WS02521.B21_A02 PT-MB-N-A-15 Populus... 161 2e-064
gb|CV261322.1|CV261322 WS02016.B21_H12 PTxN-IB-N-A-11 Popul... 146 5e-061
gb|DN494990.1|DN494990 N009H07.5pR Populus bark cDNA librar... 153 3e-058
gb|DT476893.1|DT476893 WS01231.B21_D17 PT-GT-FL-A-3 Populus... 142 1e-056
gb|BU836496.1|BU836496 T087C12 Populus apical shoot cDNA li... 148 1e-053
gb|CK098382.1|CK098382 A012P77.5pR Hybrid aspen plasmid lib... 133 4e-053
gb|DT507221.1|DT507221 WS02417.BR_K22 PTxD-ICC-N-A-14 Popul... 113 5e-051
gb|DT511863.1|DT511863 WS02417.B21_K22 PTxD-ICC-N-A-14 Popu... 113 5e-051
gb|CA931263.1|CA931263 MTU2TA.P4.H08 Aspen apex cDNA Librar... 126 8e-051
gb|CN523462.1|CN523462 GQ015M10.T3_B08 GQ015 Populus tricho... 119 9e-050
gb|BI137613.1|BI137613 F089P39Y Populus flower cDNA library... 142 2e-048
gb|DN489293.1|DN489293 T021A10.3pR Populus shoot meristem c... 139 1e-047
gb|CV261185.1|CV261185 WS02016.B21_B13 PTxN-IB-N-A-11 Popul... 130 1e-047
gb|CV241963.1|CV241963 WS02513.B21_M01 PT-MB-N-A-15 Populus... 130 2e-047
gb|DN499789.1|DN499789 T087C12.5pR Populus shoot meristem c... 148 2e-046
gb|CF228348.1|CF228348 PtaXM0011H7H0715 Poplar cDNA library... 128 5e-046
gb|BI135709.1|BI135709 F057P33Y Populus flower cDNA library... 142 2e-045
gb|BI137634.1|BI137634 F089P73Y Populus flower cDNA library... 143 2e-042
gb|AI162152.1|AI162152 A012P77U Hybrid aspen plasmid librar... 156 8e-042
gb|CV259744.1|CV259744 WS02012.B21_C15 PTxN-IB-N-A-11 Popul... 105 2e-039
gb|DN486644.1|DN486644 P047G09.3pR Populus petioles cDNA li... 105 2e-038
gb|CX168744.1|CX168744 E01_69-81_09.ab1 leaf inoculated wit... 105 1e-037
gb|DV463015.1|DV463015 MTUNUL1.P10.F03 NUL Populus fremonti... 83 1e-031
gb|CV254493.1|CV254493 WS0241.B21_G02 PTxD-ICC-N-A-14 Popul... 98 4e-031
gb|DT518009.1|DT518009 WS02435.B21_P01 PTxD-ICC-N-A-14 Popu... 98 4e-031
gb|CF232477.1|CF232477 PtaJXO0011A11A1101 Poplar cDNA libra... 93 2e-030
gb|DT517326.1|DT517326 WS02433.B21_P21 PTxD-ICC-N-A-14 Popu... 94 3e-030
gb|DT481483.1|DT481483 WS02532.BR_A02 PT-MB-N-A-15 Populus ... 81 2e-029
gb|DT486813.1|DT486813 WS02532.B21_A02 PT-MB-N-A-15 Populus... 81 2e-029
gb|BI129456.1|BI129456 G090P88Y Populus cambium cDNA librar... 127 6e-029
gb|CV264069.1|CV264069 WS02023.B21_I14 PTxN-IB-N-A-11 Popul... 79 2e-028
gb|DT520021.1|DT520021 WS02446.B21.1_F15 PTxD-ICC-N-A-14 Po... 97 9e-028
gb|BU813391.1|BU813391 N009H07 Populus bark cDNA library Po... 105 3e-022
gb|BP933399.1|BP933399 BP933399 full-length enriched poplar... 94 2e-021
>gb|DT523539.1|DT523539 WS02039.B21_P11 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02039_P11 3', mRNA sequence
Length = 925
Score = 159 bits (342), Expect(2) = 8e-065
Identities = 63/76 (82%), Positives = 67/76 (88%)
Frame = +2 / -1
Query: 41 EFNAEPTDARSTSFVGTHEYLAPEIVRGEGHGSAVDWWTFGIFLYELLHGTTPFKGDSNR 220
E AEPTDARS SFVGTHEYLAPEI++GEGHGSAVDWWTFGIFLYELL G TPFKG NR
Sbjct: 706 ELIAEPTDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNR 527
Query: 221 ATLCNVVDQPLRFPDA 268
ATL NVV QPLRFP++
Sbjct: 526 ATLFNVVGQPLRFPES 479
Score = 128 bits (274), Expect(2) = 4e-040
Identities = 54/75 (72%), Positives = 62/75 (82%)
Frame = -2 / +3
Query: 264 SGNRSGWSTTLHSVARLLSPLNGVVPWRSSYRKMPKVHQSTALPWPSPLTISGARYSCVP 85
SGNR GW TTL++VAR PL GV P +SSYRK+PKVHQSTALP PSPL ISGA+YS VP
Sbjct: 483 SGNRRGWPTTLNNVARFPDPLKGVFPNKSSYRKIPKVHQSTALP*PSPLMISGAKYSWVP 662
Query: 84 TNDVDRASVGSALNS 40
T D+D ASVGSA++S
Sbjct: 663 TKDIDLASVGSAMSS 707
Score = 107 bits (229), Expect(2) = 8e-065
Identities = 41/61 (67%), Positives = 51/61 (83%)
Frame = +2 / -1
Query: 284 VSTVARDLIRGLLVKDPQKRIATRRGAAEIKQHPFFDGVNWALVRDAHPPSVPDPADLGR 463
VS ARDLIRGLLVK+PQ R+A++RGA EIKQHPFF+GVNWAL+R A PP +P P ++ R
Sbjct: 472 VSFAARDLIRGLLVKEPQHRLASKRGATEIKQHPFFEGVNWALIRCATPPEIPKPVEIER 293
Query: 464 V 466
+
Sbjct: 292 I 290
Score = 56.5 bits (117), Expect(2) = 4e-040
Identities = 26/41 (63%), Positives = 26/41 (63%)
Frame = -2 / +3
Query: 405 QLTPSKNGCCLISAAPLLVAILFWGSFTRSPRMRSRATVLT 283
Q TPSK GCC IS AP L A L GSFT P MRS A LT
Sbjct: 351 QFTPSKKGCCFISVAPRLDANLCCGSFTSKPLMRSLAAKLT 473
>gb|DT485334.1|DT485334 WS02527.B21_O22 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02527_O22 3', mRNA sequence
Length = 904
Score = 159 bits (342), Expect(2) = 8e-065
Identities = 63/76 (82%), Positives = 67/76 (88%)
Frame = +2 / -1
Query: 41 EFNAEPTDARSTSFVGTHEYLAPEIVRGEGHGSAVDWWTFGIFLYELLHGTTPFKGDSNR 220
E AEPTDARS SFVGTHEYLAPEI++GEGHGSAVDWWTFGIFLYELL G TPFKG NR
Sbjct: 634 ELIAEPTDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNR 455
Query: 221 ATLCNVVDQPLRFPDA 268
ATL NVV QPLRFP++
Sbjct: 454 ATLFNVVGQPLRFPES 407
Score = 128 bits (274), Expect(2) = 4e-040
Identities = 54/75 (72%), Positives = 62/75 (82%)
Frame = -2 / +3
Query: 264 SGNRSGWSTTLHSVARLLSPLNGVVPWRSSYRKMPKVHQSTALPWPSPLTISGARYSCVP 85
SGNR GW TTL++VAR PL GV P +SSYRK+PKVHQSTALP PSPL ISGA+YS VP
Sbjct: 411 SGNRRGWPTTLNNVARFPDPLKGVFPNKSSYRKIPKVHQSTALP*PSPLMISGAKYSWVP 590
Query: 84 TNDVDRASVGSALNS 40
T D+D ASVGSA++S
Sbjct: 591 TKDIDLASVGSAMSS 635
Score = 107 bits (229), Expect(2) = 8e-065
Identities = 41/61 (67%), Positives = 51/61 (83%)
Frame = +2 / -1
Query: 284 VSTVARDLIRGLLVKDPQKRIATRRGAAEIKQHPFFDGVNWALVRDAHPPSVPDPADLGR 463
VS ARDLIRGLLVK+PQ R+A++RGA EIKQHPFF+GVNWAL+R A PP +P P ++ R
Sbjct: 400 VSFAARDLIRGLLVKEPQHRLASKRGATEIKQHPFFEGVNWALIRCATPPEIPKPVEIER 221
Query: 464 V 466
+
Sbjct: 220 I 218
Score = 56.5 bits (117), Expect(2) = 4e-040
Identities = 26/41 (63%), Positives = 26/41 (63%)
Frame = -2 / +3
Query: 405 QLTPSKNGCCLISAAPLLVAILFWGSFTRSPRMRSRATVLT 283
Q TPSK GCC IS AP L A L GSFT P MRS A LT
Sbjct: 279 QFTPSKKGCCFISVAPRLDANLCCGSFTSKPLMRSLAAKLT 401
>gb|DT515685.1|DT515685 WS02429.B21.1_D22 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02429_D22 3', mRNA sequence
Length = 894
Score = 159 bits (342), Expect(2) = 8e-065
Identities = 63/76 (82%), Positives = 67/76 (88%)
Frame = +2 / -3
Query: 41 EFNAEPTDARSTSFVGTHEYLAPEIVRGEGHGSAVDWWTFGIFLYELLHGTTPFKGDSNR 220
E AEPTDARS SFVGTHEYLAPEI++GEGHGSAVDWWTFGIFLYELL G TPFKG NR
Sbjct: 628 ELIAEPTDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNR 449
Query: 221 ATLCNVVDQPLRFPDA 268
ATL NVV QPLRFP++
Sbjct: 448 ATLFNVVGQPLRFPES 401
Score = 128 bits (274), Expect(2) = 4e-040
Identities = 54/75 (72%), Positives = 62/75 (82%)
Frame = -2 / +3
Query: 264 SGNRSGWSTTLHSVARLLSPLNGVVPWRSSYRKMPKVHQSTALPWPSPLTISGARYSCVP 85
SGNR GW TTL++VAR PL GV P +SSYRK+PKVHQSTALP PSPL ISGA+YS VP
Sbjct: 405 SGNRRGWPTTLNNVARFPDPLKGVFPNKSSYRKIPKVHQSTALP*PSPLMISGAKYSWVP 584
Query: 84 TNDVDRASVGSALNS 40
T D+D ASVGSA++S
Sbjct: 585 TKDIDLASVGSAMSS 629
Score = 107 bits (229), Expect(2) = 8e-065
Identities = 41/61 (67%), Positives = 51/61 (83%)
Frame = +2 / -3
Query: 284 VSTVARDLIRGLLVKDPQKRIATRRGAAEIKQHPFFDGVNWALVRDAHPPSVPDPADLGR 463
VS ARDLIRGLLVK+PQ R+A++RGA EIKQHPFF+GVNWAL+R A PP +P P ++ R
Sbjct: 394 VSFAARDLIRGLLVKEPQHRLASKRGATEIKQHPFFEGVNWALIRCATPPEIPKPVEIER 215
Query: 464 V 466
+
Sbjct: 214 I 212
Score = 56.5 bits (117), Expect(2) = 4e-040
Identities = 26/41 (63%), Positives = 26/41 (63%)
Frame = -2 / +3
Query: 405 QLTPSKNGCCLISAAPLLVAILFWGSFTRSPRMRSRATVLT 283
Q TPSK GCC IS AP L A L GSFT P MRS A LT
Sbjct: 273 QFTPSKKGCCFISVAPRLDANLCCGSFTSKPLMRSLAAKLT 395
>gb|CV232433.1|CV232433 WS0197.B21_J03 PT-DX-N-A-10 Populus trichocarpa cDNA clone
WS0197_J03 3', mRNA sequence
Length = 745
Score = 159 bits (342), Expect(2) = 8e-065
Identities = 63/76 (82%), Positives = 67/76 (88%)
Frame = +2 / -1
Query: 41 EFNAEPTDARSTSFVGTHEYLAPEIVRGEGHGSAVDWWTFGIFLYELLHGTTPFKGDSNR 220
E AEPTDARS SFVGTHEYLAPEI++GEGHGSAVDWWTFGIFLYELL G TPFKG NR
Sbjct: 682 ELIAEPTDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNR 503
Query: 221 ATLCNVVDQPLRFPDA 268
ATL NVV QPLRFP++
Sbjct: 502 ATLFNVVGQPLRFPES 455
Score = 128 bits (274), Expect(2) = 4e-040
Identities = 54/75 (72%), Positives = 62/75 (82%)
Frame = -2 / +3
Query: 264 SGNRSGWSTTLHSVARLLSPLNGVVPWRSSYRKMPKVHQSTALPWPSPLTISGARYSCVP 85
SGNR GW TTL++VAR PL GV P +SSYRK+PKVHQSTALP PSPL ISGA+YS VP
Sbjct: 459 SGNRRGWPTTLNNVARFPDPLKGVFPNKSSYRKIPKVHQSTALP*PSPLMISGAKYSWVP 638
Query: 84 TNDVDRASVGSALNS 40
T D+D ASVGSA++S
Sbjct: 639 TKDIDLASVGSAMSS 683
Score = 107 bits (229), Expect(2) = 8e-065
Identities = 41/61 (67%), Positives = 51/61 (83%)
Frame = +2 / -1
Query: 284 VSTVARDLIRGLLVKDPQKRIATRRGAAEIKQHPFFDGVNWALVRDAHPPSVPDPADLGR 463
VS ARDLIRGLLVK+PQ R+A++RGA EIKQHPFF+GVNWAL+R A PP +P P ++ R
Sbjct: 448 VSFAARDLIRGLLVKEPQHRLASKRGATEIKQHPFFEGVNWALIRCATPPEIPKPVEIER 269
Query: 464 V 466
+
Sbjct: 268 I 266
Score = 56.5 bits (117), Expect(2) = 4e-040
Identities = 26/41 (63%), Positives = 26/41 (63%)
Frame = -2 / +3
Query: 405 QLTPSKNGCCLISAAPLLVAILFWGSFTRSPRMRSRATVLT 283
Q TPSK GCC IS AP L A L GSFT P MRS A LT
Sbjct: 327 QFTPSKKGCCFISVAPRLDANLCCGSFTSKPLMRSLAAKLT 449
>gb|DT482867.1|DT482867 WS02521.B21_A02 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02521_A02 3', mRNA sequence
Length = 749
Score = 161 bits (347), Expect(2) = 2e-064
Identities = 64/77 (83%), Positives = 68/77 (88%)
Frame = +2 / -1
Query: 38 LEFNAEPTDARSTSFVGTHEYLAPEIVRGEGHGSAVDWWTFGIFLYELLHGTTPFKGDSN 217
LE AEPTDARS SFVGTHEYLAPEI++GEGHGSAVDWWTFGIFLYELL G TPFKG N
Sbjct: 668 LELMAEPTDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGN 489
Query: 218 RATLCNVVDQPLRFPDA 268
RATL NVV QPLRFP++
Sbjct: 488 RATLFNVVGQPLRFPES 438
Score = 135 bits (289), Expect(2) = 6e-042
Identities = 57/76 (75%), Positives = 65/76 (85%)
Frame = -2 / +1
Query: 264 SGNRSGWSTTLHSVARLLSPLNGVVPWRSSYRKMPKVHQSTALPWPSPLTISGARYSCVP 85
SGNR GW TTL++VAR PL GV+P +SSYRK+PKVHQSTALP PSPL ISGARYS VP
Sbjct: 442 SGNRRGWPTTLNNVARFPEPLKGVLPNKSSYRKIPKVHQSTALP*PSPLMISGARYSWVP 621
Query: 84 TNDVDRASVGSALNSS 37
TND+D ASVGSA++SS
Sbjct: 622 TNDIDLASVGSAMSSS 669
Score = 104 bits (221), Expect(2) = 2e-064
Identities = 40/61 (65%), Positives = 49/61 (80%)
Frame = +2 / -1
Query: 284 VSTVARDLIRGLLVKDPQKRIATRRGAAEIKQHPFFDGVNWALVRDAHPPSVPDPADLGR 463
VS RDLIRGLLVK+PQ R+A +RGA EIKQHPFF+GVNWAL+R A PP +P P ++ R
Sbjct: 431 VSFAPRDLIRGLLVKEPQHRLAYKRGATEIKQHPFFEGVNWALIRCATPPEIPKPVEIER 252
Query: 464 V 466
+
Sbjct: 251 I 249
Score = 55.6 bits (115), Expect(2) = 6e-042
Identities = 25/41 (60%), Positives = 26/41 (63%)
Frame = -2 / +1
Query: 405 QLTPSKNGCCLISAAPLLVAILFWGSFTRSPRMRSRATVLT 283
Q TPSK GCCLIS AP L A L GSFT P +RS LT
Sbjct: 310 QFTPSKKGCCLISVAPRLYANLCCGSFTSKPLIRSLGAKLT 432
>gb|CV261322.1|CV261322 WS02016.B21_H12 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02016_H12 3', mRNA sequence
Length = 844
Score = 146 bits (314), Expect(2) = 5e-061
Identities = 57/70 (81%), Positives = 61/70 (87%)
Frame = +2 / -3
Query: 59 TDARSTSFVGTHEYLAPEIVRGEGHGSAVDWWTFGIFLYELLHGTTPFKGDSNRATLCNV 238
TDARS SFVGTHEYLAPEI++GEGHGSAVDWWTFGIFLYELL G TPFKG NRA L NV
Sbjct: 695 TDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRAPLFNV 516
Query: 239 VDQPLRFPDA 268
V QP RFP++
Sbjct: 515 VGQPFRFPES 486
Score = 116 bits (247), Expect(2) = 2e-036
Identities = 49/69 (71%), Positives = 55/69 (79%)
Frame = -2 / +1
Query: 264 SGNRSGWSTTLHSVARLLSPLNGVVPWRSSYRKMPKVHQSTALPWPSPLTISGARYSCVP 85
SGNR GW TTL++ AR PL GV P +SSYRK+PKVHQSTALP PSPL ISGA+YS VP
Sbjct: 490 SGNRKGWPTTLNNGARFPDPLKGVFPNKSSYRKIPKVHQSTALP*PSPLMISGAKYSWVP 669
Query: 84 TNDVDRASV 58
T D+D ASV
Sbjct: 670 TKDIDLASV 696
Score = 107 bits (229), Expect(2) = 5e-061
Identities = 41/61 (67%), Positives = 51/61 (83%)
Frame = +2 / -3
Query: 284 VSTVARDLIRGLLVKDPQKRIATRRGAAEIKQHPFFDGVNWALVRDAHPPSVPDPADLGR 463
VS ARDLIRGLLVK+PQ R+A++RGA EIKQHPFF+GVNWAL+R A PP +P P ++ R
Sbjct: 479 VSFAARDLIRGLLVKEPQHRLASKRGATEIKQHPFFEGVNWALIRCATPPEIPKPVEIER 300
Query: 464 V 466
+
Sbjct: 299 I 297
Score = 56.5 bits (117), Expect(2) = 2e-036
Identities = 26/41 (63%), Positives = 26/41 (63%)
Frame = -2 / +1
Query: 405 QLTPSKNGCCLISAAPLLVAILFWGSFTRSPRMRSRATVLT 283
Q TPSK GCC IS AP L A L GSFT P MRS A LT
Sbjct: 358 QFTPSKKGCCFISVAPRLDANLCCGSFTSKPLMRSLAAKLT 480
>gb|DN494990.1|DN494990 N009H07.5pR Populus bark cDNA library Populus tremula x Populus
tremuloides cDNA clone N009H07 5', mRNA sequence
Length = 760
Score = 153 bits (328), Expect(2) = 3e-058
Identities = 61/76 (80%), Positives = 66/76 (86%)
Frame = +2 / +1
Query: 41 EFNAEPTDARSTSFVGTHEYLAPEIVRGEGHGSAVDWWTFGIFLYELLHGTTPFKGDSNR 220
E AEPT ARS SFVGTHEYLAPEI++GEGHGSAVDWWTFGIFL+ELL+G TPFKG NR
Sbjct: 247 ELVAEPTAARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNR 426
Query: 221 ATLCNVVDQPLRFPDA 268
ATL NVV Q LRFPD+
Sbjct: 427 ATLFNVVGQQLRFPDS 474
Score = 123 bits (263), Expect(2) = 1e-035
Identities = 52/75 (69%), Positives = 60/75 (80%)
Frame = -2 / -3
Query: 264 SGNRSGWSTTLHSVARLLSPLNGVVPWRSSYRKMPKVHQSTALPWPSPLTISGARYSCVP 85
SGN S TTL+ VAR PLNGV+P+ SS +K+P VHQSTALPWPSPL ISGARYS VP
Sbjct: 470 SGNLSCCPTTLNKVARFPEPLNGVLPYNSSCKKIPNVHQSTALPWPSPLIISGARYSWVP 291
Query: 84 TNDVDRASVGSALNS 40
T D+DRA+VGSA +S
Sbjct: 290 TKDIDRAAVGSATSS 246
Score = 92.3 bits (195), Expect(2) = 3e-058
Identities = 34/53 (64%), Positives = 43/53 (81%)
Frame = +2 / +1
Query: 296 ARDLIRGLLVKDPQKRIATRRGAAEIKQHPFFDGVNWALVRDAHPPSVPDPAD 454
++DLIRGLLVK+PQ R+ +RGA EIKQHPFF+ VNWAL+R + PP VP P +
Sbjct: 493 SQDLIRGLLVKEPQHRLGVKRGATEIKQHPFFESVNWALIRCSTPPEVPKPVE 651
Score = 46.4 bits (95), Expect(2) = 1e-035
Identities = 20/35 (57%), Positives = 22/35 (62%)
Frame = -2 / -3
Query: 405 QLTPSKNGCCLISAAPLLVAILFWGSFTRSPRMRS 301
Q T SK GCCLIS APL L GS T PR++S
Sbjct: 602 QFTLSKKGCCLISVAPLFTPSLC*GSLTSKPRIKS 498
>gb|DT476893.1|DT476893 WS01231.B21_D17 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01231_D17 3', mRNA sequence
Length = 992
Score = 142 bits (304), Expect(2) = 1e-056
Identities = 54/70 (77%), Positives = 60/70 (85%)
Frame = +2 / -3
Query: 53 EPTDARSTSFVGTHEYLAPEIVRGEGHGSAVDWWTFGIFLYELLHGTTPFKGDSNRATLC 232
EPT ARS SFVGTHEYLAPEI++GEGHGSAVDWWTFGIFL+ELL+G TPFKG N TL
Sbjct: 660 EPTSARSNSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLFELLYGRTPFKGSGNEETLS 481
Query: 233 NVVDQPLRFP 262
NVV + L+FP
Sbjct: 480 NVVSRSLKFP 451
Score = 97.7 bits (207), Expect(2) = 1e-056
Identities = 38/59 (64%), Positives = 48/59 (81%)
Frame = +2 / -3
Query: 284 VSTVARDLIRGLLVKDPQKRIATRRGAAEIKQHPFFDGVNWALVRDAHPPSVPDPADLG 460
VS ARDLIRGLL+K+P R+ + +GAAEIKQHPFFDG+NWAL+R A PP +P+ D+G
Sbjct: 438 VSFHARDLIRGLLIKEPGDRLGSAKGAAEIKQHPFFDGLNWALIRCAIPPELPNQCDVG 262
Score = 97.3 bits (206), Expect(2) = 4e-029
Identities = 43/70 (61%), Positives = 51/70 (72%)
Frame = -2 / +2
Query: 261 GNRSGWSTTLHSVARLLSPLNGVVPWRSSYRKMPKVHQSTALPWPSPLTISGARYSCVPT 82
GN TTL +V+ PL GV+P+ SS RK+P VHQSTALP PSPL ISGARYS VPT
Sbjct: 452 GNLRLRDTTLDNVSSFPDPLKGVLPYNSSNRKIPNVHQSTALPCPSPLMISGARYSWVPT 631
Query: 81 NDVDRASVGS 52
+++RA VGS
Sbjct: 632 KELERALVGS 661
Score = 50.6 bits (104), Expect(2) = 4e-029
Identities = 24/41 (58%), Positives = 27/41 (65%)
Frame = -2 / +2
Query: 405 QLTPSKNGCCLISAAPLLVAILFWGSFTRSPRMRSRATVLT 283
QL PSK GCCLISAAPL GSF +P ++SRA LT
Sbjct: 317 QLRPSKKGCCLISAAPLADPSRSPGSFINNPLIKSRA*KLT 439
>gb|BU836496.1|BU836496 T087C12 Populus apical shoot cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 724
Score = 148 bits (318), Expect(2) = 1e-053
Identities = 55/73 (75%), Positives = 63/73 (86%)
Frame = +2 / +1
Query: 50 AEPTDARSTSFVGTHEYLAPEIVRGEGHGSAVDWWTFGIFLYELLHGTTPFKGDSNRATL 229
AEPTDAR SFVGTHEYLAPEI++GEGHG+AVDWWTFG+FLYELL+G TPFKG N TL
Sbjct: 358 AEPTDARPNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGVFLYELLYGITPFKGSGNEETL 537
Query: 230 CNVVDQPLRFPDA 268
NVV + L+FPD+
Sbjct: 538 ANVVSESLKFPDS 576
Score = 108 bits (231), Expect(2) = 4e-033
Identities = 49/72 (68%), Positives = 53/72 (73%)
Frame = -2 / -3
Query: 264 SGNRSGWSTTLHSVARLLSPLNGVVPWRSSYRKMPKVHQSTALPWPSPLTISGARYSCVP 85
SGN TTL SV+ PL GV+P+RSS RK PKVHQSTA PWPSPL ISGARYS VP
Sbjct: 572 SGNLRLSDTTLASVSSFPEPLKGVMPYRSS*RKTPKVHQSTAAPWPSPLIISGARYSWVP 393
Query: 84 TNDVDRASVGSA 49
T + RASVGSA
Sbjct: 392 TKEFGRASVGSA 357
Score = 81.3 bits (171), Expect(2) = 1e-053
Identities = 32/47 (68%), Positives = 39/47 (82%)
Frame = +2 / +1
Query: 284 VSTVARDLIRGLLVKDPQKRIATRRGAAEIKQHPFFDGVNWALVRDA 424
VS ARDLIR LLVK+P+ R+ T +GA EIKQHPFF+G+NWAL+R A
Sbjct: 583 VSFQARDLIRELLVKEPENRLGTHKGATEIKQHPFFEGLNWALIRCA 723
Score = 52.4 bits (108), Expect(2) = 4e-033
Identities = 25/41 (60%), Positives = 26/41 (63%)
Frame = -2 / -3
Query: 405 QLTPSKNGCCLISAAPLLVAILFWGSFTRSPRMRSRATVLT 283
Q PSK GCCLIS APL V LF GS T S +RS A LT
Sbjct: 704 QFKPSKKGCCLISVAPLCVPSLFSGSLTSSSLIRSLA*KLT 582
>gb|CK098382.1|CK098382 A012P77.5pR Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA clone A012P77 5', mRNA sequence
Length = 614
Score = 133 bits (286), Expect(3) = 4e-053
Identities = 51/63 (80%), Positives = 56/63 (88%)
Frame = +2 / +2
Query: 80 FVGTHEYLAPEIVRGEGHGSAVDWWTFGIFLYELLHGTTPFKGDSNRATLCNVVDQPLRF 259
F G+HEYLAPEI++GEGHGSAVDWWTFGIFLYELL G TPFKG NRATL NVV QPLRF
Sbjct: 164 FCGSHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQPLRF 343
Query: 260 PDA 268
P++
Sbjct: 344 PES 352
Score = 104 bits (222), Expect(2) = 4e-029
Identities = 42/60 (70%), Positives = 49/60 (81%)
Frame = -2 / -3
Query: 264 SGNRSGWSTTLHSVARLLSPLNGVVPWRSSYRKMPKVHQSTALPWPSPLTISGARYSCVP 85
SGN +GW TTL+SVAR +PL GV+P +SS R +P VHQSTALPWPSPL ISGA+YSC P
Sbjct: 348 SGNLNGWPTTLNSVARFPAPLKGVLPNKSS*RNIPNVHQSTALPWPSPLIISGAKYSCDP 169
Score = 84.5 bits (178), Expect(3) = 4e-053
Identities = 33/45 (73%), Positives = 38/45 (84%)
Frame = +2 / +2
Query: 284 VSTVARDLIRGLLVKDPQKRIATRRGAAEIKQHPFFDGVNWALVR 418
VS A+DLIRGLLVK+PQ R+A RRGA EIKQHPFF +NWAL+R
Sbjct: 359 VSFAAKDLIRGLLVKEPQHRLAYRRGATEIKQHPFFQSINWALIR 493
Score = 43.2 bits (88), Expect(2) = 4e-029
Identities = 22/41 (53%), Positives = 24/41 (58%)
Frame = -2 / -3
Query: 405 QLTPSKNGCCLISAAPLLVAILFWGSFTRSPRMRSRATVLT 283
QL KNGCC IS AP L A GSFT P ++S A LT
Sbjct: 480 QLML*KNGCCFISVAPRL*ARRCCGSFTSKPLIKSFAAKLT 358
Score = 28.6 bits (56), Expect(3) = 4e-053
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = +2 / +3
Query: 41 EFNAEPTDARSTSFVG 88
E AEPT+ARS SFVG
Sbjct: 126 ELIAEPTNARSMSFVG 173
>gb|DT507221.1|DT507221 WS02417.BR_K22 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02417_K22 5', mRNA sequence
Length = 644
Score = 113 bits (241), Expect(2) = 5e-051
Identities = 43/53 (81%), Positives = 47/53 (88%)
Frame = +2 / +1
Query: 110 EIVRGEGHGSAVDWWTFGIFLYELLHGTTPFKGDSNRATLCNVVDQPLRFPDA 268
EI++GEGHGSAVDWWTFGIFLYELL G TPFKG NRATL NVV QPLRFP++
Sbjct: 19 EIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPES 177
Score = 107 bits (229), Expect(2) = 5e-051
Identities = 41/61 (67%), Positives = 51/61 (83%)
Frame = +2 / +1
Query: 284 VSTVARDLIRGLLVKDPQKRIATRRGAAEIKQHPFFDGVNWALVRDAHPPSVPDPADLGR 463
VS ARDLIRGLLVK+PQ R+A++RGA EIKQHPFF+GVNWAL+R A PP +P P ++ R
Sbjct: 184 VSFAARDLIRGLLVKEPQHRLASKRGATEIKQHPFFEGVNWALIRCATPPEIPKPVEIER 363
Query: 464 V 466
+
Sbjct: 364 I 366
Score = 92.7 bits (196), Expect(2) = 2e-029
Identities = 39/55 (70%), Positives = 43/55 (78%)
Frame = -2 / -1
Query: 264 SGNRSGWSTTLHSVARLLSPLNGVVPWRSSYRKMPKVHQSTALPWPSPLTISGAR 100
SGNR GW TTL++VAR PL GV P +SSYRK+PKVHQSTALP PSPL IS R
Sbjct: 173 SGNRRGWPTTLNNVARFPDPLKGVFPNKSSYRKIPKVHQSTALP*PSPLMISSCR 9
Score = 56.5 bits (117), Expect(2) = 2e-029
Identities = 26/41 (63%), Positives = 26/41 (63%)
Frame = -2 / -1
Query: 405 QLTPSKNGCCLISAAPLLVAILFWGSFTRSPRMRSRATVLT 283
Q TPSK GCC IS AP L A L GSFT P MRS A LT
Sbjct: 305 QFTPSKKGCCFISVAPRLDANLCCGSFTSKPLMRSLAAKLT 183
>gb|DT511863.1|DT511863 WS02417.B21_K22 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02417_K22 3', mRNA sequence
Length = 644
Score = 113 bits (241), Expect(2) = 5e-051
Identities = 43/53 (81%), Positives = 47/53 (88%)
Frame = +2 / -1
Query: 110 EIVRGEGHGSAVDWWTFGIFLYELLHGTTPFKGDSNRATLCNVVDQPLRFPDA 268
EI++GEGHGSAVDWWTFGIFLYELL G TPFKG NRATL NVV QPLRFP++
Sbjct: 626 EIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPES 468
Score = 107 bits (229), Expect(2) = 5e-051
Identities = 41/61 (67%), Positives = 51/61 (83%)
Frame = +2 / -1
Query: 284 VSTVARDLIRGLLVKDPQKRIATRRGAAEIKQHPFFDGVNWALVRDAHPPSVPDPADLGR 463
VS ARDLIRGLLVK+PQ R+A++RGA EIKQHPFF+GVNWAL+R A PP +P P ++ R
Sbjct: 461 VSFAARDLIRGLLVKEPQHRLASKRGATEIKQHPFFEGVNWALIRCATPPEIPKPVEIER 282
Query: 464 V 466
+
Sbjct: 281 I 279
Score = 92.7 bits (196), Expect(2) = 2e-029
Identities = 39/55 (70%), Positives = 43/55 (78%)
Frame = -2 / +1
Query: 264 SGNRSGWSTTLHSVARLLSPLNGVVPWRSSYRKMPKVHQSTALPWPSPLTISGAR 100
SGNR GW TTL++VAR PL GV P +SSYRK+PKVHQSTALP PSPL IS R
Sbjct: 472 SGNRRGWPTTLNNVARFPDPLKGVFPNKSSYRKIPKVHQSTALP*PSPLMISSCR 636
Score = 56.5 bits (117), Expect(2) = 2e-029
Identities = 26/41 (63%), Positives = 26/41 (63%)
Frame = -2 / +1
Query: 405 QLTPSKNGCCLISAAPLLVAILFWGSFTRSPRMRSRATVLT 283
Q TPSK GCC IS AP L A L GSFT P MRS A LT
Sbjct: 340 QFTPSKKGCCFISVAPRLDANLCCGSFTSKPLMRSLAAKLT 462
>gb|CA931263.1|CA931263 MTU2TA.P4.H08 Aspen apex cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 491
Score = 126 bits (270), Expect(2) = 8e-051
Identities = 48/59 (81%), Positives = 53/59 (89%)
Frame = +2 / +1
Query: 92 HEYLAPEIVRGEGHGSAVDWWTFGIFLYELLHGTTPFKGDSNRATLCNVVDQPLRFPDA 268
HEYLAPEI++GEGHGSAVDWWTFGIFL+ELL+G TPFKG NRATL NVV Q LRFPD+
Sbjct: 1 HEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLRFPDS 177
Score = 94.1 bits (199), Expect(2) = 8e-051
Identities = 36/56 (64%), Positives = 45/56 (80%)
Frame = +2 / +1
Query: 287 STVARDLIRGLLVKDPQKRIATRRGAAEIKQHPFFDGVNWALVRDAHPPSVPDPAD 454
S +RDLIRGLLVK+PQ+R+ +RGA EI QHPFF+GVNWAL+R + PP VP P +
Sbjct: 187 SYASRDLIRGLLVKEPQQRLGVKRGATEI*QHPFFEGVNWALIRCSTPPEVPRPVE 354
Score = 90.9 bits (192), Expect(2) = 1e-027
Identities = 40/57 (70%), Positives = 44/57 (77%)
Frame = -2 / -1
Query: 264 SGNRSGWSTTLHSVARLLSPLNGVVPWRSSYRKMPKVHQSTALPWPSPLTISGARYS 94
SGN S TTL+ VAR PLNGV+P+ SS +KMP VHQSTALP PSPL ISGARYS
Sbjct: 173 SGNLSCCPTTLNRVARFPEPLNGVLPYNSSCKKMPNVHQSTALPCPSPLMISGARYS 3
Score = 51.9 bits (107), Expect(2) = 1e-027
Identities = 22/36 (61%), Positives = 24/36 (66%)
Frame = -2 / -1
Query: 405 QLTPSKNGCCLISAAPLLVAILFWGSFTRSPRMRSR 298
Q TPSK GCC IS APL L GSFT PR++SR
Sbjct: 305 QFTPSKKGCC*ISVAPLFTPNLC*GSFTSKPRIKSR 198
>gb|CN523462.1|CN523462 GQ015M10.T3_B08 GQ015 Populus trichocarpa x Populus deltoides cDNA
clone GQ015M10_B08 5', mRNA sequence
Length = 732
Score = 119 bits (255), Expect(2) = 9e-050
Identities = 47/62 (75%), Positives = 51/62 (82%)
Frame = +2 / +2
Query: 83 VGTHEYLAPEIVRGEGHGSAVDWWTFGIFLYELLHGTTPFKGDSNRATLCNVVDQPLRFP 262
VGTHEY A EI++GEGHGSAVDWWTFGI ELL G TPFKG NRATL NVV QPLRFP
Sbjct: 20 VGTHEYXAXEIIKGEGHGSAVDWWTFGIXXXELLFGKTPFKGAGNRATLFNVVGQPLRFP 199
Query: 263 DA 268
++
Sbjct: 200 ES 205
Score = 104 bits (221), Expect(2) = 4e-029
Identities = 42/64 (65%), Positives = 49/64 (76%)
Frame = -2 / -1
Query: 264 SGNRSGWSTTLHSVARLLSPLNGVVPWRSSYRKMPKVHQSTALPWPSPLTISGARYSCVP 85
SGN +GW TTL+SVAR +PL GV+P +SS +P VHQSTALPWPSPL IS A YSCVP
Sbjct: 201 SGNLNGWPTTLNSVARFPAPLKGVLPNKSSXXXIPNVHQSTALPWPSPLIISXAXYSCVP 22
Query: 84 TNDV 73
T +
Sbjct: 21 TXXI 10
Score = 97.3 bits (206), Expect(2) = 9e-050
Identities = 39/56 (69%), Positives = 44/56 (78%)
Frame = +2 / +2
Query: 284 VSTVARDLIRGLLVKDPQKRIATRRGAAEIKQHPFFDGVNWALVRDAHPPSVPDPA 451
VS ARDLIRGLLVK+PQ R+A RRGA EIKQHPFF +NWAL+R +PP VP A
Sbjct: 212 VSFAARDLIRGLLVKEPQHRLAYRRGATEIKQHPFFQSINWALIRCTNPPEVPKQA 379
Score = 43.7 bits (89), Expect(2) = 4e-029
Identities = 22/41 (53%), Positives = 24/41 (58%)
Frame = -2 / -1
Query: 405 QLTPSKNGCCLISAAPLLVAILFWGSFTRSPRMRSRATVLT 283
QL KNGCC IS AP L A GSFT P ++S A LT
Sbjct: 333 QLML*KNGCCFISVAPRL*ARRCCGSFTSKPLIKSLAAKLT 211
>gb|BI137613.1|BI137613 F089P39Y Populus flower cDNA library Populus trichocarpa cDNA, mRNA
sequence
Length = 482
Score = 142 bits (304), Expect(2) = 2e-048
Identities = 52/80 (65%), Positives = 64/80 (80%)
Frame = +2 / +1
Query: 23 DGSLQLEFNAEPTDARSTSFVGTHEYLAPEIVRGEGHGSAVDWWTFGIFLYELLHGTTPF 202
D ++ E AEP ARS SFVGTHEYLAPE++ G+GHGSAVDWWT G+FLYE+L+G TPF
Sbjct: 46 DEEVETELVAEPISARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGRTPF 225
Query: 203 KGDSNRATLCNVVDQPLRFP 262
KG++N TL N++ QPL FP
Sbjct: 226 KGENNEKTLINILKQPLTFP 285
Score = 94.5 bits (200), Expect(2) = 3e-025
Identities = 41/74 (55%), Positives = 48/74 (64%)
Frame = -2 / -1
Query: 261 GNRSGWSTTLHSVARLLSPLNGVVPWRSSYRKMPKVHQSTALPWPSPLTISGARYSCVPT 82
G G + L V L SPL GV+P+ SY+ P+VHQSTALPWP P SGA+YS VPT
Sbjct: 284 GKVKGCLSMLIKVFSLFSPLKGVLPYNISYKNTPRVHQSTALPWPCPDITSGAKYSWVPT 105
Query: 81 NDVDRASVGSALNS 40
D D A +GSA NS
Sbjct: 104 KDFDLALMGSATNS 63
Score = 70.7 bits (148), Expect(2) = 2e-048
Identities = 26/48 (54%), Positives = 36/48 (75%)
Frame = +2 / +1
Query: 299 RDLIRGLLVKDPQKRIATRRGAAEIKQHPFFDGVNWALVRDAHPPSVP 442
+DL+ LLVK+P++RI + +G+ EIK+H FF GVNWAL+R PP P
Sbjct: 334 QDLVGKLLVKNPKRRIGSLKGSVEIKRHEFFKGVNWALIRSIKPPESP 477
Score = 40.5 bits (82), Expect(2) = 3e-025
Identities = 19/35 (54%), Positives = 20/35 (57%)
Frame = -2 / -1
Query: 405 QLTPSKNGCCLISAAPLLVAILFWGSFTRSPRMRS 301
Q TP KN C LIS P + IL G FTRS RS
Sbjct: 440 QFTPLKNSCLLISTDPFKLPILLLGFFTRSLPTRS 336
>gb|DN489293.1|DN489293 T021A10.3pR Populus shoot meristem cDNA library Populus tremula x
Populus tremuloides cDNA clone T021A10 3', mRNA sequence
Length = 695
Score = 139 bits (298), Expect(2) = 1e-047
Identities = 51/74 (68%), Positives = 61/74 (82%)
Frame = +2 / -1
Query: 41 EFNAEPTDARSTSFVGTHEYLAPEIVRGEGHGSAVDWWTFGIFLYELLHGTTPFKGDSNR 220
E AEP ARS SFVGTHEYLAPE++ G+GHGSAVDWWT G+FLYE+L+G TPFKG++N
Sbjct: 524 ELVAEPISARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGRTPFKGENNE 345
Query: 221 ATLCNVVDQPLRFP 262
TL N++ QPL FP
Sbjct: 344 KTLINILKQPLTFP 303
Score = 93.2 bits (197), Expect(2) = 7e-025
Identities = 40/74 (54%), Positives = 48/74 (64%)
Frame = -2 / +1
Query: 261 GNRSGWSTTLHSVARLLSPLNGVVPWRSSYRKMPKVHQSTALPWPSPLTISGARYSCVPT 82
G G + L V L SPL GV+P+ SY+ P+VHQSTALPWP P SGA+YS VPT
Sbjct: 304 GKVKGCLSMLIKVFSLFSPLKGVLPYNISYKNTPRVHQSTALPWPCPDITSGAKYSWVPT 483
Query: 81 NDVDRASVGSALNS 40
D D A +GSA +S
Sbjct: 484 KDFDLALIGSATSS 525
Score = 70.7 bits (148), Expect(2) = 1e-047
Identities = 26/48 (54%), Positives = 36/48 (75%)
Frame = +2 / -1
Query: 299 RDLIRGLLVKDPQKRIATRRGAAEIKQHPFFDGVNWALVRDAHPPSVP 442
+DL+ LLVK+P++RI + +G+ EIK+H FF GVNWAL+R PP P
Sbjct: 254 QDLVGKLLVKNPKRRIGSLKGSVEIKRHEFFKGVNWALIRSIKPPESP 111
Score = 40.5 bits (82), Expect(2) = 7e-025
Identities = 19/35 (54%), Positives = 20/35 (57%)
Frame = -2 / +1
Query: 405 QLTPSKNGCCLISAAPLLVAILFWGSFTRSPRMRS 301
Q TP KN C LIS P + IL G FTRS RS
Sbjct: 148 QFTPLKNSCLLISTDPFKLPILLLGFFTRSLPTRS 252
>gb|CV261185.1|CV261185 WS02016.B21_B13 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02016_B13 3', mRNA sequence
Length = 592
Score = 130 bits (279), Expect(2) = 1e-047
Identities = 50/74 (67%), Positives = 57/74 (77%)
Frame = +2 / -2
Query: 41 EFNAEPTDARSTSFVGTHEYLAPEIVRGEGHGSAVDWWTFGIFLYELLHGTTPFKGDSNR 220
EF AEP D RS SFVGTHEYLAPEIV GEGHGS VDWWT GIF++EL +G TPF+G +
Sbjct: 510 EFVAEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFMFELFYGVTPFRGVDHE 331
Query: 221 ATLCNVVDQPLRFP 262
TL N+V + L FP
Sbjct: 330 LTLANIVARALEFP 289
Score = 103 bits (219), Expect(2) = 4e-028
Identities = 45/74 (60%), Positives = 51/74 (68%)
Frame = -2 / +2
Query: 261 GNRSGWSTTLHSVARLLSPLNGVVPWRSSYRKMPKVHQSTALPWPSPLTISGARYSCVPT 82
GN S +T L V+ +PL GV P SS +P VHQST LPWPSP TISGA+YS VPT
Sbjct: 290 GNSSARATILARVSSWSTPLKGVTP*NSSNMNIPSVHQSTGLPWPSPDTISGAKYSWVPT 469
Query: 81 NDVDRASVGSALNS 40
ND+DR S GSA NS
Sbjct: 470 NDMDRTSTGSATNS 511
Score = 79.0 bits (166), Expect(2) = 1e-047
Identities = 31/55 (56%), Positives = 38/55 (69%)
Frame = +2 / -2
Query: 284 VSTVARDLIRGLLVKDPQKRIATRRGAAEIKQHPFFDGVNWALVRDAHPPSVPDP 448
V A+DLI LLVKDP +R+ + GA+ +K HPFF GVNWAL+R PP VP P
Sbjct: 276 VPATAKDLISQLLVKDPARRMGSTMGASAVKHHPFFQGVNWALLRCTPPPYVPPP 112
Score = 41.4 bits (84), Expect(2) = 4e-028
Identities = 17/53 (32%), Positives = 30/53 (56%)
Frame = -1 / +1
Query: 442 RDRRWVSIPDECPVDPIKERVLLDLSCTPPGGDSLLGVLHQKPTDEVPGDGAH 284
R+ RW +CP++P+++R++LD CT G S + +Q ++V G H
Sbjct: 118 RNIRWRCTSQQCPINPLEKRMVLDCRCTHGGTHSSCRIFNQ*LRNKVLCCGRH 276
>gb|CV241963.1|CV241963 WS02513.B21_M01 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02513_M01 3', mRNA sequence
Length = 754
Score = 130 bits (278), Expect(2) = 2e-047
Identities = 49/74 (66%), Positives = 57/74 (77%)
Frame = +2 / -3
Query: 41 EFNAEPTDARSTSFVGTHEYLAPEIVRGEGHGSAVDWWTFGIFLYELLHGTTPFKGDSNR 220
EF AEP D RS SF+GTHEYLAPEIV GEGHGS VDWWT GIF++EL +G TPF+G +
Sbjct: 524 EFVAEPVDVRSMSFIGTHEYLAPEIVSGEGHGSPVDWWTLGIFMFELFYGVTPFRGVDHE 345
Query: 221 ATLCNVVDQPLRFP 262
TL N+V + L FP
Sbjct: 344 LTLANIVARALEFP 303
Score = 101 bits (215), Expect(2) = 2e-026
Identities = 44/74 (59%), Positives = 50/74 (67%)
Frame = -2 / +1
Query: 261 GNRSGWSTTLHSVARLLSPLNGVVPWRSSYRKMPKVHQSTALPWPSPLTISGARYSCVPT 82
GN S +T L V+ +PL GV P SS +P VHQST LPWPSP TISGA+YS VP
Sbjct: 304 GNSSARATILARVSSWSTPLKGVTP*NSSNMNIPSVHQSTGLPWPSPDTISGAKYSWVPI 483
Query: 81 NDVDRASVGSALNS 40
ND+DR S GSA NS
Sbjct: 484 NDIDRTSTGSATNS 525
Score = 79.0 bits (166), Expect(2) = 2e-047
Identities = 31/55 (56%), Positives = 38/55 (69%)
Frame = +2 / -3
Query: 284 VSTVARDLIRGLLVKDPQKRIATRRGAAEIKQHPFFDGVNWALVRDAHPPSVPDP 448
V A+DLI LLVKDP +R+ + GA+ +K HPFF GVNWAL+R PP VP P
Sbjct: 290 VPATAKDLISQLLVKDPARRMGSTMGASAVKHHPFFQGVNWALLRCTPPPYVPPP 126
Score = 37.7 bits (76), Expect(2) = 2e-026
Identities = 15/49 (30%), Positives = 27/49 (55%)
Frame = -1 / +3
Query: 430 WVSIPDECPVDPIKERVLLDLSCTPPGGDSLLGVLHQKPTDEVPGDGAH 284
W +CP++P+++R++LD CT G S + +Q ++V G H
Sbjct: 144 WRCTSQQCPINPLEKRMVLDCRCTHGGTHSSCRIFNQ*LRNKVLCCGRH 290
>gb|DN499789.1|DN499789 T087C12.5pR Populus shoot meristem cDNA library Populus tremula x
Populus tremuloides cDNA clone T087C12 5', mRNA sequence
Length = 852
Score = 148 bits (318), Expect(2) = 2e-046
Identities = 55/73 (75%), Positives = 63/73 (86%)
Frame = +2 / +3
Query: 50 AEPTDARSTSFVGTHEYLAPEIVRGEGHGSAVDWWTFGIFLYELLHGTTPFKGDSNRATL 229
AEPTDAR SFVGTHEYLAPEI++GEGHG+AVDWWTFG+FLYELL+G TPFKG N TL
Sbjct: 357 AEPTDARPNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGVFLYELLYGITPFKGSGNEETL 536
Query: 230 CNVVDQPLRFPDA 268
NVV + L+FPD+
Sbjct: 537 ANVVSESLKFPDS 575
Score = 108 bits (231), Expect(2) = 2e-028
Identities = 49/72 (68%), Positives = 53/72 (73%)
Frame = -2 / -3
Query: 264 SGNRSGWSTTLHSVARLLSPLNGVVPWRSSYRKMPKVHQSTALPWPSPLTISGARYSCVP 85
SGN TTL SV+ PL GV+P+RSS RK PKVHQSTA PWPSPL ISGARYS VP
Sbjct: 571 SGNLRLSDTTLASVSSFPEPLKGVMPYRSS*RKTPKVHQSTAAPWPSPLIISGARYSWVP 392
Query: 84 TNDVDRASVGSA 49
T + RASVGSA
Sbjct: 391 TKEFGRASVGSA 356
Score = 57.4 bits (119), Expect(2) = 2e-046
Identities = 22/37 (59%), Positives = 27/37 (72%)
Frame = +2 / +2
Query: 350 TRRGAAEIKQHPFFDGVNWALVRDAHPPSVPDPADLG 460
T +GA EIKQHPFF+G+NWAL+R A PP + LG
Sbjct: 650 THKGATEIKQHPFFEGLNWALIRCAIPPEYQNCMILG 760
Score = 36.8 bits (74), Expect(2) = 2e-028
Identities = 14/19 (73%), Positives = 14/19 (73%)
Frame = -2 / -1
Query: 405 QLTPSKNGCCLISAAPLLV 349
Q PSK GCCLIS APL V
Sbjct: 705 QFKPSKKGCCLISVAPLCV 649
>gb|CF228348.1|CF228348 PtaXM0011H7H0715 Poplar cDNA library from mature xylem Populus alba
x Populus tremula cDNA 5', mRNA sequence
Length = 645
Score = 128 bits (275), Expect(2) = 5e-046
Identities = 49/75 (65%), Positives = 58/75 (77%)
Frame = +2 / +1
Query: 38 LEFNAEPTDARSTSFVGTHEYLAPEIVRGEGHGSAVDWWTFGIFLYELLHGTTPFKGDSN 217
L+ AEP D RS SFVGTHEYLAPEIV GEGHG+AVDWWT GIF++E+ +G TPFKG +
Sbjct: 178 LKIVAEPIDVRSMSFVGTHEYLAPEIVSGEGHGNAVDWWTLGIFMFEMFYGVTPFKGMDH 357
Query: 218 RATLCNVVDQPLRFP 262
TL N+V + L FP
Sbjct: 358 ELTLANIVARALEFP 402
Score = 93.6 bits (198), Expect(2) = 7e-023
Identities = 43/71 (60%), Positives = 47/71 (66%)
Frame = -2 / -2
Query: 261 GNRSGWSTTLHSVARLLSPLNGVVPWRSSYRKMPKVHQSTALPWPSPLTISGARYSCVPT 82
GN +T V PLNGV P S MPKVHQSTALP PSP TISGA+YS VPT
Sbjct: 401 GNSRARATMFARVNSWSIPLNGVTP*NISNMNMPKVHQSTALPCPSPDTISGAKYSWVPT 222
Query: 81 NDVDRASVGSA 49
ND+DR S+GSA
Sbjct: 221 NDMDRTSIGSA 189
Score = 75.8 bits (159), Expect(2) = 5e-046
Identities = 28/55 (50%), Positives = 38/55 (69%)
Frame = +2 / +1
Query: 284 VSTVARDLIRGLLVKDPQKRIATRRGAAEIKQHPFFDGVNWALVRDAHPPSVPDP 448
+ +A+DLI LL+KDP +R+ + GA IK H FFDG+NWAL+R PP +P P
Sbjct: 415 IPVLAKDLITQLLIKDPVRRLGSTMGATAIKHHQFFDGINWALLRCRTPPYIPRP 579
Score = 33.1 bits (66), Expect(2) = 7e-023
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = -1 / -1
Query: 448 RVRDRRWVSIPDECPVDPIKERVLLDLSCTPPGGDSLLGVLHQKPTDEV 302
R R+ RW S P + PV P+K+ ++ D + S G+ +K D+V
Sbjct: 579 RPRNIRWCSAP*QRPVYPVKKLMVFDGRSSHGRTQSSYGIFDEKLGDQV 433
>gb|BI135709.1|BI135709 F057P33Y Populus flower cDNA library Populus trichocarpa cDNA, mRNA
sequence
Length = 452
Score = 142 bits (304), Expect(2) = 2e-045
Identities = 52/80 (65%), Positives = 64/80 (80%)
Frame = +2 / +1
Query: 23 DGSLQLEFNAEPTDARSTSFVGTHEYLAPEIVRGEGHGSAVDWWTFGIFLYELLHGTTPF 202
D ++ E AEP ARS SFVGTHEYLAPE++ G+GHGSAVDWWT G+FLYE+L+G TPF
Sbjct: 46 DEEVETELVAEPISARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGRTPF 225
Query: 203 KGDSNRATLCNVVDQPLRFP 262
KG++N TL N++ QPL FP
Sbjct: 226 KGENNEKTLINILKQPLTFP 285
Score = 94.5 bits (200), Expect(2) = 3e-025
Identities = 41/74 (55%), Positives = 48/74 (64%)
Frame = -2 / -1
Query: 261 GNRSGWSTTLHSVARLLSPLNGVVPWRSSYRKMPKVHQSTALPWPSPLTISGARYSCVPT 82
G G + L V L SPL GV+P+ SY+ P+VHQSTALPWP P SGA+YS VPT
Sbjct: 284 GKVKGCLSMLIKVFSLFSPLKGVLPYNISYKNTPRVHQSTALPWPCPDITSGAKYSWVPT 105
Query: 81 NDVDRASVGSALNS 40
D D A +GSA NS
Sbjct: 104 KDFDLALMGSATNS 63
Score = 60.6 bits (126), Expect(2) = 2e-045
Identities = 22/39 (56%), Positives = 32/39 (82%)
Frame = +2 / +1
Query: 299 RDLIRGLLVKDPQKRIATRRGAAEIKQHPFFDGVNWALV 415
+DL+ LLVK+P++RI + +G+ EIK+H FF GVNWAL+
Sbjct: 334 QDLVGKLLVKNPKRRIGSLKGSVEIKRHEFFKGVNWALI 450
Score = 40.5 bits (82), Expect(2) = 3e-025
Identities = 19/35 (54%), Positives = 20/35 (57%)
Frame = -2 / -1
Query: 405 QLTPSKNGCCLISAAPLLVAILFWGSFTRSPRMRS 301
Q TP KN C LIS P + IL G FTRS RS
Sbjct: 440 QFTPLKNSCLLISTDPFKLPILLLGFFTRSLPTRS 336
>gb|BI137634.1|BI137634 F089P73Y Populus flower cDNA library Populus trichocarpa cDNA, mRNA
sequence
Length = 471
Score = 143 bits (307), Expect(2) = 2e-042
Identities = 53/85 (62%), Positives = 65/85 (76%)
Frame = +2 / +1
Query: 8 DSSIKDGSLQLEFNAEPTDARSTSFVGTHEYLAPEIVRGEGHGSAVDWWTFGIFLYELLH 187
D D ++ E AEP ARS SFVGTHEYLAPE++ G+GHGSAVDWWT G+FLYE+L+
Sbjct: 31 DGQAYDEEVETELVAEPISARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY 210
Query: 188 GTTPFKGDSNRATLCNVVDQPLRFP 262
G TPFKG++N TL N++ QPL FP
Sbjct: 211 GRTPFKGENNEKTLINILKQPLTFP 285
Score = 94.5 bits (200), Expect(2) = 4e-021
Identities = 41/74 (55%), Positives = 48/74 (64%)
Frame = -2 / -2
Query: 261 GNRSGWSTTLHSVARLLSPLNGVVPWRSSYRKMPKVHQSTALPWPSPLTISGARYSCVPT 82
G G + L V L SPL GV+P+ SY+ P+VHQSTALPWP P SGA+YS VPT
Sbjct: 284 GKVKGCLSMLIKVFSLFSPLKGVLPYNISYKNTPRVHQSTALPWPCPDITSGAKYSWVPT 105
Query: 81 NDVDRASVGSALNS 40
D D A +GSA NS
Sbjct: 104 KDFDLALMGSATNS 63
Score = 49.2 bits (101), Expect(2) = 2e-042
Identities = 17/34 (50%), Positives = 23/34 (67%)
Frame = +2 / +2
Query: 332 PQKRIATRRGAAEIKQHPFFDGVNWALVRDAHPP 433
P+ + +G+ EIK+H FF GVNWAL+R PP
Sbjct: 368 PKGELGA*KGSVEIKRHEFFKGVNWALIRSIKPP 469
Score = 26.3 bits (51), Expect(2) = 4e-021
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -2 / -1
Query: 405 QLTPSKNGCCLISAAP 358
Q TP KN C LIS P
Sbjct: 441 QFTPLKNSCLLISTDP 394
>gb|AI162152.1|AI162152 A012P77U Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA 5', mRNA sequence
Length = 481
Score = 156 bits (335), Expect(2) = 8e-042
Identities = 62/76 (81%), Positives = 67/76 (88%)
Frame = +2 / +2
Query: 41 EFNAEPTDARSTSFVGTHEYLAPEIVRGEGHGSAVDWWTFGIFLYELLHGTTPFKGDSNR 220
E AEPT+ARS SFVGTHEYLAPEI++GEGHGSAVDWWTFGIFLYELL G TPFKG NR
Sbjct: 104 ELIAEPTNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNR 283
Query: 221 ATLCNVVDQPLRFPDA 268
ATL NVV QPLRFP++
Sbjct: 284 ATLFNVVGQPLRFPES 331
Score = 129 bits (277), Expect = 1e-029
Identities = 52/75 (69%), Positives = 63/75 (84%)
Frame = -2 / -2
Query: 264 SGNRSGWSTTLHSVARLLSPLNGVVPWRSSYRKMPKVHQSTALPWPSPLTISGARYSCVP 85
SGN +GW TTL+SVAR +PL GV+P +SS R +P VHQSTALPWPSPL ISGA+YSCVP
Sbjct: 327 SGNLNGWPTTLNSVARFPAPLKGVLPNKSS*RNIPNVHQSTALPWPSPLIISGAKYSCVP 148
Query: 84 TNDVDRASVGSALNS 40
T D++RA VGSA++S
Sbjct: 147 TKDIERAFVGSAMSS 103
Score = 34.1 bits (68), Expect(2) = 8e-042
Identities = 15/27 (55%), Positives = 20/27 (74%)
Frame = +2 / +2
Query: 284 VSTVARDLIRGLLVKDPQKRIATRRGA 364
VS A+DL + LLVK+PQ R+A R G+
Sbjct: 338 VSFAAKDLDQRLLVKEPQHRLAYRXGS 418
>gb|CV259744.1|CV259744 WS02012.B21_C15 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02012_C15 3', mRNA sequence
Length = 775
Score = 105 bits (225), Expect(2) = 2e-039
Identities = 38/68 (55%), Positives = 50/68 (73%)
Frame = +2 / -2
Query: 71 STSFVGTHEYLAPEIVRGEGHGSAVDWWTFGIFLYELLHGTTPFKGDSNRATLCNVVDQP 250
S SFVGT EY+APEI+ G GH SAVDWW GI LYE+L+G TPF+G + + T N++ +
Sbjct: 726 SNSFVGTEEYIAPEIITGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKD 547
Query: 251 LRFPDATP 274
L+FP + P
Sbjct: 546 LKFPGSIP 523
Score = 76.7 bits (161), Expect(2) = 2e-039
Identities = 30/57 (52%), Positives = 41/57 (71%)
Frame = +2 / -2
Query: 278 VPVSTVARDLIRGLLVKDPQKRIATRRGAAEIKQHPFFDGVNWALVRDAHPPSVPDP 448
+PVS A+ L+ LL +DP+ R+ +R GA +IK+HPFF GVNWALVR +PP + P
Sbjct: 528 IPVSLNAKQLMYRLLHRDPKNRLGSREGANDIKRHPFFKGVNWALVRCLNPPELEAP 358
>gb|DN486644.1|DN486644 P047G09.3pR Populus petioles cDNA library Populus tremula cDNA
clone P047G09 3', mRNA sequence
Length = 759
Score = 105 bits (223), Expect(2) = 2e-038
Identities = 38/68 (55%), Positives = 49/68 (72%)
Frame = +2 / -3
Query: 71 STSFVGTHEYLAPEIVRGEGHGSAVDWWTFGIFLYELLHGTTPFKGDSNRATLCNVVDQP 250
S SFVGT EY+APEI+ G GH SAVDWW GI LYE+L+G TPF+G + + T N++ +
Sbjct: 652 SNSFVGTEEYIAPEIITGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKD 473
Query: 251 LRFPDATP 274
L+FP P
Sbjct: 472 LKFPGRIP 449
Score = 73.9 bits (155), Expect(2) = 2e-038
Identities = 29/57 (50%), Positives = 40/57 (70%)
Frame = +2 / -3
Query: 278 VPVSTVARDLIRGLLVKDPQKRIATRRGAAEIKQHPFFDGVNWALVRDAHPPSVPDP 448
+PVS A+ + LL +DP+ R+ +R GA +IK+HPFF GVNWALVR +PP + P
Sbjct: 454 IPVSLNAKQSMYRLLHRDPKNRLGSREGANDIKRHPFFKGVNWALVRCLNPPELEAP 284
>gb|CX168744.1|CX168744 E01_69-81_09.ab1 leaf inoculated with Marssonia pathogen of Populus
deltoides Populus deltoides cDNA, mRNA sequence
Length = 584
Score = 105 bits (223), Expect(2) = 1e-037
Identities = 38/68 (55%), Positives = 49/68 (72%)
Frame = +2 / +3
Query: 71 STSFVGTHEYLAPEIVRGEGHGSAVDWWTFGIFLYELLHGTTPFKGDSNRATLCNVVDQP 250
S SFVGT EY+APEI+ G GH SAVDWW GI LYE+L+G TPF+G + + T N++ +
Sbjct: 165 SNSFVGTEEYIAPEIISGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKD 344
Query: 251 LRFPDATP 274
L+FP P
Sbjct: 345 LKFPGRIP 368
Score = 71.2 bits (149), Expect(2) = 1e-037
Identities = 28/57 (49%), Positives = 40/57 (70%)
Frame = +2 / +3
Query: 278 VPVSTVARDLIRGLLVKDPQKRIATRRGAAEIKQHPFFDGVNWALVRDAHPPSVPDP 448
+PVS A+ L+ LL +DP+ R+ + GA +IK+HPFF GV+WALVR +PP + P
Sbjct: 363 IPVSLNAKQLMYRLLHRDPKNRLGSLEGANDIKRHPFFKGVSWALVRCLNPPELEAP 533
>gb|DV463015.1|DV463015 MTUNUL1.P10.F03 NUL Populus fremontii x Populus angustifolia cDNA,
mRNA sequence
Length = 792
Score = 82.6 bits (174), Expect(2) = 1e-031
Identities = 28/45 (62%), Positives = 36/45 (80%)
Frame = +2 / -3
Query: 104 APEIVRGEGHGSAVDWWTFGIFLYELLHGTTPFKGDSNRATLCNV 238
APE++ G GHG+ VDWW FG+ +YELL+GTTPFKG S +TL N+
Sbjct: 790 APELLSGNGHGNGVDWWAFGVLVYELLYGTTPFKGGSKESTLRNI 656
Score = 73.5 bits (154), Expect(2) = 1e-031
Identities = 26/48 (54%), Positives = 37/48 (77%)
Frame = +2 / -3
Query: 296 ARDLIRGLLVKDPQKRIATRRGAAEIKQHPFFDGVNWALVRDAHPPSV 439
ARDL+ LLVK+P++R+ +GA +IK+HPFFDG+ W L+R+ PP V
Sbjct: 595 ARDLVEKLLVKNPRQRLGCIKGATDIKRHPFFDGIKWPLIRNYKPPEV 452
>gb|CV254493.1|CV254493 WS0241.B21_G02 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS0241_G02 3', mRNA sequence
Length = 895
Score = 98.2 bits (208), Expect(2) = 4e-031
Identities = 36/58 (62%), Positives = 45/58 (77%)
Frame = +2 / -3
Query: 68 RSTSFVGTHEYLAPEIVRGEGHGSAVDWWTFGIFLYELLHGTTPFKGDSNRATLCNVV 241
RS SFVGT EY++PE+VRG+GH AVDWW GI YE+L+GTTPFKG + + T NV+
Sbjct: 725 RSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILSYEMLYGTTPFKGKNRKETFRNVL 552
Score = 56.5 bits (117), Expect(2) = 4e-031
Identities = 23/44 (52%), Positives = 29/44 (65%)
Frame = +2 / -3
Query: 302 DLIRGLLVKDPQKRIATRRGAAEIKQHPFFDGVNWALVRDAHPP 433
DLI LL KDP +R+ +RGA EIK+H FF GV W L+ + P
Sbjct: 509 DLIERLLEKDPTQRLGYQRGACEIKEHGFFKGVRWDLLTEVLRP 378
>gb|DT518009.1|DT518009 WS02435.B21_P01 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02435_P01 3', mRNA sequence
Length = 869
Score = 98.2 bits (208), Expect(2) = 4e-031
Identities = 36/58 (62%), Positives = 45/58 (77%)
Frame = +2 / -3
Query: 68 RSTSFVGTHEYLAPEIVRGEGHGSAVDWWTFGIFLYELLHGTTPFKGDSNRATLCNVV 241
RS SFVGT EY++PE+VRG+GH AVDWW GI YE+L+GTTPFKG + + T NV+
Sbjct: 726 RSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILSYEMLYGTTPFKGKNRKETFRNVL 553
Score = 56.5 bits (117), Expect(2) = 4e-031
Identities = 23/44 (52%), Positives = 29/44 (65%)
Frame = +2 / -3
Query: 302 DLIRGLLVKDPQKRIATRRGAAEIKQHPFFDGVNWALVRDAHPP 433
DLI LL KDP +R+ +RGA EIK+H FF GV W L+ + P
Sbjct: 510 DLIERLLEKDPTQRLGYQRGACEIKEHGFFKGVRWDLLTEVLRP 379
>gb|CF232477.1|CF232477 PtaJXO0011A11A1101 Poplar cDNA library from young opposite xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 649
Score = 93.2 bits (197), Expect(2) = 2e-030
Identities = 34/58 (58%), Positives = 44/58 (75%)
Frame = +2 / +1
Query: 68 RSTSFVGTHEYLAPEIVRGEGHGSAVDWWTFGIFLYELLHGTTPFKGDSNRATLCNVV 241
RS SFVGT EY++PE+VRG+GH AVDWW GI +E+L+GTTPF G + + T NV+
Sbjct: 238 RSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILSFEMLYGTTPFVGKNRKETFRNVL 411
Score = 58.8 bits (122), Expect(2) = 2e-030
Identities = 25/58 (43%), Positives = 33/58 (56%)
Frame = +2 / +1
Query: 302 DLIRGLLVKDPQKRIATRRGAAEIKQHPFFDGVNWALVRDAHPPSVPDPADLGRVASK 475
DLI LL KDP +R+ +RGA EIK+H FF GV W L+ + P D G + +
Sbjct: 454 DLIERLLEKDPTQRLGYQRGACEIKEHVFFKGVRWDLLTEVLXPPFIXLXDXGELTER 627
>gb|DT517326.1|DT517326 WS02433.B21_P21 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02433_P21 3', mRNA sequence
Length = 760
Score = 93.6 bits (198), Expect(2) = 3e-030
Identities = 35/64 (54%), Positives = 46/64 (71%)
Frame = +2 / -1
Query: 68 RSTSFVGTHEYLAPEIVRGEGHGSAVDWWTFGIFLYELLHGTTPFKGDSNRATLCNVVDQ 247
RS SFVGT EY++PE+VRG+GH AVDWW GI +E+L+GTTPF G + + T NV+ +
Sbjct: 733 RSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILSFEMLYGTTPFVGKNRKETFRNVLAK 554
Query: 248 PLRF 259
F
Sbjct: 553 KPEF 542
Score = 57.9 bits (120), Expect(2) = 3e-030
Identities = 25/58 (43%), Positives = 33/58 (56%)
Frame = +2 / -1
Query: 302 DLIRGLLVKDPQKRIATRRGAAEIKQHPFFDGVNWALVRDAHPPSVPDPADLGRVASK 475
DLI LL KDP +R+ +RGA EIK+H FF GV W L+ + P D G + +
Sbjct: 517 DLIERLLEKDPTQRLGYQRGACEIKEHVFFKGVRWDLLTEVLRPPFIPSRDDGELTER 344
>gb|DT481483.1|DT481483 WS02532.BR_A02 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02532_A02 5', mRNA sequence
Length = 880
Score = 80.8 bits (170), Expect(2) = 2e-029
Identities = 27/55 (49%), Positives = 38/55 (69%)
Frame = +2 / +2
Query: 110 EIVRGEGHGSAVDWWTFGIFLYELLHGTTPFKGDSNRATLCNVVDQPLRFPDATP 274
EI+ G GH SA+DWW GI LYE+L+G TPF+G + + T N++ + L FP + P
Sbjct: 236 EIITGMGHSSAIDWWALGILLYEMLYGRTPFRGKNRQKTFANILHKDLTFPSSIP 400
Score = 68.4 bits (143), Expect(2) = 2e-029
Identities = 26/47 (55%), Positives = 33/47 (70%)
Frame = +2 / +2
Query: 278 VPVSTVARDLIRGLLVKDPQKRIATRRGAAEIKQHPFFDGVNWALVR 418
+PVS R LI LL +DP R+ ++ GA EIKQHPFF G+NW L+R
Sbjct: 395 IPVSLSGRQLINALLNRDPSIRLGSKAGANEIKQHPFFRGINWPLIR 535
>gb|DT486813.1|DT486813 WS02532.B21_A02 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02532_A02 3', mRNA sequence
Length = 880
Score = 80.8 bits (170), Expect(2) = 2e-029
Identities = 27/55 (49%), Positives = 38/55 (69%)
Frame = +2 / -2
Query: 110 EIVRGEGHGSAVDWWTFGIFLYELLHGTTPFKGDSNRATLCNVVDQPLRFPDATP 274
EI+ G GH SA+DWW GI LYE+L+G TPF+G + + T N++ + L FP + P
Sbjct: 645 EIITGMGHSSAIDWWALGILLYEMLYGRTPFRGKNRQKTFANILHKDLTFPSSIP 481
Score = 68.4 bits (143), Expect(2) = 2e-029
Identities = 26/47 (55%), Positives = 33/47 (70%)
Frame = +2 / -2
Query: 278 VPVSTVARDLIRGLLVKDPQKRIATRRGAAEIKQHPFFDGVNWALVR 418
+PVS R LI LL +DP R+ ++ GA EIKQHPFF G+NW L+R
Sbjct: 486 IPVSLSGRQLINALLNRDPSIRLGSKAGANEIKQHPFFRGINWPLIR 346
>gb|BI129456.1|BI129456 G090P88Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 520
Score = 127 bits (272), Expect = 6e-029
Identities = 48/59 (81%), Positives = 52/59 (88%)
Frame = +2 / +2
Query: 53 EPTDARSTSFVGTHEYLAPEIVRGEGHGSAVDWWTFGIFLYELLHGTTPFKGDSNRATL 229
EPT ARS SFVGTHEYLAPEI++GEGHGSAVDWWTFGIFL+ELL+G TPFKG N TL
Sbjct: 332 EPTSARSNSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLFELLYGRTPFKGSGNEETL 508
>gb|CV264069.1|CV264069 WS02023.B21_I14 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02023_I14 3', mRNA sequence
Length = 423
Score = 79.0 bits (166), Expect(2) = 2e-028
Identities = 31/55 (56%), Positives = 38/55 (69%)
Frame = +2 / -1
Query: 284 VSTVARDLIRGLLVKDPQKRIATRRGAAEIKQHPFFDGVNWALVRDAHPPSVPDP 448
V A+DLI LLVKDP +R+ + GA+ +K HPFF GVNWAL+R PP VP P
Sbjct: 288 VPATAKDLISQLLVKDPARRMGSTMGASAVKHHPFFQGVNWALLRCTPPPYVPPP 124
Score = 66.6 bits (139), Expect(2) = 2e-028
Identities = 23/41 (56%), Positives = 30/41 (73%)
Frame = +2 / -1
Query: 140 AVDWWTFGIFLYELLHGTTPFKGDSNRATLCNVVDQPLRFP 262
AVDWWT GIF++EL +G TPF+G + TL N+V + L FP
Sbjct: 423 AVDWWTLGIFMFELFYGVTPFRGVDHELTLANIVARALEFP 301
>gb|DT520021.1|DT520021 WS02446.B21.1_F15 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02446_F15 3', mRNA sequence
Length = 911
Score = 97.3 bits (206), Expect(2) = 9e-028
Identities = 39/56 (69%), Positives = 44/56 (78%)
Frame = +2 / -2
Query: 284 VSTVARDLIRGLLVKDPQKRIATRRGAAEIKQHPFFDGVNWALVRDAHPPSVPDPA 451
VS ARDLIRGLLVK+PQ R+A RRGA EIKQHPFF +NWAL+R +PP VP A
Sbjct: 832 VSFAARDLIRGLLVKEPQHRLAYRRGATEIKQHPFFQSINWALIRCTNPPEVPKQA 665
Score = 46.0 bits (94), Expect(2) = 9e-028
Identities = 18/24 (75%), Positives = 20/24 (83%)
Frame = +2 / -2
Query: 197 PFKGDSNRATLCNVVDQPLRFPDA 268
PFKG NRATL NVV QPLRFP++
Sbjct: 910 PFKGAGNRATLYNVVGQPLRFPES 839
>gb|BU813391.1|BU813391 N009H07 Populus bark cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 386
Score = 105 bits (224), Expect = 3e-022
Identities = 41/48 (85%), Positives = 44/48 (91%)
Frame = +2 / +3
Query: 41 EFNAEPTDARSTSFVGTHEYLAPEIVRGEGHGSAVDWWTFGIFLYELL 184
E AEPT ARS SFVGTHEYLAPEI++GEGHGSAVDWWTFGIFL+ELL
Sbjct: 243 ELVAEPTAARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELL 386
>gb|BP933399.1|BP933399 BP933399 full-length enriched poplar cDNA library Populus nigra
cDNA clone PnFL1-050_O04.r 3', mRNA sequence
Length = 652
Score = 93.6 bits (198), Expect(2) = 2e-021
Identities = 36/55 (65%), Positives = 44/55 (80%)
Frame = +2 / -1
Query: 296 ARDLIRGLLVKDPQKRIATRRGAAEIKQHPFFDGVNWALVRDAHPPSVPDPADLG 460
ARDLIR LLVK+P+ R+ T +GA EIKQHPFF+G+NWAL+R A PP VP+ D G
Sbjct: 577 ARDLIRELLVKEPENRLGTHKGATEIKQHPFFEGLNWALIRCAIPPEVPELYDFG 413
Score = 28.1 bits (55), Expect(2) = 2e-021
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = +2 / -1
Query: 215 NRATLCNVVDQPLRFPDA 268
N TL NVV + L+FPD+
Sbjct: 649 NEETLANVVSESLKFPDS 596
Database: Populus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:49 PM
Number of letters in database: 203,408,664
Number of sequences in database: 369,679
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 271,916,723
Number of Sequences: 369679
Number of extensions: 3617187
Number of successful extensions: 49494
Number of sequences better than 1.0e-020: 42
length of database: 67,802,888
effective HSP length: 51
effective length of database: 48,949,259
effective search space used: 7685033663
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)