TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3829479.2.1
(1245 letters)
Database: Populus_nucl_with_EST.fasta
369,679 sequences; 203,408,664 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|DT510612.1|DT510612 WS02427.BR_A17 PTxD-ICC-N-A-14 Popul... 214 7e-058
gb|DT509633.1|DT509633 WS02424.BR_E10 PTxD-ICC-N-A-14 Popul... 214 7e-058
gb|DN501305.1|DN501305 UM83TF04.5pR Populus female catkins ... 218 7e-056
gb|BU882965.1|BU882965 UM84TE12 Populus flower cDNA library... 216 2e-055
gb|BU883614.1|BU883614 UM95TA01 Populus flower cDNA library... 211 6e-054
gb|BU882889.1|BU882889 UM83TF04 Populus flower cDNA library... 200 2e-050
gb|AF052570.1|AF052570 Populus balsamifera subsp. trichocar... 131 4e-046
gb|DN491294.1|DN491294 UM83TF04.3pR Populus female catkins ... 179 4e-046
gb|AF052571.1|AF052571 Populus balsamifera subsp. trichocar... 136 3e-045
gb|DT517651.1|DT517651 WS02434.B21_O16 PTxD-ICC-N-A-14 Popu... 166 2e-043
gb|BU896348.1|BU896348 X039D07 Populus wood cDNA library Po... 140 6e-041
gb|BU896825.1|BU896825 X046D07 Populus wood cDNA library Po... 138 6e-041
gb|CV245843.1|CV245843 WS0259.B21_I15 PT-MB-N-A-15 Populus ... 129 9e-041
gb|CA925124.1|CA925124 MTU7TL.P13.H01 Aspen leaf cDNA Libra... 135 1e-039
gb|CA924237.1|CA924237 MTU7CL.P3.D05 Aspen leaf cDNA Librar... 133 3e-039
gb|BU878009.1|BU878009 V042A05 Populus flower cDNA library ... 162 3e-039
gb|AF377868.1| Populus tremuloides MADS-box protein PTM5 mR... 135 4e-039
gb|CV231279.1|CV231279 WS0194.B21_A22 PT-DX-N-A-10 Populus ... 135 5e-039
gb|CV242362.1|CV242362 WS02514.B21.1_N17 PT-MB-N-A-15 Popul... 134 7e-039
gb|DT524337.1|DT524337 WS02042.C21.1_F18 PTxN-IB-N-A-11 Pop... 134 7e-039
gb|AI161962.1|AI161962 A010P29U Hybrid aspen plasmid librar... 134 7e-039
gb|CA924456.1|CA924456 MTU7CL.P5.H08 Aspen leaf cDNA Librar... 132 3e-038
gb|DT520688.1|DT520688 WS02448.B21_E04 PTxD-ICC-N-A-14 Popu... 145 2e-037
gb|DV466358.1|DV466358 MTUNUL1.P5.F01 NUL Populus fremontii... 109 1e-034
gb|AF034093.2| Populus tremuloides PTM1 mRNA, complete cds 104 1e-034
gb|DV466538.1|DV466538 MTUNUL1.P6.H12 NUL Populus fremontii... 109 1e-034
gb|BU872670.1|BU872670 Q045E11 Populus flower cDNA library ... 107 1e-033
gb|CV256507.1|CV256507 WS0244.B21_A19 PTxD-ICC-N-A-14 Popul... 133 2e-033
gb|DT521357.1|DT521357 WS02034.B21_B05 PTxN-IB-N-A-11 Popul... 107 2e-033
gb|BU868189.1|BU868189 M112C09 Populus flower cDNA library ... 109 5e-033
gb|AY615966.1| Populus balsamifera subsp. trichocarpa APETA... 102 8e-033
gb|AY515153.1| Populus deltoides APETALA-like protein AP1 m... 106 1e-032
gb|AY615964.1| Populus balsamifera subsp. trichocarpa APETA... 107 5e-032
gb|AY359607.1| Populus yunnanensis sex male AGAMOUS (AG2) g... 136 2e-031
gb|AY359609.1| Populus tomentosa sex female AGAMOUS (AG2) g... 136 2e-031
gb|AF034094.2| Populus tremuloides PTM2 mRNA, complete cds 104 4e-031
gb|BU871261.1|BU871261 Q028F06 Populus flower cDNA library ... 135 5e-031
gb|BU891075.1|BU891075 P045E12 Populus petioles cDNA librar... 135 5e-031
gb|BU875666.1|BU875666 V009G10 Populus flower cDNA library ... 135 6e-031
gb|BU876515.1|BU876515 V021F11 Populus flower cDNA library ... 134 9e-031
gb|CK098276.1|CK098276 A010P29.5pR Hybrid aspen plasmid lib... 134 9e-031
gb|DT472398.1|DT472398 WS01226.BR.1_F17 PT-GT-FL-A-3 Populu... 134 9e-031
gb|AY359611.1| Populus tomentosa sex male AGAMOUS (AG2) gen... 134 1e-030
gb|CN523813.1|CN523813 GQ015M05.T3_C05 GQ015 Populus tricho... 105 2e-030
gb|CN524016.1|CN524016 GQ015M03.T3_C05 GQ015 Populus tricho... 105 2e-030
gb|AY359612.1| Populus tomentosa sex male AGAMOUS (AG1) gen... 133 2e-030
gb|AY359608.1| Populus yunnanensis sex male AGAMOUS (AG1) g... 132 6e-030
gb|AY359610.1| Populus tomentosa sex female AGAMOUS (AG1) g... 132 6e-030
gb|AY501392.1| Populus tomentosa MADS box transcription fac... 106 7e-030
gb|BU834392.1|BU834392 T060E09 Populus apical shoot cDNA li... 106 2e-029
gb|BU837680.1|BU837680 T104E08 Populus apical shoot cDNA li... 105 4e-029
gb|AY615965.1| Populus balsamifera subsp. trichocarpa APETA... 105 5e-029
gb|BU828831.1|BU828831 K029P51P Populus apical shoot cDNA l... 127 1e-028
gb|CV237019.1|CV237019 WS01226.B21.1_F17 PT-GT-FL-A-3 Popul... 99 3e-028
gb|AJ776745.1|AJ776745 AJ776745 Populus euphratica root 3-6... 123 2e-027
gb|DN484014.1|DN484014 PSO205E04 Populus tomentiglandulosa ... 121 1e-026
gb|DT515243.1|DT515243 WS02427.B21_A17 PTxD-ICC-N-A-14 Popu... 106 1e-025
gb|BI137078.1|BI137078 F079P74Y Populus flower cDNA library... 82 2e-025
gb|BI136216.1|BI136216 F065P15Y Populus flower cDNA library... 82 2e-025
gb|BI137178.1|BI137178 F081P53Y Populus flower cDNA library... 82 2e-025
gb|BU869954.1|BU869954 Q006E04 Populus flower cDNA library ... 116 4e-025
gb|BU875452.1|BU875452 V007C11 Populus flower cDNA library ... 115 5e-025
gb|BU883349.1|BU883349 UM89TD10 Populus flower cDNA library... 115 5e-025
gb|CK109990.1|CK109990 N051E04 Populus bark cDNA library Po... 115 5e-025
gb|DT489131.1|DT489131 WS02538.B21_G02 PT-MB-N-A-15 Populus... 115 5e-025
gb|AF185574.2| Populus tremuloides transcription factor MAG... 115 5e-025
gb|BU876142.1|BU876142 V016F11 Populus flower cDNA library ... 115 7e-025
gb|DT493519.1|DT493519 WS0111.BR_J17 PT-P-FL-A-2 Populus tr... 114 1e-024
gb|CX168497.1|CX168497 E12_69-75_10.ab1 leaf inoculated wit... 109 1e-024
gb|BU869391.1|BU869391 M129E09 Populus flower cDNA library ... 113 2e-024
gb|BU892010.1|BU892010 P058B10 Populus petioles cDNA librar... 113 2e-024
gb|DT510135.1|DT510135 WS02425.BR_L05 PTxD-ICC-N-A-14 Popul... 107 2e-024
gb|BI137201.1|BI137201 F082P13Y Populus flower cDNA library... 79 2e-024
gb|DT511195.1|DT511195 WS02429.BR_M24 PTxD-ICC-N-A-14 Popul... 113 3e-024
gb|DN500995.1|DN500995 UM45TD08.5pR Populus female catkins ... 112 5e-024
gb|AY235222.1| Populus tremuloides SEP3-related MADS-box pr... 112 5e-024
gb|BU897836.1|BU897836 X070E03 Populus wood cDNA library Po... 111 1e-023
gb|BU876286.1|BU876286 V018G10 Populus flower cDNA library ... 110 2e-023
gb|BU895896.1|BU895896 X032F06 Populus wood cDNA library Po... 110 2e-023
gb|AJ780611.1|AJ780611 AJ780611 Populus euphratica leaf 3-6... 109 3e-023
gb|DN494603.1|DN494603 M112C09.5pR Populus female catkins c... 109 3e-023
gb|DT499735.1|DT499735 WS9991.BR_D06 PT-P-FL-A-2 Populus tr... 109 3e-023
gb|CV244620.1|CV244620 WS0255.B21_C14 PT-MB-N-A-15 Populus ... 109 5e-023
gb|CX172311.1|CX172311 A03_69-28_01.ab1 leaf inoculated wit... 109 5e-023
gb|DT519845.1|DT519845 WS02443.B21_N10 PTxD-ICC-N-A-14 Popu... 109 5e-023
gb|DT514757.1|DT514757 WS02425.B21_L05 PTxD-ICC-N-A-14 Popu... 103 5e-023
gb|BU871887.1|BU871887 Q035F11 Populus flower cDNA library ... 108 6e-023
gb|CK096310.1|CK096310 UB10CPE08.3pR Populus active cambium... 108 6e-023
gb|CK106139.1|CK106139 UB10CPE08.5pR Populus active cambium... 108 6e-023
gb|BI136301.1|BI136301 F066P33Y Populus flower cDNA library... 73 6e-023
gb|DV463676.1|DV463676 MTUNUL1.P19.A07 NUL Populus fremonti... 108 9e-023
gb|DT520386.1|DT520386 WS02447.B21_G16 PTxD-ICC-N-A-14 Popu... 74 1e-022
gb|BU821074.1|BU821074 UB18CPG04 Populus tremula cambium cD... 107 1e-022
gb|CK106370.1|CK106370 UB18CPG04.5pR Populus active cambium... 107 1e-022
gb|CV242364.1|CV242364 WS02514.B21.1_N19 PT-MB-N-A-15 Popul... 107 1e-022
gb|AJ768302.1|AJ768302 AJ768302 Populus euphratica leaf adu... 106 2e-022
gb|CX171462.1|CX171462 A11_69-81_01.ab1 leaf inoculated wit... 106 2e-022
gb|DT524867.1|DT524867 WS02043.C21_M22 PTxN-IB-N-A-11 Popul... 106 2e-022
gb|AI164140.1|AI164140 A055P40U Hybrid aspen plasmid librar... 106 3e-022
gb|BU815739.1|BU815739 N045H05 Populus bark cDNA library Po... 106 3e-022
gb|BU835875.1|BU835875 T079G04 Populus apical shoot cDNA li... 106 3e-022
gb|CB240437.1|CB240437 PopSC00421 Poplar SC cDNA library Po... 106 3e-022
gb|CF227868.1|CF227868 PtaXM0005F8F0812 Poplar cDNA library... 106 3e-022
gb|CV247277.1|CV247277 WS01117.B21_K02 PT-P-FL-A-2 Populus ... 106 3e-022
gb|CX176973.1|CX176973 F04_69-92_12.ab1 leaf inoculated wit... 106 3e-022
gb|DT494170.1|DT494170 WS01117.BR_K02 PT-P-FL-A-2 Populus t... 106 3e-022
gb|CV262641.1|CV262641 WS0202.B21_B22 PTxN-IB-N-A-11 Populu... 68 4e-022
gb|BU821304.1|BU821304 UB21CPF03 Populus tremula cambium cD... 105 4e-022
gb|BU825245.1|BU825245 UK105TE02 Populus apical shoot cDNA ... 105 4e-022
gb|AJ768565.1|AJ768565 AJ768565 Populus euphratica leaf adu... 105 4e-022
gb|CX175553.1|CX175553 G09_69-34_13.ab1 leaf inoculated wit... 105 6e-022
gb|CV242967.1|CV242967 WS02516.B21.1_I15 PT-MB-N-A-15 Popul... 105 8e-022
gb|DT488786.1|DT488786 WS02537.B21_G19 PT-MB-N-A-15 Populus... 105 8e-022
gb|DT508225.1|DT508225 WS02420.BR_G10 PTxD-ICC-N-A-14 Popul... 105 8e-022
gb|DN484153.1|DN484153 PTRI27.5pR Populus cDNA, trichocarpa... 85 1e-021
gb|CV131878.1|CV131878 L4P01g05 Populus stem seasonal libra... 104 1e-021
gb|CX170459.1|CX170459 F04_69-82_12.ab1 leaf inoculated wit... 104 1e-021
gb|CX169762.1|CX169762 F05_69-66_11.ab1 leaf inoculated wit... 104 2e-021
gb|CF936743.1|CF936743 PO3009G02 Populus tomentiglandulosa ... 103 2e-021
gb|CF937087.1|CF937087 PO3015A10 Populus tomentiglandulosa ... 103 2e-021
gb|DV462933.1|DV462933 MTUNUL1.P1.E12 NUL Populus fremontii... 103 2e-021
gb|DV466432.1|DV466432 MTUNUL1.P50.E11 NUL Populus fremonti... 103 2e-021
gb|BI136881.1|BI136881 F075P93Y Populus flower cDNA library... 67 3e-021
gb|CV245807.1|CV245807 WS0259.B21_G24 PT-MB-N-A-15 Populus ... 103 3e-021
gb|BU824503.1|BU824503 UB65DPB03 Populus tremula cambium cD... 102 5e-021
gb|BI138350.1|BI138350 F104P08Y Populus flower cDNA library... 101 7e-021
gb|BU835141.1|BU835141 T070B04 Populus apical shoot cDNA li... 101 7e-021
>gb|DT510612.1|DT510612 WS02427.BR_A17 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02427_A17 5', mRNA sequence
Length = 920
Score = 214 bits (462), Expect(2) = 7e-058
Identities = 86/107 (80%), Positives = 101/107 (94%)
Frame = -2 / +3
Query: 998 GRGKIEIKRIENTTSRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLYEYANNS 819
GRGKIEIKRIENTT+RQVTFCKRRNGLLKKAYELSVLCDAEV+L+VFSSRGRLYEYANN+
Sbjct: 72 GRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVSLIVFSSRGRLYEYANNN 251
Query: 818 VKSTIERYKKANSDSSNSGTVAEVNAQYYQQESSKLRQMIHSLQNAN 678
++STI+RYKK +SDSSN+ ++ E+NAQYYQQES+K+RQ I LQN+N
Sbjct: 252 IRSTIDRYKKVSSDSSNTASITEINAQYYQQESAKMRQQIQLLQNSN 392
Score = 94.1 bits (199), Expect(2) = 1e-029
Identities = 50/96 (52%), Positives = 53/96 (55%)
Frame = +1 / -2
Query: 685 FCKLWIICRSLEDSCW*YWALTSATVPELEESLLAFLYLSMVDFTLLLAYS*RRPRLEKX 864
FC I R DSC *YWAL S E S L FLYLS+VD LLLAYS*RRPRLEK
Sbjct: 385 FCSN*IC*RIFADSC**YWALISVIEAVFELSELTFLYLSIVDLILLLAYS*RRPRLEKT 206
Query: 865 XXXXXXXXXXXXXYAFLSRPLRRLQKVTCRLVVFSM 972
AF + P LQKVT R VVFS+
Sbjct: 205 MRETSASQRTDNS*AFFNSPFLLLQKVT*RFVVFSI 98
Score = 57.0 bits (118), Expect(2) = 1e-029
Identities = 33/66 (50%), Positives = 38/66 (57%)
Frame = +1 / -2
Query: 481 SAILLLRYMLSVCRSISLFCI*STSAYSSSFFLALILIMAFSSLPSICLRSLRPMVWMES 660
SAIL+ R LS SISLFCI S SA S+S F LIL+M SSL S C S + S
Sbjct: 586 SAILVRR*ALSFSSSISLFCIYSISASSNSCFFDLILVMPLSSLFSSCFSSFTDRLLTAS 407
Query: 661 PTMFLV 678
P L+
Sbjct: 406 PIKCLL 389
Score = 30.9 bits (61), Expect(2) = 7e-058
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -3 / +1
Query: 625 NKWRASWRKP*SRLELERMSCYTLKLTICKKGR 527
+ WR ++ * M+C LKL+IC+KGR
Sbjct: 442 SSWRIGSKEA*LESGQRSMNCC*LKLSICRKGR 540
>gb|DT509633.1|DT509633 WS02424.BR_E10 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02424_E10 5', mRNA sequence
Length = 905
Score = 214 bits (462), Expect(2) = 7e-058
Identities = 86/107 (80%), Positives = 101/107 (94%)
Frame = -2 / +2
Query: 998 GRGKIEIKRIENTTSRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLYEYANNS 819
GRGKIEIKRIENTT+RQVTFCKRRNGLLKKAYELSVLCDAEV+L+VFSSRGRLYEYANN+
Sbjct: 68 GRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVSLIVFSSRGRLYEYANNN 247
Query: 818 VKSTIERYKKANSDSSNSGTVAEVNAQYYQQESSKLRQMIHSLQNAN 678
++STI+RYKK +SDSSN+ ++ E+NAQYYQQES+K+RQ I LQN+N
Sbjct: 248 IRSTIDRYKKVSSDSSNTASITEINAQYYQQESAKMRQQIQLLQNSN 388
Score = 94.1 bits (199), Expect(2) = 1e-029
Identities = 50/96 (52%), Positives = 53/96 (55%)
Frame = +1 / -3
Query: 685 FCKLWIICRSLEDSCW*YWALTSATVPELEESLLAFLYLSMVDFTLLLAYS*RRPRLEKX 864
FC I R DSC *YWAL S E S L FLYLS+VD LLLAYS*RRPRLEK
Sbjct: 381 FCSN*IC*RIFADSC**YWALISVIEAVFELSELTFLYLSIVDLILLLAYS*RRPRLEKT 202
Query: 865 XXXXXXXXXXXXXYAFLSRPLRRLQKVTCRLVVFSM 972
AF + P LQKVT R VVFS+
Sbjct: 201 MRETSASQRTDNS*AFFNSPFLLLQKVT*RFVVFSI 94
Score = 57.0 bits (118), Expect(2) = 1e-029
Identities = 33/66 (50%), Positives = 38/66 (57%)
Frame = +1 / -3
Query: 481 SAILLLRYMLSVCRSISLFCI*STSAYSSSFFLALILIMAFSSLPSICLRSLRPMVWMES 660
SAIL+ R LS SISLFCI S SA S+S F LIL+M SSL S C S + S
Sbjct: 582 SAILVRR*ALSFSSSISLFCIYSISASSNSCFFDLILVMPLSSLFSSCFSSFTDRLLTAS 403
Query: 661 PTMFLV 678
P L+
Sbjct: 402 PIKCLL 385
Score = 30.9 bits (61), Expect(2) = 7e-058
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -3 / +3
Query: 625 NKWRASWRKP*SRLELERMSCYTLKLTICKKGR 527
+ WR ++ * M+C LKL+IC+KGR
Sbjct: 438 SSWRIGSKEA*LESGQRSMNCC*LKLSICRKGR 536
>gb|DN501305.1|DN501305 UM83TF04.5pR Populus female catkins cDNA library Populus
trichocarpa cDNA clone UM83TF04 5', mRNA sequence
Length = 860
Score = 218 bits (470), Expect = 7e-056
Identities = 95/182 (52%), Positives = 132/182 (72%)
Frame = -2 / +2
Query: 998 GRGKIEIKRIENTTSRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLYEYANNS 819
GRGKIEIKRIENTT+RQVTFCKRRNGLLKKAYELSVLCDAEVAL+VFSSRGRLYEYANN+
Sbjct: 92 GRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNN 271
Query: 818 VKSTIERYKKANSDSSNSGTVAEVNAQYYQQESSKLRQMIHSLQNANTRNIVGDSIHTMG 639
+ K S S++ + Y Q+ S + + + R+++GD++ +
Sbjct: 272 SIRSTIDRYKKASSDSSNASSITEINAQYYQQESAKLRQQIQMLQNSNRHLMGDAVSNLS 451
Query: 638 LRDLKQMEGKLEKAIIKIRARKNELLYAEVDYMQKREMDLQTDNMYLRSKIAESNETGQP 459
+++LKQ+E +LE+ I +IR++K+ELL AE++Y+QKRE++L+ +++ LR+KIAE Q
Sbjct: 452 VKELKQLENRLERGITRIRSKKHELLLAEIEYLQKREIELENESVCLRTKIAEVERLQQA 631
Query: 458 AM 453
M
Sbjct: 632 NM 637
Score = 91.3 bits (193), Expect(3) = 4e-025
Identities = 35/50 (70%), Positives = 45/50 (90%)
Frame = -2 / +2
Query: 827 NNSVKSTIERYKKANSDSSNSGTVAEVNAQYYQQESSKLRQMIHSLQNAN 678
NNS++STI+RYKKA+SDSSN+ ++ E+NAQYYQQES+KLRQ I LQN+N
Sbjct: 266 NNSIRSTIDRYKKASSDSSNASSITEINAQYYQQESAKLRQQIQMLQNSN 415
Score = 64.8 bits (135), Expect(3) = 9e-033
Identities = 30/48 (62%), Positives = 31/48 (64%)
Frame = +1 / -3
Query: 685 FCKLWIICRSLEDSCW*YWALTSATVPELEESLLAFLYLSMVDFTLLL 828
FC + I CRS DSC *YWAL S E S LAFLYLSMVD LLL
Sbjct: 408 FCSI*ICCRSFADSC**YWALISVIEDAFELSELAFLYLSMVDLMLLL 265
Score = 59.7 bits (124), Expect(3) = 9e-033
Identities = 34/66 (51%), Positives = 39/66 (59%)
Frame = +1 / -3
Query: 481 SAILLLRYMLSVCRSISLFCI*STSAYSSSFFLALILIMAFSSLPSICLRSLRPMVWMES 660
SAIL+LR LS SISLFC S SA S+S F LIL+M SSL S CL S + S
Sbjct: 609 SAILVLRQTLSFSSSISLFCKYSISASSNSCFFDLILVMPLSSLFSSCLSSFTDKLLTAS 430
Query: 661 PTMFLV 678
P L+
Sbjct: 429 PIKCLL 412
Score = 54.7 bits (113), Expect(3) = 9e-033
Identities = 28/51 (54%), Positives = 29/51 (56%)
Frame = +1 / -3
Query: 820 LLLAYS*RRPRLEKXXXXXXXXXXXXXXYAFLSRPLRRLQKVTCRLVVFSM 972
LLLAYS*RRPRLEK AF P LQKVT RLVVFS+
Sbjct: 270 LLLAYS*RRPRLEKTMRATSASHRTDNS*AFFKSPFLLLQKVT*RLVVFSI 118
Score = 31.8 bits (63), Expect(3) = 4e-025
Identities = 16/47 (34%), Positives = 22/47 (46%)
Frame = -3 / +3
Query: 628 LNKWRASWRKP*SRLELERMSCYTLKLTICKKGRWICRLTTCT*GAR 488
L+ WR R+ MSC LKL+ C+KGR ++ G R
Sbjct: 462 LSSWRIGLREALLESGQRSMSCC*LKLSTCRKGRLSWKMKVFVLGPR 602
Score = 29.9 bits (59), Expect(3) = 4e-025
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = -1 / +1
Query: 996 ERQDRDQAHREHDEPAGDLLQAPQRPAQE 910
+R+DRDQ REH + +G LQ + +E
Sbjct: 94 KRKDRDQEDREHHQSSGYFLQEEKWALEE 180
>gb|BU882965.1|BU882965 UM84TE12 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 562
Score = 216 bits (466), Expect = 2e-055
Identities = 91/117 (77%), Positives = 105/117 (89%)
Frame = -2 / +1
Query: 1028 PTGSGDRQGQGRGKIEIKRIENTTSRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSR 849
P S + GRGK+EIKRIENTT+RQVTFCKRRNGLLKKAYELSVLCDAEVAL+VFSSR
Sbjct: 169 PQESSPLRKLGRGKVEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSR 348
Query: 848 GRLYEYANNSVKSTIERYKKANSDSSNSGTVAEVNAQYYQQESSKLRQMIHSLQNAN 678
GRLYEY+NNSVKSTIERYKKA +DSSN+G+V+E NAQ+YQQE++KLR I +LQN+N
Sbjct: 349 GRLYEYSNNSVKSTIERYKKACADSSNNGSVSEANAQFYQQEAAKLRSQIGNLQNSN 519
Score = 116 bits (249), Expect = 2e-025
Identities = 61/100 (61%), Positives = 65/100 (65%)
Frame = +1 / -3
Query: 676 VFAFCKLWIICRSLEDSCW*YWALTSATVPELEESLLAFLYLSMVDFTLLLAYS*RRPRL 855
+F FCKL I RSL SC * AL S T P LEES AFLYLS+VD TLLL YS*RRPRL
Sbjct: 521 LFEFCKLPICERSLAASC**N*ALASETDPLLEESAHAFLYLSIVDLTLLLEYS*RRPRL 342
Query: 856 EKXXXXXXXXXXXXXXYAFLSRPLRRLQKVTCRLVVFSMR 975
EK AFLS+P R LQKVT RLVVFS+R
Sbjct: 341 EKTMSATSASQRTDNS*AFLSKPFRLLQKVTWRLVVFSIR 222
>gb|BU883614.1|BU883614 UM95TA01 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 613
Score = 211 bits (456), Expect = 6e-054
Identities = 87/107 (81%), Positives = 102/107 (95%)
Frame = -2 / +3
Query: 998 GRGKIEIKRIENTTSRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLYEYANNS 819
GRGK+EIKRIENTT+RQVTFCKRR+GLLKKAYELSVLCDAEVAL+VFSSRGRLYEY+N+S
Sbjct: 276 GRGKVEIKRIENTTNRQVTFCKRRSGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNDS 455
Query: 818 VKSTIERYKKANSDSSNSGTVAEVNAQYYQQESSKLRQMIHSLQNAN 678
VKSTIERYKKA++DSSN+G+V+E NAQYYQQE++KLR I +LQ +N
Sbjct: 456 VKSTIERYKKASADSSNTGSVSEANAQYYQQEAAKLRSQIGNLQKSN 596
Score = 123 bits (264), Expect = 2e-027
Identities = 62/100 (62%), Positives = 66/100 (66%)
Frame = +1 / -1
Query: 676 VFAFCKLWIICRSLEDSCW*YWALTSATVPELEESLLAFLYLSMVDFTLLLAYS*RRPRL 855
+F FCKL I RSL SCW*Y AL S T P EES AFLYLS+VD TL L YS*RRPRL
Sbjct: 598 LFDFCKLPIWERSLAASCW*Y*ALASETDPVFEESADAFLYLSIVDLTLSLEYS*RRPRL 419
Query: 856 EKXXXXXXXXXXXXXXYAFLSRPLRRLQKVTCRLVVFSMR 975
EK AFLS+PLR LQKVT RLVVFS+R
Sbjct: 418 EKTMSATSASQRTDNS*AFLSKPLRLLQKVTWRLVVFSIR 299
>gb|BU882889.1|BU882889 UM83TF04 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 588
Score = 200 bits (431), Expect = 2e-050
Identities = 86/160 (53%), Positives = 118/160 (73%)
Frame = -2 / +3
Query: 998 GRGKIEIKRIENTTSRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLYEYANNS 819
GRGKIEIKRIENTT+RQVTFCKRRNGLLKKAYELSVLCDAEVAL+VFSSRGRLYEYANN+
Sbjct: 108 GRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNN 287
Query: 818 VKSTIERYKKANSDSSNSGTVAEVNAQYYQQESSKLRQMIHSLQNANTRNIVGDSIHTMG 639
+ K S S++ + Y Q+ S + + + R+++GD++ +
Sbjct: 288 SIRSTIDRYKKASSDSSNASSITEINAQYYQQESAKLRQQIQMLQNSNRHLMGDAVSNLS 467
Query: 638 LRDLKQMEGKLEKAIIKIRARKNELLYAEVDYMQKREMDL 519
+++LKQ+E +LE+ I +IR++K+E L AE++Y+QKRE++L
Sbjct: 468 VKELKQLENRLERGITRIRSKKHEXLLAEIEYLQKREIEL 587
Score = 91.3 bits (193), Expect(3) = 2e-023
Identities = 35/50 (70%), Positives = 45/50 (90%)
Frame = -2 / +3
Query: 827 NNSVKSTIERYKKANSDSSNSGTVAEVNAQYYQQESSKLRQMIHSLQNAN 678
NNS++STI+RYKKA+SDSSN+ ++ E+NAQYYQQES+KLRQ I LQN+N
Sbjct: 282 NNSIRSTIDRYKKASSDSSNASSITEINAQYYQQESAKLRQQIQMLQNSN 431
Score = 64.8 bits (135), Expect(3) = 1e-028
Identities = 30/48 (62%), Positives = 31/48 (64%)
Frame = +1 / -3
Query: 685 FCKLWIICRSLEDSCW*YWALTSATVPELEESLLAFLYLSMVDFTLLL 828
FC + I CRS DSC *YWAL S E S LAFLYLSMVD LLL
Sbjct: 424 FCSI*ICCRSFADSC**YWALISVIEDAFELSELAFLYLSMVDLMLLL 281
Score = 54.7 bits (113), Expect(3) = 1e-028
Identities = 28/51 (54%), Positives = 29/51 (56%)
Frame = +1 / -3
Query: 820 LLLAYS*RRPRLEKXXXXXXXXXXXXXXYAFLSRPLRRLQKVTCRLVVFSM 972
LLLAYS*RRPRLEK AF P LQKVT RLVVFS+
Sbjct: 286 LLLAYS*RRPRLEKTMRATSASHRTDNS*AFFKSPFLLLQKVT*RLVVFSI 134
Score = 46.0 bits (94), Expect(3) = 1e-028
Identities = 26/52 (50%), Positives = 29/52 (55%)
Frame = +1 / -3
Query: 523 SISLFCI*STSAYSSSFFLALILIMAFSSLPSICLRSLRPMVWMESPTMFLV 678
SISLFC S SA S S F LIL+M SSL S CL S + SP L+
Sbjct: 583 SISLFCKYSISASSXSCFFDLILVMPLSSLFSSCLSSFTDKLLTASPIKCLL 428
Score = 29.9 bits (59), Expect(3) = 2e-023
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = -1 / +2
Query: 996 ERQDRDQAHREHDEPAGDLLQAPQRPAQE 910
+R+DRDQ REH + +G LQ + +E
Sbjct: 110 KRKDRDQEDREHHQSSGYFLQEEKWALEE 196
Score = 26.3 bits (51), Expect(3) = 2e-023
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = -3 / +1
Query: 628 LNKWRASWRKP*SRLELERMSCYTLKLTICKKGR 527
L+ WR R+ MS LKL+ C+KGR
Sbjct: 478 LSSWRIGLREALLESGQRSMSXC*LKLSTCRKGR 579
>gb|AF052570.1|AF052570 Populus balsamifera subsp. trichocarpa AGAMOUS homolog (PTAG1) gene,
complete cds
Length = 11485
Score = 131 bits (280), Expect(5) = 4e-046
Identities = 53/59 (89%), Positives = 59/59 (100%)
Frame = -2 / +1
Query: 998 GRGKIEIKRIENTTSRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLYEYANN 822
GRGK+EIKRIENTT+RQVTFCKRR+GLLKKAYELSVLCDAEVAL+VFSSRGRLYEY+N+
Sbjct: 3118 GRGKVEIKRIENTTNRQVTFCKRRSGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSND 3294
Score = 54.2 bits (112), Expect(5) = 4e-046
Identities = 22/28 (78%), Positives = 27/28 (96%)
Frame = -2 / +3
Query: 821 SVKSTIERYKKANSDSSNSGTVAEVNAQ 738
SVKSTIERYKKA++DSSN+G+V+E NAQ
Sbjct: 8160 SVKSTIERYKKASADSSNTGSVSEANAQ 8243
Score = 37.7 bits (76), Expect(5) = 4e-046
Identities = 14/22 (63%), Positives = 19/22 (86%)
Frame = -2 / +3
Query: 743 AQYYQQESSKLRQMIHSLQNAN 678
+QYYQQE++KLR I +LQN+N
Sbjct: 8889 SQYYQQEAAKLRSQIGNLQNSN 8954
Score = 33.6 bits (67), Expect(5) = 4e-046
Identities = 12/17 (70%), Positives = 16/17 (94%)
Frame = -2 / +3
Query: 575 KNELLYAEVDYMQKREM 525
+NELL+AE++YMQKR M
Sbjct: 9282 QNELLFAEIEYMQKRVM 9332
Score = 25.4 bits (49), Expect(5) = 4e-046
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -2 / +1
Query: 404 PFDSRNFLQVSMPQHYSH 351
P+DSRN+ QV+ Q SH
Sbjct: 9790 PYDSRNYSQVNGLQPASH 9843
>gb|DN491294.1|DN491294 UM83TF04.3pR Populus female catkins cDNA library Populus
trichocarpa cDNA clone UM83TF04 3', mRNA sequence
Length = 813
Score = 179 bits (385), Expect(2) = 4e-046
Identities = 78/164 (47%), Positives = 114/164 (69%)
Frame = -2 / -2
Query: 944 TFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLYEYANNSVKSTIERYKKANSDSSNS 765
TFCKRRNGLLKKAYELSVLCDAEVAL+VFSSRGRLYEYANN+ + K S S++
Sbjct: 701 TFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNNSIRSTIDRYKKASSDSSN 522
Query: 764 GTVAEVNAQYYQQESSKLRQMIHSLQNANTRNIVGDSIHTMGLRDLKQMEGKLEKAIIKI 585
+ Y Q+ S + + + R+++GD++ + +++LKQ+E +LE+ I +I
Sbjct: 521 ASSITEINAQYYQQESAKLRQQIQMLQNSNRHLMGDAVSNLSVKELKQLENRLERGITRI 342
Query: 584 RARKNELLYAEVDYMQKREMDLQTDNMYLRSKIAESNETGQPAM 453
R++K+ELL AE++Y+QKRE++L+ +++ LR+KIAE Q M
Sbjct: 341 RSKKHELLLAEIEYLQKREIELENESVCLRTKIAEVERLQQANM 210
Score = 91.3 bits (193), Expect(3) = 8e-029
Identities = 35/50 (70%), Positives = 45/50 (90%)
Frame = -2 / -2
Query: 827 NNSVKSTIERYKKANSDSSNSGTVAEVNAQYYQQESSKLRQMIHSLQNAN 678
NNS++STI+RYKKA+SDSSN+ ++ E+NAQYYQQES+KLRQ I LQN+N
Sbjct: 581 NNSIRSTIDRYKKASSDSSNASSITEINAQYYQQESAKLRQQIQMLQNSN 432
Score = 64.8 bits (135), Expect(3) = 8e-029
Identities = 30/48 (62%), Positives = 31/48 (64%)
Frame = +1 / +1
Query: 685 FCKLWIICRSLEDSCW*YWALTSATVPELEESLLAFLYLSMVDFTLLL 828
FC + I CRS DSC *YWAL S E S LAFLYLSMVD LLL
Sbjct: 439 FCSI*ICCRSFADSC**YWALISVIEDAFELSELAFLYLSMVDLMLLL 582
Score = 59.7 bits (124), Expect(3) = 8e-029
Identities = 34/66 (51%), Positives = 39/66 (59%)
Frame = +1 / +1
Query: 481 SAILLLRYMLSVCRSISLFCI*STSAYSSSFFLALILIMAFSSLPSICLRSLRPMVWMES 660
SAIL+LR LS SISLFC S SA S+S F LIL+M SSL S CL S + S
Sbjct: 238 SAILVLRQTLSFSSSISLFCKYSISASSNSCFFDLILVMPLSSLFSSCLSSFTDKLLTAS 417
Query: 661 PTMFLV 678
P L+
Sbjct: 418 PIKCLL 435
Score = 42.8 bits (87), Expect(3) = 8e-029
Identities = 19/30 (63%), Positives = 22/30 (73%)
Frame = -2 / -3
Query: 998 GRGKIEIKRIENTTSRQVTFCKRRNGLLKK 909
GRGKIEIKRIENTT+RQV + G +K
Sbjct: 754 GRGKIEIKRIENTTNRQVLSARGEMGS*RK 665
Score = 41.4 bits (84), Expect(3) = 8e-029
Identities = 21/42 (50%), Positives = 21/42 (50%)
Frame = +1 / +1
Query: 820 LLLAYS*RRPRLEKXXXXXXXXXXXXXXYAFLSRPLRRLQKV 945
LLLAYS*RRPRLEK AF P LQKV
Sbjct: 577 LLLAYS*RRPRLEKTMRATSASHRTDNS*AFFKSPFLLLQKV 702
Score = 31.8 bits (63), Expect(3) = 8e-029
Identities = 16/47 (34%), Positives = 22/47 (46%)
Frame = -3 / -3
Query: 628 LNKWRASWRKP*SRLELERMSCYTLKLTICKKGRWICRLTTCT*GAR 488
L+ WR R+ MSC LKL+ C+KGR ++ G R
Sbjct: 385 LSSWRIGLREALLESGQRSMSCC*LKLSTCRKGRLSWKMKVFVLGPR 245
Score = 26.7 bits (52), Expect(2) = 4e-046
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = -1 / -2
Query: 996 ERQDRDQAHREHDEPAG 946
+R+DRDQ REH + +G
Sbjct: 752 KRKDRDQEDREHHQSSG 702
>gb|AF052571.1|AF052571 Populus balsamifera subsp. trichocarpa AGAMOUS homolog (PTAG2) gene,
complete cds
Length = 10007
Score = 136 bits (292), Expect(4) = 3e-045
Identities = 57/69 (82%), Positives = 62/69 (89%)
Frame = -2 / +2
Query: 1028 PTGSGDRQGQGRGKIEIKRIENTTSRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSR 849
P S + GRGK+EIKRIENTT+RQVTFCKRRNGLLKKAYELSVLCDAEVAL+VFSSR
Sbjct: 2945 PQESSPLRKLGRGKVEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSR 3124
Query: 848 GRLYEYANN 822
GRLYEY+NN
Sbjct: 3125 GRLYEYSNN 3151
Score = 52.4 bits (108), Expect(4) = 3e-045
Identities = 22/28 (78%), Positives = 26/28 (92%)
Frame = -2 / +2
Query: 821 SVKSTIERYKKANSDSSNSGTVAEVNAQ 738
SVKSTIERYKKA +DSSN+G+V+E NAQ
Sbjct: 7034 SVKSTIERYKKACADSSNNGSVSEANAQ 7117
Score = 35.4 bits (71), Expect(4) = 3e-045
Identities = 13/21 (61%), Positives = 18/21 (85%)
Frame = -2 / +3
Query: 740 QYYQQESSKLRQMIHSLQNAN 678
Q+YQQE++KLR I +LQN+N
Sbjct: 7944 QFYQQEAAKLRSQIGNLQNSN 8006
Score = 32.2 bits (64), Expect(4) = 3e-045
Identities = 11/15 (73%), Positives = 15/15 (100%)
Frame = -2 / +1
Query: 575 KNELLYAEVDYMQKR 531
+NELL+AE++YMQKR
Sbjct: 8329 QNELLFAEIEYMQKR 8373
>gb|DT517651.1|DT517651 WS02434.B21_O16 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02434_O16 3', mRNA sequence
Length = 924
Score = 166 bits (357), Expect(2) = 2e-043
Identities = 66/86 (76%), Positives = 80/86 (93%)
Frame = -2 / -1
Query: 935 KRRNGLLKKAYELSVLCDAEVALVVFSSRGRLYEYANNSVKSTIERYKKANSDSSNSGTV 756
KRRNGLLKKAYELSVLCDAEV+L+VFSSRGRLYEYANN+++STI+RYKK +SDSSN+ ++
Sbjct: 924 KRRNGLLKKAYELSVLCDAEVSLIVFSSRGRLYEYANNNIRSTIDRYKKVSSDSSNTASI 745
Query: 755 AEVNAQYYQQESSKLRQMIHSLQNAN 678
E+NAQYYQQES+K+RQ I LQN+N
Sbjct: 744 TEINAQYYQQESAKMRQQIQLLQNSN 667
Score = 76.2 bits (160), Expect(2) = 8e-025
Identities = 40/80 (50%), Positives = 42/80 (52%)
Frame = +1 / +2
Query: 685 FCKLWIICRSLEDSCW*YWALTSATVPELEESLLAFLYLSMVDFTLLLAYS*RRPRLEKX 864
FC I R DSC *YWAL S E S L FLYLS+VD LLLAYS*RRPRLEK
Sbjct: 674 FCSN*IC*RIFADSC**YWALISVIEAVFELSELTFLYLSIVDLILLLAYS*RRPRLEKT 853
Query: 865 XXXXXXXXXXXXXYAFLSRP 924
AF + P
Sbjct: 854 MRETSASQRTDNS*AFFNSP 913
Score = 58.3 bits (121), Expect(2) = 8e-025
Identities = 33/66 (50%), Positives = 38/66 (57%)
Frame = +1 / +2
Query: 481 SAILLLRYMLSVCRSISLFCI*STSAYSSSFFLALILIMAFSSLPSICLRSLRPMVWMES 660
SAIL+ R LS SISLFCI S SA S+S F LIL+M SSL S C S + S
Sbjct: 473 SAILVRRQALSFSSSISLFCIYSISASSNSCFFDLILVMPLSSLFSSCFSSFTDRLLTAS 652
Query: 661 PTMFLV 678
P L+
Sbjct: 653 PIKCLL 670
Score = 30.9 bits (61), Expect(2) = 2e-043
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -3 / -2
Query: 625 NKWRASWRKP*SRLELERMSCYTLKLTICKKGR 527
+ WR ++ * M+C LKL+IC+KGR
Sbjct: 617 SSWRIGSKEA*LESGQRSMNCC*LKLSICRKGR 519
>gb|BU896348.1|BU896348 X039D07 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 739
Score = 140 bits (300), Expect(2) = 6e-041
Identities = 59/103 (57%), Positives = 80/103 (77%)
Frame = -2 / +3
Query: 995 RGKIEIKRIENTTSRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLYEYANNSV 816
RGK ++KRIEN TSRQVTF KRRNGLLKKA+ELSVLCDAEVAL++FS+RG+LYE++++S+
Sbjct: 210 RGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALILFSTRGKLYEFSSSSI 389
Query: 815 KSTIERYKKANSDSSNSGTVAEVNAQYYQQESSKLRQMIHSLQ 687
TIERY+K D SG + + N Q ++++ L + I L+
Sbjct: 390 NRTIERYQKRAKDVGISGKMVQDNIQPVKEDAFTLAKKIELLE 518
Score = 48.3 bits (99), Expect(2) = 6e-041
Identities = 18/55 (32%), Positives = 34/55 (61%)
Frame = -2 / +3
Query: 692 LQNANTRNIVGDSIHTMGLRDLKQMEGKLEKAIIKIRARKNELLYAEVDYMQKRE 528
L + R +G+ + T DL+Q+E +LE+++ +IRARKN+L ++ ++ E
Sbjct: 510 LLEVSKRKFLGEGLETCSTDDLQQLENQLERSLTRIRARKNQLFRERIEKLKGEE 674
>gb|BU896825.1|BU896825 X046D07 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 596
Score = 138 bits (297), Expect(2) = 6e-041
Identities = 59/103 (57%), Positives = 79/103 (76%)
Frame = -2 / +3
Query: 995 RGKIEIKRIENTTSRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLYEYANNSV 816
RGK ++KRIEN TSRQVTF KRRNGLLKKA+ELSVLCDAEVAL+VFS+RG+LYE++++S+
Sbjct: 90 RGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSTRGKLYEFSSSSI 269
Query: 815 KSTIERYKKANSDSSNSGTVAEVNAQYYQQESSKLRQMIHSLQ 687
TIERY+K D S + + N Q ++++ L + I L+
Sbjct: 270 NRTIERYQKRAKDVGISSKMVQDNIQPVKEDTFTLAKKIELLE 398
Score = 49.6 bits (102), Expect(2) = 6e-041
Identities = 21/66 (31%), Positives = 38/66 (57%)
Frame = -2 / +3
Query: 692 LQNANTRNIVGDSIHTMGLRDLKQMEGKLEKAIIKIRARKNELLYAEVDYMQKREMDLQT 513
L + R + + + T DL+Q+E +LE+++ +IRARKN+L ++ ++ E L
Sbjct: 390 LLEVSKRKFLREGLETCSTDDLQQLENQLERSLTRIRARKNQLFRERIEKLKGEEKILLE 569
Query: 512 DNMYLR 495
+N LR
Sbjct: 570 ENTRLR 587
>gb|CV245843.1|CV245843 WS0259.B21_I15 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS0259_I15 3', mRNA sequence
Length = 836
Score = 129 bits (276), Expect(2) = 9e-041
Identities = 55/99 (55%), Positives = 75/99 (75%)
Frame = -2 / -1
Query: 983 EIKRIENTTSRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLYEYANNSVKSTI 804
++KRIEN TSRQVTF KRRNGLLKKA+ELSVLCDAEVAL+VFS+RG+LYE++++S+ TI
Sbjct: 836 QMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSTRGKLYEFSSSSMNRTI 657
Query: 803 ERYKKANSDSSNSGTVAEVNAQYYQQESSKLRQMIHSLQ 687
E Y+K D S + + N Q ++++ L + I L+
Sbjct: 656 ESYQKRAKDVGTSSKMVKDNMQPVKEDAFTLAKKIELLE 540
Score = 58.8 bits (122), Expect(2) = 9e-041
Identities = 23/68 (33%), Positives = 42/68 (61%)
Frame = -2 / -1
Query: 692 LQNANTRNIVGDSIHTMGLRDLKQMEGKLEKAIIKIRARKNELLYAEVDYMQKREMDLQT 513
L + R ++GD + + DL+Q+E +LE+++ +IRARKN+L +++ ++ E L
Sbjct: 548 LLEVSKRKLLGDGLEPCSIDDLQQLENQLERSLTRIRARKNQLFREQIEKLKGEEKILME 369
Query: 512 DNMYLRSK 489
+N LR K
Sbjct: 368 ENTELREK 345
>gb|CA925124.1|CA925124 MTU7TL.P13.H01 Aspen leaf cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 702
Score = 135 bits (289), Expect(2) = 1e-039
Identities = 56/103 (54%), Positives = 80/103 (77%)
Frame = -2 / -1
Query: 995 RGKIEIKRIENTTSRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLYEYANNSV 816
RGK +++RIEN TSRQVTF KRRNGLLKKA+ELSVLCDAEVAL+VFS RG+LYE+A++S+
Sbjct: 672 RGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGKLYEFASSSM 493
Query: 815 KSTIERYKKANSDSSNSGTVAEVNAQYYQQESSKLRQMIHSLQ 687
+ TIERY++ +++ + E N ++E++ + + I L+
Sbjct: 492 QETIERYRRHVKENNTNKQPVEQNMLQLKEEAASMIKKIEHLE 364
Score = 48.7 bits (100), Expect(2) = 1e-039
Identities = 18/59 (30%), Positives = 40/59 (67%)
Frame = -2 / -1
Query: 674 RNIVGDSIHTMGLRDLKQMEGKLEKAIIKIRARKNELLYAEVDYMQKREMDLQTDNMYL 498
R ++G+ + + + +L+Q+E +LEK++ IRARKN++ +++ ++++E L +N L
Sbjct: 354 RKLLGECLGSCTIEELQQIEQQLEKSVSTIRARKNQVFKEQIELLKQKEKLLAAENARL 178
>gb|CA924237.1|CA924237 MTU7CL.P3.D05 Aspen leaf cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 623
Score = 133 bits (286), Expect(2) = 3e-039
Identities = 55/103 (53%), Positives = 79/103 (76%)
Frame = -2 / -3
Query: 995 RGKIEIKRIENTTSRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLYEYANNSV 816
RGK +++RIEN TSRQVTF KRRNGLLKKA+ELSVLCDAEVA++VFS RG+LYE+ ++SV
Sbjct: 510 RGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVAVIVFSPRGKLYEFGSSSV 331
Query: 815 KSTIERYKKANSDSSNSGTVAEVNAQYYQQESSKLRQMIHSLQ 687
+ TIERY++ + + + +E N + + E++ + + I L+
Sbjct: 330 QETIERYQRHVKEGNTNKQTSEQNVEQLKGEAASMIKKIEILE 202
Score = 49.2 bits (101), Expect(2) = 3e-039
Identities = 18/62 (29%), Positives = 42/62 (67%)
Frame = -2 / -3
Query: 674 RNIVGDSIHTMGLRDLKQMEGKLEKAIIKIRARKNELLYAEVDYMQKREMDLQTDNMYLR 495
R ++G+ + + + +L+Q+E +LE+++ IRARKN++ +++ ++++E L +N L
Sbjct: 192 RKLLGECLGSCTIEELQQIEQQLERSVSTIRARKNQVFRDQIEQLKQKEKLLTAENARLS 13
Query: 494 SK 489
+K
Sbjct: 12 NK 7
>gb|BU878009.1|BU878009 V042A05 Populus flower cDNA library Populus trichocarpa cDNA 5 prime,
mRNA sequence
Length = 278
Score = 162 bits (349), Expect = 3e-039
Identities = 69/81 (85%), Positives = 74/81 (91%)
Frame = -2 / +1
Query: 1028 PTGSGDRQGQGRGKIEIKRIENTTSRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSR 849
P S + GRGK+EIKRIENTT+RQVTFCKRRNGLLKKAYELSVLCDAEVAL+VFSSR
Sbjct: 28 PQESSPLRKLGRGKVEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSR 207
Query: 848 GRLYEYANNSVKSTIERYKKA 786
GRLYEY+NNSVKSTIERYKKA
Sbjct: 208 GRLYEYSNNSVKSTIERYKKA 270
>gb|AF377868.1| Populus tremuloides MADS-box protein PTM5 mRNA, complete cds
Length = 1196
Score = 135 bits (289), Expect(2) = 4e-039
Identities = 56/103 (54%), Positives = 80/103 (77%)
Frame = -2 / +3
Query: 995 RGKIEIKRIENTTSRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLYEYANNSV 816
RGK +++RIEN TSRQVTF KRRNGLLKKA+ELSVLCDAEVAL+VFS RG+LYE+A++S+
Sbjct: 306 RGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGKLYEFASSSM 485
Query: 815 KSTIERYKKANSDSSNSGTVAEVNAQYYQQESSKLRQMIHSLQ 687
+ TIERY++ +++ + E N ++E++ + + I L+
Sbjct: 486 QETIERYRRHVKENNTNKQPVEQNMLQLKEEAASMIKKIEHLE 614
Score = 47.3 bits (97), Expect(2) = 4e-039
Identities = 17/59 (28%), Positives = 40/59 (67%)
Frame = -2 / +3
Query: 674 RNIVGDSIHTMGLRDLKQMEGKLEKAIIKIRARKNELLYAEVDYMQKREMDLQTDNMYL 498
R ++G+ + + + +L+Q+E +LE+++ IRARKN++ +++ ++++E L +N L
Sbjct: 624 RKLLGECLGSCTIEELQQIEQQLERSVSTIRARKNQVFKEQIELLKQKEKLLAAENARL 800
>gb|CV231279.1|CV231279 WS0194.B21_A22 PT-DX-N-A-10 Populus trichocarpa cDNA clone
WS0194_A22 3', mRNA sequence
Length = 935
Score = 135 bits (289), Expect(2) = 5e-039
Identities = 56/103 (54%), Positives = 80/103 (77%)
Frame = -2 / -3
Query: 995 RGKIEIKRIENTTSRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLYEYANNSV 816
RGK +++RIEN TSRQVTF KRRNGLLKKA+ELSVLCDAEVAL+VFS RG+LYE+A++S+
Sbjct: 912 RGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGKLYEFASSSM 733
Query: 815 KSTIERYKKANSDSSNSGTVAEVNAQYYQQESSKLRQMIHSLQ 687
+ TIERY++ +++ + E N ++E++ + + I L+
Sbjct: 732 QETIERYRRHVKENNTNKQPVEQNMLQLKEEAASMIKKIEHLE 604
Score = 46.9 bits (96), Expect(2) = 5e-039
Identities = 17/59 (28%), Positives = 40/59 (67%)
Frame = -2 / -3
Query: 674 RNIVGDSIHTMGLRDLKQMEGKLEKAIIKIRARKNELLYAEVDYMQKREMDLQTDNMYL 498
R ++G+ + + + +L+Q+E +LE+++ IRARKN++ +++ ++++E L +N L
Sbjct: 594 RKLLGECLGSCTVEELQQIEQQLERSVSTIRARKNQVFKEQIELLRQKEKLLAAENARL 418
>gb|CV242362.1|CV242362 WS02514.B21.1_N17 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02514_N17 3', mRNA sequence
Length = 912
Score = 134 bits (288), Expect(2) = 7e-039
Identities = 56/103 (54%), Positives = 79/103 (76%)
Frame = -2 / -3
Query: 995 RGKIEIKRIENTTSRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLYEYANNSV 816
RGK +++RIEN TSRQVTF KRRNGLLKKA+ELSVLCDAEVAL+VFS RG+LYE+A+ S+
Sbjct: 901 RGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGKLYEFASTSM 722
Query: 815 KSTIERYKKANSDSSNSGTVAEVNAQYYQQESSKLRQMIHSLQ 687
+ TIERY++ +++ + E N ++E++ + + I L+
Sbjct: 721 QETIERYRRHVKENNTNKQPVEQNMLQLKEEAASMIKKIEHLE 593
Score = 46.9 bits (96), Expect(2) = 7e-039
Identities = 17/59 (28%), Positives = 40/59 (67%)
Frame = -2 / -3
Query: 674 RNIVGDSIHTMGLRDLKQMEGKLEKAIIKIRARKNELLYAEVDYMQKREMDLQTDNMYL 498
R ++G+ + + + +L+Q+E +LE+++ IRARKN++ +++ ++++E L +N L
Sbjct: 583 RKLLGECLGSCTVEELQQIEQQLERSVSTIRARKNQVFKEQIELLRQKEKLLAAENARL 407
>gb|DT524337.1|DT524337 WS02042.C21.1_F18 PTxN-IB-N-A-11 Populus trichocarpa x Populus
nigra cDNA clone WS02042_F18 3', mRNA sequence
Length = 884
Score = 134 bits (288), Expect(2) = 7e-039
Identities = 56/103 (54%), Positives = 79/103 (76%)
Frame = -2 / -1
Query: 995 RGKIEIKRIENTTSRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLYEYANNSV 816
RGK +++RIEN TSRQVTF KRRNGLLKKA+ELSVLCDAEVAL+VFS RG+LYE+A+ S+
Sbjct: 884 RGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGKLYEFASTSM 705
Query: 815 KSTIERYKKANSDSSNSGTVAEVNAQYYQQESSKLRQMIHSLQ 687
+ TIERY++ +++ + E N ++E++ + + I L+
Sbjct: 704 QETIERYRRHVKENNTNKQPVEQNMLQLKEEAASMIKKIEHLE 576
Score = 46.9 bits (96), Expect(2) = 7e-039
Identities = 17/59 (28%), Positives = 40/59 (67%)
Frame = -2 / -1
Query: 674 RNIVGDSIHTMGLRDLKQMEGKLEKAIIKIRARKNELLYAEVDYMQKREMDLQTDNMYL 498
R ++G+ + + + +L+Q+E +LE+++ IRARKN++ +++ ++++E L +N L
Sbjct: 566 RKLLGECLGSCTVEELQQIEQQLERSVSTIRARKNQVFKEQIELLRQKEKLLAAENARL 390
>gb|AI161962.1|AI161962 A010P29U Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA 5', mRNA sequence
Length = 548
Score = 134 bits (288), Expect(2) = 7e-039
Identities = 58/103 (56%), Positives = 79/103 (76%)
Frame = -2 / +3
Query: 995 RGKIEIKRIENTTSRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLYEYANNSV 816
RGK ++KRIEN TSRQVTF KRRNGLLKKA+ELSVLCDAEVAL+VFS+RG+LYE++++S+
Sbjct: 48 RGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSTRGKLYEFSSSSM 227
Query: 815 KSTIERYKKANSDSSNSGTVAEVNAQYYQQESSKLRQMIHSLQ 687
TIERY+K D S + + + Q ++++ L + I L+
Sbjct: 228 NRTIERYQKRAKDVGISSKMVKDSMQPVKEDAFTLAKKIDILE 356
Score = 46.9 bits (96), Expect(2) = 7e-039
Identities = 21/60 (35%), Positives = 35/60 (58%)
Frame = -2 / +3
Query: 674 RNIVGDSIHTMGLRDLKQMEGKLEKAIIKIRARKNELLYAEVDYMQKREMDLQTDNMYLR 495
R ++GD + + +L+Q+E LE+ +IRARKN+L +V+ ++ E L N LR
Sbjct: 366 RKLLGDGLEPCXIDELQQLENPLERX*PRIRARKNQLFSEQVEKLEGEEEILMGGNXELR 545
>gb|CA924456.1|CA924456 MTU7CL.P5.H08 Aspen leaf cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 693
Score = 132 bits (283), Expect(2) = 3e-038
Identities = 55/103 (53%), Positives = 79/103 (76%)
Frame = -2 / -1
Query: 995 RGKIEIKRIENTTSRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLYEYANNSV 816
RGK +++RIEN TSRQV F KRRNGLLKKA+ELSVLCDAEVAL+VFS RG+LYE+A++S+
Sbjct: 672 RGKTQMRRIENATSRQVPFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGKLYEFASSSM 493
Query: 815 KSTIERYKKANSDSSNSGTVAEVNAQYYQQESSKLRQMIHSLQ 687
+ TIERY++ +++ + E N ++E++ + + I L+
Sbjct: 492 QETIERYRRHVKENNTNKQPVEQNMLQLKEEAASMIKKIEHLE 364
Score = 46.9 bits (96), Expect(2) = 3e-038
Identities = 17/59 (28%), Positives = 40/59 (67%)
Frame = -2 / -1
Query: 674 RNIVGDSIHTMGLRDLKQMEGKLEKAIIKIRARKNELLYAEVDYMQKREMDLQTDNMYL 498
R ++G+ + + + +L+Q+E +LE+++ IRARKN++ +++ ++++E L +N L
Sbjct: 354 RKLLGECLGSCTVEELQQIEQQLERSVSTIRARKNQVFKEQIELLKQKEKLLAAENARL 178
>gb|DT520688.1|DT520688 WS02448.B21_E04 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02448_E04 3', mRNA sequence
Length = 897
Score = 145 bits (312), Expect(2) = 2e-037
Identities = 57/77 (74%), Positives = 71/77 (92%)
Frame = -2 / -3
Query: 908 AYELSVLCDAEVALVVFSSRGRLYEYANNSVKSTIERYKKANSDSSNSGTVAEVNAQYYQ 729
AYELSVLCDAEV+L+VFSSRGRLYEYANN+++STI+RYKK +SDSSN+ ++ E+NAQYYQ
Sbjct: 895 AYELSVLCDAEVSLIVFSSRGRLYEYANNNIRSTIDRYKKVSSDSSNTASITEINAQYYQ 716
Query: 728 QESSKLRQMIHSLQNAN 678
QES+K+RQ I LQN+N
Sbjct: 715 QESAKMRQQIQLLQNSN 665
Score = 73.5 bits (154), Expect(2) = 1e-023
Identities = 37/59 (62%), Positives = 38/59 (64%)
Frame = +1 / +3
Query: 685 FCKLWIICRSLEDSCW*YWALTSATVPELEESLLAFLYLSMVDFTLLLAYS*RRPRLEK 861
FC I R DSC *YWAL S E S L FLYLS+VD LLLAYS*RRPRLEK
Sbjct: 672 FCSN*IC*RIFADSC**YWALISVIEAVFELSELTFLYLSIVDLILLLAYS*RRPRLEK 848
Score = 57.0 bits (118), Expect(2) = 1e-023
Identities = 33/66 (50%), Positives = 38/66 (57%)
Frame = +1 / +3
Query: 481 SAILLLRYMLSVCRSISLFCI*STSAYSSSFFLALILIMAFSSLPSICLRSLRPMVWMES 660
SAIL+ R LS SISLFCI S SA S+S F LIL+M SSL S C S + S
Sbjct: 471 SAILVRR*ALSFSSSISLFCIYSISASSNSCFFDLILVMPLSSLFSSCFSSFTDRLLTAS 650
Query: 661 PTMFLV 678
P L+
Sbjct: 651 PIKCLL 668
Score = 30.9 bits (61), Expect(2) = 2e-037
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -3 / -1
Query: 625 NKWRASWRKP*SRLELERMSCYTLKLTICKKGR 527
+ WR ++ * M+C LKL+IC+KGR
Sbjct: 615 SSWRIGSKEA*LESGQRSMNCC*LKLSICRKGR 517
>gb|DV466358.1|DV466358 MTUNUL1.P5.F01 NUL Populus fremontii x Populus angustifolia cDNA,
mRNA sequence
Length = 723
Score = 109 bits (233), Expect(2) = 1e-034
Identities = 44/65 (67%), Positives = 57/65 (87%)
Frame = -2 / +2
Query: 998 GRGKIEIKRIENTTSRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLYEYANNS 819
GRG+I++KRIEN +RQVTF KRR+GLLKKA+E+SVLCDAEVAL+VFS++G+L+EYA +S
Sbjct: 161 GRGRIQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYATDS 340
Query: 818 VKSTI 804
I
Sbjct: 341 CMERI 355
Score = 61.1 bits (127), Expect(2) = 1e-034
Identities = 20/70 (28%), Positives = 45/70 (64%)
Frame = -2 / +2
Query: 680 NTRNIVGDSIHTMGLRDLKQMEGKLEKAIIKIRARKNELLYAEVDYMQKREMDLQTDNMY 501
N R+ +G+ + ++ +++L+ +E +++ A+ +R+RKN+L+Y + +QK++ LQ N
Sbjct: 482 NQRHFMGEDLDSLNIKELQNLEHQIDSALKHVRSRKNQLMYESISELQKKDKALQEQNNM 661
Query: 500 LRSKIAESNE 471
L K+ E +
Sbjct: 662 LAKKVKEKEK 691
>gb|AF034093.2| Populus tremuloides PTM1 mRNA, complete cds
Length = 994
Score = 104 bits (222), Expect(2) = 1e-034
Identities = 41/65 (63%), Positives = 54/65 (83%)
Frame = -2 / +2
Query: 998 GRGKIEIKRIENTTSRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLYEYANNS 819
GRG++++KRIEN +RQVTF KRR GLLKKA+E+SVLCDAEVAL+VFS +G+L+EY+ +
Sbjct: 23 GRGRVQLKRIENKINRQVTFSKRRTGLLKKAHEISVLCDAEVALIVFSHKGKLFEYSTDD 202
Query: 818 VKSTI 804
I
Sbjct: 203 CMEEI 217
Score = 62.9 bits (131), Expect(2) = 1e-034
Identities = 27/74 (36%), Positives = 44/74 (59%)
Frame = -2 / +2
Query: 692 LQNANTRNIVGDSIHTMGLRDLKQMEGKLEKAIIKIRARKNELLYAEVDYMQKREMDLQT 513
L N RN VG+ + +M L++L+ +E ++E A+ IRARKN L+ + MQ++E +Q
Sbjct: 329 LLQRNHRNYVGEDLDSMSLKELQNLEQQIETALKHIRARKNHLMSQSISEMQRKEKAIQV 508
Query: 512 DNMYLRSKIAESNE 471
N L +I E +
Sbjct: 509 QNNMLVKQIKEKEK 550
>gb|DV466538.1|DV466538 MTUNUL1.P6.H12 NUL Populus fremontii x Populus angustifolia cDNA,
mRNA sequence
Length = 684
Score = 109 bits (233), Expect(2) = 1e-034
Identities = 44/65 (67%), Positives = 57/65 (87%)
Frame = -2 / +2
Query: 998 GRGKIEIKRIENTTSRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLYEYANNS 819
GRG+I++KRIEN +RQVTF KRR+GLLKKA+E+SVLCDAEVAL+VFS++G+L+EYA +S
Sbjct: 158 GRGRIQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYATDS 337
Query: 818 VKSTI 804
I
Sbjct: 338 CMERI 352
Score = 60.6 bits (126), Expect(2) = 1e-034
Identities = 20/67 (29%), Positives = 44/67 (65%)
Frame = -2 / +2
Query: 680 NTRNIVGDSIHTMGLRDLKQMEGKLEKAIIKIRARKNELLYAEVDYMQKREMDLQTDNMY 501
N R+ +G+ + ++ +++L+ +E +++ A+ +R+RKN+L+Y + +QK++ LQ N
Sbjct: 479 NQRHFMGEDLDSLNIKELQNLEHQIDSALKHVRSRKNQLMYESISELQKKDKALQEQNNM 658
Query: 500 LRSKIAE 480
L K+ E
Sbjct: 659 LAKKVKE 679
>gb|BU872670.1|BU872670 Q045E11 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 734
Score = 107 bits (229), Expect(2) = 1e-033
Identities = 43/65 (66%), Positives = 57/65 (87%)
Frame = -2 / +3
Query: 998 GRGKIEIKRIENTTSRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLYEYANNS 819
GRG+I++KRIEN +RQVTF +RR+GLLKKA+E+SVLCDAEVAL+VFS++G+L+EYA +S
Sbjct: 150 GRGRIQLKRIENKINRQVTFSERRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYATDS 329
Query: 818 VKSTI 804
I
Sbjct: 330 CMERI 344
Score = 59.7 bits (124), Expect(2) = 1e-033
Identities = 20/70 (28%), Positives = 44/70 (62%)
Frame = -2 / +3
Query: 680 NTRNIVGDSIHTMGLRDLKQMEGKLEKAIIKIRARKNELLYAEVDYMQKREMDLQTDNMY 501
N R+ +G+ + + +++L+ +E +++ A+ +R+RKN+L+Y + +QK++ LQ N
Sbjct: 471 NQRHFMGEDLDSSNIKELQNLEHQIDSALKHVRSRKNQLMYESISELQKKDKALQEQNNM 650
Query: 500 LRSKIAESNE 471
L K+ E +
Sbjct: 651 LAKKVKEKEK 680
>gb|CV256507.1|CV256507 WS0244.B21_A19 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS0244_A19 3', mRNA sequence
Length = 877
Score = 133 bits (284), Expect(2) = 2e-033
Identities = 51/71 (71%), Positives = 65/71 (91%)
Frame = -2 / -2
Query: 890 LCDAEVALVVFSSRGRLYEYANNSVKSTIERYKKANSDSSNSGTVAEVNAQYYQQESSKL 711
LCDAEV+L+VFSSRGRLYEYANN+++STI+RYKK +SDSSN+ ++ E+NAQYYQQES+K+
Sbjct: 876 LCDAEVSLIVFSSRGRLYEYANNNIRSTIDRYKKVSSDSSNTASITEINAQYYQQESAKM 697
Query: 710 RQMIHSLQNAN 678
RQ I LQN+N
Sbjct: 696 RQQIQLLQNSN 664
Score = 73.5 bits (154), Expect(2) = 1e-023
Identities = 37/59 (62%), Positives = 38/59 (64%)
Frame = +1 / +2
Query: 685 FCKLWIICRSLEDSCW*YWALTSATVPELEESLLAFLYLSMVDFTLLLAYS*RRPRLEK 861
FC I R DSC *YWAL S E S L FLYLS+VD LLLAYS*RRPRLEK
Sbjct: 671 FCSN*IC*RIFADSC**YWALISVIEAVFELSELTFLYLSIVDLILLLAYS*RRPRLEK 847
Score = 57.0 bits (118), Expect(2) = 1e-023
Identities = 33/66 (50%), Positives = 38/66 (57%)
Frame = +1 / +2
Query: 481 SAILLLRYMLSVCRSISLFCI*STSAYSSSFFLALILIMAFSSLPSICLRSLRPMVWMES 660
SAIL+ R LS SISLFCI S SA S+S F LIL+M SSL S C S + S
Sbjct: 470 SAILVRR*ALSFSSSISLFCIYSISASSNSCFFDLILVMPLSSLFSSCFSSFTDRLLTAS 649
Query: 661 PTMFLV 678
P L+
Sbjct: 650 PIKCLL 667
Score = 30.9 bits (61), Expect(2) = 2e-033
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -3 / -3
Query: 625 NKWRASWRKP*SRLELERMSCYTLKLTICKKGR 527
+ WR ++ * M+C LKL+IC+KGR
Sbjct: 614 SSWRIGSKEA*LESGQRSMNCC*LKLSICRKGR 516
>gb|DT521357.1|DT521357 WS02034.B21_B05 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02034_B05 3', mRNA sequence
Length = 783
Score = 107 bits (229), Expect(2) = 2e-033
Identities = 46/84 (54%), Positives = 61/84 (72%)
Frame = -2 / +2
Query: 1013 DRQGQGRGKIEIKRIENTTSRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLYE 834
D R KIEIKRI N ++RQVTF KRR GL KKA ELS+LC+A+VALVVFSS G+LY+
Sbjct: 194 DWSDMAREKIEIKRIANASARQVTFSKRRRGLFKKAQELSILCEADVALVVFSSTGKLYD 373
Query: 833 YANNSVKSTIERYKKANSDSSNSG 762
Y+++S+K +++Y S + G
Sbjct: 374 YSSSSMKMMLDKYILYPSSNRKDG 445
Score = 56.1 bits (116), Expect(2) = 2e-033
Identities = 22/66 (33%), Positives = 44/66 (66%)
Frame = -2 / +2
Query: 674 RNIVGDSIHTMGLRDLKQMEGKLEKAIIKIRARKNELLYAEVDYMQKREMDLQTDNMYLR 495
RNI G+ + + L+DL+Q+E +LE + K+R++K E + E++ +Q++ + + +N LR
Sbjct: 521 RNIHGEELEKLSLKDLQQLEEQLEAGLSKVRSQKGENILKEINELQQKGIRIIEENSKLR 700
Query: 494 SKIAES 477
+I E+
Sbjct: 701 REIKEA 718
>gb|BU868189.1|BU868189 M112C09 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 615
Score = 109 bits (233), Expect(2) = 5e-033
Identities = 44/65 (67%), Positives = 57/65 (87%)
Frame = -2 / +3
Query: 998 GRGKIEIKRIENTTSRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLYEYANNS 819
GRG+I++KRIEN +RQVTF KRR+GLLKKA+E+SVLCDAEVAL+VFS++G+L+EYA +S
Sbjct: 117 GRGRIQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYATDS 296
Query: 818 VKSTI 804
I
Sbjct: 297 CMERI 311
Score = 55.1 bits (114), Expect(2) = 5e-033
Identities = 17/58 (29%), Positives = 40/58 (68%)
Frame = -2 / +3
Query: 680 NTRNIVGDSIHTMGLRDLKQMEGKLEKAIIKIRARKNELLYAEVDYMQKREMDLQTDN 507
N R+ +G+ + ++ +++L+ +E +++ A+ +R+RKN+L+Y + +QK++ LQ N
Sbjct: 438 NQRHFMGEDLDSLNIKELQNLEHQIDSALKHVRSRKNQLMYESISELQKKDKALQEQN 611
>gb|AY615966.1| Populus balsamifera subsp. trichocarpa APETALA1-like MADS-box
PTAP1-2 mRNA, complete cds
Length = 1146
Score = 102 bits (217), Expect(3) = 8e-033
Identities = 40/59 (67%), Positives = 52/59 (88%)
Frame = -2 / +2
Query: 998 GRGKIEIKRIENTTSRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLYEYANN 822
GRG++++KRIEN +RQVTF KRR GLLKKA E+SVLCDAEVAL+VFS +G+L+EY+ +
Sbjct: 167 GRGRVQLKRIENKINRQVTFSKRRTGLLKKANEISVLCDAEVALIVFSHKGKLFEYSTD 343
Score = 58.8 bits (122), Expect(3) = 8e-033
Identities = 24/74 (32%), Positives = 44/74 (59%)
Frame = -2 / +2
Query: 692 LQNANTRNIVGDSIHTMGLRDLKQMEGKLEKAIIKIRARKNELLYAEVDYMQKREMDLQT 513
L N RN +G+ + +M L++L+ +E +++ A+ IRARKN L+ + +Q++E +Q
Sbjct: 473 LLQRNHRNYLGEDLDSMSLKELQNLEQQIDTALKHIRARKNHLMSQSISELQRKEKAIQV 652
Query: 512 DNMYLRSKIAESNE 471
N L +I E +
Sbjct: 653 QNNMLVKQIKEKEK 694
Score = 24.4 bits (47), Expect(3) = 8e-033
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = -2 / +2
Query: 185 VQLLGYIYL*VPPLCACICTCEFSC 111
V +L YI + + C+ CEF C
Sbjct: 953 VMILKYILCVLMVITECMSECEFGC 1027
>gb|AY515153.1| Populus deltoides APETALA-like protein AP1 mRNA, complete cds
Length = 1109
Score = 106 bits (227), Expect(2) = 1e-032
Identities = 41/65 (63%), Positives = 57/65 (87%)
Frame = -2 / +3
Query: 998 GRGKIEIKRIENTTSRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLYEYANNS 819
GRG++++KRIEN SRQVTF KRR GLLKKA+E+SVLCDA+VA++VFS++G+L+EY+ +S
Sbjct: 81 GRGRVQLKRIENNISRQVTFSKRRTGLLKKAHEISVLCDADVAVIVFSTKGKLFEYSTDS 260
Query: 818 VKSTI 804
+I
Sbjct: 261 SMESI 275
Score = 53.8 bits (111), Expect(2) = 1e-032
Identities = 22/69 (31%), Positives = 39/69 (56%)
Frame = -2 / +3
Query: 692 LQNANTRNIVGDSIHTMGLRDLKQMEGKLEKAIIKIRARKNELLYAEVDYMQKREMDLQT 513
L N RN G + + ++L +E K++ A+ +R+RKN+L++ + MQK+E LQ
Sbjct: 387 LLQRNLRNYTGQDLDPLSYKELHHLEQKIDTALKSVRSRKNQLVHESLAEMQKKEKALQD 566
Query: 512 DNMYLRSKI 486
N L ++
Sbjct: 567 QNNILVEQV 593
>gb|AY615964.1| Populus balsamifera subsp. trichocarpa APETALA1-like MADS-box
PTAP1-1 mRNA, complete cds
Length = 942
Score = 107 bits (228), Expect(2) = 5e-032
Identities = 42/65 (64%), Positives = 55/65 (84%)
Frame = -2 / +1
Query: 998 GRGKIEIKRIENTTSRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLYEYANNS 819
GRG++++KRIEN +RQVTF KRR GLLKKA+E+SVLCDAEVAL+VFS +G+L+EY+ N+
Sbjct: 28 GRGRVQLKRIENKINRQVTFSKRRTGLLKKAHEISVLCDAEVALIVFSHKGKLFEYSTNA 207
Query: 818 VKSTI 804
I
Sbjct: 208 CMEKI 222
Score = 51.5 bits (106), Expect(2) = 5e-032
Identities = 21/74 (28%), Positives = 43/74 (58%)
Frame = -2 / +1
Query: 692 LQNANTRNIVGDSIHTMGLRDLKQMEGKLEKAIIKIRARKNELLYAEVDYMQKREMDLQT 513
L N R+ +G+ + ++ L++L+ +E +++ A+ IR RKN L+Y + +Q +E ++
Sbjct: 334 LLQRNHRHYLGEDLDSVSLKELQNLEQQIDTALKLIRERKNHLMYQSISELQIKEKAIKE 513
Query: 512 DNMYLRSKIAESNE 471
N L +I E +
Sbjct: 514 QNNMLVKQIKEKEK 555
>gb|AY359607.1| Populus yunnanensis sex male AGAMOUS (AG2) gene, partial cds
Length = 227
Score = 136 bits (292), Expect = 2e-031
Identities = 57/69 (82%), Positives = 62/69 (89%)
Frame = -2 / +1
Query: 1028 PTGSGDRQGQGRGKIEIKRIENTTSRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSR 849
P S + GRGK+EIKRIENTT+RQVTFCKRRNGLLKKAYELSVLCDAEVAL+VFSSR
Sbjct: 19 PQESSPLRKLGRGKVEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSR 198
Query: 848 GRLYEYANN 822
GRLYEY+NN
Sbjct: 199 GRLYEYSNN 225
>gb|AY359609.1| Populus tomentosa sex female AGAMOUS (AG2) gene, partial cds
Length = 227
Score = 136 bits (292), Expect = 2e-031
Identities = 57/69 (82%), Positives = 62/69 (89%)
Frame = -2 / +1
Query: 1028 PTGSGDRQGQGRGKIEIKRIENTTSRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSR 849
P S + GRGK+EIKRIENTT+RQVTFCKRRNGLLKKAYELSVLCDAEVAL+VFSSR
Sbjct: 19 PQESSPLRKLGRGKVEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSR 198
Query: 848 GRLYEYANN 822
GRLYEY+NN
Sbjct: 199 GRLYEYSNN 225
>gb|AF034094.2| Populus tremuloides PTM2 mRNA, complete cds
Length = 969
Score = 104 bits (221), Expect(2) = 4e-031
Identities = 41/65 (63%), Positives = 54/65 (83%)
Frame = -2 / +1
Query: 998 GRGKIEIKRIENTTSRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLYEYANNS 819
GRG++++KRIEN +RQVTF KRR GLLKKA+E+SVLCDAEVAL+VF +G+L+EY+ N+
Sbjct: 22 GRGRVQLKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALIVFCHKGKLFEYSTNA 201
Query: 818 VKSTI 804
I
Sbjct: 202 CMEKI 216
Score = 51.5 bits (106), Expect(2) = 4e-031
Identities = 21/74 (28%), Positives = 43/74 (58%)
Frame = -2 / +1
Query: 692 LQNANTRNIVGDSIHTMGLRDLKQMEGKLEKAIIKIRARKNELLYAEVDYMQKREMDLQT 513
L N R+ +G+ + ++ L++L+ +E +++ A+ IR RKN L+Y + +Q +E ++
Sbjct: 328 LLQRNHRHYLGEDLDSVSLKELQNLEKQIDTALELIRERKNHLMYQSISELQIKEKAIKE 507
Query: 512 DNMYLRSKIAESNE 471
N L +I E +
Sbjct: 508 QNNMLVKQIKEKEK 549
>gb|BU871261.1|BU871261 Q028F06 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 731
Score = 135 bits (290), Expect = 5e-031
Identities = 56/103 (54%), Positives = 80/103 (77%)
Frame = -2 / +3
Query: 995 RGKIEIKRIENTTSRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLYEYANNSV 816
RGK +++RIEN TSRQVTF KRRNGLLKKA+ELSVLCDAEVA++VFS RG+LYE+ ++SV
Sbjct: 276 RGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVAVIVFSPRGKLYEFGSSSV 455
Query: 815 KSTIERYKKANSDSSNSGTVAEVNAQYYQQESSKLRQMIHSLQ 687
+ TIERY++ +S+ + +E N + + E++ + + I L+
Sbjct: 456 QETIERYQRHVKESNTNKQTSEQNVEQLKGEAASMIKKIEILE 584
>gb|BU891075.1|BU891075 P045E12 Populus petioles cDNA library Populus tremula cDNA 5 prime,
mRNA sequence
Length = 529
Score = 135 bits (290), Expect = 5e-031
Identities = 56/103 (54%), Positives = 80/103 (77%)
Frame = -2 / +1
Query: 995 RGKIEIKRIENTTSRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLYEYANNSV 816
RGK +++RIEN TSRQVTF KRRNGLLKKA+ELSVLCDAEVA++VFS RG+LYE+ ++SV
Sbjct: 136 RGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVAVIVFSPRGKLYEFGSSSV 315
Query: 815 KSTIERYKKANSDSSNSGTVAEVNAQYYQQESSKLRQMIHSLQ 687
+ TIERY++ +S+ + +E N + + E++ + + I L+
Sbjct: 316 QETIERYQRHVKESNTNKQTSEQNVEQLKGEAASMIKKIEILE 444
>gb|BU875666.1|BU875666 V009G10 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 642
Score = 135 bits (289), Expect = 6e-031
Identities = 55/103 (53%), Positives = 81/103 (78%)
Frame = -2 / +1
Query: 995 RGKIEIKRIENTTSRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLYEYANNSV 816
RGK +++RIEN TSRQVTF KRRNGLLKKA+ELSVLCDAEVA++VF+ RG+LYE+ ++SV
Sbjct: 232 RGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVAVIVFAPRGKLYEFGSSSV 411
Query: 815 KSTIERYKKANSDSSNSGTVAEVNAQYYQQESSKLRQMIHSLQ 687
+ TIERY++ +S+ + +E+N + + E++ + + I L+
Sbjct: 412 QETIERYQRHVKESNTNKQTSELNMEQLKGEAASMIKKIEILE 540
>gb|BU876515.1|BU876515 V021F11 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 513
Score = 134 bits (288), Expect = 9e-031
Identities = 56/103 (54%), Positives = 79/103 (76%)
Frame = -2 / +3
Query: 995 RGKIEIKRIENTTSRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLYEYANNSV 816
RGK +++RIEN TSRQVTF KRRNGLLKKA+ELSVLCDAEVAL+VFS RG+LYE+A+ S+
Sbjct: 120 RGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGKLYEFASTSM 299
Query: 815 KSTIERYKKANSDSSNSGTVAEVNAQYYQQESSKLRQMIHSLQ 687
+ TIERY++ +++ + E N ++E++ + + I L+
Sbjct: 300 QETIERYRRHVKENNTNKQPVEQNMLQLKEEAASMIKKIEHLE 428
>gb|CK098276.1|CK098276 A010P29.5pR Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA clone A010P29 5', mRNA sequence
Length = 382
Score = 134 bits (288), Expect = 9e-031
Identities = 58/103 (56%), Positives = 79/103 (76%)
Frame = -2 / +2
Query: 995 RGKIEIKRIENTTSRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLYEYANNSV 816
RGK ++KRIEN TSRQVTF KRRNGLLKKA+ELSVLCDAEVAL+VFS+RG+LYE++++S+
Sbjct: 65 RGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSTRGKLYEFSSSSM 244
Query: 815 KSTIERYKKANSDSSNSGTVAEVNAQYYQQESSKLRQMIHSLQ 687
TIERY+K D S + + + Q ++++ L + I L+
Sbjct: 245 NRTIERYQKRAKDVGISSKMVKDSMQPVKEDAFTLAKKIDILE 373
>gb|DT472398.1|DT472398 WS01226.BR.1_F17 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01226_F17 5', mRNA sequence
Length = 886
Score = 134 bits (288), Expect = 9e-031
Identities = 56/103 (54%), Positives = 79/103 (76%)
Frame = -2 / +3
Query: 995 RGKIEIKRIENTTSRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLYEYANNSV 816
RGK +++RIEN TSRQVTF KRRNGLLKKA+ELSVLCDAEVAL+VFS RG+LYE+A+ S+
Sbjct: 501 RGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGKLYEFASTSM 680
Query: 815 KSTIERYKKANSDSSNSGTVAEVNAQYYQQESSKLRQMIHSLQ 687
+ TIERY++ +++ + E N ++E++ + + I L+
Sbjct: 681 QETIERYRRHVKENNTNKQPVEQNMLQLKEEAASMIKKIEHLE 809
>gb|AY359611.1| Populus tomentosa sex male AGAMOUS (AG2) gene, partial cds
Length = 227
Score = 134 bits (287), Expect = 1e-030
Identities = 56/69 (81%), Positives = 62/69 (89%)
Frame = -2 / +1
Query: 1028 PTGSGDRQGQGRGKIEIKRIENTTSRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSR 849
P S + GRGK+EIKRIENTT+RQVTFCKRRNGLLKKAYELSVLCDAEVAL+VFSSR
Sbjct: 19 PLESSPLRKLGRGKVEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSR 198
Query: 848 GRLYEYANN 822
GRLYEY+N+
Sbjct: 199 GRLYEYSND 225
>gb|CN523813.1|CN523813 GQ015M05.T3_C05 GQ015 Populus trichocarpa x Populus deltoides cDNA
clone GQ015M05_C05 5', mRNA sequence
Length = 814
Score = 105 bits (223), Expect(2) = 2e-030
Identities = 41/65 (63%), Positives = 56/65 (86%)
Frame = -2 / +1
Query: 989 KIEIKRIENTTSRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLYEYANNSVKS 810
KI+IK+I+N T+RQVTF KRR GL KKA ELSVLCDAEVA+++FS+ G+L+EY+++S+K
Sbjct: 4 KIKIKKIDNVTARQVTFSKRRRGLFKKAEELSVLCDAEVAVIIFSATGKLFEYSSSSMKD 183
Query: 809 TIERY 795
+ RY
Sbjct: 184 VLARY 198
Score = 48.3 bits (99), Expect(2) = 2e-030
Identities = 19/74 (25%), Positives = 42/74 (56%)
Frame = -2 / +1
Query: 674 RNIVGDSIHTMGLRDLKQMEGKLEKAIIKIRARKNELLYAEVDYMQKREMDLQTDNMYLR 495
R + G+ +H + + +L+Q+E LE + ++ K E + E+ ++++ + L +N L+
Sbjct: 313 RRMRGEDLHGLNIEELQQLEKALEVGLSRVLETKGERIMNEISTLERKGVQLLEENKQLK 492
Query: 494 SKIAESNETGQPAM 453
KIA + +PA+
Sbjct: 493 QKIATIYKGKRPAL 534
>gb|CN524016.1|CN524016 GQ015M03.T3_C05 GQ015 Populus trichocarpa x Populus deltoides cDNA
clone GQ015M03_C05 5', mRNA sequence
Length = 814
Score = 105 bits (223), Expect(2) = 2e-030
Identities = 41/65 (63%), Positives = 56/65 (86%)
Frame = -2 / +1
Query: 989 KIEIKRIENTTSRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLYEYANNSVKS 810
KI+IK+I+N T+RQVTF KRR GL KKA ELSVLCDAEVA+++FS+ G+L+EY+++S+K
Sbjct: 4 KIKIKKIDNVTARQVTFSKRRRGLFKKAEELSVLCDAEVAVIIFSATGKLFEYSSSSMKD 183
Query: 809 TIERY 795
+ RY
Sbjct: 184 VLARY 198
Score = 48.3 bits (99), Expect(2) = 2e-030
Identities = 19/74 (25%), Positives = 42/74 (56%)
Frame = -2 / +1
Query: 674 RNIVGDSIHTMGLRDLKQMEGKLEKAIIKIRARKNELLYAEVDYMQKREMDLQTDNMYLR 495
R + G+ +H + + +L+Q+E LE + ++ K E + E+ ++++ + L +N L+
Sbjct: 313 RRMRGEDLHGLNIEELQQLEKALEVGLSRVLETKGERIMNEISTLERKGVQLLEENKQLK 492
Query: 494 SKIAESNETGQPAM 453
KIA + +PA+
Sbjct: 493 QKIATIYKGKRPAL 534
>gb|AY359612.1| Populus tomentosa sex male AGAMOUS (AG1) gene, partial cds
Length = 227
Score = 133 bits (285), Expect = 2e-030
Identities = 54/59 (91%), Positives = 59/59 (100%)
Frame = -2 / +1
Query: 998 GRGKIEIKRIENTTSRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLYEYANN 822
GRGK+EIKRIENTT+RQVTFCKRR+GLLKKAYELSVLCDAEVAL+VFSSRGRLYEY+NN
Sbjct: 49 GRGKVEIKRIENTTNRQVTFCKRRSGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNN 225
>gb|AY359608.1| Populus yunnanensis sex male AGAMOUS (AG1) gene, partial cds
Length = 227
Score = 132 bits (282), Expect = 6e-030
Identities = 53/59 (89%), Positives = 59/59 (100%)
Frame = -2 / +1
Query: 998 GRGKIEIKRIENTTSRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLYEYANN 822
GRGK+EIKRIENTT+RQVTFCKRR+GLLKKAYELSVLCDAEVAL+VFS+RGRLYEY+NN
Sbjct: 49 GRGKVEIKRIENTTNRQVTFCKRRSGLLKKAYELSVLCDAEVALIVFSTRGRLYEYSNN 225
>gb|AY359610.1| Populus tomentosa sex female AGAMOUS (AG1) gene, partial cds
Length = 227
Score = 132 bits (282), Expect = 6e-030
Identities = 53/59 (89%), Positives = 59/59 (100%)
Frame = -2 / +1
Query: 998 GRGKIEIKRIENTTSRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLYEYANN 822
GRGK+EIKRIENTT+RQVTFCKRR+GLLKKAYELSVLCDAEVAL+VFS+RGRLYEY+NN
Sbjct: 49 GRGKVEIKRIENTTNRQVTFCKRRSGLLKKAYELSVLCDAEVALIVFSTRGRLYEYSNN 225
>gb|AY501392.1| Populus tomentosa MADS box transcription factor (MADS1) mRNA,
complete cds
Length = 1067
Score = 106 bits (226), Expect(2) = 7e-030
Identities = 42/67 (62%), Positives = 57/67 (85%)
Frame = -2 / +3
Query: 995 RGKIEIKRIENTTSRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLYEYANNSV 816
R KI+IK+I+N T+RQVTF KRR GL KKA ELSVLCDAEVA+++FS+ G+L+EY+++S+
Sbjct: 111 REKIKIKKIDNVTARQVTFSKRRRGLFKKAEELSVLCDAEVAVIIFSATGKLFEYSSSSM 290
Query: 815 KSTIERY 795
K + RY
Sbjct: 291 KGVLARY 311
Score = 45.1 bits (92), Expect(2) = 7e-030
Identities = 18/74 (24%), Positives = 40/74 (54%)
Frame = -2 / +3
Query: 674 RNIVGDSIHTMGLRDLKQMEGKLEKAIIKIRARKNELLYAEVDYMQKREMDLQTDNMYLR 495
R + G+ + + + +L+Q+E LE + ++ K E + E+ ++++ + L +N L+
Sbjct: 426 RRMRGEDLQGLNIEELQQLEKALEVGLSRVLETKGERIMNEISTLERKGVQLLEENKQLK 605
Query: 494 SKIAESNETGQPAM 453
KIA +PA+
Sbjct: 606 QKIATITRGKRPAL 647
>gb|BU834392.1|BU834392 T060E09 Populus apical shoot cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 629
Score = 106 bits (226), Expect(2) = 2e-029
Identities = 42/67 (62%), Positives = 57/67 (85%)
Frame = -2 / +1
Query: 995 RGKIEIKRIENTTSRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLYEYANNSV 816
R KI+IK+I+N T+RQVTF KRR GL KKA ELSVLCDAEVA+++FS+ G+L+EY+++S+
Sbjct: 88 REKIKIKKIDNVTARQVTFSKRRRGLFKKAEELSVLCDAEVAVIIFSATGKLFEYSSSSM 267
Query: 815 KSTIERY 795
K + RY
Sbjct: 268 KDVLARY 288
Score = 43.7 bits (89), Expect(2) = 2e-029
Identities = 18/74 (24%), Positives = 41/74 (55%)
Frame = -2 / +1
Query: 674 RNIVGDSIHTMGLRDLKQMEGKLEKAIIKIRARKNELLYAEVDYMQKREMDLQTDNMYLR 495
R + G+ + + + +L+Q+E LE + ++ K E + E+ ++++ + L +N L+
Sbjct: 403 RRMRGEDLQGLNIEELQQLEEALEVGLSRVLESKGERIMNEISTLERKGVQLLGENKQLK 582
Query: 494 SKIAESNETGQPAM 453
KIA + +PA+
Sbjct: 583 QKIATICKGKRPAL 624
Database: Populus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:49 PM
Number of letters in database: 203,408,664
Number of sequences in database: 369,679
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 476,396,124
Number of Sequences: 369679
Number of extensions: 6619368
Number of successful extensions: 54109
Number of sequences better than 1.0e-020: 145
length of database: 67,802,888
effective HSP length: 53
effective length of database: 48,209,901
effective search space used: 17403774261
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)