TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3802264.2.1
(1189 letters)
Database: Populus_nucl_with_EST.fasta
369,679 sequences; 203,408,664 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AY660968.1| Populus tremula x Populus tremuloides Cel9B ... 120 2e-057
dbj|D32166.1|POPCEL Populus alba mRNA for cellulase (endo-1... 125 7e-055
gb|DT515727.1|DT515727 WS02429.B21.1_F19 PTxD-ICC-N-A-14 Po... 125 4e-051
dbj|AB025796.1| Populus alba POPCEL2 mRNA for endo-1,4-beta... 122 5e-050
gb|CV272757.1|CV272757 WS0158.B21_J18 PTxN-IB-A-6 Populus t... 122 9e-049
gb|CX659368.1|CX659368 PO01029H05 Poplar SC cDNA library Po... 116 2e-046
gb|DT514735.1|DT514735 WS02425.B21_K05 PTxD-ICC-N-A-14 Popu... 120 3e-045
gb|CV267046.1|CV267046 WS02030.B21_K22 PTxN-IB-N-A-11 Popul... 125 4e-045
gb|CX653604.1|CX653604 PO02004D08 Poplar SC cDNA library Po... 119 3e-044
gb|CX658587.1|CX658587 PO01036G06 Poplar SC cDNA library Po... 122 3e-043
gb|DT519386.1|DT519386 WS02441.B21_F23 PTxD-ICC-N-A-14 Popu... 120 2e-042
gb|CX657483.1|CX657483 PO02048A07 Poplar SC cDNA library Po... 123 7e-042
dbj|AB049200.1| Populus alba PopCel2 gene for endo-1,4-beta... 92 3e-041
dbj|AB049199.1| Populus alba PopCel1 gene for endo-1,4-beta... 93 4e-041
gb|CV270742.1|CV270742 WS0152.B21_M22 PTxN-IB-A-6 Populus t... 78 4e-041
gb|CK087641.1|CK087641 A016P51.3pR Hybrid aspen plasmid lib... 98 4e-040
gb|DT525548.1|DT525548 WS02045.C21_K07 PTxN-IB-N-A-11 Popul... 128 3e-039
gb|DT513650.1|DT513650 WS02422.B21_K01 PTxD-ICC-N-A-14 Popu... 128 3e-039
gb|CX655743.1|CX655743 PO02039D08 Poplar SC cDNA library Po... 117 3e-038
gb|CA930454.1|CA930454 MTU4CA.P22.G09 Aspen apex cDNA Libra... 120 8e-038
gb|CX657081.1|CX657081 PO02059C06 Poplar SC cDNA library Po... 115 9e-038
gb|DV464578.1|DV464578 MTUNUL1.P29.C07 NUL Populus fremonti... 105 2e-037
gb|DT508178.1|DT508178 WS02420.BR_E10 PTxD-ICC-N-A-14 Popul... 94 2e-037
gb|DT512795.1|DT512795 WS02420.B21_E10 PTxD-ICC-N-A-14 Popu... 94 2e-037
gb|CV227953.1|CV227953 WS0168.B21_K23 PT-DX-A-7 Populus tri... 94 3e-036
gb|CN518303.1|CN518303 GQ0091.B3_F12 GQ009 Populus trichoca... 94 1e-034
gb|CA925970.1|CA925970 MTU7TL.P8.D02 Aspen leaf cDNA Librar... 91 8e-033
gb|CX654603.1|CX654603 PO02018B07 Poplar SC cDNA library Po... 104 2e-032
gb|CF119547.1|CF119547 MTU10CS.P3.C05 Aspen stem cDNA Libra... 94 2e-031
gb|CF119849.1|CF119849 MTU10CS.P7.B01 Aspen stem cDNA Libra... 94 2e-031
gb|CX655130.1|CX655130 PO02030C08 Poplar SC cDNA library Po... 88 2e-031
gb|CX654407.1|CX654407 PO02004C07 Poplar SC cDNA library Po... 88 2e-031
gb|DT475971.1|DT475971 WS0128.BR_N04 PT-GT-FL-A-3 Populus t... 90 3e-031
gb|CX657138.1|CX657138 PO02030F03 Poplar SC cDNA library Po... 88 4e-031
gb|CF119223.1|CF119223 MTU10CS.P15.B01 Aspen stem cDNA Libr... 94 8e-031
gb|CX657360.1|CX657360 PO02043C07 Poplar SC cDNA library Po... 95 8e-031
gb|DT515655.1|DT515655 WS02429.B21.1_C15 PTxD-ICC-N-A-14 Po... 66 1e-030
gb|CX655795.1|CX655795 PO02040B08 Poplar SC cDNA library Po... 123 4e-030
gb|BI129171.1|BI129171 G086P82Y Populus cambium cDNA librar... 120 2e-028
gb|CV245494.1|CV245494 WS0257.B21_J05 PT-MB-N-A-15 Populus ... 63 2e-028
gb|DT510953.1|DT510953 WS02429.BR_C15 PTxD-ICC-N-A-14 Popul... 64 6e-028
gb|BI129393.1|BI129393 G090P13Y Populus cambium cDNA librar... 83 7e-027
gb|CV236723.1|CV236723 WS01225.B21.1_C20 PT-GT-FL-A-3 Popul... 66 3e-026
gb|BU837593.1|BU837593 T103E10 Populus apical shoot cDNA li... 106 4e-026
gb|AY535003.1| Populus tremuloides endo-1,4-beta-glucanase ... 67 5e-026
gb|AY660967.1| Populus tremula x Populus tremuloides Cel9A ... 67 5e-026
gb|CV262163.1|CV262163 WS02018.B21_M22 PTxN-IB-N-A-11 Popul... 67 5e-026
gb|DT507184.1|DT507184 WS02417.BR_J07 PTxD-ICC-N-A-14 Popul... 67 5e-026
gb|CV266155.1|CV266155 WS02029.B21_E02 PTxN-IB-N-A-11 Popul... 67 5e-026
gb|BI128462.1|BI128462 G076P64Y Populus cambium cDNA librar... 67 5e-026
gb|CX660404.1|CX660404 PO01032G03 Poplar SC cDNA library Po... 88 7e-026
gb|CX657515.1|CX657515 PO02049C02 Poplar SC cDNA library Po... 118 8e-026
gb|DN499693.1|DN499693 T078C12.5pR Populus shoot meristem c... 69 1e-025
gb|CA932223.1|CA932223 MTU5CS.P10.B12 Aspen stem cDNA Libra... 69 1e-025
gb|DN496569.1|DN496569 P078B11.5pR Populus petioles cDNA li... 66 1e-025
gb|CA932541.1|CA932541 MTU5CS.P14.D02 Aspen stem cDNA Libra... 68 6e-025
gb|CV228003.1|CV228003 WS0168.B21_N05 PT-DX-A-7 Populus tri... 68 8e-025
gb|CV130556.1|CV130556 B9SP04b08 Populus stem seasonal libr... 68 8e-025
gb|CV230596.1|CV230596 WS0192.B21_A18 PT-DX-N-A-10 Populus ... 68 8e-025
gb|DT516843.1|DT516843 WS02432.B21_J05 PTxD-ICC-N-A-14 Popu... 65 8e-025
gb|CX655043.1|CX655043 PO01004B06 Poplar SC cDNA library Po... 74 8e-025
gb|BI130837.1|BI130837 G111P47Y Populus cambium cDNA librar... 67 8e-025
gb|BI127931.1|BI127931 G068P36Y Populus cambium cDNA librar... 67 8e-025
gb|BI131914.1|BI131914 G127P54Y Populus cambium cDNA librar... 68 1e-024
gb|CV261013.1|CV261013 WS02015.B21_J20 PTxN-IB-N-A-11 Popul... 67 2e-024
gb|CV270355.1|CV270355 WS0151.B21_M11 PTxN-IB-A-6 Populus t... 67 2e-024
gb|CV271368.1|CV271368 WS0154.B21_I07 PTxN-IB-A-6 Populus t... 67 2e-024
gb|DT522442.1|DT522442 WS02036.B21_P20 PTxN-IB-N-A-11 Popul... 67 2e-024
gb|BU897803.1|BU897803 X069H06 Populus wood cDNA library Po... 67 2e-024
gb|CA927392.1|CA927392 MTU6CR.P8.D11 Aspen root cDNA Librar... 67 2e-024
gb|CN519498.1|CN519498 GQ0102.B3_O10 GQ010 Populus trichoca... 67 2e-024
gb|CV265325.1|CV265325 WS02026.B21_P03 PTxN-IB-N-A-11 Popul... 67 3e-024
gb|CV270811.1|CV270811 WS0153.B21_A01 PTxN-IB-A-6 Populus t... 67 3e-024
gb|DT470270.1|DT470270 WS01920.C21_F21 PT-DX-N-A-10 Populus... 66 4e-024
gb|DT514739.1|DT514739 WS02425.B21_K09 PTxD-ICC-N-A-14 Popu... 78 4e-024
gb|DV466210.1|DV466210 MTUNUL1.P48.G03 NUL Populus fremonti... 105 6e-024
gb|CX654638.1|CX654638 PO02057C11 Poplar SC cDNA library Po... 73 7e-024
gb|BU896200.1|BU896200 X037B03 Populus wood cDNA library Po... 66 2e-023
gb|CX655021.1|CX655021 PO01003H07 Poplar SC cDNA library Po... 69 2e-023
gb|BI128418.1|BI128418 G075P56Y Populus cambium cDNA librar... 67 3e-023
gb|CV270845.1|CV270845 WS0153.B21_B14 PTxN-IB-A-6 Populus t... 83 4e-023
gb|CX657589.1|CX657589 PO02055H12 Poplar SC cDNA library Po... 107 2e-022
gb|CX175703.1|CX175703 C06_69-40_06.ab1 leaf inoculated wit... 67 2e-022
gb|DT511836.1|DT511836 WS02417.B21_J07 PTxD-ICC-N-A-14 Popu... 66 5e-022
gb|CX657584.1|CX657584 PO02055D09 Poplar SC cDNA library Po... 65 1e-021
gb|DT520699.1|DT520699 WS02448.B21_E15 PTxD-ICC-N-A-14 Popu... 72 5e-021
gb|CX656645.1|CX656645 PO02021B01 Poplar SC cDNA library Po... 77 6e-021
gb|CF235915.1|CF235915 PtaJXT0028E1E0109 Poplar cDNA librar... 66 7e-021
gb|DT470365.1|DT470365 WS01920.C21_K15 PT-DX-N-A-10 Populus... 67 9e-021
>gb|AY660968.1| Populus tremula x Populus tremuloides Cel9B mRNA, complete cds
Length = 1461
Score = 120 bits (256), Expect(5) = 2e-057
Identities = 50/118 (42%), Positives = 73/118 (61%)
Frame = +1 / +1
Query: 349 QNFKSQADNFVCAVLPDTAFHQVFITPGGVIHLRDGANSQYVTSTAFLLVVYADLLLRTG 528
+ F+ +A++F+C +LP++ + T GG+++ +N QYVTS FLL YA + T
Sbjct: 886 EQFEGEAESFMCRILPNSPYKTTQYTQGGLMYKLPESNLQYVTSITFLLTTYAKYMKATR 1065
Query: 529 QTVLCGNQPLPPARLHEFARQQMDYLLGANPRHSSYVVGFGANPPTQPHHRGASTPVL 702
T CGN + P L A++Q+DY+LG NP SY+VGFG N P + HHRG+S P L
Sbjct: 1066 HTFNCGNLLVTPNSLLYVAKRQVDYILGENPIRMSYMVGFGPNFPKRIHHRGSSLPSL 1239
Score = 83.1 bits (175), Expect(5) = 2e-057
Identities = 32/63 (50%), Positives = 43/63 (68%)
Frame = +1 / +1
Query: 718 VNCGLSFGDWMAPDKPNPNELTGAIVGGPDKNDGFVDKRGNSSYTEPCTYINSLAIGPLA 897
+ C F + PNPN LTGAIVGGP++NDG+ D+R + S++EP TYIN+ +GPLA
Sbjct: 1258 IGCDSGFEPFFHSANPNPNILTGAIVGGPNQNDGYPDERSDYSHSEPATYINAAMVGPLA 1437
Query: 898 ALA 906
A
Sbjct: 1438 YFA 1446
Score = 38.2 bits (77), Expect(5) = 2e-057
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +1 / +1
Query: 139 CPFYCSYSGYNDE 177
CPFYCSYSGY DE
Sbjct: 673 CPFYCSYSGYKDE 711
Score = 30.9 bits (61), Expect(5) = 2e-057
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +1 / +1
Query: 52 DKKYSRKLLNKAKLLFTFAKSHLGSY 129
D+KYS LL A+ +F FA + G+Y
Sbjct: 571 DRKYSALLLRTARKVFQFAMQYQGAY 648
Score = 25.8 bits (50), Expect(5) = 2e-057
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = +1 / +1
Query: 274 FSWDLKFPGAQVLLA 318
FSWD K+ G VLL+
Sbjct: 808 FSWDNKYAGVHVLLS 852
>dbj|D32166.1|POPCEL Populus alba mRNA for cellulase (endo-1,4-beta-glucanase), complete
cds
Length = 1580
Score = 125 bits (267), Expect(5) = 7e-055
Identities = 54/130 (41%), Positives = 75/130 (57%)
Frame = +1 / +3
Query: 307 VLLAEFNMTSAGGAQNFKSQADNFVCAVLPDTAFHQVFITPGGVIHLRDGANSQYVTSTA 486
+L EF + Q +KS +DN++C+++P T+ Q TPGG+ + +N QYVTST
Sbjct: 888 LLSKEFLEKTTEEFQLYKSHSDNYICSLIPGTSSFQAQYTPGGLFYKASESNLQYVTSTT 1067
Query: 487 FLLVVYADLLLRTGQTVLCGNQPLPPARLHEFARQQMDYLLGANPRHSSYVVGFGANPPT 666
FLL+ YA L G CG + L A++Q+DY+LG NP SY+VGFG P
Sbjct: 1068 FLLLTYAKYLGSNGGVARCGGSTVTAESLIAQAKKQVDYILGDNPARMSYMVGFGNRYPQ 1247
Query: 667 QPHHRGASTP 696
HHRG+S P
Sbjct: 1248 HVHHRGSSVP 1277
Score = 68.9 bits (144), Expect(5) = 7e-055
Identities = 26/50 (52%), Positives = 32/50 (64%)
Frame = +1 / +3
Query: 763 PNPNELTGAIVGGPDKNDGFVDKRGNSSYTEPCTYINSLAIGPLAALAVR 912
PNPN L GAI+GGPD D F D R N +EP TYIN+ +G LA + +
Sbjct: 1344 PNPNVLVGAIIGGPDNRDNFADSRNNYQQSEPATYINAPFVGALAFFSAK 1493
Score = 38.2 bits (77), Expect(5) = 7e-055
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +1 / +3
Query: 139 CPFYCSYSGYNDE 177
CPFYCSYSGY DE
Sbjct: 705 CPFYCSYSGYQDE 743
Score = 30.4 bits (60), Expect(5) = 7e-055
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +1 / +3
Query: 52 DKKYSRKLLNKAKLLFTFAKSHLGSY 129
D YS KLL+ A +F FA + GSY
Sbjct: 603 DPSYSTKLLHTAMKVFDFADRYRGSY 680
Score = 26.7 bits (52), Expect(5) = 7e-055
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = +1 / +3
Query: 274 FSWDLKFPGAQVLLAE 321
FSWD K PG ++LL++
Sbjct: 852 FSWDDKRPGTKILLSK 899
>gb|DT515727.1|DT515727 WS02429.B21.1_F19 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02429_F19 3', mRNA sequence
Length = 944
Score = 125 bits (267), Expect(4) = 4e-051
Identities = 54/130 (41%), Positives = 75/130 (57%)
Frame = +1 / -2
Query: 307 VLLAEFNMTSAGGAQNFKSQADNFVCAVLPDTAFHQVFITPGGVIHLRDGANSQYVTSTA 486
+L EF + Q +KS +DN++C+++P T+ Q TPGG+ + +N QYVTST
Sbjct: 736 LLSKEFLEKTTEEFQLYKSHSDNYICSLIPGTSSFQAQYTPGGLFYKASESNLQYVTSTT 557
Query: 487 FLLVVYADLLLRTGQTVLCGNQPLPPARLHEFARQQMDYLLGANPRHSSYVVGFGANPPT 666
FLL+ YA L G CG + L A++Q+DY+LG NP SY+VGFG P
Sbjct: 556 FLLLTYAKYLGSNGGVARCGGSTVTAESLIAQAKKQVDYILGDNPARMSYMVGFGNRYPQ 377
Query: 667 QPHHRGASTP 696
HHRG+S P
Sbjct: 376 HVHHRGSSVP 347
Score = 68.9 bits (144), Expect(4) = 4e-051
Identities = 27/53 (50%), Positives = 33/53 (62%)
Frame = +1 / -2
Query: 763 PNPNELTGAIVGGPDKNDGFVDKRGNSSYTEPCTYINSLAIGPLAALAVRGVQ 921
PNPN L GAI+GGPD D F D R N +EP TYIN+ +G LA + + Q
Sbjct: 280 PNPNVLVGAIIGGPDNRDNFADDRNNYQQSEPATYINAPFVGALAFFSAKN*Q 122
Score = 38.2 bits (77), Expect(4) = 4e-051
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +1 / -2
Query: 139 CPFYCSYSGYNDE 177
CPFYCSYSGY DE
Sbjct: 919 CPFYCSYSGYQDE 881
Score = 26.7 bits (52), Expect(4) = 4e-051
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = +1 / -2
Query: 274 FSWDLKFPGAQVLLAE 321
FSWD K PG ++LL++
Sbjct: 772 FSWDDKRPGTKILLSK 725
>dbj|AB025796.1| Populus alba POPCEL2 mRNA for endo-1,4-beta glucanase, complete cds
Length = 1616
Score = 122 bits (260), Expect(4) = 5e-050
Identities = 53/130 (40%), Positives = 75/130 (57%)
Frame = +1 / +2
Query: 307 VLLAEFNMTSAGGAQNFKSQADNFVCAVLPDTAFHQVFITPGGVIHLRDGANSQYVTSTA 486
+L EF + Q +KS +DN++C+++P ++ Q TPGG+ + +N QYVTST
Sbjct: 896 LLSKEFLDKTTEEFQIYKSHSDNYICSLMPGSSSFQAQYTPGGLFYKATESNLQYVTSTT 1075
Query: 487 FLLVVYADLLLRTGQTVLCGNQPLPPARLHEFARQQMDYLLGANPRHSSYVVGFGANPPT 666
FLL+ YA L G CG + L A++Q+DY+LG NP SY+VGFG P
Sbjct: 1076 FLLLTYAKYLGSNGGVAKCGGSTVTAESLIAQAKKQVDYILGDNPAKMSYMVGFGNKYPQ 1255
Query: 667 QPHHRGASTP 696
HHRG+S P
Sbjct: 1256 HVHHRGSSVP 1285
Score = 68.4 bits (143), Expect(4) = 5e-050
Identities = 27/56 (48%), Positives = 34/56 (60%)
Frame = +1 / +2
Query: 745 WMAPDKPNPNELTGAIVGGPDKNDGFVDKRGNSSYTEPCTYINSLAIGPLAALAVR 912
++ PNPN L GAIVGGPD D F D R N +EP TYIN+ +G LA + +
Sbjct: 1334 YLYSSSPNPNVLVGAIVGGPDNRDHFADDRNNYQQSEPATYINAPFVGALAFFSAK 1501
Score = 38.2 bits (77), Expect(4) = 5e-050
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +1 / +2
Query: 139 CPFYCSYSGYNDE 177
CPFYCSYSGY DE
Sbjct: 713 CPFYCSYSGYQDE 751
Score = 26.7 bits (52), Expect(4) = 5e-050
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = +1 / +2
Query: 274 FSWDLKFPGAQVLLAE 321
FSWD K PG ++LL++
Sbjct: 860 FSWDDKRPGTKILLSK 907
>gb|CV272757.1|CV272757 WS0158.B21_J18 PTxN-IB-A-6 Populus trichocarpa x Populus nigra cDNA
clone WS0158_J18 3', mRNA sequence
Length = 917
Score = 122 bits (261), Expect(3) = 9e-049
Identities = 51/118 (43%), Positives = 73/118 (61%)
Frame = +1 / -2
Query: 349 QNFKSQADNFVCAVLPDTAFHQVFITPGGVIHLRDGANSQYVTSTAFLLVVYADLLLRTG 528
+ F+ +A+NF+C +LP++ + T GG+++ +N QYVTS FLL YA + T
Sbjct: 745 EQFEGEAENFMCRILPNSPYKTTQYTQGGLMYKLPESNLQYVTSITFLLTTYAKYMKATR 566
Query: 529 QTVLCGNQPLPPARLHEFARQQMDYLLGANPRHSSYVVGFGANPPTQPHHRGASTPVL 702
T CGN + P L A++Q+DY+LG NP SY+VGFG N P + HHRG+S P L
Sbjct: 565 HTFNCGNLLVTPNSLLYVAKRQVDYILGENPIRMSYMVGFGPNFPKRIHHRGSSLPSL 392
Score = 83.1 bits (175), Expect(3) = 9e-049
Identities = 32/63 (50%), Positives = 43/63 (68%)
Frame = +1 / -2
Query: 718 VNCGLSFGDWMAPDKPNPNELTGAIVGGPDKNDGFVDKRGNSSYTEPCTYINSLAIGPLA 897
+ C F + PNPN LTGAIVGGP++NDG+ D+R + S++EP TYIN+ +GPLA
Sbjct: 373 IGCDSGFEPFFHSANPNPNILTGAIVGGPNQNDGYPDERSDYSHSEPATYINAAMVGPLA 194
Query: 898 ALA 906
A
Sbjct: 193 YFA 185
Score = 27.6 bits (54), Expect(3) = 9e-049
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +1 / -2
Query: 274 FSWDLKFPGAQVLLA 318
FSWD K+ GA VLL+
Sbjct: 823 FSWDNKYAGAHVLLS 779
>gb|CX659368.1|CX659368 PO01029H05 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO01029H05 5', mRNA sequence
Length = 698
Score = 116 bits (248), Expect(3) = 2e-046
Identities = 50/118 (42%), Positives = 72/118 (61%)
Frame = +1 / +3
Query: 349 QNFKSQADNFVCAVLPDTAFHQVFITPGGVIHLRDGANSQYVTSTAFLLVVYADLLLRTG 528
+ F++ A++F+C +LP++ + T GG+++ N QYVTS FLL YA + T
Sbjct: 138 EQFEA*AESFMCRILPNSPYKTTQYTQGGLMYKLPENNLQYVTSITFLLTTYAKYMKATR 317
Query: 529 QTVLCGNQPLPPARLHEFARQQMDYLLGANPRHSSYVVGFGANPPTQPHHRGASTPVL 702
T CGN + P L A++Q+DY+LG NP SY+VGFG N P + HHRG+S P L
Sbjct: 318 HTFNCGNLLVTPNSLIYVAKRQVDYILGENPIRMSYMVGFGPNFPKRIHHRGSSLPSL 491
Score = 83.1 bits (175), Expect(3) = 2e-046
Identities = 32/63 (50%), Positives = 43/63 (68%)
Frame = +1 / +3
Query: 718 VNCGLSFGDWMAPDKPNPNELTGAIVGGPDKNDGFVDKRGNSSYTEPCTYINSLAIGPLA 897
+ C F + PNPN LTGAIVGGP++NDG+ D+R + S++EP TYIN+ +GPLA
Sbjct: 510 IGCDSGFEPFFHSANPNPNILTGAIVGGPNQNDGYPDERSDYSHSEPATYINAAMVGPLA 689
Query: 898 ALA 906
A
Sbjct: 690 YFA 698
Score = 25.8 bits (50), Expect(3) = 2e-046
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = +1 / +3
Query: 274 FSWDLKFPGAQVLLA 318
FSWD K+ G VLL+
Sbjct: 60 FSWDNKYAGVHVLLS 104
>gb|DT514735.1|DT514735 WS02425.B21_K05 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02425_K05 3', mRNA sequence
Length = 840
Score = 120 bits (256), Expect(2) = 3e-045
Identities = 50/118 (42%), Positives = 73/118 (61%)
Frame = +1 / -1
Query: 349 QNFKSQADNFVCAVLPDTAFHQVFITPGGVIHLRDGANSQYVTSTAFLLVVYADLLLRTG 528
+ F+ +A++F+C +LP++ + T GG+++ +N QYVTS FLL YA + T
Sbjct: 810 EQFEGEAESFMCRILPNSPYKTTQYTQGGLMYKLPESNLQYVTSITFLLTTYAKYMKATR 631
Query: 529 QTVLCGNQPLPPARLHEFARQQMDYLLGANPRHSSYVVGFGANPPTQPHHRGASTPVL 702
T CGN + P L A++Q+DY+LG NP SY+VGFG N P + HHRG+S P L
Sbjct: 630 HTFNCGNLLVTPNSLLYVAKRQVDYILGENPIRMSYMVGFGPNFPKRIHHRGSSLPSL 457
Score = 83.1 bits (175), Expect(2) = 3e-045
Identities = 32/63 (50%), Positives = 43/63 (68%)
Frame = +1 / -1
Query: 718 VNCGLSFGDWMAPDKPNPNELTGAIVGGPDKNDGFVDKRGNSSYTEPCTYINSLAIGPLA 897
+ C F + PNPN LTGAIVGGP++NDG+ D+R + S++EP TYIN+ +GPLA
Sbjct: 438 IGCDSGFEPFFHSANPNPNILTGAIVGGPNQNDGYPDERSDYSHSEPATYINAAMVGPLA 259
Query: 898 ALA 906
A
Sbjct: 258 YFA 250
>gb|CV267046.1|CV267046 WS02030.B21_K22 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02030_K22 3', mRNA sequence
Length = 946
Score = 125 bits (267), Expect(3) = 4e-045
Identities = 54/130 (41%), Positives = 75/130 (57%)
Frame = +1 / -1
Query: 307 VLLAEFNMTSAGGAQNFKSQADNFVCAVLPDTAFHQVFITPGGVIHLRDGANSQYVTSTA 486
+L EF + Q +KS +DN++C+++P T+ Q TPGG+ + +N QYVTST
Sbjct: 817 LLSKEFLEKTTEEFQLYKSHSDNYICSLIPGTSSFQAQYTPGGLFYKASESNLQYVTSTT 638
Query: 487 FLLVVYADLLLRTGQTVLCGNQPLPPARLHEFARQQMDYLLGANPRHSSYVVGFGANPPT 666
FLL+ YA L G CG + L A++Q+DY+LG NP SY+VGFG P
Sbjct: 637 FLLLTYAKYLGSNGGVARCGGSTVTAESLIAQAKKQVDYILGDNPARMSYMVGFGNRYPQ 458
Query: 667 QPHHRGASTP 696
HHRG+S P
Sbjct: 457 HVHHRGSSVP 428
Score = 68.9 bits (144), Expect(3) = 4e-045
Identities = 27/53 (50%), Positives = 33/53 (62%)
Frame = +1 / -1
Query: 763 PNPNELTGAIVGGPDKNDGFVDKRGNSSYTEPCTYINSLAIGPLAALAVRGVQ 921
PNPN L GAI+GGPD D F D R N +EP TYIN+ +G LA + + Q
Sbjct: 361 PNPNVLVGAIIGGPDNRDNFADDRNNYQQSEPATYINAPFVGALAFFSAKN*Q 203
Score = 26.7 bits (52), Expect(3) = 4e-045
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = +1 / -1
Query: 274 FSWDLKFPGAQVLLAE 321
FSWD K PG ++LL++
Sbjct: 853 FSWDDKRPGTKILLSK 806
>gb|CX653604.1|CX653604 PO02004D08 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO02004D08 5', mRNA sequence
Length = 603
Score = 119 bits (254), Expect(2) = 3e-044
Identities = 50/118 (42%), Positives = 73/118 (61%)
Frame = +1 / +3
Query: 349 QNFKSQADNFVCAVLPDTAFHQVFITPGGVIHLRDGANSQYVTSTAFLLVVYADLLLRTG 528
+ F+++A++F+C +LP++ + T GG+++ N QYVTS FLL YA + T
Sbjct: 57 EQFEAEAESFMCRILPNSPYKTTQYTQGGLMYKLPENNLQYVTSITFLLTTYAKYMKATR 236
Query: 529 QTVLCGNQPLPPARLHEFARQQMDYLLGANPRHSSYVVGFGANPPTQPHHRGASTPVL 702
T CGN + P L A++Q+DY+LG NP SY+VGFG N P + HHRG+S P L
Sbjct: 237 HTFNCGNLLVTPNSLLYVAKRQVDYILGENPIRMSYMVGFGPNFPKRIHHRGSSLPSL 410
Score = 80.3 bits (169), Expect(2) = 3e-044
Identities = 30/58 (51%), Positives = 40/58 (68%)
Frame = +1 / +3
Query: 718 VNCGLSFGDWMAPDKPNPNELTGAIVGGPDKNDGFVDKRGNSSYTEPCTYINSLAIGP 891
+ C F + PNPN LTGAIVGGP++NDG+ DKR + S++EP TYIN+ +GP
Sbjct: 429 IGCDSGFEPFFHSANPNPNILTGAIVGGPNQNDGYPDKRSDYSHSEPATYINAAMVGP 602
>gb|CX658587.1|CX658587 PO01036G06 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO01036G06 5', mRNA sequence
Length = 735
Score = 122 bits (260), Expect(3) = 3e-043
Identities = 53/130 (40%), Positives = 75/130 (57%)
Frame = +1 / +2
Query: 307 VLLAEFNMTSAGGAQNFKSQADNFVCAVLPDTAFHQVFITPGGVIHLRDGANSQYVTSTA 486
+L EF + Q +KS +DN++C+++P ++ Q TPGG+ + +N QYVTST
Sbjct: 86 LLSKEFLDKTTEEFQIYKSHSDNYICSLMPGSSSFQAQYTPGGLFYKATESNLQYVTSTT 265
Query: 487 FLLVVYADLLLRTGQTVLCGNQPLPPARLHEFARQQMDYLLGANPRHSSYVVGFGANPPT 666
FLL+ YA L G CG + L A++Q+DY+LG NP SY+VGFG P
Sbjct: 266 FLLLTYAKYLGSNGGVAKCGGSTVTAESLIAQAKKQVDYILGDNPAKMSYMVGFGNKYPQ 445
Query: 667 QPHHRGASTP 696
HHRG+S P
Sbjct: 446 HVHHRGSSVP 475
Score = 65.7 bits (137), Expect(3) = 3e-043
Identities = 26/56 (46%), Positives = 33/56 (58%)
Frame = +1 / +2
Query: 745 WMAPDKPNPNELTGAIVGGPDKNDGFVDKRGNSSYTEPCTYINSLAIGPLAALAVR 912
++ PNPN L GAIVGGPD D F D R N +EP YIN+ +G LA + +
Sbjct: 524 YLYSSSPNPNVLVGAIVGGPDNRDHFADDRNNYQQSEPAIYINAPFVGALAFFSAK 691
Score = 26.7 bits (52), Expect(3) = 3e-043
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = +1 / +2
Query: 274 FSWDLKFPGAQVLLAE 321
FSWD K PG ++LL++
Sbjct: 50 FSWDDKRPGTKILLSK 97
>gb|DT519386.1|DT519386 WS02441.B21_F23 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02441_F23 3', mRNA sequence
Length = 830
Score = 120 bits (256), Expect(5) = 2e-042
Identities = 50/118 (42%), Positives = 73/118 (61%)
Frame = +1 / +3
Query: 349 QNFKSQADNFVCAVLPDTAFHQVFITPGGVIHLRDGANSQYVTSTAFLLVVYADLLLRTG 528
+ F+ +A++F+C +LP++ + T GG+++ +N QYVTS FLL YA + T
Sbjct: 378 EQFEGEAESFMCRILPNSPYKTTQYTQGGLMYKLPESNLQYVTSITFLLTTYAKYMKATR 557
Query: 529 QTVLCGNQPLPPARLHEFARQQMDYLLGANPRHSSYVVGFGANPPTQPHHRGASTPVL 702
T CGN + P L A++Q+DY+LG NP SY+VGFG N P + HHRG+S P L
Sbjct: 558 HTFNCGNLLVTPNSLLYVAKRQVDYILGENPIRMSYMVGFGPNFPKRIHHRGSSLPSL 731
Score = 38.2 bits (77), Expect(5) = 2e-042
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +1 / +3
Query: 139 CPFYCSYSGYNDE 177
CPFYCSYSGY DE
Sbjct: 165 CPFYCSYSGYKDE 203
Score = 32.2 bits (64), Expect(5) = 2e-042
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +1 / +3
Query: 718 VNCGLSFGDWMAPDKPNPNELTGAIVG 798
+ C F + PNPN LTGAIVG
Sbjct: 750 IGCDSGFEPFFHSANPNPNILTGAIVG 830
Score = 30.9 bits (61), Expect(5) = 2e-042
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +1 / +3
Query: 52 DKKYSRKLLNKAKLLFTFAKSHLGSY 129
D+KYS LL A+ +F FA + G+Y
Sbjct: 63 DRKYSALLLRTARKVFQFAMQYQGAY 140
Score = 25.8 bits (50), Expect(5) = 2e-042
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = +1 / +3
Query: 274 FSWDLKFPGAQVLLA 318
FSWD K+ G VLL+
Sbjct: 300 FSWDNKYAGVHVLLS 344
>gb|CX657483.1|CX657483 PO02048A07 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO02048A07 5', mRNA sequence
Length = 594
Score = 123 bits (263), Expect(2) = 7e-042
Identities = 50/114 (43%), Positives = 69/114 (60%)
Frame = +1 / +1
Query: 355 FKSQADNFVCAVLPDTAFHQVFITPGGVIHLRDGANSQYVTSTAFLLVVYADLLLRTGQT 534
+KS +DN++C+++P T+ Q TPGG+ + +N QYVTST FLL+ YA L G
Sbjct: 4 YKSHSDNYICSLIPGTSSFQAQYTPGGLFYKASESNLQYVTSTTFLLLTYAKYLGSNGGV 183
Query: 535 VLCGNQPLPPARLHEFARQQMDYLLGANPRHSSYVVGFGANPPTQPHHRGASTP 696
CG + L A++Q+DY+LG NP SY+VGFG P HHRG+S P
Sbjct: 184 ARCGGSTVTAESLIAQAKKQVDYILGDNPARMSYMVGFGNRYPQHVHHRGSSVP 345
Score = 68.4 bits (143), Expect(2) = 7e-042
Identities = 27/53 (50%), Positives = 33/53 (62%)
Frame = +1 / +1
Query: 763 PNPNELTGAIVGGPDKNDGFVDKRGNSSYTEPCTYINSLAIGPLAALAVRGVQ 921
PNPN L GAI+GGPD D F D R N +EP TYIN+ +G LA + + Q
Sbjct: 412 PNPNVLVGAIIGGPDNRDXFADDRNNYQQSEPATYINAPFVGALAFFSAKN*Q 570
>dbj|AB049200.1| Populus alba PopCel2 gene for endo-1,4-beta-glucanase, complete cds
Length = 4603
Score = 92.3 bits (195), Expect(4) = 3e-041
Identities = 40/89 (44%), Positives = 51/89 (57%)
Frame = +1 / +3
Query: 430 GGVIHLRDGANSQYVTSTAFLLVVYADLLLRTGQTVLCGNQPLPPARLHEFARQQMDYLL 609
GG+ + +N QYVTST FLL+ YA L G CG + L A++Q+DY+L
Sbjct: 3927 GGLFYKATESNLQYVTSTTFLLLTYAKYLGSNGGVAKCGGSTVTAESLIAQAKKQVDYIL 4106
Query: 610 GANPRHSSYVVGFGANPPTQPHHRGASTP 696
G NP SY+VGFG P HHRG+S P
Sbjct: 4107 GDNPAKMSYMVGFGNKYPQHVHHRGSSVP 4193
Score = 68.4 bits (143), Expect(4) = 3e-041
Identities = 27/56 (48%), Positives = 34/56 (60%)
Frame = +1 / +3
Query: 745 WMAPDKPNPNELTGAIVGGPDKNDGFVDKRGNSSYTEPCTYINSLAIGPLAALAVR 912
++ PNPN L GAIVGGPD D F D R N +EP TYIN+ +G LA + +
Sbjct: 4242 YLYSSSPNPNVLVGAIVGGPDNRDHFADDRNNYQQSEPATYINAPFVGALAFFSAK 4409
Score = 38.2 bits (77), Expect(4) = 3e-041
Identities = 15/43 (34%), Positives = 26/43 (60%)
Frame = +1 / +2
Query: 307 VLLAEFNMTSAGGAQNFKSQADNFVCAVLPDTAFHQVFITPGG 435
V+ EF + Q +KS +DN++C+++P ++ Q TPGG
Sbjct: 3719 VVQQEFLDKTTEEFQIYKSHSDNYICSLMPGSSSFQAQYTPGG 3847
Score = 26.7 bits (52), Expect(4) = 3e-041
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = +1 / +3
Query: 274 FSWDLKFPGAQVLLAE 321
FSWD K PG ++LL++
Sbjct: 3603 FSWDDKRPGTKILLSK 3650
>dbj|AB049199.1| Populus alba PopCel1 gene for endo-1,4-beta glucanase, complete cds
Length = 4247
Score = 93.2 bits (197), Expect(4) = 4e-041
Identities = 40/89 (44%), Positives = 51/89 (57%)
Frame = +1 / +1
Query: 430 GGVIHLRDGANSQYVTSTAFLLVVYADLLLRTGQTVLCGNQPLPPARLHEFARQQMDYLL 609
GG+ + +N QYVTST FLL+ YA L G CG + L A++Q+DY+L
Sbjct: 3685 GGLFYKASESNLQYVTSTTFLLLTYAKYLGSNGGVARCGGSTVTTESLIAQAKKQVDYIL 3864
Query: 610 GANPRHSSYVVGFGANPPTQPHHRGASTP 696
G NP SY+VGFG P HHRG+S P
Sbjct: 3865 GDNPARMSYMVGFGNRYPQHVHHRGSSVP 3951
Score = 68.4 bits (143), Expect(4) = 4e-041
Identities = 26/50 (52%), Positives = 32/50 (64%)
Frame = +1 / +1
Query: 763 PNPNELTGAIVGGPDKNDGFVDKRGNSSYTEPCTYINSLAIGPLAALAVR 912
PNPN L GAI+GGPD D F D R N +EP TYIN+ +G LA + +
Sbjct: 4018 PNPNVLVGAIIGGPDNRDNFADDRNNYQQSEPATYINAPFVGALAFFSAK 4167
Score = 36.8 bits (74), Expect(4) = 4e-041
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = +1 / +3
Query: 349 QNFKSQADNFVCAVLPDTAFHQVFITPG 432
Q +KS +DN++C+++P T+ Q TPG
Sbjct: 3519 QLYKSHSDNYICSLIPGTSSFQAQYTPG 3602
Score = 26.7 bits (52), Expect(4) = 4e-041
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = +1 / +1
Query: 274 FSWDLKFPGAQVLLAE 321
FSWD K PG ++LL++
Sbjct: 3358 FSWDDKRPGTKILLSK 3405
>gb|CV270742.1|CV270742 WS0152.B21_M22 PTxN-IB-A-6 Populus trichocarpa x Populus nigra cDNA
clone WS0152_M22 3', mRNA sequence
Length = 904
Score = 77.6 bits (163), Expect(4) = 4e-041
Identities = 34/81 (41%), Positives = 50/81 (61%)
Frame = +1 / -1
Query: 355 FKSQADNFVCAVLPDTAFHQVFITPGGVIHLRDGANSQYVTSTAFLLVVYADLLLRTGQT 534
F AD FVC VLP++ V +PGG++ G+N Q+ T+ +FLL+ YA L ++ +
Sbjct: 775 FIPNADKFVCTVLPESPTVYVSYSPGGLLFKPGGSNLQHATALSFLLLAYARYLNQSNRE 596
Query: 535 VLCGNQPLPPARLHEFARQQM 597
+ CGN PARL +FAR Q+
Sbjct: 595 IHCGNVVATPARLIQFARGQV 533
Score = 66.6 bits (139), Expect(4) = 4e-041
Identities = 26/45 (57%), Positives = 32/45 (71%)
Frame = +1 / -2
Query: 763 PNPNELTGAIVGGPDKNDGFVDKRGNSSYTEPCTYINSLAIGPLA 897
PNPN L GA+VGGPDK D + D R + +TEP TYIN+ +G LA
Sbjct: 267 PNPNLLIGAVVGGPDKGDSYSDSRADFVHTEPTTYINAPLVGLLA 133
Score = 53.3 bits (110), Expect(4) = 4e-041
Identities = 19/35 (54%), Positives = 26/35 (74%)
Frame = +1 / -2
Query: 592 QMDYLLGANPRHSSYVVGFGANPPTQPHHRGASTP 696
Q+DY+LG NP SY+VG+G+ P + HHRG+S P
Sbjct: 438 QVDYILGTNPLKMSYMVGYGSKFPRKIHHRGSSLP 334
Score = 27.6 bits (54), Expect(4) = 4e-041
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +1 / -1
Query: 262 SVAEFSWDLKFPGAQVLLAEFNMTS 336
S AEF WD K G +L+++ ++S
Sbjct: 871 SFAEFGWDTKNAGINILVSKLLLSS 797
>gb|CK087641.1|CK087641 A016P51.3pR Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA clone A016P51 3', mRNA sequence
Length = 835
Score = 98.2 bits (208), Expect(3) = 4e-040
Identities = 44/93 (47%), Positives = 57/93 (61%)
Frame = +1 / -3
Query: 424 TPGGVIHLRDGANSQYVTSTAFLLVVYADLLLRTGQTVLCGNQPLPPARLHEFARQQMDY 603
T GG+++ +N QYVTS FLL YA + T T CGN + P L A++Q+DY
Sbjct: 668 TQGGLMYKLPESNLQYVTSITFLLTTYAKYMKATRHTFNCGNLLVTPNSLLYVAKRQVDY 489
Query: 604 LLGANPRHSSYVVGFGANPPTQPHHRGASTPVL 702
+LG NP SY+VGFG N P + HHRG+S P L
Sbjct: 488 ILGENPIIMSYMVGFGPNFPKRIHHRGSSLPSL 390
Score = 83.1 bits (175), Expect(3) = 4e-040
Identities = 32/63 (50%), Positives = 43/63 (68%)
Frame = +1 / -3
Query: 718 VNCGLSFGDWMAPDKPNPNELTGAIVGGPDKNDGFVDKRGNSSYTEPCTYINSLAIGPLA 897
+ C F + PNPN LTGAIVGGP++NDG+ D+R + S++EP TYIN+ +GPLA
Sbjct: 371 IGCDSGFEPFFHSANPNPNILTGAIVGGPNQNDGYPDERSDYSHSEPATYINAAMVGPLA 192
Query: 898 ALA 906
A
Sbjct: 191 YFA 183
Score = 22.6 bits (43), Expect(3) = 4e-040
Identities = 5/17 (29%), Positives = 14/17 (82%)
Frame = +1 / -1
Query: 358 KSQADNFVCAVLPDTAF 408
+ +A++F+C +LP++ +
Sbjct: 733 EGEAESFMCRILPNSPY 683
>gb|DT525548.1|DT525548 WS02045.C21_K07 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02045_K07 3', mRNA sequence
Length = 897
Score = 128 bits (275), Expect(2) = 3e-039
Identities = 51/116 (43%), Positives = 75/116 (64%)
Frame = +1 / -3
Query: 349 QNFKSQADNFVCAVLPDTAFHQVFITPGGVIHLRDGANSQYVTSTAFLLVVYADLLLRTG 528
++FK AD+F+C++LP + QV +PGG+I G+N Q+VTS +FLL+ Y+ L
Sbjct: 817 ESFKQNADDFICSILPGISHPQVQYSPGGLIFKAGGSNMQHVTSLSFLLLAYSSYLSHAN 638
Query: 529 QTVLCGNQPLPPARLHEFARQQMDYLLGANPRHSSYVVGFGANPPTQPHHRGASTP 696
+ V CG PA L + A++Q+DY+LG NP SY+VG+G P + HHRG+S P
Sbjct: 637 KVVPCGETTASPALLKQLAKRQVDYILGDNPLGMSYMVGYGPRYPLRIHHRGSSLP 470
Score = 54.2 bits (112), Expect(2) = 3e-039
Identities = 23/45 (51%), Positives = 28/45 (62%)
Frame = +1 / -3
Query: 763 PNPNELTGAIVGGPDKNDGFVDKRGNSSYTEPCTYINSLAIGPLA 897
PNPN GA+VGGP+ D F D R +EP TYIN+ +G LA
Sbjct: 403 PNPNVHVGAVVGGPNITDAFPDSRPFFQESEPTTYINAPLVGLLA 269
>gb|DT513650.1|DT513650 WS02422.B21_K01 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02422_K01 3', mRNA sequence
Length = 888
Score = 128 bits (275), Expect(2) = 3e-039
Identities = 51/116 (43%), Positives = 75/116 (64%)
Frame = +1 / -1
Query: 349 QNFKSQADNFVCAVLPDTAFHQVFITPGGVIHLRDGANSQYVTSTAFLLVVYADLLLRTG 528
++FK AD+F+C++LP + QV +PGG+I G+N Q+VTS +FLL+ Y+ L
Sbjct: 711 ESFKQNADDFICSILPGISHPQVQYSPGGLIFKAGGSNMQHVTSLSFLLLAYSSYLSHAN 532
Query: 529 QTVLCGNQPLPPARLHEFARQQMDYLLGANPRHSSYVVGFGANPPTQPHHRGASTP 696
+ V CG PA L + A++Q+DY+LG NP SY+VG+G P + HHRG+S P
Sbjct: 531 KVVPCGETTASPALLKQLAKRQVDYILGDNPLGMSYMVGYGPRYPLRIHHRGSSLP 364
Score = 54.2 bits (112), Expect(2) = 3e-039
Identities = 23/45 (51%), Positives = 28/45 (62%)
Frame = +1 / -1
Query: 763 PNPNELTGAIVGGPDKNDGFVDKRGNSSYTEPCTYINSLAIGPLA 897
PNPN GA+VGGP+ D F D R +EP TYIN+ +G LA
Sbjct: 297 PNPNVHVGAVVGGPNITDAFPDSRPFFQESEPTTYINAPLVGLLA 163
>gb|CX655743.1|CX655743 PO02039D08 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO02039D08 5', mRNA sequence
Length = 581
Score = 117 bits (251), Expect(2) = 3e-038
Identities = 50/118 (42%), Positives = 73/118 (61%)
Frame = +1 / +3
Query: 349 QNFKSQADNFVCAVLPDTAFHQVFITPGGVIHLRDGANSQYVTSTAFLLVVYADLLLRTG 528
+ F+++A++F+C +LP++ + T GG+++ N QYVTS FLL YA + T
Sbjct: 69 EQFEAEAESFMCRILPNSPYKTTQYTQGGLMYKLPENNLQYVTSITFLLNTYAKYMKATR 248
Query: 529 QTVLCGNQPLPPARLHEFARQQMDYLLGANPRHSSYVVGFGANPPTQPHHRGASTPVL 702
T CGN + P L A++Q+DY+LG NP SY+VGFG N P + HHRG+S P L
Sbjct: 249 HTFNCGNLLVTPNSLLYVAKRQVDYILGENPIRMSYMVGFGPNFPKRIHHRGSSLPSL 422
Score = 61.6 bits (128), Expect(2) = 3e-038
Identities = 23/47 (48%), Positives = 32/47 (68%)
Frame = +1 / +3
Query: 718 VNCGLSFGDWMAPDKPNPNELTGAIVGGPDKNDGFVDKRGNSSYTEP 858
+ C F + PNPN LTGAIVGGP++NDG+ D+R + S++EP
Sbjct: 441 IGCDSGFEPFFHSANPNPNILTGAIVGGPNQNDGYPDERSDYSHSEP 581
>gb|CA930454.1|CA930454 MTU4CA.P22.G09 Aspen apex cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 585
Score = 120 bits (257), Expect(2) = 8e-038
Identities = 48/113 (42%), Positives = 76/113 (67%)
Frame = +1 / +1
Query: 358 KSQADNFVCAVLPDTAFHQVFITPGGVIHLRDGANSQYVTSTAFLLVVYADLLLRTGQTV 537
K+ AD+F+C ++P+++ + +PGG+I+ G+N Q+ T+ +FLLV YA+ L RT Q V
Sbjct: 1 KASADSFMCTLIPESSSSHIEYSPGGLIYKPGGSNLQHATTISFLLVSYANYLERTSQAV 180
Query: 538 LCGNQPLPPARLHEFARQQMDYLLGANPRHSSYVVGFGANPPTQPHHRGASTP 696
CG+ + P L + A++Q+DY+LG NP SY+VG+ P + HHRG+S P
Sbjct: 181 NCGDVNVGPYSLRQQAKRQVDYILGDNPMGLSYMVGYSDRYPQRIHHRGSSLP 339
Score = 57.4 bits (119), Expect(2) = 8e-038
Identities = 24/48 (50%), Positives = 31/48 (64%)
Frame = +1 / +1
Query: 763 PNPNELTGAIVGGPDKNDGFVDKRGNSSYTEPCTYINSLAIGPLAALA 906
PNPN GAIVGGP ++D + D R + +EP TYIN+ +G LA A
Sbjct: 406 PNPNVHVGAIVGGPSQDDSYDDNRDDFRKSEPTTYINAPFVGVLAYFA 549
>gb|CX657081.1|CX657081 PO02059C06 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO02059C06 5', mRNA sequence
Length = 637
Score = 115 bits (246), Expect(3) = 9e-038
Identities = 49/118 (41%), Positives = 72/118 (61%)
Frame = +1 / +1
Query: 349 QNFKSQADNFVCAVLPDTAFHQVFITPGGVIHLRDGANSQYVTSTAFLLVVYADLLLRTG 528
+ F+++A++F+C +LP++ + T GG+++ N QYVTS FLL YA + T
Sbjct: 121 EQFEAEAESFMCRILPNSPYKTTQYTQGGLMYKLPENNLQYVTSITFLLTTYAKYMKATR 300
Query: 529 QTVLCGNQPLPPARLHEFARQQMDYLLGANPRHSSYVVGFGANPPTQPHHRGASTPVL 702
T CGN + P L A++Q+DY+LG NP S +VGFG N P + HHRG+S P L
Sbjct: 301 HTFNCGNLLVTPNSLLYVAKRQVDYILGENPIRMSXMVGFGPNFPKRIHHRGSSLPSL 474
Score = 54.7 bits (113), Expect(3) = 9e-038
Identities = 21/47 (44%), Positives = 30/47 (63%)
Frame = +1 / +1
Query: 718 VNCGLSFGDWMAPDKPNPNELTGAIVGGPDKNDGFVDKRGNSSYTEP 858
+ C F + PNP LTGAIVGGP +NDG+ D+R + +++EP
Sbjct: 493 IGCDSGFEPFFHSANPNP*ILTGAIVGGPHQNDGYPDERSDYTHSEP 633
Score = 25.8 bits (50), Expect(3) = 9e-038
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = +1 / +1
Query: 274 FSWDLKFPGAQVLLA 318
FSWD K+ G VLL+
Sbjct: 43 FSWDNKYAGVHVLLS 87
>gb|DV464578.1|DV464578 MTUNUL1.P29.C07 NUL Populus fremontii x Populus angustifolia cDNA,
mRNA sequence
Length = 764
Score = 105 bits (223), Expect(2) = 2e-037
Identities = 42/89 (47%), Positives = 60/89 (67%)
Frame = +1 / +3
Query: 424 TPGGVIHLRDGANSQYVTSTAFLLVVYADLLLRTGQTVLCGNQPLPPARLHEFARQQMDY 603
TPGG+I+ + N Q+VT +FL VY+D L G+ + C + P++L FA+ Q+DY
Sbjct: 24 TPGGLIYRQRWNNMQFVTGASFLAAVYSDYLASAGRNLNCAAGNVAPSQLLTFAKSQVDY 203
Query: 604 LLGANPRHSSYVVGFGANPPTQPHHRGAS 690
+LG NPR +SY+VG+G N P Q HHRG+S
Sbjct: 204 ILGDNPRATSYMVGYGNNYPRQVHHRGSS 290
Score = 71.6 bits (150), Expect(2) = 2e-037
Identities = 31/65 (47%), Positives = 39/65 (60%)
Frame = +1 / +3
Query: 712 TDVNCGLSFGDWMAPDKPNPNELTGAIVGGPDKNDGFVDKRGNSSYTEPCTYINSLAIGP 891
T V+C + W + +PN LTGAIVGGPD D F D+R N TEP TY N+ +G
Sbjct: 315 TFVSCRGGYATWFSRKGSDPNLLTGAIVGGPDAYDNFADERDNYEQTEPATYNNAPLLGL 494
Query: 892 LAALA 906
LA L+
Sbjct: 495 LARLS 509
>gb|DT508178.1|DT508178 WS02420.BR_E10 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02420_E10 5', mRNA sequence
Length = 725
Score = 93.6 bits (198), Expect(2) = 2e-037
Identities = 41/82 (50%), Positives = 51/82 (62%)
Frame = +1 / +2
Query: 457 ANSQYVTSTAFLLVVYADLLLRTGQTVLCGNQPLPPARLHEFARQQMDYLLGANPRHSSY 636
+N QYVTS FLL YA + T T CGN + P L A++Q+DY+LG NP SY
Sbjct: 23 SNLQYVTSITFLLTTYAKYMKATRHTFNCGNLLVTPNSLLYVAKRQVDYILGENPIRMSY 202
Query: 637 VVGFGANPPTQPHHRGASTPVL 702
+VGFG N P + HHRG+S P L
Sbjct: 203 MVGFGPNFPKRIHHRGSSLPSL 268
Score = 83.1 bits (175), Expect(2) = 2e-037
Identities = 32/63 (50%), Positives = 43/63 (68%)
Frame = +1 / +2
Query: 718 VNCGLSFGDWMAPDKPNPNELTGAIVGGPDKNDGFVDKRGNSSYTEPCTYINSLAIGPLA 897
+ C F + PNPN LTGAIVGGP++NDG+ D+R + S++EP TYIN+ +GPLA
Sbjct: 287 IGCDSGFEPFFHSANPNPNILTGAIVGGPNQNDGYPDERSDYSHSEPATYINAAMVGPLA 466
Query: 898 ALA 906
A
Sbjct: 467 YFA 475
>gb|DT512795.1|DT512795 WS02420.B21_E10 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02420_E10 3', mRNA sequence
Length = 725
Score = 93.6 bits (198), Expect(2) = 2e-037
Identities = 41/82 (50%), Positives = 51/82 (62%)
Frame = +1 / -2
Query: 457 ANSQYVTSTAFLLVVYADLLLRTGQTVLCGNQPLPPARLHEFARQQMDYLLGANPRHSSY 636
+N QYVTS FLL YA + T T CGN + P L A++Q+DY+LG NP SY
Sbjct: 703 SNLQYVTSITFLLTTYAKYMKATRHTFNCGNLLVTPNSLLYVAKRQVDYILGENPIRMSY 524
Query: 637 VVGFGANPPTQPHHRGASTPVL 702
+VGFG N P + HHRG+S P L
Sbjct: 523 MVGFGPNFPKRIHHRGSSLPSL 458
Score = 83.1 bits (175), Expect(2) = 2e-037
Identities = 32/63 (50%), Positives = 43/63 (68%)
Frame = +1 / -2
Query: 718 VNCGLSFGDWMAPDKPNPNELTGAIVGGPDKNDGFVDKRGNSSYTEPCTYINSLAIGPLA 897
+ C F + PNPN LTGAIVGGP++NDG+ D+R + S++EP TYIN+ +GPLA
Sbjct: 439 IGCDSGFEPFFHSANPNPNILTGAIVGGPNQNDGYPDERSDYSHSEPATYINAAMVGPLA 260
Query: 898 ALA 906
A
Sbjct: 259 YFA 251
>gb|CV227953.1|CV227953 WS0168.B21_K23 PT-DX-A-7 Populus trichocarpa cDNA clone WS0168_K23
3', mRNA sequence
Length = 714
Score = 93.6 bits (198), Expect(2) = 3e-036
Identities = 41/82 (50%), Positives = 51/82 (62%)
Frame = +1 / -3
Query: 457 ANSQYVTSTAFLLVVYADLLLRTGQTVLCGNQPLPPARLHEFARQQMDYLLGANPRHSSY 636
+N QYVTS FLL YA + T T CGN + P L A++Q+DY+LG NP SY
Sbjct: 700 SNLQYVTSITFLLTTYAKYMKATRHTFNCGNLLVTPNSLLYVAKRQVDYILGENPIRMSY 521
Query: 637 VVGFGANPPTQPHHRGASTPVL 702
+VGFG N P + HHRG+S P L
Sbjct: 520 MVGFGPNFPKRIHHRGSSLPSL 455
Score = 79.4 bits (167), Expect(2) = 3e-036
Identities = 31/63 (49%), Positives = 42/63 (66%)
Frame = +1 / -3
Query: 718 VNCGLSFGDWMAPDKPNPNELTGAIVGGPDKNDGFVDKRGNSSYTEPCTYINSLAIGPLA 897
+ C F + PNPN LTGAIVGGP++NDG+ D+R + S++EP TYIN+ + PLA
Sbjct: 436 IGCDSGFEPFFHSANPNPNILTGAIVGGPNQNDGYPDERSDYSHSEPATYINAAMVEPLA 257
Query: 898 ALA 906
A
Sbjct: 256 YFA 248
>gb|CN518303.1|CN518303 GQ0091.B3_F12 GQ009 Populus trichocarpa x Populus deltoides cDNA
clone GQ0091_F12 5', mRNA sequence
Length = 506
Score = 93.6 bits (198), Expect(2) = 1e-034
Identities = 41/82 (50%), Positives = 51/82 (62%)
Frame = +1 / +1
Query: 457 ANSQYVTSTAFLLVVYADLLLRTGQTVLCGNQPLPPARLHEFARQQMDYLLGANPRHSSY 636
+N QYVTS FLL YA + T T CGN + P L A++Q+DY+LG NP SY
Sbjct: 1 SNLQYVTSITFLLTTYAKYMKATRHTFNCGNLLVTPNSLLYVAKRQVDYILGENPIRMSY 180
Query: 637 VVGFGANPPTQPHHRGASTPVL 702
+VGFG N P + HHRG+S P L
Sbjct: 181 MVGFGPNFPKRIHHRGSSLPSL 246
Score = 73.9 bits (155), Expect(2) = 1e-034
Identities = 30/63 (47%), Positives = 40/63 (63%)
Frame = +1 / +1
Query: 718 VNCGLSFGDWMAPDKPNPNELTGAIVGGPDKNDGFVDKRGNSSYTEPCTYINSLAIGPLA 897
+ C F + PNPN LTGAIVGGP++NDG+ D+R + S++EP TYIN+ LA
Sbjct: 265 IGCDSGFEPFFHSANPNPNILTGAIVGGPNQNDGYPDERSDYSHSEPATYINAAMXXXLA 444
Query: 898 ALA 906
A
Sbjct: 445 YFA 453
>gb|CA925970.1|CA925970 MTU7TL.P8.D02 Aspen leaf cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 689
Score = 91.3 bits (193), Expect(4) = 8e-033
Identities = 40/89 (44%), Positives = 50/89 (56%)
Frame = +1 / +2
Query: 430 GGVIHLRDGANSQYVTSTAFLLVVYADLLLRTGQTVLCGNQPLPPARLHEFARQQMDYLL 609
GG + +N QYVTST FLL+ YA L G CG + L A++Q+DY+L
Sbjct: 287 GGFFYKATESNLQYVTSTTFLLLTYAKYLGSNGGVAKCGGSTVTAESLIAQAKKQVDYIL 466
Query: 610 GANPRHSSYVVGFGANPPTQPHHRGASTP 696
G NP SY+VGFG P HHRG+S P
Sbjct: 467 GDNPAKMSYMVGFGNKYPQHVHHRGSSVP 553
Score = 40.0 bits (81), Expect(4) = 8e-033
Identities = 15/28 (53%), Positives = 17/28 (60%)
Frame = +1 / +2
Query: 745 WMAPDKPNPNELTGAIVGGPDKNDGFVD 828
++ PNPN L GAIV GPD D F D
Sbjct: 602 YLYSSSPNPNVLVGAIVXGPDNRDHFAD 685
Score = 38.6 bits (78), Expect(4) = 8e-033
Identities = 15/44 (34%), Positives = 27/44 (61%)
Frame = +1 / +1
Query: 307 VLLAEFNMTSAGGAQNFKSQADNFVCAVLPDTAFHQVFITPGGV 438
+L EF + Q +KS +DN++C+++P ++ Q TPGG+
Sbjct: 163 LLSKEFLDKTTEEFQIYKSHSDNYICSLIPGSSSFQAQYTPGGL 294
Score = 26.7 bits (52), Expect(4) = 8e-033
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = +1 / +1
Query: 274 FSWDLKFPGAQVLLAE 321
FSWD K PG ++LL++
Sbjct: 127 FSWDDKRPGTKILLSK 174
>gb|CX654603.1|CX654603 PO02018B07 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO02018B07 5', mRNA sequence
Length = 635
Score = 104 bits (221), Expect(4) = 2e-032
Identities = 47/115 (40%), Positives = 65/115 (56%)
Frame = +1 / +1
Query: 307 VLLAEFNMTSAGGAQNFKSQADNFVCAVLPDTAFHQVFITPGGVIHLRDGANSQYVTSTA 486
+L EF + Q +KS +DN++C+++P T+ Q TPGG + +N QYVTST
Sbjct: 283 LLSKEFLEKTTEEFQLYKSHSDNYICSLIPGTSSFQAQYTPGGFFYKASESNLQYVTSTT 462
Query: 487 FLLVVYADLLLRTGQTVLCGNQPLPPARLHEFARQQMDYLLGANPRHSSYVVGFG 651
FLL+ YA L G CG L A++Q+DY+LG NP SY+VGFG
Sbjct: 463 FLLLTYAKYLGSNGGVARCGGSTGTAESLIAQAKKQVDYILGDNPPRMSYMVGFG 627
Score = 38.2 bits (77), Expect(4) = 2e-032
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +1 / +1
Query: 139 CPFYCSYSGYNDE 177
CPFYCSYSGY DE
Sbjct: 100 CPFYCSYSGYQDE 138
Score = 28.1 bits (55), Expect(4) = 2e-032
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +1 / +1
Query: 61 YSRKLLNKAKLLFTFAKSHLGSY 129
YS KLL+ A +F FA + GSY
Sbjct: 7 YSTKLLHTAMKVFDFADRYRGSY 75
Score = 24.9 bits (48), Expect(4) = 2e-032
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = +1 / +1
Query: 274 FSWDLKFPGAQVLLAE 321
F WD K PG ++LL++
Sbjct: 247 FXWDDKRPGTKILLSK 294
>gb|CF119547.1|CF119547 MTU10CS.P3.C05 Aspen stem cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 423
Score = 93.6 bits (198), Expect(2) = 2e-031
Identities = 41/82 (50%), Positives = 51/82 (62%)
Frame = +1 / -1
Query: 457 ANSQYVTSTAFLLVVYADLLLRTGQTVLCGNQPLPPARLHEFARQQMDYLLGANPRHSSY 636
+N QYVTS FLL YA + T T CGN + P L A++Q+DY+LG NP SY
Sbjct: 411 SNLQYVTSITFLLTTYAKYMKATRHTFNCGNLLVTPNSLLYVAKRQVDYILGENPIRMSY 232
Query: 637 VVGFGANPPTQPHHRGASTPVL 702
+VGFG N P + HHRG+S P L
Sbjct: 231 MVGFGPNFPKRIHHRGSSLPSL 166
Score = 63.4 bits (132), Expect(2) = 2e-031
Identities = 24/49 (48%), Positives = 33/49 (67%)
Frame = +1 / -1
Query: 718 VNCGLSFGDWMAPDKPNPNELTGAIVGGPDKNDGFVDKRGNSSYTEPCT 864
+ C F + PNPN LTGAIVGGP++NDG+ D+R + S++EP T
Sbjct: 147 IGCDSGFEPFFHSVNPNPNILTGAIVGGPNQNDGYPDERSDYSHSEPAT 1
>gb|CF119849.1|CF119849 MTU10CS.P7.B01 Aspen stem cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 424
Score = 93.6 bits (198), Expect(2) = 2e-031
Identities = 41/82 (50%), Positives = 51/82 (62%)
Frame = +1 / -1
Query: 457 ANSQYVTSTAFLLVVYADLLLRTGQTVLCGNQPLPPARLHEFARQQMDYLLGANPRHSSY 636
+N QYVTS FLL YA + T T CGN + P L A++Q+DY+LG NP SY
Sbjct: 412 SNLQYVTSITFLLTTYAKYMKATRHTFNCGNLLVTPNSLLYVAKRQVDYILGENPIRMSY 233
Query: 637 VVGFGANPPTQPHHRGASTPVL 702
+VGFG N P + HHRG+S P L
Sbjct: 232 MVGFGPNFPKRIHHRGSSLPSL 167
Score = 63.4 bits (132), Expect(2) = 2e-031
Identities = 24/49 (48%), Positives = 33/49 (67%)
Frame = +1 / -1
Query: 718 VNCGLSFGDWMAPDKPNPNELTGAIVGGPDKNDGFVDKRGNSSYTEPCT 864
+ C F + PNPN LTGAIVGGP++NDG+ D+R + S++EP T
Sbjct: 148 IGCDSGFEPFFHSVNPNPNILTGAIVGGPNQNDGYPDERSDYSHSEPAT 2
>gb|CX655130.1|CX655130 PO02030C08 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO02030C08 5', mRNA sequence
Length = 644
Score = 88.1 bits (186), Expect(2) = 2e-031
Identities = 38/80 (47%), Positives = 47/80 (58%)
Frame = +1 / +1
Query: 457 ANSQYVTSTAFLLVVYADLLLRTGQTVLCGNQPLPPARLHEFARQQMDYLLGANPRHSSY 636
+N QYVTST FLL+ YA L G CG + L A++Q+DY+LG NP SY
Sbjct: 22 SNLQYVTSTTFLLLTYAKYLGSNGGVAKCGGSTVTAESLIAQAKKQVDYILGDNPAKMSY 201
Query: 637 VVGFGANPPTQPHHRGASTP 696
+VGFG P HHRG+S P
Sbjct: 202 MVGFGNKYPQHVHHRGSSVP 261
Score = 68.4 bits (143), Expect(2) = 2e-031
Identities = 27/56 (48%), Positives = 34/56 (60%)
Frame = +1 / +2
Query: 745 WMAPDKPNPNELTGAIVGGPDKNDGFVDKRGNSSYTEPCTYINSLAIGPLAALAVR 912
++ PNPN L GAIVGGPD D F D R N +EP TYIN+ +G LA + +
Sbjct: 311 YLYSSSPNPNVLVGAIVGGPDNRDHFADDRNNYQQSEPATYINAPFVGALAFFSAK 478
>gb|CX654407.1|CX654407 PO02004C07 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO02004C07 5', mRNA sequence
Length = 638
Score = 88.1 bits (186), Expect(2) = 2e-031
Identities = 38/80 (47%), Positives = 47/80 (58%)
Frame = +1 / +1
Query: 457 ANSQYVTSTAFLLVVYADLLLRTGQTVLCGNQPLPPARLHEFARQQMDYLLGANPRHSSY 636
+N QYVTST FLL+ YA L G CG + L A++Q+DY+LG NP SY
Sbjct: 22 SNLQYVTSTTFLLLTYAKYLGSNGGVAKCGGSTVTAESLIAQAKKQVDYILGDNPAKMSY 201
Query: 637 VVGFGANPPTQPHHRGASTP 696
+VGFG P HHRG+S P
Sbjct: 202 MVGFGNKYPQHVHHRGSSVP 261
Score = 68.4 bits (143), Expect(2) = 2e-031
Identities = 27/56 (48%), Positives = 34/56 (60%)
Frame = +1 / +1
Query: 745 WMAPDKPNPNELTGAIVGGPDKNDGFVDKRGNSSYTEPCTYINSLAIGPLAALAVR 912
++ PNPN L GAIVGGPD D F D R N +EP TYIN+ +G LA + +
Sbjct: 310 YLYSSSPNPNVLVGAIVGGPDNRDHFADDRNNYQQSEPATYINAPFVGALAFFSAK 477
>gb|DT475971.1|DT475971 WS0128.BR_N04 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS0128_N04 5', mRNA sequence
Length = 430
Score = 90.4 bits (191), Expect(2) = 3e-031
Identities = 36/75 (48%), Positives = 51/75 (68%)
Frame = +1 / +1
Query: 466 QYVTSTAFLLVVYADLLLRTGQTVLCGNQPLPPARLHEFARQQMDYLLGANPRHSSYVVG 645
Q+VT +FL VY+D L G+ + C + P++L FA+ Q+DY+LG NPR +SY+VG
Sbjct: 7 QFVTGASFLGAVYSDYLASAGRNLNCAAGNVAPSQLLTFAKSQVDYILGDNPRATSYMVG 186
Query: 646 FGANPPTQPHHRGAS 690
+G N P Q HHRG+S
Sbjct: 187 YGNNYPRQVHHRGSS 231
Score = 65.7 bits (137), Expect(2) = 3e-031
Identities = 27/55 (49%), Positives = 33/55 (60%)
Frame = +1 / +1
Query: 712 TDVNCGLSFGDWMAPDKPNPNELTGAIVGGPDKNDGFVDKRGNSSYTEPCTYINS 876
T V+C + W + +PN LTGAIVGGPD D F D+R N TEP TY N+
Sbjct: 256 TFVSCRGGYATWFSRKGSDPNLLTGAIVGGPDAYDNFADERDNYEQTEPATYNNA 420
>gb|CX657138.1|CX657138 PO02030F03 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO02030F03 5', mRNA sequence
Length = 583
Score = 87.7 bits (185), Expect(2) = 4e-031
Identities = 38/79 (48%), Positives = 46/79 (58%)
Frame = +1 / +2
Query: 460 NSQYVTSTAFLLVVYADLLLRTGQTVLCGNQPLPPARLHEFARQQMDYLLGANPRHSSYV 639
N QYVTST FLL+ YA L G CG + L A++Q+DY+LG NP SY+
Sbjct: 2 NLQYVTSTTFLLLTYAKYLGSNGGVAKCGGSTVTAESLIAQAKKQVDYILGDNPAKMSYM 181
Query: 640 VGFGANPPTQPHHRGASTP 696
VGFG P HHRG+S P
Sbjct: 182 VGFGNKYPQHVHHRGSSVP 238
Score = 68.0 bits (142), Expect(2) = 4e-031
Identities = 27/56 (48%), Positives = 34/56 (60%)
Frame = +1 / +2
Query: 745 WMAPDKPNPNELTGAIVGGPDKNDGFVDKRGNSSYTEPCTYINSLAIGPLAALAVR 912
++ PNPN L GAIVGGPD D F D R N +EP TYIN+ +G LA + +
Sbjct: 287 YLYSSSPNPNVLVGAIVGGPDNRDHFADDRXNYQQSEPATYINAPFVGALAFFSAK 454
>gb|CF119223.1|CF119223 MTU10CS.P15.B01 Aspen stem cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 427
Score = 93.6 bits (198), Expect(2) = 8e-031
Identities = 41/82 (50%), Positives = 51/82 (62%)
Frame = +1 / -1
Query: 457 ANSQYVTSTAFLLVVYADLLLRTGQTVLCGNQPLPPARLHEFARQQMDYLLGANPRHSSY 636
+N QYVTS FLL YA + T T CGN + P L A++Q+DY+LG NP SY
Sbjct: 415 SNLQYVTSITFLLTTYAKYMKATRHTFNCGNLLVTPNSLLYVAKRQVDYILGENPIRMSY 236
Query: 637 VVGFGANPPTQPHHRGASTPVL 702
+VGFG N P + HHRG+S P L
Sbjct: 235 MVGFGPNFPKRIHHRGSSLPSL 170
Score = 61.1 bits (127), Expect(2) = 8e-031
Identities = 23/47 (48%), Positives = 32/47 (68%)
Frame = +1 / -1
Query: 718 VNCGLSFGDWMAPDKPNPNELTGAIVGGPDKNDGFVDKRGNSSYTEP 858
+ C F + PNPN LTGAIVGGP++NDG+ D+R + S++EP
Sbjct: 151 IGCDSGFEPFFHSVNPNPNILTGAIVGGPNQNDGYPDERSDYSHSEP 11
>gb|CX657360.1|CX657360 PO02043C07 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO02043C07 5', mRNA sequence
Length = 620
Score = 95.0 bits (201), Expect(4) = 8e-031
Identities = 40/101 (39%), Positives = 61/101 (60%)
Frame = +1 / +3
Query: 349 QNFKSQADNFVCAVLPDTAFHQVFITPGGVIHLRDGANSQYVTSTAFLLVVYADLLLRTG 528
+ F+++A++F+C +LP++ + T GG+++ N QYVTS FLL YA + T
Sbjct: 318 EQFEAEAESFMCRILPNSPYKTTQYTQGGLMYKLPENNLQYVTSITFLLTTYAKXMKATR 497
Query: 529 QTVLCGNQPLPPARLHEFARQQMDYLLGANPRHSSYVVGFG 651
T CGN + P L A++Q+DY+LG NP SY+V FG
Sbjct: 498 HTFNCGNLLVTPNSLLYVAKRQVDYILGENPIRMSYMVRFG 620
Score = 38.2 bits (77), Expect(4) = 8e-031
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +1 / +3
Query: 139 CPFYCSYSGYNDE 177
CPFYCSYSGY DE
Sbjct: 105 CPFYCSYSGYKDE 143
Score = 30.9 bits (61), Expect(4) = 8e-031
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +1 / +3
Query: 52 DKKYSRKLLNKAKLLFTFAKSHLGSY 129
D+KYS LL A+ +F FA + G+Y
Sbjct: 3 DRKYSALLLRTARKVFQFAMQYQGAY 80
Score = 25.8 bits (50), Expect(4) = 8e-031
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = +1 / +3
Query: 274 FSWDLKFPGAQVLLA 318
FSWD K+ G VLL+
Sbjct: 240 FSWDNKYAGVHVLLS 284
>gb|DT515655.1|DT515655 WS02429.B21.1_C15 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02429_C15 3', mRNA sequence
Length = 850
Score = 66.1 bits (138), Expect(3) = 1e-030
Identities = 26/53 (49%), Positives = 34/53 (64%)
Frame = +1 / -2
Query: 745 WMAPDKPNPNELTGAIVGGPDKNDGFVDKRGNSSYTEPCTYINSLAIGPLAAL 903
W+ +PNPN TGA+VGGP N+ FVD R NS EP TY ++ +G L+ L
Sbjct: 384 WLERKEPNPNVATGALVGGPFLNETFVDDRNNSMQAEPTTYNGAVIVGLLSGL 226
Score = 63.8 bits (133), Expect(3) = 1e-030
Identities = 25/52 (48%), Positives = 31/52 (59%)
Frame = +1 / -2
Query: 541 CGNQPLPPARLHEFARQQMDYLLGANPRHSSYVVGFGANPPTQPHHRGASTP 696
C P+ L +FA+ Q DY+LG NP S++VG G N P HHRGAS P
Sbjct: 576 CNGYSYKPSDLRKFAKSQADYVLGNNPMKMSFLVGHGENYPQYVHHRGASIP 421
Score = 41.8 bits (85), Expect(3) = 1e-030
Identities = 20/73 (27%), Positives = 38/73 (52%)
Frame = +1 / -2
Query: 331 TSAGGAQNFKSQADNFVCAVLPDTAFHQVFITPGGVIHLRDGANSQYVTSTAFLLVVYAD 510
TS G Q ++ A+ +C+++PD+ T G+I + + Q+ ++AFL +Y+D
Sbjct: 789 TSNSGLQMYRKTAEAVMCSLIPDSPTATQSRTDSGLIWVSEWNALQHPVASAFLASLYSD 610
Query: 511 LLLRTGQTVLCGN 549
+ +G L N
Sbjct: 609 YMRSSGTAKLSCN 571
>gb|CX655795.1|CX655795 PO02040B08 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO02040B08 5', mRNA sequence
Length = 460
Score = 123 bits (263), Expect(2) = 4e-030
Identities = 50/114 (43%), Positives = 69/114 (60%)
Frame = +1 / +1
Query: 355 FKSQADNFVCAVLPDTAFHQVFITPGGVIHLRDGANSQYVTSTAFLLVVYADLLLRTGQT 534
+KS +DN++C+++P T+ Q TPGG+ + +N QYVTST FLL+ YA L G
Sbjct: 4 YKSHSDNYICSLIPGTSSFQAQYTPGGLFYKASESNLQYVTSTTFLLLTYAKYLGSNGGV 183
Query: 535 VLCGNQPLPPARLHEFARQQMDYLLGANPRHSSYVVGFGANPPTQPHHRGASTP 696
CG + L A++Q+DY+LG NP SY+VGFG P HHRG+S P
Sbjct: 184 ARCGGSTVTAESLIAQAKKQVDYILGDNPARMSYMVGFGNRYPQHVHHRGSSVP 345
Score = 29.0 bits (57), Expect(2) = 4e-030
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +1 / +1
Query: 763 PNPNELTGAIVGGPD 807
PNPN L G I+ GPD
Sbjct: 412 PNPNVLVGPIIRGPD 456
>gb|BI129171.1|BI129171 G086P82Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 509
Score = 120 bits (257), Expect(2) = 2e-028
Identities = 50/118 (42%), Positives = 73/118 (61%)
Frame = +1 / +3
Query: 349 QNFKSQADNFVCAVLPDTAFHQVFITPGGVIHLRDGANSQYVTSTAFLLVVYADLLLRTG 528
+ F+ +A++F+C +LP++ + T GG+++ +N QYVTS FLL YA + T
Sbjct: 114 EQFEGEAESFMCRILPNSPYKTTQYTQGGLMYKLPESNLQYVTSITFLLTTYAKYMKATR 293
Query: 529 QTVLCGNQPLPPARLHEFARQQMDYLLGANPRHSSYVVGFGANPPTQPHHRGASTPVL 702
T CGN + P L A++Q+DY+LG NP SY+VGFG N P + HHRG+S P L
Sbjct: 294 HTFNCGNLLVTPNSLLYVAKRQVDYILGENPIRMSYMVGFGPNLPKRIHHRGSSLPSL 467
Score = 25.8 bits (50), Expect(2) = 2e-028
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = +1 / +3
Query: 274 FSWDLKFPGAQVLLA 318
FSWD K+ G VLL+
Sbjct: 36 FSWDNKYAGVHVLLS 80
>gb|CV245494.1|CV245494 WS0257.B21_J05 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS0257_J05 3', mRNA sequence
Length = 841
Score = 63.4 bits (132), Expect(3) = 2e-028
Identities = 25/53 (47%), Positives = 33/53 (62%)
Frame = +1 / -1
Query: 745 WMAPDKPNPNELTGAIVGGPDKNDGFVDKRGNSSYTEPCTYINSLAIGPLAAL 903
W+ +PNPN TGA+VGGP N+ FVD R NS EP Y ++ +G L+ L
Sbjct: 445 WLERKEPNPNVATGALVGGPFLNETFVDDRNNSMQAEPTPYNGAVIVGLLSGL 287
Score = 62.0 bits (129), Expect(3) = 2e-028
Identities = 24/52 (46%), Positives = 30/52 (57%)
Frame = +1 / -1
Query: 541 CGNQPLPPARLHEFARQQMDYLLGANPRHSSYVVGFGANPPTQPHHRGASTP 696
C P+ +FA+ Q DY+LG NP S++VG G N P HHRGAS P
Sbjct: 637 CNGYSYKPSDFRKFAKSQADYVLGNNPMKMSFLVGHGENYPQYVHHRGASIP 482
Score = 38.6 bits (78), Expect(3) = 2e-028
Identities = 18/69 (26%), Positives = 36/69 (52%)
Frame = +1 / -1
Query: 343 GAQNFKSQADNFVCAVLPDTAFHQVFITPGGVIHLRDGANSQYVTSTAFLLVVYADLLLR 522
G Q ++ A+ +C+++PD+ T G+I + + Q+ ++AFL +Y+D +
Sbjct: 838 GLQMYRKTAEAVMCSLIPDSPTATQSRTDSGLIWVSEWNALQHPVASAFLASLYSDYMRS 659
Query: 523 TGQTVLCGN 549
+G L N
Sbjct: 658 SGTAKLSCN 632
>gb|DT510953.1|DT510953 WS02429.BR_C15 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02429_C15 5', mRNA sequence
Length = 872
Score = 63.8 bits (133), Expect(5) = 6e-028
Identities = 25/52 (48%), Positives = 31/52 (59%)
Frame = +1 / +3
Query: 541 CGNQPLPPARLHEFARQQMDYLLGANPRHSSYVVGFGANPPTQPHHRGASTP 696
C P+ L +FA+ Q DY+LG NP S++VG G N P HHRGAS P
Sbjct: 633 CNGYSYKPSDLRKFAKSQADYVLGNNPMKMSFLVGHGENYPQYVHHRGASIP 788
Score = 45.1 bits (92), Expect(5) = 6e-028
Identities = 19/41 (46%), Positives = 24/41 (58%)
Frame = +1 / +3
Query: 37 MVFRDDKKYSRKLLNKAKLLFTFAKSHLGSYDGECPFYCSY 159
+VF+ D +YS LL AK LFTFA + GSY P +Y
Sbjct: 87 LVFKSDSRYSSALLKHAKELFTFADKYRGSYSESIPEVSTY 209
Score = 41.8 bits (85), Expect(5) = 6e-028
Identities = 20/73 (27%), Positives = 38/73 (52%)
Frame = +1 / +3
Query: 331 TSAGGAQNFKSQADNFVCAVLPDTAFHQVFITPGGVIHLRDGANSQYVTSTAFLLVVYAD 510
TS G Q ++ A+ +C+++PD+ T G+I + + Q+ ++AFL +Y+D
Sbjct: 420 TSNSGLQMYRKTAEAVMCSLIPDSPTATQSRTDSGLIWVSEWNALQHPVASAFLASLYSD 599
Query: 511 LLLRTGQTVLCGN 549
+ +G L N
Sbjct: 600 YMRSSGTAKLSCN 638
Score = 27.2 bits (53), Expect(5) = 6e-028
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = +1 / +3
Query: 262 SVAEFSWDLKFPGAQVLLA 318
S FSWD K G QVLL+
Sbjct: 336 SATWFSWDNKLAGTQVLLS 392
Score = 25.8 bits (50), Expect(5) = 6e-028
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +1 / +3
Query: 745 WMAPDKPNPNELTGAI 792
W+ +PNPN TGA+
Sbjct: 825 WLERKEPNPNVATGAL 872
>gb|BI129393.1|BI129393 G090P13Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 517
Score = 83.1 bits (175), Expect(2) = 7e-027
Identities = 32/63 (50%), Positives = 43/63 (68%)
Frame = +1 / +3
Query: 718 VNCGLSFGDWMAPDKPNPNELTGAIVGGPDKNDGFVDKRGNSSYTEPCTYINSLAIGPLA 897
+ C F + PNPN LTGAIVGGP++NDG+ D+R + S++EP TYIN+ +GPLA
Sbjct: 153 IGCDSGFEPFFHSANPNPNILTGAIVGGPNQNDGYPDERSDYSHSEPATYINAAMVGPLA 332
Query: 898 ALA 906
A
Sbjct: 333 YFA 341
Score = 58.3 bits (121), Expect(2) = 7e-027
Identities = 22/39 (56%), Positives = 29/39 (74%)
Frame = +1 / +3
Query: 586 RQQMDYLLGANPRHSSYVVGFGANPPTQPHHRGASTPVL 702
++Q+DY+LG NP SY+VGFG N P + HHRG+S P L
Sbjct: 18 KRQVDYILGENPIRMSYMVGFGPNFPKRIHHRGSSLPSL 134
>gb|CV236723.1|CV236723 WS01225.B21.1_C20 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01225_C20 3', mRNA sequence
Length = 937
Score = 66.1 bits (138), Expect(3) = 3e-026
Identities = 25/52 (48%), Positives = 31/52 (59%)
Frame = +1 / -1
Query: 541 CGNQPLPPARLHEFARQQMDYLLGANPRHSSYVVGFGANPPTQPHHRGASTP 696
C P+ L +FA+ Q DY+LG NP SY+VG+G P HHRGAS P
Sbjct: 727 CNGDSYKPSELRKFAKSQADYVLGNNPMKMSYLVGYGEKYPQYVHHRGASIP 572
Score = 49.6 bits (102), Expect(3) = 3e-026
Identities = 21/47 (44%), Positives = 27/47 (57%)
Frame = +1 / -1
Query: 745 WMAPDKPNPNELTGAIVGGPDKNDGFVDKRGNSSYTEPCTYINSLAI 885
W+ +PNPNE TGA+VGGP N+ FV N+S + NS I
Sbjct: 535 WLESKEPNPNEATGALVGGPFLNETFVSNDRNNSMQAEPSTYNSALI 395
Score = 41.4 bits (84), Expect(3) = 3e-026
Identities = 20/72 (27%), Positives = 36/72 (50%)
Frame = +1 / -1
Query: 334 SAGGAQNFKSQADNFVCAVLPDTAFHQVFITPGGVIHLRDGANSQYVTSTAFLLVVYADL 513
S G Q ++ A+ +C ++PD+ T GG+I + Q+ ++A L +Y+D
Sbjct: 937 SNSGLQMYRKTAEAVMCGLIPDSPTATKSRTDGGLIWVSQWNALQHPVASAXLAALYSDY 758
Query: 514 LLRTGQTVLCGN 549
+L +G L N
Sbjct: 757 MLSSGTAKLSCN 722
>gb|BU837593.1|BU837593 T103E10 Populus apical shoot cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 574
Score = 106 bits (227), Expect(3) = 4e-026
Identities = 44/105 (41%), Positives = 65/105 (61%)
Frame = +1 / +2
Query: 349 QNFKSQADNFVCAVLPDTAFHQVFITPGGVIHLRDGANSQYVTSTAFLLVVYADLLLRTG 528
+ F+ +A++F+C +LP++ + T GG+++ +N QYVTS FLL YA + TG
Sbjct: 134 EQFEGEAESFMCRILPNSPYKTTQYTQGGLMYKLPESNLQYVTSITFLLTTYAKYMKATG 313
Query: 529 QTVLCGNQPLPPARLHEFARQQMDYLLGANPRHSSYVVGFGANPP 663
T CGN + P L A++Q+DY+LG NP SY+VGFG N P
Sbjct: 314 HTFNCGNLLVTPNSLLYVAKRQVDYILGENPIRMSYMVGFGPNFP 448
Score = 25.8 bits (50), Expect(3) = 4e-026
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = +1 / +2
Query: 274 FSWDLKFPGAQVLLA 318
FSWD K+ G VLL+
Sbjct: 56 FSWDNKYAGVHVLLS 100
Score = 24.0 bits (46), Expect(3) = 4e-026
Identities = 9/23 (39%), Positives = 11/23 (47%)
Frame = +1 / +2
Query: 718 VNCGLSFGDWMAPDKPNPNELTG 786
+ C F + PNPN LTG
Sbjct: 506 IGCDSGFEPFFHSANPNPNILTG 574
>gb|AY535003.1| Populus tremuloides endo-1,4-beta-glucanase (Kor1) mRNA, complete cds
Length = 2562
Score = 67.0 bits (140), Expect(3) = 5e-026
Identities = 27/52 (51%), Positives = 33/52 (63%)
Frame = +1 / +2
Query: 541 CGNQPLPPARLHEFARQQMDYLLGANPRHSSYVVGFGANPPTQPHHRGASTP 696
CG L +FA+ Q+DY+LG NPR SY+VGFG + P HHRGAS P
Sbjct: 1667 CGPNFYSTDVLRDFAKTQIDYILGKNPRKMSYIVGFGNHYPKHLHHRGASIP 1822
Score = 66.1 bits (138), Expect(3) = 5e-026
Identities = 27/54 (50%), Positives = 34/54 (62%)
Frame = +1 / +2
Query: 745 WMAPDKPNPNELTGAIVGGPDKNDGFVDKRGNSSYTEPCTYINSLAIGPLAALA 906
W KPNPN L GA+V GPD++DGF D R N +YTEP N+ + L AL+
Sbjct: 1862 WRDTSKPNPNTLVGAMVAGPDRHDGFHDVRTNYNYTEPTIAGNAGLVAALVALS 2023
Score = 23.1 bits (44), Expect(3) = 5e-026
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +1 / +2
Query: 466 QYVTSTAFLLVVYADLL 516
QYV + AFL +++D L
Sbjct: 1589 QYVVNAAFLATLFSDYL 1639
>gb|AY660967.1| Populus tremula x Populus tremuloides Cel9A mRNA, complete cds
Length = 1860
Score = 67.0 bits (140), Expect(3) = 5e-026
Identities = 27/52 (51%), Positives = 33/52 (63%)
Frame = +1 / +1
Query: 541 CGNQPLPPARLHEFARQQMDYLLGANPRHSSYVVGFGANPPTQPHHRGASTP 696
CG L +FA+ Q+DY+LG NPR SY+VGFG + P HHRGAS P
Sbjct: 1405 CGPNFYSTDVLRDFAKTQIDYILGKNPRKMSYIVGFGNHYPKHLHHRGASIP 1560
Score = 66.1 bits (138), Expect(3) = 5e-026
Identities = 27/54 (50%), Positives = 34/54 (62%)
Frame = +1 / +1
Query: 745 WMAPDKPNPNELTGAIVGGPDKNDGFVDKRGNSSYTEPCTYINSLAIGPLAALA 906
W KPNPN L GA+V GPD++DGF D R N +YTEP N+ + L AL+
Sbjct: 1600 WRDTSKPNPNTLVGAMVAGPDRHDGFHDVRTNYNYTEPTIAGNAGLVAALVALS 1761
Score = 23.1 bits (44), Expect(3) = 5e-026
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +1 / +1
Query: 466 QYVTSTAFLLVVYADLL 516
QYV + AFL +++D L
Sbjct: 1327 QYVVNAAFLATLFSDYL 1377
>gb|CV262163.1|CV262163 WS02018.B21_M22 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02018_M22 3', mRNA sequence
Length = 925
Score = 67.0 bits (140), Expect(3) = 5e-026
Identities = 27/52 (51%), Positives = 33/52 (63%)
Frame = +1 / -1
Query: 541 CGNQPLPPARLHEFARQQMDYLLGANPRHSSYVVGFGANPPTQPHHRGASTP 696
CG L +FA+ Q+DY+LG NPR SY+VGFG + P HHRGAS P
Sbjct: 823 CGPNFYSTDVLRDFAKTQIDYILGKNPRKMSYIVGFGNHYPKHLHHRGASIP 668
Score = 66.1 bits (138), Expect(3) = 5e-026
Identities = 27/54 (50%), Positives = 34/54 (62%)
Frame = +1 / -1
Query: 745 WMAPDKPNPNELTGAIVGGPDKNDGFVDKRGNSSYTEPCTYINSLAIGPLAALA 906
W KPNPN L GA+V GPD++DGF D R N +YTEP N+ + L AL+
Sbjct: 628 WRDTSKPNPNTLVGAMVAGPDRHDGFHDVRTNYNYTEPTIAGNAGLVAALVALS 467
Score = 23.1 bits (44), Expect(3) = 5e-026
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +1 / -1
Query: 466 QYVTSTAFLLVVYADLL 516
QYV + AFL +++D L
Sbjct: 901 QYVVNAAFLATLFSDYL 851
>gb|DT507184.1|DT507184 WS02417.BR_J07 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02417_J07 5', mRNA sequence
Length = 822
Score = 67.0 bits (140), Expect(3) = 5e-026
Identities = 27/52 (51%), Positives = 33/52 (63%)
Frame = +1 / +3
Query: 541 CGNQPLPPARLHEFARQQMDYLLGANPRHSSYVVGFGANPPTQPHHRGASTP 696
CG L +FA+ Q+DY+LG NPR SY+VGFG + P HHRGAS P
Sbjct: 108 CGPNFYSTDVLRDFAKTQIDYILGKNPRKMSYIVGFGNHYPKHLHHRGASIP 263
Score = 66.1 bits (138), Expect(3) = 5e-026
Identities = 27/54 (50%), Positives = 34/54 (62%)
Frame = +1 / +3
Query: 745 WMAPDKPNPNELTGAIVGGPDKNDGFVDKRGNSSYTEPCTYINSLAIGPLAALA 906
W KPNPN L GA+V GPD++DGF D R N +YTEP N+ + L AL+
Sbjct: 303 WRDTSKPNPNTLVGAMVAGPDRHDGFHDVRTNYNYTEPTIAGNAGLVAALVALS 464
Score = 23.1 bits (44), Expect(3) = 5e-026
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +1 / +3
Query: 466 QYVTSTAFLLVVYADLL 516
QYV + AFL +++D L
Sbjct: 30 QYVVNAAFLATLFSDYL 80
>gb|CV266155.1|CV266155 WS02029.B21_E02 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02029_E02 3', mRNA sequence
Length = 807
Score = 67.0 bits (140), Expect(3) = 5e-026
Identities = 27/52 (51%), Positives = 33/52 (63%)
Frame = +1 / +2
Query: 541 CGNQPLPPARLHEFARQQMDYLLGANPRHSSYVVGFGANPPTQPHHRGASTP 696
CG L +FA+ Q+DY+LG NPR SY+VGFG + P HHRGAS P
Sbjct: 239 CGPNFYSTDVLRDFAKTQIDYILGKNPRKMSYIVGFGNHYPKHLHHRGASIP 394
Score = 66.1 bits (138), Expect(3) = 5e-026
Identities = 27/54 (50%), Positives = 34/54 (62%)
Frame = +1 / +2
Query: 745 WMAPDKPNPNELTGAIVGGPDKNDGFVDKRGNSSYTEPCTYINSLAIGPLAALA 906
W KPNPN L GA+V GPD++DGF D R N +YTEP N+ + L AL+
Sbjct: 434 WRDTSKPNPNTLVGAMVAGPDRHDGFHDVRTNYNYTEPTIAGNAGLVAALVALS 595
Score = 23.1 bits (44), Expect(3) = 5e-026
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +1 / +2
Query: 466 QYVTSTAFLLVVYADLL 516
QYV + AFL +++D L
Sbjct: 161 QYVVNAAFLATLFSDYL 211
>gb|BI128462.1|BI128462 G076P64Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 513
Score = 67.0 bits (140), Expect(3) = 5e-026
Identities = 27/52 (51%), Positives = 33/52 (63%)
Frame = +1 / +3
Query: 541 CGNQPLPPARLHEFARQQMDYLLGANPRHSSYVVGFGANPPTQPHHRGASTP 696
CG L +FA+ Q+DY+LG NPR SY+VGFG + P HHRGAS P
Sbjct: 105 CGPNFYSTDVLRDFAKTQIDYILGKNPRKMSYIVGFGNHYPKHLHHRGASIP 260
Score = 66.1 bits (138), Expect(3) = 5e-026
Identities = 27/54 (50%), Positives = 34/54 (62%)
Frame = +1 / +3
Query: 745 WMAPDKPNPNELTGAIVGGPDKNDGFVDKRGNSSYTEPCTYINSLAIGPLAALA 906
W KPNPN L GA+V GPD++DGF D R N +YTEP N+ + L AL+
Sbjct: 300 WRDTSKPNPNTLVGAMVAGPDRHDGFHDVRTNYNYTEPTIAGNAGLVAALVALS 461
Score = 23.1 bits (44), Expect(3) = 5e-026
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +1 / +3
Query: 466 QYVTSTAFLLVVYADLL 516
QYV + AFL +++D L
Sbjct: 27 QYVVNAAFLATLFSDYL 77
Database: Populus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:49 PM
Number of letters in database: 203,408,664
Number of sequences in database: 369,679
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 377,094,534
Number of Sequences: 369679
Number of extensions: 5045942
Number of successful extensions: 33782
Number of sequences better than 1.0e-020: 108
length of database: 67,802,888
effective HSP length: 53
effective length of database: 48,209,901
effective search space used: 16487786142
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)