TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3748389.2.1
(663 letters)
Database: Populus_nucl_with_EST.fasta
369,679 sequences; 203,408,664 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CV233799.1|CV233799 WS01212.B21_G21 PT-GT-FL-A-3 Populus... 142 4e-046
gb|CV244519.1|CV244519 WS0254.B21_O04 PT-MB-N-A-15 Populus ... 142 4e-046
gb|DT493238.1|DT493238 WS02553.C21_M18 PT-MB-N-A-15 Populus... 142 4e-046
gb|DT482781.1|DT482781 WS02520.B21_M07 PT-MB-N-A-15 Populus... 142 4e-046
gb|DT484070.1|DT484070 WS02524.B21_F19 PT-MB-N-A-15 Populus... 142 4e-046
gb|DT526383.1|DT526383 WS02047.C21_O05 PTxN-IB-N-A-11 Popul... 144 2e-044
gb|DT488649.1|DT488649 WS02537.B21_A12 PT-MB-N-A-15 Populus... 135 6e-044
gb|AJ778656.1|AJ778656 AJ778656 Populus euphratica cambium ... 138 2e-042
gb|CA926703.1|CA926703 MTU6CR.P18.B12 Aspen root cDNA Libra... 108 9e-036
gb|CX173198.1|CX173198 F01_69-95_11.ab1 leaf inoculated wit... 99 2e-035
gb|CV226548.1|CV226548 WS0164.B21_J13 PT-DX-A-7 Populus tri... 148 3e-035
gb|DT486871.1|DT486871 WS02532.B21_C15 PT-MB-N-A-15 Populus... 148 4e-035
gb|AJ775611.1|AJ775611 AJ775611 Populus euphratica shoot 3-... 134 6e-031
gb|DT515664.1|DT515664 WS02429.B21.1_D01 PTxD-ICC-N-A-14 Po... 100 2e-029
gb|BP932780.1|BP932780 BP932780 full-length enriched poplar... 128 4e-029
gb|DT488279.1|DT488279 WS02535.B21_P22 PT-MB-N-A-15 Populus... 99 4e-029
gb|DT492006.1|DT492006 WS02549.C21_G15 PT-MB-N-A-15 Populus... 93 4e-029
gb|DT480509.1|DT480509 WS02529.BR_B22 PT-MB-N-A-15 Populus ... 93 4e-029
gb|CN517813.1|CN517813 GQ0094.B3_C03 GQ009 Populus trichoca... 127 7e-029
gb|CX658962.1|CX658962 PO01024F10 Poplar SC cDNA library Po... 87 8e-029
gb|DV465576.1|DV465576 MTUNUL1.P40.D07 NUL Populus fremonti... 89 3e-028
gb|CV245251.1|CV245251 WS0256.B21_O06 PT-MB-N-A-15 Populus ... 96 4e-028
gb|CV283727.1|CV283727 WS0188.B21_B24 PTxD-IL-N-A-9 Populus... 93 4e-028
gb|DT512168.1|DT512168 WS02418.B21_I18 PTxD-ICC-N-A-14 Popu... 96 4e-028
gb|DT515014.1|DT515014 WS02426.B21_G13 PTxD-ICC-N-A-14 Popu... 100 7e-028
gb|CX180458.1|CX180458 E02_45-44_10.ab1 leaf inoculated wit... 99 7e-028
gb|CV256857.1|CV256857 WS0244.B21_P21 PTxD-ICC-N-A-14 Popul... 98 1e-027
gb|CK317829.1|CK317829 B9P02c09 Populus stem seasonal libra... 105 2e-027
gb|CK318694.1|CK318694 X9P02d02 Populus stem seasonal libra... 105 2e-027
gb|CK096354.1|CK096354 UB11CPF06.3pR Populus active cambium... 92 3e-027
gb|CK090560.1|CK090560 F013P59.3pR Populus flower cDNA libr... 100 3e-027
gb|CV272744.1|CV272744 WS0158.B21_J05 PTxN-IB-A-6 Populus t... 91 6e-027
gb|DT481540.1|DT481540 WS02532.BR_C15 PT-MB-N-A-15 Populus ... 120 8e-027
gb|DT485768.1|DT485768 WS02529.B21_B22 PT-MB-N-A-15 Populus... 93 1e-026
gb|CV253317.1|CV253317 WS0221.B21_I23 PTxD-ICC-A-12 Populus... 96 2e-026
gb|BU864403.1|BU864403 S039H12 Populus imbibed seed cDNA li... 89 3e-026
gb|DT481513.1|DT481513 WS02532.BR_B09 PT-MB-N-A-15 Populus ... 78 3e-026
gb|DT486843.1|DT486843 WS02532.B21_B09 PT-MB-N-A-15 Populus... 78 3e-026
gb|DT488655.1|DT488655 WS02537.B21_A19 PT-MB-N-A-15 Populus... 87 4e-026
gb|CF229053.1|CF229053 PtaXM0020F3F0311 Poplar cDNA library... 88 3e-025
gb|DT505087.1|DT505087 WS01315.B21_P21 PTxD-IL-FL-A-4 Popul... 90 5e-025
gb|CV267405.1|CV267405 WS02031.B21_K13 PTxN-IB-N-A-11 Popul... 91 5e-025
gb|DT488662.1|DT488662 WS02537.B21_B03 PT-MB-N-A-15 Populus... 73 5e-025
gb|CV244554.1|CV244554 WS0254.B21_P16 PT-MB-N-A-15 Populus ... 73 5e-025
gb|CF119195.1|CF119195 MTU10CS.P14.F09 Aspen stem cDNA Libr... 88 7e-025
gb|DT506782.1|DT506782 WS02416.BR_I02 PTxD-ICC-N-A-14 Popul... 100 7e-025
gb|DT511451.1|DT511451 WS02416.B21_I02 PTxD-ICC-N-A-14 Popu... 100 7e-025
gb|CK091692.1|CK091692 F118P83.3pR Populus flower cDNA libr... 88 1e-024
gb|DT511146.1|DT511146 WS02429.BR_K23 PTxD-ICC-N-A-14 Popul... 112 2e-024
gb|DT515845.1|DT515845 WS02429.B21.1_K23 PTxD-ICC-N-A-14 Po... 112 2e-024
gb|DT476092.1|DT476092 WS01228.B21_E09 PT-GT-FL-A-3 Populus... 88 2e-024
gb|DT476665.1|DT476665 WS01230.B21_F21 PT-GT-FL-A-3 Populus... 88 2e-024
gb|CV225916.1|CV225916 WS0162.B21_M05 PT-DX-A-7 Populus tri... 86 2e-024
gb|DT504178.1|DT504178 WS01312.B21_F06 PTxD-IL-FL-A-4 Popul... 88 2e-024
gb|CV281059.1|CV281059 WS0138.B21_N13 PTxD-IL-FL-A-4 Populu... 88 2e-024
gb|CX182229.1|CX182229 D07_45-96_07.ab1 leaf inoculated wit... 86 2e-024
gb|CX172393.1|CX172393 D04_69-43_08.ab1 leaf inoculated wit... 88 2e-024
gb|CV264975.1|CV264975 WS02025.B21_P23 PTxN-IB-N-A-11 Popul... 89 3e-024
gb|CX170550.1|CX170550 B01_69-6_03.ab1 leaf inoculated with... 89 3e-024
gb|CV280952.1|CV280952 WS0138.B21_F18 PTxD-IL-FL-A-4 Populu... 76 9e-024
gb|CK096689.1|CK096689 UB23CPB11.3pR Populus active cambium... 93 1e-023
gb|DT516616.1|DT516616 WS02431.B21_O23 PTxD-ICC-N-A-14 Popu... 96 2e-023
gb|BP929857.1|BP929857 BP929857 full-length enriched poplar... 104 2e-023
gb|CV278530.1|CV278530 WS0146.B21_K10 PTxD-IL-A-5 Populus t... 100 4e-023
gb|CX179951.1|CX179951 G06_45-20_14.ab1 leaf inoculated wit... 81 8e-023
gb|DN500559.1|DN500559 UL63PA05.5pR Populus cold stressed l... 87 1e-022
gb|CF119424.1|CF119424 MTU10CS.P1.F09 Aspen stem cDNA Libra... 81 1e-022
gb|CV265766.1|CV265766 WS02028.B21_C18 PTxN-IB-N-A-11 Popul... 88 1e-022
gb|CV243120.1|CV243120 WS02516.B21.1_P07 PT-MB-N-A-15 Popul... 89 2e-022
gb|CA825345.1|CA825345 R57D03 two-month-old roots from clon... 85 2e-022
gb|DT490028.1|DT490028 WS02543.B21_N12 PT-MB-N-A-15 Populus... 73 3e-022
gb|DT482172.1|DT482172 WS02519.B21_B13 PT-MB-N-A-15 Populus... 85 3e-022
gb|CV253471.1|CV253471 WS0222.B21_A18 PTxD-ICC-A-12 Populus... 97 7e-022
gb|CK320835.1|CK320835 X9SP06f04 Populus stem seasonal libr... 89 1e-021
gb|DT521294.1|DT521294 WS02033.B21_O13 PTxN-IB-N-A-11 Popul... 103 1e-021
gb|DN503651.1|DN503651 X016B09.3pR Populus wood cDNA librar... 71 1e-021
gb|DT504306.1|DT504306 WS01312.B21_N15 PTxD-IL-FL-A-4 Popul... 84 1e-021
gb|BU894803.1|BU894803 X015C04 Populus wood cDNA library Po... 80 1e-021
gb|DT483393.1|DT483393 WS02522.B21_H12 PT-MB-N-A-15 Populus... 69 2e-021
gb|DT492292.1|DT492292 WS02550.C21_D20 PT-MB-N-A-15 Populus... 90 2e-021
gb|DT488958.1|DT488958 WS02537.B21_O15 PT-MB-N-A-15 Populus... 88 2e-021
gb|BU830567.1|BU830567 T010B06 Populus apical shoot cDNA li... 63 8e-021
gb|CF119013.1|CF119013 MTU10CS.P12.D05 Aspen stem cDNA Libr... 92 9e-021
gb|AJ767578.1|AJ767578 AJ767578 Populus euphratica leaf adu... 80 9e-021
>gb|CV233799.1|CV233799 WS01212.B21_G21 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01212_G21 3', mRNA sequence
Length = 927
Score = 142 bits (305), Expect(3) = 4e-046
Identities = 54/104 (51%), Positives = 76/104 (73%)
Frame = +3 / -1
Query: 153 LPEGFEERVNGRGLVCRGWVPQPRLLAHESVGGFLTHAGWNSIAEGLSRGVTMVLLPLMF 332
LP+GF+ERV GRG+V W PQ R++AHESVGGFLTH G++S+ E LS G+ +++LP
Sbjct: 651 LPDGFDERVKGRGVVWTSWAPQLRIMAHESVGGFLTHCGYSSVIEALSFGLALIMLPFAI 472
Query: 333 DQGLNARLLMDKKIGIEVERNEDDGTFAPKDIADALRTAMAENQ 464
DQGL AR+ KK+GIEV R+E DG+F +A++LR + + +
Sbjct: 471 DQGLIARVFEGKKVGIEVPRDEQDGSFTRNSVAESLRLVIVDKE 340
Score = 56.1 bits (116), Expect(3) = 4e-046
Identities = 23/42 (54%), Positives = 28/42 (66%)
Frame = +3 / -1
Query: 3 SVVYAAFGSEAKLTSAQLQTIALGLEASGLPFLWAFRPPADA 128
SVVY AFGSE + ++ +ALGLE SGLPF WA R D+
Sbjct: 783 SVVYIAFGSELTINQDEITELALGLELSGLPFFWALRNQDDS 658
Score = 24.4 bits (47), Expect(3) = 4e-046
Identities = 6/27 (22%), Positives = 17/27 (62%)
Frame = +3 / -1
Query: 480 KELAEVFGNDEANDQCLRDFLRYLSEY 560
+++ +FG+ +D+C+ F+ +L +
Sbjct: 312 QQMVTLFGDKSISDRCMDQFVAFLRSH 232
>gb|CV244519.1|CV244519 WS0254.B21_O04 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS0254_O04 3', mRNA sequence
Length = 878
Score = 142 bits (305), Expect(3) = 4e-046
Identities = 54/104 (51%), Positives = 76/104 (73%)
Frame = +3 / -3
Query: 153 LPEGFEERVNGRGLVCRGWVPQPRLLAHESVGGFLTHAGWNSIAEGLSRGVTMVLLPLMF 332
LP+GF+ERV GRG+V W PQ R++AHESVGGFLTH G++S+ E LS G+ +++LP
Sbjct: 669 LPDGFDERVKGRGVVWTSWAPQLRIMAHESVGGFLTHCGYSSVIEALSFGLALIMLPFAI 490
Query: 333 DQGLNARLLMDKKIGIEVERNEDDGTFAPKDIADALRTAMAENQ 464
DQGL AR+ KK+GIEV R+E DG+F +A++LR + + +
Sbjct: 489 DQGLIARVFEGKKVGIEVPRDEQDGSFTRNSVAESLRLVIVDKE 358
Score = 56.1 bits (116), Expect(3) = 4e-046
Identities = 23/42 (54%), Positives = 28/42 (66%)
Frame = +3 / -3
Query: 3 SVVYAAFGSEAKLTSAQLQTIALGLEASGLPFLWAFRPPADA 128
SVVY AFGSE + ++ +ALGLE SGLPF WA R D+
Sbjct: 801 SVVYIAFGSELTINQDEITELALGLELSGLPFFWALRNQDDS 676
Score = 24.4 bits (47), Expect(3) = 4e-046
Identities = 6/27 (22%), Positives = 17/27 (62%)
Frame = +3 / -3
Query: 480 KELAEVFGNDEANDQCLRDFLRYLSEY 560
+++ +FG+ +D+C+ F+ +L +
Sbjct: 330 QQMVTLFGDKSISDRCMDQFVAFLRSH 250
>gb|DT493238.1|DT493238 WS02553.C21_M18 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02553_M18 3', mRNA sequence
Length = 849
Score = 142 bits (305), Expect(3) = 4e-046
Identities = 54/104 (51%), Positives = 76/104 (73%)
Frame = +3 / -3
Query: 153 LPEGFEERVNGRGLVCRGWVPQPRLLAHESVGGFLTHAGWNSIAEGLSRGVTMVLLPLMF 332
LP+GF+ERV GRG+V W PQ R++AHESVGGFLTH G++S+ E LS G+ +++LP
Sbjct: 667 LPDGFDERVKGRGVVWTSWAPQLRIMAHESVGGFLTHCGYSSVIEALSFGLALIMLPFAI 488
Query: 333 DQGLNARLLMDKKIGIEVERNEDDGTFAPKDIADALRTAMAENQ 464
DQGL AR+ KK+GIEV R+E DG+F +A++LR + + +
Sbjct: 487 DQGLIARVFEGKKVGIEVPRDEQDGSFTRNSVAESLRLVIVDKE 356
Score = 56.1 bits (116), Expect(3) = 4e-046
Identities = 23/42 (54%), Positives = 28/42 (66%)
Frame = +3 / -3
Query: 3 SVVYAAFGSEAKLTSAQLQTIALGLEASGLPFLWAFRPPADA 128
SVVY AFGSE + ++ +ALGLE SGLPF WA R D+
Sbjct: 799 SVVYIAFGSELTINQDEITELALGLELSGLPFFWALRNQDDS 674
Score = 24.4 bits (47), Expect(3) = 4e-046
Identities = 6/27 (22%), Positives = 17/27 (62%)
Frame = +3 / -3
Query: 480 KELAEVFGNDEANDQCLRDFLRYLSEY 560
+++ +FG+ +D+C+ F+ +L +
Sbjct: 328 QQMVTLFGDKSISDRCMDQFVAFLRSH 248
>gb|DT482781.1|DT482781 WS02520.B21_M07 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02520_M07 3', mRNA sequence
Length = 841
Score = 142 bits (305), Expect(3) = 4e-046
Identities = 54/104 (51%), Positives = 76/104 (73%)
Frame = +3 / -3
Query: 153 LPEGFEERVNGRGLVCRGWVPQPRLLAHESVGGFLTHAGWNSIAEGLSRGVTMVLLPLMF 332
LP+GF+ERV GRG+V W PQ R++AHESVGGFLTH G++S+ E LS G+ +++LP
Sbjct: 653 LPDGFDERVKGRGVVWTSWAPQLRIMAHESVGGFLTHCGYSSVIEALSFGLALIMLPFAI 474
Query: 333 DQGLNARLLMDKKIGIEVERNEDDGTFAPKDIADALRTAMAENQ 464
DQGL AR+ KK+GIEV R+E DG+F +A++LR + + +
Sbjct: 473 DQGLIARVFEGKKVGIEVPRDEQDGSFTRNSVAESLRLVIVDKE 342
Score = 56.1 bits (116), Expect(3) = 4e-046
Identities = 23/42 (54%), Positives = 28/42 (66%)
Frame = +3 / -3
Query: 3 SVVYAAFGSEAKLTSAQLQTIALGLEASGLPFLWAFRPPADA 128
SVVY AFGSE + ++ +ALGLE SGLPF WA R D+
Sbjct: 785 SVVYIAFGSELTINQDEITELALGLELSGLPFFWALRNQDDS 660
Score = 24.4 bits (47), Expect(3) = 4e-046
Identities = 6/27 (22%), Positives = 17/27 (62%)
Frame = +3 / -3
Query: 480 KELAEVFGNDEANDQCLRDFLRYLSEY 560
+++ +FG+ +D+C+ F+ +L +
Sbjct: 314 QQMVTLFGDKSISDRCMDQFVAFLRSH 234
>gb|DT484070.1|DT484070 WS02524.B21_F19 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02524_F19 3', mRNA sequence
Length = 788
Score = 142 bits (305), Expect(3) = 4e-046
Identities = 54/104 (51%), Positives = 76/104 (73%)
Frame = +3 / -3
Query: 153 LPEGFEERVNGRGLVCRGWVPQPRLLAHESVGGFLTHAGWNSIAEGLSRGVTMVLLPLMF 332
LP+GF+ERV GRG+V W PQ R++AHESVGGFLTH G++S+ E LS G+ +++LP
Sbjct: 648 LPDGFDERVKGRGVVWTSWAPQLRIMAHESVGGFLTHCGYSSVIEALSFGLALIMLPFAI 469
Query: 333 DQGLNARLLMDKKIGIEVERNEDDGTFAPKDIADALRTAMAENQ 464
DQGL AR+ KK+GIEV R+E DG+F +A++LR + + +
Sbjct: 468 DQGLIARVFEGKKVGIEVPRDEQDGSFTRNSVAESLRLVIVDKE 337
Score = 56.1 bits (116), Expect(3) = 4e-046
Identities = 23/42 (54%), Positives = 28/42 (66%)
Frame = +3 / -3
Query: 3 SVVYAAFGSEAKLTSAQLQTIALGLEASGLPFLWAFRPPADA 128
SVVY AFGSE + ++ +ALGLE SGLPF WA R D+
Sbjct: 780 SVVYIAFGSELTINQDEITELALGLELSGLPFFWALRNQDDS 655
Score = 24.4 bits (47), Expect(3) = 4e-046
Identities = 6/27 (22%), Positives = 17/27 (62%)
Frame = +3 / -3
Query: 480 KELAEVFGNDEANDQCLRDFLRYLSEY 560
+++ +FG+ +D+C+ F+ +L +
Sbjct: 309 QQMVTLFGDKSISDRCMDQFVAFLRSH 229
>gb|DT526383.1|DT526383 WS02047.C21_O05 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02047_O05 3', mRNA sequence
Length = 926
Score = 144 bits (308), Expect(2) = 2e-044
Identities = 56/104 (53%), Positives = 76/104 (73%)
Frame = +3 / -1
Query: 153 LPEGFEERVNGRGLVCRGWVPQPRLLAHESVGGFLTHAGWNSIAEGLSRGVTMVLLPLMF 332
LP+ FEERV GRG+V W PQ R++AHESVGGFLTH G++S+AE LS G+ +++LP
Sbjct: 677 LPDEFEERVKGRGVVWTSWAPQLRIMAHESVGGFLTHCGFSSVAEALSFGLALIMLPFAI 498
Query: 333 DQGLNARLLMDKKIGIEVERNEDDGTFAPKDIADALRTAMAENQ 464
DQGL AR+ KK+GIEV R+E DG+F +A++LR M + +
Sbjct: 497 DQGLIARVFEGKKVGIEVPRDEQDGSFTRNSVAESLRLVMVDKE 366
Score = 55.6 bits (115), Expect(2) = 2e-044
Identities = 23/42 (54%), Positives = 28/42 (66%)
Frame = +3 / -1
Query: 3 SVVYAAFGSEAKLTSAQLQTIALGLEASGLPFLWAFRPPADA 128
SVVY AFGSE + ++ +ALGLE SGLPF WA R D+
Sbjct: 809 SVVYIAFGSELTINQNEITELALGLELSGLPFFWALRNRDDS 684
>gb|DT488649.1|DT488649 WS02537.B21_A12 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02537_A12 3', mRNA sequence
Length = 834
Score = 135 bits (290), Expect(2) = 6e-044
Identities = 52/104 (50%), Positives = 71/104 (68%)
Frame = +3 / -1
Query: 153 LPEGFEERVNGRGLVCRGWVPQPRLLAHESVGGFLTHAGWNSIAEGLSRGVTMVLLPLMF 332
LP GFEER G+G+VC W PQ +LAHES+ GFLTH+GW+S+ E L+ ++LL
Sbjct: 672 LPPGFEERTKGQGVVCTTWAPQLMILAHESIAGFLTHSGWSSVVEALTFQKALILLTFYS 493
Query: 333 DQGLNARLLMDKKIGIEVERNEDDGTFAPKDIADALRTAMAENQ 464
DQG+NAR+L +KKIG + RNE DG+F +A++LR M +
Sbjct: 492 DQGINARVLEEKKIGYSIPRNELDGSFTRDSVAESLRLVMVSEE 361
Score = 73.5 bits (154), Expect(2) = 1e-021
Identities = 39/85 (45%), Positives = 45/85 (52%)
Frame = -3 / +2
Query: 406 PSSSFLSTSIPIFLSIRSLALRP*SNISGNSTIVTPRERPSAMEFQPAWVRNPPTDS*AN 227
PS+SFL PIF S ++LA P*S + S S E P V+NP DS*A
Sbjct: 419 PSNSFLGMEYPIFFSSKTLAFIP*SE*NVRSMSAF*NVSASTTELHPE*VKNPAIDS*AK 598
Query: 226 SLG*GTQPRQTNPRPLTRSSKPSGN 152
+ *G Q QT P PL RSS P GN
Sbjct: 599 IMS*GAQVVQTTPCPLVRSSNPGGN 673
Score = 62.0 bits (129), Expect(2) = 6e-044
Identities = 26/37 (70%), Positives = 28/37 (75%)
Frame = +3 / -1
Query: 3 SVVYAAFGSEAKLTSAQLQTIALGLEASGLPFLWAFR 113
SVVY AFGSEAK + AQL +ALGLE SGLPF W R
Sbjct: 819 SVVYVAFGSEAKPSQAQLTELALGLELSGLPFFWVLR 709
Score = 49.6 bits (102), Expect(2) = 1e-021
Identities = 22/37 (59%), Positives = 26/37 (70%)
Frame = -3 / +2
Query: 112 LNAQRNGRPEASKPSAIVWSCALVSFASLPKAAYTTE 2
L Q+NG+P+ S PSA S A + FASLPKA YTTE
Sbjct: 710 LRTQKNGKPDNSNPSANSVSWA*LGFASLPKATYTTE 820
>gb|AJ778656.1|AJ778656 AJ778656 Populus euphratica cambium 3-6 months Populus euphratica
cDNA clone P0000600004C01F1, mRNA sequence
Length = 478
Score = 138 bits (295), Expect(2) = 2e-042
Identities = 52/95 (54%), Positives = 72/95 (75%)
Frame = +3 / +3
Query: 153 LPEGFEERVNGRGLVCRGWVPQPRLLAHESVGGFLTHAGWNSIAEGLSRGVTMVLLPLMF 332
LP+GFEERV GRG+V W PQ R++AHESVGGF+TH G++S+ E LS G+ +++LP
Sbjct: 192 LPDGFEERVKGRGVVWTSWAPQLRIMAHESVGGFVTHCGYSSVIEALSFGLALIMLPFAI 371
Query: 333 DQGLNARLLMDKKIGIEVERNEDDGTFAPKDIADA 437
DQGL AR+ +KK+GIEV R+E DG+F +A++
Sbjct: 372 DQGLIARVFEEKKVGIEVPRDEQDGSFTRNSVAES 476
Score = 54.7 bits (113), Expect(2) = 2e-042
Identities = 23/42 (54%), Positives = 27/42 (64%)
Frame = +3 / +3
Query: 3 SVVYAAFGSEAKLTSAQLQTIALGLEASGLPFLWAFRPPADA 128
SVVY AFGSE + + +ALGLE SGLPF WA R D+
Sbjct: 60 SVVYIAFGSELTMNQNDITELALGLELSGLPFFWALRNRDDS 185
>gb|CA926703.1|CA926703 MTU6CR.P18.B12 Aspen root cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 439
Score = 108 bits (230), Expect(2) = 9e-036
Identities = 41/74 (55%), Positives = 54/74 (72%)
Frame = +3 / -1
Query: 153 LPEGFEERVNGRGLVCRGWVPQPRLLAHESVGGFLTHAGWNSIAEGLSRGVTMVLLPLMF 332
LP GFEER G+G+VC W PQ +LAHES+ GFLTH+GW+S+ E L+ ++LL
Sbjct: 223 LPPGFEERTKGQGVVCTTWAPQLMILAHESIAGFLTHSGWSSVVEALTFQKALILLTFYS 44
Query: 333 DQGLNARLLMDKKI 374
DQG+NAR+L +KKI
Sbjct: 43 DQGINARVLEEKKI 2
Score = 62.0 bits (129), Expect(2) = 9e-036
Identities = 26/37 (70%), Positives = 28/37 (75%)
Frame = +3 / -1
Query: 3 SVVYAAFGSEAKLTSAQLQTIALGLEASGLPFLWAFR 113
SVVY AFGSEAK + AQL +ALGLE SGLPF W R
Sbjct: 370 SVVYVAFGSEAKPSQAQLTELALGLELSGLPFFWVLR 260
>gb|CX173198.1|CX173198 F01_69-95_11.ab1 leaf inoculated with Marssonia pathogen of Populus
deltoides Populus deltoides cDNA, mRNA sequence
Length = 652
Score = 98.7 bits (209), Expect(3) = 2e-035
Identities = 38/78 (48%), Positives = 56/78 (71%)
Frame = +3 / -3
Query: 231 AHESVGGFLTHAGWNSIAEGLSRGVTMVLLPLMFDQGLNARLLMDKKIGIEVERNEDDGT 410
AHESVGGFLTH G++S+AE LS G+ +++LP DQG AR+ +KK+GIEV R+E DG+
Sbjct: 275 AHESVGGFLTHCGFSSVAEALSFGIALMMLPFAIDQGSIARVFEEKKVGIEVPRDEQDGS 96
Query: 411 FAPKDIADALRTAMAENQ 464
F +A++L + + +
Sbjct: 95 FTRNSVAESLWLVIVDKE 42
Score = 55.6 bits (115), Expect(3) = 2e-035
Identities = 23/42 (54%), Positives = 28/42 (66%)
Frame = +3 / -3
Query: 3 SVVYAAFGSEAKLTSAQLQTIALGLEASGLPFLWAFRPPADA 128
SVVY AFGSE + ++ +ALGLE SGLPF WA R D+
Sbjct: 464 SVVYIAFGSELTINQNEITELALGLELSGLPFFWALRNRDDS 339
Score = 33.1 bits (66), Expect(3) = 2e-035
Identities = 12/15 (80%), Positives = 14/15 (93%)
Frame = +3 / -3
Query: 153 LPEGFEERVNGRGLV 197
LP+GFEERV GRG+V
Sbjct: 332 LPDGFEERVKGRGVV 288
>gb|CV226548.1|CV226548 WS0164.B21_J13 PT-DX-A-7 Populus trichocarpa cDNA clone WS0164_J13
3', mRNA sequence
Length = 823
Score = 148 bits (318), Expect = 3e-035
Identities = 57/121 (47%), Positives = 81/121 (66%)
Frame = +3 / +2
Query: 6 VVYAAFGSEAKLTSAQLQTIALGLEASGLPFLWAFRPPADAAPGQGTGGLPEGFEERVNG 185
VVY +G++ LT Q++ +A GLE SG+ F+W + P+ G+G +P GFE+RV G
Sbjct: 302 VVYVCYGTQVLLTKDQMEAVASGLEKSGVHFIWCVKQPSKEHVGEGYSMIPSGFEDRVAG 481
Query: 186 RGLVCRGWVPQPRLLAHESVGGFLTHAGWNSIAEGLSRGVTMVLLPLMFDQGLNARLLMD 365
RGL+ RGW PQ +L+H +VG FLTH GWNSI EG+ GV M+ P+ DQ + A LL++
Sbjct: 482 RGLIIRGWAPQVWILSHRAVGAFLTHCGWNSILEGIVAGVPMLACPMRADQFVGATLLVE 661
Query: 366 K 368
+
Sbjct: 662 E 664
>gb|DT486871.1|DT486871 WS02532.B21_C15 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02532_C15 3', mRNA sequence
Length = 787
Score = 148 bits (317), Expect = 4e-035
Identities = 57/121 (47%), Positives = 81/121 (66%)
Frame = +3 / -3
Query: 6 VVYAAFGSEAKLTSAQLQTIALGLEASGLPFLWAFRPPADAAPGQGTGGLPEGFEERVNG 185
VVY +G++ LT Q++ +A GLE SG+ F+W + P+ G+G +P GFE+RV G
Sbjct: 695 VVYVCYGTQVVLTKDQVEAVASGLEKSGVHFIWCVKQPSKEHVGEGYSMIPSGFEDRVAG 516
Query: 186 RGLVCRGWVPQPRLLAHESVGGFLTHAGWNSIAEGLSRGVTMVLLPLMFDQGLNARLLMD 365
RGL+ RGW PQ +L+H +VG FLTH GWNSI EG+ GV M+ P+ DQ + A LL++
Sbjct: 515 RGLIIRGWAPQVWILSHRAVGAFLTHCGWNSILEGIVAGVPMLACPMAADQFVGATLLVE 336
Query: 366 K 368
+
Sbjct: 335 E 333
>gb|AJ775611.1|AJ775611 AJ775611 Populus euphratica shoot 3-6 months Populus euphratica
cDNA clone P0000300034E10F1, mRNA sequence
Length = 589
Score = 134 bits (287), Expect = 6e-031
Identities = 53/122 (43%), Positives = 80/122 (65%)
Frame = +3 / +3
Query: 3 SVVYAAFGSEAKLTSAQLQTIALGLEASGLPFLWAFRPPADAAPGQGTGGLPEGFEERVN 182
SV+Y FGS+ L Q++ +A GLE S + F+W + +G G +P+GF+ER+
Sbjct: 132 SVLYVCFGSQKLLNKKQMEALADGLEKSMVRFIWVVKTGTAQQVEEGYGVVPDGFDERLA 311
Query: 183 GRGLVCRGWVPQPRLLAHESVGGFLTHAGWNSIAEGLSRGVTMVLLPLMFDQGLNARLLM 362
GRGLV RGW PQ ++L+H +VG FL+H GWNS EG+ G ++ P+ DQ ++ARLL+
Sbjct: 312 GRGLVIRGWAPQVKILSHRAVGWFLSHCGWNSTLEGIVAGAMILAWPMEADQFIDARLLV 491
Query: 363 DK 368
++
Sbjct: 492 EE 497
>gb|DT515664.1|DT515664 WS02429.B21.1_D01 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02429_D01 3', mRNA sequence
Length = 944
Score = 100 bits (212), Expect(2) = 2e-029
Identities = 37/71 (52%), Positives = 49/71 (69%)
Frame = +3 / -2
Query: 153 LPEGFEERVNGRGLVCRGWVPQPRLLAHESVGGFLTHAGWNSIAEGLSRGVTMVLLPLMF 332
LPEGFEER+ G GL+ RGW PQ +L HE++G F+TH GWNS EG++ G MV P+
Sbjct: 580 LPEGFEERMEGMGLIIRGWAPQVLILDHEAIGAFVTHCGWNSTLEGITAGKPMVTWPIFA 401
Query: 333 DQGLNARLLMD 365
+Q N +L+ D
Sbjct: 400 EQFYNEKLVTD 368
Score = 48.7 bits (100), Expect(2) = 2e-029
Identities = 20/37 (54%), Positives = 24/37 (64%)
Frame = +3 / -2
Query: 3 SVVYAAFGSEAKLTSAQLQTIALGLEASGLPFLWAFR 113
SVVY FGS + +QL+ IA GLEASG F+W R
Sbjct: 727 SVVYICFGSTTNFSDSQLKEIAAGLEASGQQFIWVVR 617
>gb|BP932780.1|BP932780 BP932780 full-length enriched poplar cDNA library Populus nigra
cDNA clone PnFL1-041_A20.r 3', mRNA sequence
Length = 670
Score = 128 bits (274), Expect = 4e-029
Identities = 49/97 (50%), Positives = 70/97 (72%)
Frame = +3 / -1
Query: 174 RVNGRGLVCRGWVPQPRLLAHESVGGFLTHAGWNSIAEGLSRGVTMVLLPLMFDQGLNAR 353
RV GRG+V W PQ R++AHESVGGF TH G++S+AE LS G+ +++LP DQGL AR
Sbjct: 670 RVKGRGVVWTSWAPQLRIMAHESVGGFWTHCGFSSVAEALSFGLALIMLPFAIDQGLIAR 491
Query: 354 LLMDKKIGIEVERNEDDGTFAPKDIADALRTAMAENQ 464
+ +KK+GIEV R+E DG+F +A++LR + + +
Sbjct: 490 VFEEKKVGIEVPRDEQDGSFTRNSVAESLRLVIVDKE 380
>gb|DT488279.1|DT488279 WS02535.B21_P22 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02535_P22 3', mRNA sequence
Length = 935
Score = 99.1 bits (210), Expect(2) = 4e-029
Identities = 37/71 (52%), Positives = 49/71 (69%)
Frame = +3 / -1
Query: 153 LPEGFEERVNGRGLVCRGWVPQPRLLAHESVGGFLTHAGWNSIAEGLSRGVTMVLLPLMF 332
LPEGFEER+ G GL+ RGW PQ +L HE++G F+TH GWNS EG++ G MV P+
Sbjct: 749 LPEGFEERMEGVGLIIRGWAPQVLILDHEAIGAFVTHCGWNSTLEGITAGKPMVTWPIFA 570
Query: 333 DQGLNARLLMD 365
+Q N +L+ D
Sbjct: 569 EQFYNEKLVTD 537
Score = 48.7 bits (100), Expect(2) = 4e-029
Identities = 20/37 (54%), Positives = 24/37 (64%)
Frame = +3 / -1
Query: 3 SVVYAAFGSEAKLTSAQLQTIALGLEASGLPFLWAFR 113
SVVY FGS + +QL+ IA GLEASG F+W R
Sbjct: 896 SVVYICFGSTTNFSDSQLKEIAAGLEASGQQFIWVVR 786
>gb|DT492006.1|DT492006 WS02549.C21_G15 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02549_G15 3', mRNA sequence
Length = 870
Score = 93.2 bits (197), Expect(2) = 4e-029
Identities = 32/71 (45%), Positives = 51/71 (71%)
Frame = +3 / -1
Query: 153 LPEGFEERVNGRGLVCRGWVPQPRLLAHESVGGFLTHAGWNSIAEGLSRGVTMVLLPLMF 332
LP G EE++ RGL+ WV Q ++L+H ++GGFL+H GWNS+ E + GV ++ P++
Sbjct: 726 LPSGMEEKIKDRGLIVSEWVDQRQILSHRAIGGFLSHCGWNSVLESVVAGVPILAWPMIA 547
Query: 333 DQGLNARLLMD 365
+Q LNA+L++D
Sbjct: 546 EQSLNAKLMVD 514
Score = 54.7 bits (113), Expect(2) = 4e-029
Identities = 20/44 (45%), Positives = 30/44 (68%)
Frame = +3 / -1
Query: 3 SVVYAAFGSEAKLTSAQLQTIALGLEASGLPFLWAFRPPADAAP 134
SV+Y +FG++A ++ +QL +A GLE SG PF+W R A + P
Sbjct: 852 SVIYVSFGTQADVSDSQLDEVAFGLEESGFPFVWVVRSKAWSLP 721
>gb|DT480509.1|DT480509 WS02529.BR_B22 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02529_B22 5', mRNA sequence
Length = 798
Score = 93.2 bits (197), Expect(2) = 4e-029
Identities = 32/71 (45%), Positives = 51/71 (71%)
Frame = +3 / +2
Query: 153 LPEGFEERVNGRGLVCRGWVPQPRLLAHESVGGFLTHAGWNSIAEGLSRGVTMVLLPLMF 332
LP G EE++ RGL+ WV Q ++L+H ++GGFL+H GWNS+ E + GV ++ P++
Sbjct: 314 LPSGMEEKIKDRGLIVSEWVDQRQILSHRAIGGFLSHCGWNSVLESVVAGVPILAWPMIA 493
Query: 333 DQGLNARLLMD 365
+Q LNA+L++D
Sbjct: 494 EQSLNAKLIVD 526
Score = 54.7 bits (113), Expect(2) = 4e-029
Identities = 20/44 (45%), Positives = 30/44 (68%)
Frame = +3 / +2
Query: 3 SVVYAAFGSEAKLTSAQLQTIALGLEASGLPFLWAFRPPADAAP 134
SV+Y +FG++A ++ +QL +A GLE SG PF+W R A + P
Sbjct: 188 SVIYVSFGTQADVSDSQLDEVAFGLEESGFPFVWVVRSKAWSLP 319
>gb|CN517813.1|CN517813 GQ0094.B3_C03 GQ009 Populus trichocarpa x Populus deltoides cDNA
clone GQ0094_C03 5', mRNA sequence
Length = 319
Score = 127 bits (272), Expect = 7e-029
Identities = 49/98 (50%), Positives = 69/98 (70%)
Frame = +3 / -2
Query: 171 ERVNGRGLVCRGWVPQPRLLAHESVGGFLTHAGWNSIAEGLSRGVTMVLLPLMFDQGLNA 350
ERV GRG+V W P R++AHESVGGFLTH G++S+ E LS G+ +++LP DQGL A
Sbjct: 306 ERVKGRGVVXTSWAPXLRIMAHESVGGFLTHCGYSSVIEALSFGLALIMLPFAIDQGLIA 127
Query: 351 RLLMDKKIGIEVERNEDDGTFAPKDIADALRTAMAENQ 464
R+ KK+GIEV R+E DG+F +A++LR + + +
Sbjct: 126 RVFEGKKVGIEVPRDEQDGSFTRNSVAESLRLVIXDKE 13
>gb|CX658962.1|CX658962 PO01024F10 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO01024F10 5', mRNA sequence
Length = 686
Score = 86.8 bits (183), Expect(2) = 8e-029
Identities = 33/59 (55%), Positives = 40/59 (67%)
Frame = +3 / +2
Query: 153 LPEGFEERVNGRGLVCRGWVPQPRLLAHESVGGFLTHAGWNSIAEGLSRGVTMVLLPLM 329
LP GF ER + RG+VC GW PQ +L H SVGG L H+GW SI E L G T++LLP +
Sbjct: 506 LPSGFGERTSNRGIVCMGWAPQMEILGHPSVGGSLFHSGWGSIIETLQFGHTLILLPFI 682
Score = 60.2 bits (125), Expect(2) = 8e-029
Identities = 26/39 (66%), Positives = 28/39 (71%)
Frame = +3 / +2
Query: 3 SVVYAAFGSEAKLTSAQLQTIALGLEASGLPFLWAFRPP 119
SVV+ FGSE KLT Q+ IA GLE SGLPFLWA R P
Sbjct: 362 SVVFVGFGSEYKLTRDQVYEIAHGLELSGLPFLWALRKP 478
>gb|DV465576.1|DV465576 MTUNUL1.P40.D07 NUL Populus fremontii x Populus angustifolia cDNA,
mRNA sequence
Length = 759
Score = 89.0 bits (188), Expect(2) = 3e-028
Identities = 32/55 (58%), Positives = 44/55 (80%)
Frame = +3 / -2
Query: 153 LPEGFEERVNGRGLVCRGWVPQPRLLAHESVGGFLTHAGWNSIAEGLSRGVTMVL 317
LP+GF+ERV GRG+V W PQ R++AHESVGGFLTH G++S+ E LS G+ +++
Sbjct: 200 LPDGFDERVKGRGVVWTSWAPQLRIMAHESVGGFLTHCGYSSVIEALSFGLALIM 36
Score = 56.1 bits (116), Expect(2) = 3e-028
Identities = 23/42 (54%), Positives = 28/42 (66%)
Frame = +3 / -2
Query: 3 SVVYAAFGSEAKLTSAQLQTIALGLEASGLPFLWAFRPPADA 128
SVVY AFGSE + ++ +ALGLE SGLPF WA R D+
Sbjct: 332 SVVYIAFGSELTINQDEITELALGLELSGLPFFWALRNQDDS 207
>gb|CV245251.1|CV245251 WS0256.B21_O06 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS0256_O06 3', mRNA sequence
Length = 903
Score = 95.9 bits (203), Expect(2) = 4e-028
Identities = 36/71 (50%), Positives = 48/71 (67%)
Frame = +3 / -2
Query: 153 LPEGFEERVNGRGLVCRGWVPQPRLLAHESVGGFLTHAGWNSIAEGLSRGVTMVLLPLMF 332
LPEGF ER+ G GL+ RGW PQ +L HE++G F+TH GWNS EG++ G MV P+
Sbjct: 581 LPEGFGERMEGVGLIIRGWAPQVLILDHEAIGAFVTHCGWNSTLEGITAGKPMVTWPIFA 402
Query: 333 DQGLNARLLMD 365
+Q N +L+ D
Sbjct: 401 EQFYNEKLVTD 369
Score = 48.7 bits (100), Expect(2) = 4e-028
Identities = 20/37 (54%), Positives = 24/37 (64%)
Frame = +3 / -2
Query: 3 SVVYAAFGSEAKLTSAQLQTIALGLEASGLPFLWAFR 113
SVVY FGS + +QL+ IA GLEASG F+W R
Sbjct: 728 SVVYICFGSTTNFSDSQLKEIAAGLEASGQQFIWVVR 618
>gb|CV283727.1|CV283727 WS0188.B21_B24 PTxD-IL-N-A-9 Populus trichocarpa x Populus
deltoides cDNA clone WS0188_B24 3', mRNA sequence
Length = 885
Score = 93.2 bits (197), Expect(2) = 4e-028
Identities = 37/71 (52%), Positives = 46/71 (64%)
Frame = +3 / -2
Query: 153 LPEGFEERVNGRGLVCRGWVPQPRLLAHESVGGFLTHAGWNSIAEGLSRGVTMVLLPLMF 332
LPEGF +R G GLV W PQ +L+H S GGFLTH GWNSI E + GV ++ PL
Sbjct: 584 LPEGFLDRTKGVGLVVPSWAPQIEVLSHSSTGGFLTHCGWNSILESIVNGVPLIAWPLYA 405
Query: 333 DQGLNARLLMD 365
+Q +N+ LL D
Sbjct: 404 EQKMNSVLLAD 372
Score = 51.5 bits (106), Expect(2) = 4e-028
Identities = 22/43 (51%), Positives = 28/43 (65%)
Frame = +3 / -2
Query: 3 SVVYAAFGSEAKLTSAQLQTIALGLEASGLPFLWAFRPPADAA 131
SV++ +FGS L+ AQL ++LGLE SG FLW R P D A
Sbjct: 764 SVLFISFGSGGTLSHAQLNELSLGLEMSGQRFLWVVRSPHDEA 636
>gb|DT512168.1|DT512168 WS02418.B21_I18 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02418_I18 3', mRNA sequence
Length = 843
Score = 95.9 bits (203), Expect(2) = 4e-028
Identities = 36/71 (50%), Positives = 48/71 (67%)
Frame = +3 / -3
Query: 153 LPEGFEERVNGRGLVCRGWVPQPRLLAHESVGGFLTHAGWNSIAEGLSRGVTMVLLPLMF 332
LPEGF ER+ G GL+ RGW PQ +L HE++G F+TH GWNS EG++ G MV P+
Sbjct: 580 LPEGFGERMEGVGLIIRGWAPQVLILDHEAIGAFVTHCGWNSTLEGITAGKPMVTWPIFA 401
Query: 333 DQGLNARLLMD 365
+Q N +L+ D
Sbjct: 400 EQFYNEKLVTD 368
Score = 48.7 bits (100), Expect(2) = 4e-028
Identities = 20/37 (54%), Positives = 24/37 (64%)
Frame = +3 / -3
Query: 3 SVVYAAFGSEAKLTSAQLQTIALGLEASGLPFLWAFR 113
SVVY FGS + +QL+ IA GLEASG F+W R
Sbjct: 727 SVVYICFGSTTNFSDSQLKEIAAGLEASGQQFIWVVR 617
>gb|DT515014.1|DT515014 WS02426.B21_G13 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02426_G13 3', mRNA sequence
Length = 907
Score = 99.6 bits (211), Expect(2) = 7e-028
Identities = 36/71 (50%), Positives = 51/71 (71%)
Frame = +3 / -1
Query: 153 LPEGFEERVNGRGLVCRGWVPQPRLLAHESVGGFLTHAGWNSIAEGLSRGVTMVLLPLMF 332
LPEGFE R+ G+GL+ RGW PQ +L H++VGGF+TH GWNS E ++ G+ +V PL
Sbjct: 613 LPEGFERRMEGKGLIIRGWAPQVLILDHKAVGGFMTHCGWNSTLEAVTAGLPLVTWPLYA 434
Query: 333 DQGLNARLLMD 365
+Q +N +L+ D
Sbjct: 433 EQFVNEKLITD 401
Score = 44.1 bits (90), Expect(2) = 7e-028
Identities = 19/37 (51%), Positives = 24/37 (64%)
Frame = +3 / -1
Query: 3 SVVYAAFGSEAKLTSAQLQTIALGLEASGLPFLWAFR 113
SV+Y FG+ +AQL+ IAL LEASG F+W R
Sbjct: 763 SVLYICFGTLLDFPAAQLREIALALEASGQNFIWVVR 653
>gb|CX180458.1|CX180458 E02_45-44_10.ab1 leaf inoculated with Marssonia pathogen of Populus
euramericana Populus x canadensis cDNA, mRNA sequence
Length = 632
Score = 98.7 bits (209), Expect(2) = 7e-028
Identities = 35/68 (51%), Positives = 50/68 (73%)
Frame = +3 / +1
Query: 162 GFEERVNGRGLVCRGWVPQPRLLAHESVGGFLTHAGWNSIAEGLSRGVTMVLLPLMFDQG 341
GF+ER GRGL+ +GW PQ +L+H ++G FLTH GWNS+ EG+S G+ MV PL+ DQ
Sbjct: 400 GFKERTKGRGLIIQGWAPQVAILSHSAIGSFLTHCGWNSVLEGISAGLPMVTWPLIGDQF 579
Query: 342 LNARLLMD 365
N +L+++
Sbjct: 580 CNEKLVVE 603
Score = 45.1 bits (92), Expect(2) = 7e-028
Identities = 18/37 (48%), Positives = 22/37 (59%)
Frame = +3 / +1
Query: 3 SVVYAAFGSEAKLTSAQLQTIALGLEASGLPFLWAFR 113
SV+Y GS L + QL + LGLEAS PF+W R
Sbjct: 244 SVIYVCLGSLCNLITLQLMELGLGLEASNKPFIWVTR 354
>gb|CV256857.1|CV256857 WS0244.B21_P21 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS0244_P21 3', mRNA sequence
Length = 863
Score = 97.7 bits (207), Expect(2) = 1e-027
Identities = 35/69 (50%), Positives = 49/69 (71%)
Frame = +3 / -3
Query: 159 EGFEERVNGRGLVCRGWVPQPRLLAHESVGGFLTHAGWNSIAEGLSRGVTMVLLPLMFDQ 338
E FEER+ GRGL+ +GW PQ +L+H ++GGFLTH GWNS EG+ GV M+ P +Q
Sbjct: 633 EKFEERIKGRGLLIKGWAPQVLILSHRAIGGFLTHCGWNSTVEGICSGVPMITWPQFSEQ 454
Query: 339 GLNARLLMD 365
LN +L+++
Sbjct: 453 FLNEKLIVE 427
Score = 45.1 bits (92), Expect(2) = 1e-027
Identities = 18/37 (48%), Positives = 24/37 (64%)
Frame = +3 / -3
Query: 3 SVVYAAFGSEAKLTSAQLQTIALGLEASGLPFLWAFR 113
SV+YA GS +L +QL + LGLEAS PF+W +
Sbjct: 786 SVIYACLGSLCRLVPSQLIELGLGLEASKQPFIWVVK 676
>gb|CK317829.1|CK317829 B9P02c09 Populus stem seasonal library Populus deltoides cDNA, mRNA
sequence
Length = 631
Score = 105 bits (223), Expect(3) = 2e-027
Identities = 40/83 (48%), Positives = 57/83 (68%)
Frame = +3 / +2
Query: 153 LPEGFEERVNGRGLVCRGWVPQPRLLAHESVGGFLTHAGWNSIAEGLSRGVTMVLLPLMF 332
LP F + + +G+V GW PQ LL+H S+GG L H+GW S+ E L G +++LP +
Sbjct: 74 LPPEFNNKTSEKGIVSIGWAPQLELLSHPSIGGSLFHSGWGSVIETLQYGHCLIVLPFIA 253
Query: 333 DQGLNARLLMDKKIGIEVERNED 401
DQGLNARLL++K + +EV+R ED
Sbjct: 254 DQGLNARLLVEKGLAVEVDRKED 322
Score = 28.1 bits (55), Expect(3) = 2e-027
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = +3 / +2
Query: 78 EASGLPFLWAFRPPADAA 131
E S LPFLWA R P AA
Sbjct: 5 ELSKLPFLWALRKPNWAA 58
Score = 27.2 bits (53), Expect(3) = 2e-027
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +3 / +2
Query: 396 EDDGTFAPKDIADALRTAMAENQ 464
++DG+F DIA +LR AM ++
Sbjct: 314 KEDGSFTRHDIAKSLRLAMVSDE 382
>gb|CK318694.1|CK318694 X9P02d02 Populus stem seasonal library Populus deltoides cDNA, mRNA
sequence
Length = 617
Score = 105 bits (223), Expect(3) = 2e-027
Identities = 40/83 (48%), Positives = 57/83 (68%)
Frame = +3 / +2
Query: 153 LPEGFEERVNGRGLVCRGWVPQPRLLAHESVGGFLTHAGWNSIAEGLSRGVTMVLLPLMF 332
LP F + + +G+V GW PQ LL+H S+GG L H+GW S+ E L G +++LP +
Sbjct: 74 LPPEFNNKTSEKGIVSIGWAPQLELLSHPSIGGSLFHSGWGSVIETLQYGHCLIVLPFIA 253
Query: 333 DQGLNARLLMDKKIGIEVERNED 401
DQGLNARLL++K + +EV+R ED
Sbjct: 254 DQGLNARLLVEKGLAVEVDRKED 322
Score = 28.1 bits (55), Expect(3) = 2e-027
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = +3 / +2
Query: 78 EASGLPFLWAFRPPADAA 131
E S LPFLWA R P AA
Sbjct: 5 ELSKLPFLWALRKPNWAA 58
Score = 27.2 bits (53), Expect(3) = 2e-027
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +3 / +2
Query: 396 EDDGTFAPKDIADALRTAMAENQ 464
++DG+F DIA +LR AM ++
Sbjct: 314 KEDGSFTRHDIAKSLRLAMVSDE 382
>gb|CK096354.1|CK096354 UB11CPF06.3pR Populus active cambium cDNA library Populus tremula
cDNA clone UB11CPF06 3', mRNA sequence
Length = 852
Score = 91.8 bits (194), Expect(2) = 3e-027
Identities = 41/111 (36%), Positives = 57/111 (51%)
Frame = +3 / -2
Query: 153 LPEGFEERVNGRGLVCRGWVPQPRLLAHESVGGFLTHAGWNSIAEGLSRGVTMVLLPLMF 332
LPEGF ER RG + W PQ +L H SVGGF+TH GWNS+ E L GV MV PL
Sbjct: 554 LPEGFLERTTDRGFLVNSWAPQGEILNHGSVGGFVTHCGWNSLLEALCAGVPMVAWPLYA 375
Query: 333 DQGLNARLLMDKKIGIEVERNEDDGTFAPKDIADALRTAMAENQDGTRVKE 485
+Q +N ++++ R +D F + + ++ G V+E
Sbjct: 374 EQRMNRIFMVEEMKVALAFREAEDDQFVNAAEVEERVIELMNSKKGEAVRE 222
Score = 50.1 bits (103), Expect(2) = 3e-027
Identities = 20/39 (51%), Positives = 26/39 (66%)
Frame = +3 / -2
Query: 3 SVVYAAFGSEAKLTSAQLQTIALGLEASGLPFLWAFRPP 119
SV++ FGS +S QL+ A+GLE SG+ FLW RPP
Sbjct: 728 SVLFLCFGSMGVFSSRQLRETAIGLEKSGVRFLWVVRPP 612
>gb|CK090560.1|CK090560 F013P59.3pR Populus flower cDNA library Populus trichocarpa cDNA
clone F013P59 3', mRNA sequence
Length = 815
Score = 100 bits (214), Expect(2) = 3e-027
Identities = 37/69 (53%), Positives = 49/69 (71%)
Frame = +3 / -1
Query: 153 LPEGFEERVNGRGLVCRGWVPQPRLLAHESVGGFLTHAGWNSIAEGLSRGVTMVLLPLMF 332
LPEGFEER+ +GL+ RGW PQ +L HE++GGF+TH GWNS EG++ GV M PL
Sbjct: 629 LPEGFEERMGDKGLIIRGWAPQVLILDHEAIGGFVTHCGWNSTVEGIAAGVPMATCPLSA 450
Query: 333 DQGLNARLL 359
+Q N +L+
Sbjct: 449 EQFYNEKLV 423
Score = 40.5 bits (82), Expect(2) = 3e-027
Identities = 16/28 (57%), Positives = 21/28 (75%)
Frame = +3 / -1
Query: 21 FGSEAKLTSAQLQTIALGLEASGLPFLW 104
FGS A +++QL+ IA GLEASG F+W
Sbjct: 758 FGSMASFSASQLKEIATGLEASGQQFIW 675
>gb|CV272744.1|CV272744 WS0158.B21_J05 PTxN-IB-A-6 Populus trichocarpa x Populus nigra cDNA
clone WS0158_J05 3', mRNA sequence
Length = 919
Score = 90.9 bits (192), Expect(2) = 6e-027
Identities = 36/72 (50%), Positives = 45/72 (62%)
Frame = +3 / -2
Query: 153 LPEGFEERVNGRGLVCRGWVPQPRLLAHESVGGFLTHAGWNSIAEGLSRGVTMVLLPLMF 332
LPEGF ER RG + W PQ +L H SVGGF+TH GWNS+ E L GV MV PL
Sbjct: 612 LPEGFLERTQDRGFLVNSWAPQVEILNHGSVGGFVTHCGWNSVLEALCAGVPMVAWPLYA 433
Query: 333 DQGLNARLLMDK 368
+Q +N L+++
Sbjct: 432 EQRMNRIFLVEE 397
Score = 49.6 bits (102), Expect(2) = 6e-027
Identities = 20/39 (51%), Positives = 25/39 (64%)
Frame = +3 / -2
Query: 3 SVVYAAFGSEAKLTSAQLQTIALGLEASGLPFLWAFRPP 119
SV++ FGS S QL+ A+GLE SG+ FLW RPP
Sbjct: 795 SVLFLCFGSMGVFNSRQLRETAIGLEKSGVRFLWVVRPP 679
>gb|DT481540.1|DT481540 WS02532.BR_C15 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02532_C15 5', mRNA sequence
Length = 873
Score = 120 bits (257), Expect = 8e-027
Identities = 44/90 (48%), Positives = 61/90 (67%)
Frame = +3 / +3
Query: 6 VVYAAFGSEAKLTSAQLQTIALGLEASGLPFLWAFRPPADAAPGQGTGGLPEGFEERVNG 185
VVY +G++ LT Q++ +A GLE SG+ F+W + P+ G+G +P GFE+RV G
Sbjct: 603 VVYVCYGTQVVLTKDQVEAVASGLEKSGVHFIWCVKQPSKEHVGEGYSMIPSGFEDRVAG 782
Query: 186 RGLVCRGWVPQPRLLAHESVGGFLTHAGWN 275
RGL+ RGW PQ +L+H +VG FLTH GWN
Sbjct: 783 RGLIIRGWAPQVWILSHRAVGAFLTHCGWN 872
>gb|DT485768.1|DT485768 WS02529.B21_B22 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02529_B22 3', mRNA sequence
Length = 825
Score = 93.2 bits (197), Expect(2) = 1e-026
Identities = 32/71 (45%), Positives = 51/71 (71%)
Frame = +3 / -2
Query: 153 LPEGFEERVNGRGLVCRGWVPQPRLLAHESVGGFLTHAGWNSIAEGLSRGVTMVLLPLMF 332
LP G EE++ RGL+ WV Q ++L+H ++GGFL+H GWNS+ E + GV ++ P++
Sbjct: 713 LPSGMEEKIKDRGLIVSEWVDQRQILSHRAIGGFLSHCGWNSVLESVVAGVPILAWPMIA 534
Query: 333 DQGLNARLLMD 365
+Q LNA+L++D
Sbjct: 533 EQSLNAKLIVD 501
Score = 46.4 bits (95), Expect(2) = 1e-026
Identities = 17/39 (43%), Positives = 26/39 (66%)
Frame = +3 / -2
Query: 18 AFGSEAKLTSAQLQTIALGLEASGLPFLWAFRPPADAAP 134
+FG++A ++ +QL +A GLE SG PF+W R A + P
Sbjct: 824 SFGTQADVSDSQLDEVAFGLEESGFPFVWVVRSKAWSLP 708
>gb|CV253317.1|CV253317 WS0221.B21_I23 PTxD-ICC-A-12 Populus trichocarpa x Populus
deltoides cDNA clone WS0221_I23 3', mRNA sequence
Length = 737
Score = 95.9 bits (203), Expect(2) = 2e-026
Identities = 36/71 (50%), Positives = 48/71 (67%)
Frame = +3 / -3
Query: 153 LPEGFEERVNGRGLVCRGWVPQPRLLAHESVGGFLTHAGWNSIAEGLSRGVTMVLLPLMF 332
LPEGF ER+ G GL+ RGW PQ +L HE++G F+TH GWNS EG++ G MV P+
Sbjct: 591 LPEGFGERMEGVGLIIRGWAPQVLILDHEAIGAFVTHCGWNSTLEGITAGKPMVTWPIFA 412
Query: 333 DQGLNARLLMD 365
+Q N +L+ D
Sbjct: 411 EQFYNEKLVTD 379
Score = 43.2 bits (88), Expect(2) = 2e-026
Identities = 18/36 (50%), Positives = 22/36 (61%)
Frame = +3 / -3
Query: 6 VVYAAFGSEAKLTSAQLQTIALGLEASGLPFLWAFR 113
VVY F S + +QL+ IA GLEASG F+W R
Sbjct: 735 VVYICFESTTNFSDSQLKEIAAGLEASGQQFIWVVR 628
>gb|BU864403.1|BU864403 S039H12 Populus imbibed seed cDNA library Populus tremula cDNA 5
prime, mRNA sequence
Length = 616
Score = 89.0 bits (188), Expect(2) = 3e-026
Identities = 35/71 (49%), Positives = 47/71 (66%)
Frame = +3 / +1
Query: 156 PEGFEERVNGRGLVCRGWVPQPRLLAHESVGGFLTHAGWNSIAEGLSRGVTMVLLPLMFD 335
P+GF ER RGLV + W PQ ++L H S+GGF+TH GWNS E + GV MV PL +
Sbjct: 358 PDGFLERTKERGLVVKLWAPQVKILNHSSIGGFVTHCGWNSTLEAVCAGVPMVAWPLYAE 537
Query: 336 QGLNARLLMDK 368
Q LN +L+++
Sbjct: 538 QRLNRVVLVEE 570
Score = 49.2 bits (101), Expect(2) = 3e-026
Identities = 22/39 (56%), Positives = 24/39 (61%)
Frame = +3 / +1
Query: 3 SVVYAAFGSEAKLTSAQLQTIALGLEASGLPFLWAFRPP 119
SVV+ FGS LT QL IA+GLE SG FLW R P
Sbjct: 178 SVVFLCFGSLGLLTKEQLSEIAIGLEKSGQRFLWVVRNP 294
>gb|DT481513.1|DT481513 WS02532.BR_B09 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02532_B09 5', mRNA sequence
Length = 688
Score = 78.0 bits (164), Expect(3) = 3e-026
Identities = 32/69 (46%), Positives = 45/69 (65%)
Frame = +3 / -2
Query: 153 LPEGFEERVNGRGLVCRGWVPQPRLLAHESVGGFLTHAGWNSIAEGLSRGVTMVLLPLMF 332
LP F ERV GRG++ GWV Q +LAH SVG ++ H+G++S+ E L + +LPL
Sbjct: 291 LPSSFLERVKGRGVLHTGWVQQQLILAHSSVGCYVCHSGFSSLIEALVNDCQLAMLPLKG 112
Query: 333 DQGLNARLL 359
DQ LN +L+
Sbjct: 111 DQFLNTKLI 85
Score = 45.1 bits (92), Expect(3) = 3e-026
Identities = 18/41 (43%), Positives = 26/41 (63%)
Frame = +3 / -2
Query: 3 SVVYAAFGSEAKLTSAQLQTIALGLEASGLPFLWAFRPPAD 125
SV++ +FGSE L Q++ + LGLE +GLPF PA+
Sbjct: 444 SVIFCSFGSETFLNHDQIKELVLGLELTGLPFFLVLNFPAE 322
Score = 32.7 bits (65), Expect(3) = 3e-026
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +3 / -2
Query: 363 DKKIGIEVERNEDDGTFAPKDIADAL 440
D K G+E+ R ++DG F DI +A+
Sbjct: 78 DLKAGVEINRRDEDGYFGKDDICEAV 1
>gb|DT486843.1|DT486843 WS02532.B21_B09 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02532_B09 3', mRNA sequence
Length = 688
Score = 78.0 bits (164), Expect(3) = 3e-026
Identities = 32/69 (46%), Positives = 45/69 (65%)
Frame = +3 / +2
Query: 153 LPEGFEERVNGRGLVCRGWVPQPRLLAHESVGGFLTHAGWNSIAEGLSRGVTMVLLPLMF 332
LP F ERV GRG++ GWV Q +LAH SVG ++ H+G++S+ E L + +LPL
Sbjct: 398 LPSSFLERVKGRGVLHTGWVQQQLILAHSSVGCYVCHSGFSSLIEALVNDCQLAMLPLKG 577
Query: 333 DQGLNARLL 359
DQ LN +L+
Sbjct: 578 DQFLNTKLI 604
Score = 45.1 bits (92), Expect(3) = 3e-026
Identities = 18/41 (43%), Positives = 26/41 (63%)
Frame = +3 / +2
Query: 3 SVVYAAFGSEAKLTSAQLQTIALGLEASGLPFLWAFRPPAD 125
SV++ +FGSE L Q++ + LGLE +GLPF PA+
Sbjct: 245 SVIFCSFGSETFLNHDQIKELVLGLELTGLPFFLVLNFPAE 367
Score = 32.7 bits (65), Expect(3) = 3e-026
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +3 / +2
Query: 363 DKKIGIEVERNEDDGTFAPKDIADAL 440
D K G+E+ R ++DG F DI +A+
Sbjct: 611 DLKAGVEINRRDEDGYFGKDDICEAV 688
>gb|DT488655.1|DT488655 WS02537.B21_A19 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02537_A19 3', mRNA sequence
Length = 804
Score = 87.2 bits (184), Expect(2) = 4e-026
Identities = 35/81 (43%), Positives = 51/81 (62%)
Frame = +3 / -3
Query: 3 SVVYAAFGSEAKLTSAQLQTIALGLEASGLPFLWAFRPPADAAPGQGTGGLPEGFEERVN 182
SV+Y FGS+ L Q++ +A GLE S + F+W + G G +P+GF+ER+
Sbjct: 778 SVLYFCFGSQKLLNKKQMEALADGLEKSMVRFIWVVKTGTAQQVEDGYGVVPDGFDERLA 599
Query: 183 GRGLVCRGWVPQPRLLAHESV 245
GRGLV RGW PQ ++L+H +V
Sbjct: 598 GRGLVIRGWAPQVKILSHRAV 536
Score = 50.6 bits (104), Expect(2) = 4e-026
Identities = 19/44 (43%), Positives = 30/44 (68%)
Frame = +3 / -1
Query: 237 ESVGGFLTHAGWNSIAEGLSRGVTMVLLPLMFDQGLNARLLMDK 368
E G FL+H GWNS+ EG+ G ++ P+ DQ ++ARLL+++
Sbjct: 543 ERCGWFLSHCGWNSMLEGIVAGAMILAWPMEADQFIDARLLVEE 412
>gb|CF229053.1|CF229053 PtaXM0020F3F0311 Poplar cDNA library from mature xylem Populus alba
x Populus tremula cDNA 5', mRNA sequence
Length = 747
Score = 88.1 bits (186), Expect(2) = 3e-025
Identities = 35/69 (50%), Positives = 45/69 (65%)
Frame = +3 / +2
Query: 153 LPEGFEERVNGRGLVCRGWVPQPRLLAHESVGGFLTHAGWNSIAEGLSRGVTMVLLPLMF 332
LP+GF +R G+GLV W PQ ++L+H S GGFLTH GWNS E + GV ++ PL
Sbjct: 227 LPKGFLDRTKGQGLVVPSWAPQIQVLSHGSTGGFLTHCGWNSTLESVVHGVPLIAWPLYA 406
Query: 333 DQGLNARLL 359
+Q NA LL
Sbjct: 407 EQXTNAVLL 433
Score = 46.9 bits (96), Expect(2) = 3e-025
Identities = 20/43 (46%), Positives = 27/43 (62%)
Frame = +3 / +2
Query: 3 SVVYAAFGSEAKLTSAQLQTIALGLEASGLPFLWAFRPPADAA 131
SV+Y +FGS L+ QL +A+GLE S FLW R P ++A
Sbjct: 50 SVLYISFGSGGTLSFEQLNELAMGLEISEQKFLWVVRSPDESA 178
>gb|DT505087.1|DT505087 WS01315.B21_P21 PTxD-IL-FL-A-4 Populus trichocarpa x Populus
deltoides cDNA clone WS01315_P21 3', mRNA sequence
Length = 953
Score = 89.5 bits (189), Expect(2) = 5e-025
Identities = 35/72 (48%), Positives = 47/72 (65%)
Frame = +3 / -2
Query: 153 LPEGFEERVNGRGLVCRGWVPQPRLLAHESVGGFLTHAGWNSIAEGLSRGVTMVLLPLMF 332
LPEGF +R RGLV + W PQ +L H SVGGF++H GWNS+ E + GV +V PL
Sbjct: 508 LPEGFLDRTKDRGLVLKSWAPQVAVLNHPSVGGFVSHCGWNSVLEAVCAGVPLVAWPLYA 329
Query: 333 DQGLNARLLMDK 368
+Q LN L+++
Sbjct: 328 EQRLNRIFLVEE 293
Score = 44.6 bits (91), Expect(2) = 5e-025
Identities = 20/39 (51%), Positives = 23/39 (58%)
Frame = +3 / -2
Query: 3 SVVYAAFGSEAKLTSAQLQTIALGLEASGLPFLWAFRPP 119
SVV+ FGS + QL+ IA GLE SG FLW R P
Sbjct: 685 SVVFLCFGSLGLFSKEQLREIAFGLERSGHRFLWVVRNP 569
>gb|CV267405.1|CV267405 WS02031.B21_K13 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02031_K13 3', mRNA sequence
Length = 848
Score = 91.3 bits (193), Expect(2) = 5e-025
Identities = 34/69 (49%), Positives = 47/69 (68%)
Frame = +3 / -1
Query: 153 LPEGFEERVNGRGLVCRGWVPQPRLLAHESVGGFLTHAGWNSIAEGLSRGVTMVLLPLMF 332
LP+GF +R GRGLV W PQ ++L+H S GGFLTH GWNS E + G+ +++ PL
Sbjct: 626 LPKGFLDRTKGRGLVVPSWAPQAQVLSHGSTGGFLTHCGWNSTLESVVNGIPLIVWPLYA 447
Query: 333 DQGLNARLL 359
+Q +NA +L
Sbjct: 446 EQKMNAWML 420
Score = 42.8 bits (87), Expect(2) = 5e-025
Identities = 19/41 (46%), Positives = 25/41 (60%)
Frame = +3 / -1
Query: 3 SVVYAAFGSEAKLTSAQLQTIALGLEASGLPFLWAFRPPAD 125
SV++ +FGS L+ Q+ +ALGLE S FLW R P D
Sbjct: 806 SVLFVSFGSGGTLSFDQITELALGLEMSEQRFLWVARVPND 684
>gb|DT488662.1|DT488662 WS02537.B21_B03 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02537_B03 3', mRNA sequence
Length = 902
Score = 73.0 bits (153), Expect(3) = 5e-025
Identities = 27/49 (55%), Positives = 36/49 (73%)
Frame = +3 / -2
Query: 204 GWVPQPRLLAHESVGGFLTHAGWNSIAEGLSRGVTMVLLPLMFDQGLNA 350
GW PQ +LAH+++GGF++H GWNSI E L GV +V LP+ +Q LNA
Sbjct: 580 GWAPQVEVLAHKAIGGFVSHCGWNSILESLWYGVPIVTLPIYAEQQLNA 434
Score = 45.1 bits (92), Expect(3) = 5e-025
Identities = 18/39 (46%), Positives = 25/39 (64%)
Frame = +3 / -2
Query: 3 SVVYAAFGSEAKLTSAQLQTIALGLEASGLPFLWAFRPP 119
SVV+ FG+ + Q++ IALG+E SG FLW+ R P
Sbjct: 784 SVVFLCFGNFGSFSPLQVKEIALGIEQSGFKFLWSMRFP 668
Score = 33.6 bits (67), Expect(3) = 5e-025
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = +3 / -2
Query: 153 LPEGFEERVNGRGLVC 200
LPEGF ER+ GRG++C
Sbjct: 628 LPEGFLERIEGRGIMC 581
>gb|CV244554.1|CV244554 WS0254.B21_P16 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS0254_P16 3', mRNA sequence
Length = 897
Score = 73.0 bits (153), Expect(3) = 5e-025
Identities = 27/49 (55%), Positives = 36/49 (73%)
Frame = +3 / -2
Query: 204 GWVPQPRLLAHESVGGFLTHAGWNSIAEGLSRGVTMVLLPLMFDQGLNA 350
GW PQ +LAH+++GGF++H GWNSI E L GV +V LP+ +Q LNA
Sbjct: 479 GWAPQVEVLAHKAIGGFVSHCGWNSILESLWYGVPIVTLPIYAEQQLNA 333
Score = 45.1 bits (92), Expect(3) = 5e-025
Identities = 18/39 (46%), Positives = 25/39 (64%)
Frame = +3 / -2
Query: 3 SVVYAAFGSEAKLTSAQLQTIALGLEASGLPFLWAFRPP 119
SVV+ FG+ + Q++ IALG+E SG FLW+ R P
Sbjct: 683 SVVFLCFGNFGSFSPLQVKEIALGIEQSGFKFLWSMRFP 567
Score = 33.6 bits (67), Expect(3) = 5e-025
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = +3 / -2
Query: 153 LPEGFEERVNGRGLVC 200
LPEGF ER+ GRG++C
Sbjct: 527 LPEGFLERIEGRGIMC 480
>gb|CF119195.1|CF119195 MTU10CS.P14.F09 Aspen stem cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 737
Score = 88.1 bits (186), Expect(2) = 7e-025
Identities = 35/69 (50%), Positives = 45/69 (65%)
Frame = +3 / +3
Query: 153 LPEGFEERVNGRGLVCRGWVPQPRLLAHESVGGFLTHAGWNSIAEGLSRGVTMVLLPLMF 332
LP+GF +R G+GLV W PQ ++L+H S GGFLTH GWNS E + GV ++ PL
Sbjct: 447 LPKGFLDRTKGQGLVVPSWAPQIQVLSHGSTGGFLTHCGWNSTLESIVHGVPLIAWPLYA 626
Query: 333 DQGLNARLL 359
+Q NA LL
Sbjct: 627 EQKTNAVLL 653
Score = 45.5 bits (93), Expect(2) = 7e-025
Identities = 20/43 (46%), Positives = 26/43 (60%)
Frame = +3 / +3
Query: 3 SVVYAAFGSEAKLTSAQLQTIALGLEASGLPFLWAFRPPADAA 131
SV+Y +FGS L+ QL +A+GLE S FLW R P +A
Sbjct: 270 SVLYISFGSGGTLSFEQLNELAMGLEISEQKFLWVVRSPDKSA 398
>gb|DT506782.1|DT506782 WS02416.BR_I02 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02416_I02 5', mRNA sequence
Length = 696
Score = 100 bits (212), Expect(2) = 7e-025
Identities = 37/71 (52%), Positives = 49/71 (69%)
Frame = +3 / +3
Query: 153 LPEGFEERVNGRGLVCRGWVPQPRLLAHESVGGFLTHAGWNSIAEGLSRGVTMVLLPLMF 332
LPEGFEER+ G GL+ RGW PQ +L HE++G F+TH GWNS EG++ G MV P+
Sbjct: 117 LPEGFEERMEGMGLIIRGWAPQVLILDHEAIGAFVTHCGWNSTLEGITAGKPMVTWPIFA 296
Query: 333 DQGLNARLLMD 365
+Q N +L+ D
Sbjct: 297 EQFYNEKLVTD 329
Score = 33.6 bits (67), Expect(2) = 7e-025
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +3 / +3
Query: 42 TSAQLQTIALGLEASGLPFLWAFR 113
+ +QL+ IA GLEASG F+W R
Sbjct: 9 SDSQLKEIAAGLEASGQQFIWVVR 80
>gb|DT511451.1|DT511451 WS02416.B21_I02 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02416_I02 3', mRNA sequence
Length = 696
Score = 100 bits (212), Expect(2) = 7e-025
Identities = 37/71 (52%), Positives = 49/71 (69%)
Frame = +3 / -3
Query: 153 LPEGFEERVNGRGLVCRGWVPQPRLLAHESVGGFLTHAGWNSIAEGLSRGVTMVLLPLMF 332
LPEGFEER+ G GL+ RGW PQ +L HE++G F+TH GWNS EG++ G MV P+
Sbjct: 580 LPEGFEERMEGMGLIIRGWAPQVLILDHEAIGAFVTHCGWNSTLEGITAGKPMVTWPIFA 401
Query: 333 DQGLNARLLMD 365
+Q N +L+ D
Sbjct: 400 EQFYNEKLVTD 368
Score = 33.6 bits (67), Expect(2) = 7e-025
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +3 / -3
Query: 42 TSAQLQTIALGLEASGLPFLWAFR 113
+ +QL+ IA GLEASG F+W R
Sbjct: 688 SDSQLKEIAAGLEASGQQFIWVVR 617
>gb|CK091692.1|CK091692 F118P83.3pR Populus flower cDNA library Populus trichocarpa cDNA
clone F118P83 3', mRNA sequence
Length = 863
Score = 88.1 bits (186), Expect(2) = 1e-024
Identities = 34/72 (47%), Positives = 47/72 (65%)
Frame = +3 / -3
Query: 153 LPEGFEERVNGRGLVCRGWVPQPRLLAHESVGGFLTHAGWNSIAEGLSRGVTMVLLPLMF 332
LPEGF +R RGLV + W PQ +L H SVGGF++H GWNS+ E + GV +V PL
Sbjct: 513 LPEGFLDRTKDRGLVLKSWAPQVAVLNHPSVGGFVSHCGWNSVLEAVCAGVPLVAWPLYA 334
Query: 333 DQGLNARLLMDK 368
+Q +N L+++
Sbjct: 333 EQRVNRIFLVEE 298
Score = 44.6 bits (91), Expect(2) = 1e-024
Identities = 20/39 (51%), Positives = 23/39 (58%)
Frame = +3 / -3
Query: 3 SVVYAAFGSEAKLTSAQLQTIALGLEASGLPFLWAFRPP 119
SVV+ FGS + QL+ IA GLE SG FLW R P
Sbjct: 690 SVVFLCFGSLGLFSKEQLREIAFGLERSGHRFLWVVRNP 574
>gb|DT511146.1|DT511146 WS02429.BR_K23 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02429_K23 5', mRNA sequence
Length = 764
Score = 112 bits (240), Expect = 2e-024
Identities = 43/83 (51%), Positives = 57/83 (68%)
Frame = +3 / +1
Query: 153 LPEGFEERVNGRGLVCRGWVPQPRLLAHESVGGFLTHAGWNSIAEGLSRGVTMVLLPLMF 332
LP GF + + RG+VC GW PQP +LAH ++GG L H+GW SI E LS L+P++
Sbjct: 34 LPTGFSDSTSDRGIVCLGWAPQPEILAHPAIGGCLLHSGWGSIIESLSYWHPQKLMPMVA 213
Query: 333 DQGLNARLLMDKKIGIEVERNED 401
DQGLNA+LL +K G +V+ NED
Sbjct: 214 DQGLNAKLLFEKGNGFQVQSNED 282
>gb|DT515845.1|DT515845 WS02429.B21.1_K23 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02429_K23 3', mRNA sequence
Length = 763
Score = 112 bits (240), Expect = 2e-024
Identities = 43/83 (51%), Positives = 57/83 (68%)
Frame = +3 / -1
Query: 153 LPEGFEERVNGRGLVCRGWVPQPRLLAHESVGGFLTHAGWNSIAEGLSRGVTMVLLPLMF 332
LP GF + + RG+VC GW PQP +LAH ++GG L H+GW SI E LS L+P++
Sbjct: 730 LPTGFSDSTSDRGIVCLGWAPQPEILAHPAIGGCLLHSGWGSIIESLSYWHPQKLMPMVA 551
Query: 333 DQGLNARLLMDKKIGIEVERNED 401
DQGLNA+LL +K G +V+ NED
Sbjct: 550 DQGLNAKLLFEKGNGFQVQSNED 482
Database: Populus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:49 PM
Number of letters in database: 203,408,664
Number of sequences in database: 369,679
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 309,105,108
Number of Sequences: 369679
Number of extensions: 4407897
Number of successful extensions: 52177
Number of sequences better than 1.0e-020: 92
length of database: 67,802,888
effective HSP length: 51
effective length of database: 48,949,259
effective search space used: 8272424771
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)