TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3748380.2.1
(1272 letters)
Database: Populus_nucl_with_EST.fasta
369,679 sequences; 203,408,664 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AY615966.1| Populus balsamifera subsp. trichocarpa APETA... 274 1e-072
gb|AY615964.1| Populus balsamifera subsp. trichocarpa APETA... 271 7e-072
gb|AF034093.2| Populus tremuloides PTM1 mRNA, complete cds 270 1e-071
gb|AF034094.2| Populus tremuloides PTM2 mRNA, complete cds 264 1e-069
gb|DV466358.1|DV466358 MTUNUL1.P5.F01 NUL Populus fremontii... 165 3e-069
gb|BU872670.1|BU872670 Q045E11 Populus flower cDNA library ... 163 7e-068
gb|DV466538.1|DV466538 MTUNUL1.P6.H12 NUL Populus fremontii... 165 2e-067
gb|BU868189.1|BU868189 M112C09 Populus flower cDNA library ... 165 4e-065
gb|AY615965.1| Populus balsamifera subsp. trichocarpa APETA... 243 3e-063
gb|AY515153.1| Populus deltoides APETALA-like protein AP1 m... 233 2e-060
gb|CV262641.1|CV262641 WS0202.B21_B22 PTxN-IB-N-A-11 Populu... 118 5e-058
gb|DN494603.1|DN494603 M112C09.5pR Populus female catkins c... 165 1e-051
gb|DT499735.1|DT499735 WS9991.BR_D06 PT-P-FL-A-2 Populus tr... 165 4e-051
gb|BI136216.1|BI136216 F065P15Y Populus flower cDNA library... 200 2e-050
gb|BI137078.1|BI137078 F079P74Y Populus flower cDNA library... 200 2e-050
gb|BI137178.1|BI137178 F081P53Y Populus flower cDNA library... 200 2e-050
gb|BI137201.1|BI137201 F082P13Y Populus flower cDNA library... 196 2e-049
gb|BI136301.1|BI136301 F066P33Y Populus flower cDNA library... 191 7e-048
gb|BU876142.1|BU876142 V016F11 Populus flower cDNA library ... 136 2e-046
gb|DT511195.1|DT511195 WS02429.BR_M24 PTxD-ICC-N-A-14 Popul... 138 4e-046
gb|DN500995.1|DN500995 UM45TD08.5pR Populus female catkins ... 137 4e-046
gb|AY235222.1| Populus tremuloides SEP3-related MADS-box pr... 136 1e-045
gb|BI136881.1|BI136881 F075P93Y Populus flower cDNA library... 181 1e-044
gb|BI136255.1|BI136255 F065P62Y Populus flower cDNA library... 171 1e-041
gb|DN501305.1|DN501305 UM83TF04.5pR Populus female catkins ... 171 1e-041
gb|CX660345.1|CX660345 PO01025D11 Poplar SC cDNA library Po... 112 7e-039
gb|BU882889.1|BU882889 UM83TF04 Populus flower cDNA library... 159 3e-038
gb|CK096310.1|CK096310 UB10CPE08.3pR Populus active cambium... 120 4e-038
gb|DT490291.1|DT490291 WS02544.B21_I22 PT-MB-N-A-15 Populus... 118 5e-038
gb|DT489131.1|DT489131 WS02538.B21_G02 PT-MB-N-A-15 Populus... 105 2e-037
gb|BU880392.1|BU880392 UM45TD08 Populus flower cDNA library... 110 8e-037
gb|DT510612.1|DT510612 WS02427.BR_A17 PTxD-ICC-N-A-14 Popul... 116 1e-036
gb|DT509633.1|DT509633 WS02424.BR_E10 PTxD-ICC-N-A-14 Popul... 116 1e-036
gb|DT514757.1|DT514757 WS02425.B21_L05 PTxD-ICC-N-A-14 Popu... 114 5e-036
gb|DT510135.1|DT510135 WS02425.BR_L05 PTxD-ICC-N-A-14 Popul... 118 3e-035
gb|DN484113.1|DN484113 PTRI15.3pR Populus cDNA, trichocarpa... 149 5e-035
gb|BU892010.1|BU892010 P058B10 Populus petioles cDNA librar... 113 5e-035
gb|CV245807.1|CV245807 WS0259.B21_G24 PT-MB-N-A-15 Populus ... 124 1e-034
gb|DN484116.1|DN484116 PTRI18.3pR Populus cDNA, trichocarpa... 111 4e-034
gb|BU869954.1|BU869954 Q006E04 Populus flower cDNA library ... 112 8e-034
gb|BI139220.1|BI139220 F126P60Y Populus flower cDNA library... 130 1e-033
gb|BU883349.1|BU883349 UM89TD10 Populus flower cDNA library... 141 2e-033
gb|DT493519.1|DT493519 WS0111.BR_J17 PT-P-FL-A-2 Populus tr... 105 2e-033
gb|BU895896.1|BU895896 X032F06 Populus wood cDNA library Po... 106 5e-033
gb|BU869391.1|BU869391 M129E09 Populus flower cDNA library ... 138 1e-032
gb|BU875452.1|BU875452 V007C11 Populus flower cDNA library ... 141 1e-032
gb|AF185574.2| Populus tremuloides transcription factor MAG... 141 1e-032
gb|CK101482.1|CK101482 F070P21.5pR Populus flower cDNA libr... 136 3e-031
gb|DN491294.1|DN491294 UM83TF04.3pR Populus female catkins ... 133 2e-030
gb|DT521357.1|DT521357 WS02034.B21_B05 PTxN-IB-N-A-11 Popul... 95 4e-030
gb|CK090795.1|CK090795 F025P39.3pR Populus flower cDNA libr... 132 6e-030
gb|BU896348.1|BU896348 X039D07 Populus wood cDNA library Po... 109 7e-029
gb|CX186726.1|CX186726 A02_45-82_02.ab1 leaf inoculated wit... 88 1e-028
gb|AF034095.2| Populus tremuloides Apetala 1 protein mRNA, ... 119 5e-027
gb|BU875165.1|BU875165 V003A12 Populus flower cDNA library ... 121 9e-027
gb|CX168497.1|CX168497 E12_69-75_10.ab1 leaf inoculated wit... 121 1e-026
gb|CX172311.1|CX172311 A03_69-28_01.ab1 leaf inoculated wit... 121 1e-026
gb|CV267701.1|CV267701 WS02032.B21_H10 PTxN-IB-N-A-11 Popul... 120 2e-026
gb|BI138350.1|BI138350 F104P08Y Populus flower cDNA library... 119 3e-026
gb|CN519626.1|CN519626 GQ0104.B3_J10 GQ010 Populus trichoca... 117 1e-025
gb|AF052570.1|AF052570 Populus balsamifera subsp. trichocar... 117 1e-025
gb|AY359611.1| Populus tomentosa sex male AGAMOUS (AG2) gen... 117 1e-025
gb|BU878009.1|BU878009 V042A05 Populus flower cDNA library ... 117 2e-025
gb|BU882965.1|BU882965 UM84TE12 Populus flower cDNA library... 117 2e-025
gb|BU883614.1|BU883614 UM95TA01 Populus flower cDNA library... 117 2e-025
gb|BU828831.1|BU828831 K029P51P Populus apical shoot cDNA l... 116 2e-025
gb|CA925124.1|CA925124 MTU7TL.P13.H01 Aspen leaf cDNA Libra... 116 2e-025
gb|CV231279.1|CV231279 WS0194.B21_A22 PT-DX-N-A-10 Populus ... 116 2e-025
gb|AF377868.1| Populus tremuloides MADS-box protein PTM5 mR... 116 2e-025
gb|BU876515.1|BU876515 V021F11 Populus flower cDNA library ... 116 3e-025
gb|CK106139.1|CK106139 UB10CPE08.5pR Populus active cambium... 116 3e-025
gb|CV242362.1|CV242362 WS02514.B21.1_N17 PT-MB-N-A-15 Popul... 116 3e-025
gb|DT472398.1|DT472398 WS01226.BR.1_F17 PT-GT-FL-A-3 Populu... 116 3e-025
gb|BI123112.1|BI123112 I017P76P Populus leaf cDNA library P... 82 3e-025
gb|BU871261.1|BU871261 Q028F06 Populus flower cDNA library ... 115 6e-025
gb|BU891075.1|BU891075 P045E12 Populus petioles cDNA librar... 115 6e-025
gb|CA924237.1|CA924237 MTU7CL.P3.D05 Aspen leaf cDNA Librar... 115 6e-025
gb|AF052571.1|AF052571 Populus balsamifera subsp. trichocar... 115 6e-025
gb|AY359607.1| Populus yunnanensis sex male AGAMOUS (AG2) g... 115 6e-025
gb|AY359609.1| Populus tomentosa sex female AGAMOUS (AG2) g... 115 6e-025
gb|DT524337.1|DT524337 WS02042.C21.1_F18 PTxN-IB-N-A-11 Pop... 115 8e-025
gb|CK109990.1|CK109990 N051E04 Populus bark cDNA library Po... 114 1e-024
gb|CV242364.1|CV242364 WS02514.B21.1_N19 PT-MB-N-A-15 Popul... 114 1e-024
gb|BU875666.1|BU875666 V009G10 Populus flower cDNA library ... 114 1e-024
gb|CA924456.1|CA924456 MTU7CL.P5.H08 Aspen leaf cDNA Librar... 114 1e-024
gb|DT517651.1|DT517651 WS02434.B21_O16 PTxD-ICC-N-A-14 Popu... 75 2e-024
gb|CK098276.1|CK098276 A010P29.5pR Hybrid aspen plasmid lib... 113 2e-024
gb|AY359608.1| Populus yunnanensis sex male AGAMOUS (AG1) g... 113 3e-024
gb|AY359610.1| Populus tomentosa sex female AGAMOUS (AG1) g... 113 3e-024
gb|AY359612.1| Populus tomentosa sex male AGAMOUS (AG1) gen... 113 3e-024
gb|DN500477.1|DN500477 UL55PC09.5pR Populus cold stressed l... 112 4e-024
gb|BU894040.1|BU894040 X001D02 Populus wood cDNA library Po... 78 4e-024
gb|AI161962.1|AI161962 A010P29U Hybrid aspen plasmid librar... 112 5e-024
gb|BU887610.1|BU887610 R064B01 Populus root cDNA library Po... 112 5e-024
gb|DN484014.1|DN484014 PSO205E04 Populus tomentiglandulosa ... 112 5e-024
gb|CV255176.1|CV255176 WS02412.B21_E13 PTxD-ICC-N-A-14 Popu... 111 7e-024
gb|DN484220.1|DN484220 F126P60.3pR Populus flower cDNA libr... 111 7e-024
gb|BU876286.1|BU876286 V018G10 Populus flower cDNA library ... 111 1e-023
gb|BU876773.1|BU876773 V025B06 Populus flower cDNA library ... 111 1e-023
gb|CX654436.1|CX654436 PO02006B02 Poplar SC cDNA library Po... 111 1e-023
gb|BU896825.1|BU896825 X046D07 Populus wood cDNA library Po... 111 1e-023
gb|BU897836.1|BU897836 X070E03 Populus wood cDNA library Po... 111 1e-023
gb|AJ780611.1|AJ780611 AJ780611 Populus euphratica leaf 3-6... 110 2e-023
gb|BU879372.1|BU879372 V059D02 Populus flower cDNA library ... 102 4e-023
gb|BU879741.1|BU879741 V063H01 Populus flower cDNA library ... 102 4e-023
gb|DN484143.1|DN484143 PTRI15.5pR Populus cDNA, trichocarpa... 95 9e-023
gb|CF229485.1|CF229485 PtaXM0026A5A0501 Poplar cDNA library... 75 9e-023
gb|BU809225.1|BU809225 UL55PC09 Populus leaf cDNA library P... 108 9e-023
gb|DN485140.1|DN485140 M112C09.3pR Populus female catkins c... 107 1e-022
gb|CA925126.1|CA925126 MTU7TL.P13.H03 Aspen leaf cDNA Libra... 106 2e-022
gb|CX171462.1|CX171462 A11_69-81_01.ab1 leaf inoculated wit... 106 2e-022
gb|AJ776745.1|AJ776745 AJ776745 Populus euphratica root 3-6... 105 4e-022
gb|CX175553.1|CX175553 G09_69-34_13.ab1 leaf inoculated wit... 105 6e-022
gb|CK101433.1|CK101433 F057P86.5pR Populus flower cDNA libr... 105 8e-022
gb|BI135750.1|BI135750 F057P86Y Populus flower cDNA library... 103 2e-021
gb|BU835875.1|BU835875 T079G04 Populus apical shoot cDNA li... 103 3e-021
gb|CB240437.1|CB240437 PopSC00421 Poplar SC cDNA library Po... 103 3e-021
gb|CX176973.1|CX176973 F04_69-92_12.ab1 leaf inoculated wit... 103 3e-021
gb|CV245843.1|CV245843 WS0259.B21_I15 PT-MB-N-A-15 Populus ... 102 4e-021
gb|CX169762.1|CX169762 F05_69-66_11.ab1 leaf inoculated wit... 102 4e-021
>gb|AY615966.1| Populus balsamifera subsp. trichocarpa APETALA1-like MADS-box PTAP1-2
mRNA, complete cds
Length = 1146
Score = 274 bits (592), Expect = 1e-072
Identities = 112/181 (61%), Positives = 149/181 (82%)
Frame = -1 / +2
Query: 1215 RQAKMGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGKLYE 1036
R+ +MGRG+VQLKRIENKINRQVTFSKRR GLLKKA+EISVLCDAEVA+IVFS KGKL+E
Sbjct: 152 REREMGRGRVQLKRIENKINRQVTFSKRRTGLLKKANEISVLCDAEVALIVFSHKGKLFE 331
Query: 1035 YASDSRMDKILERYERYSYAEKALISAESESEGNWCHEYRKLKAKIETIQRCHKHLMGED 856
Y++D M+KILERYERYSYAE+ L++ + +S+GNW EY +LKAK+E +QR H++ +GED
Sbjct: 332 YSTDDSMEKILERYERYSYAERQLVATDLDSQGNWTLEYNRLKAKVELLQRNHRNYLGED 511
Query: 855 LESLNPKXXXXXXXXXXXXLKHIRSRKSHLMAESISELQKKERSLQEENKALQKELSERQ 676
L+S++ K LKHIR+RK+HLM++SISELQ+KE+++Q +N L K++ E++
Sbjct: 512 LDSMSLKELQNLEQQIDTALKHIRARKNHLMSQSISELQRKEKAIQVQNNMLVKQIKEKE 691
Query: 675 K 673
K
Sbjct: 692 K 694
Score = 141 bits (302), Expect = 1e-032
Identities = 74/127 (58%), Positives = 79/127 (62%)
Frame = +2 / -1
Query: 848 DSRSSPIRCLWHLCMVSILAFSFLYSWHQFPSLSDSAEIRAFSA*EYRS*RSRILSMRES 1027
+SRSSP LW LC S A S LYS QFP S S SA*EY S*RS I SM S
Sbjct: 519 ESRSSPK*FLWFLCRSSTFALSLLYSRVQFPCESRSVATSCLSA*EYLS*RSSIFSMESS 340
Query: 1028 EAYS*SLPLGEKTMTATSASQRTEISCAFFSSPFRRLEKVTCRFILFSIRFSCTLPRPIF 1207
YS S PL EKT+ ATSAS RTEIS AFF++P LE VTCR ILFSI F+ TLP PI
Sbjct: 339 VEYSKSFPL*EKTIKATSASHRTEISLAFFNNPVLLLENVTCRLILFSILFN*TLPLPIS 160
Query: 1208 ACLRSLL 1228
L L
Sbjct: 159 LSLSKCL 139
>gb|AY615964.1| Populus balsamifera subsp. trichocarpa APETALA1-like MADS-box PTAP1-1
mRNA, complete cds
Length = 942
Score = 271 bits (586), Expect = 7e-072
Identities = 113/184 (61%), Positives = 150/184 (81%)
Frame = -1 / +1
Query: 1215 RQAKMGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGKLYE 1036
R+ +MGRG+VQLKRIENKINRQVTFSKRR GLLKKAHEISVLCDAEVA+IVFS KGKL+E
Sbjct: 13 REREMGRGRVQLKRIENKINRQVTFSKRRTGLLKKAHEISVLCDAEVALIVFSHKGKLFE 192
Query: 1035 YASDSRMDKILERYERYSYAEKALISAESESEGNWCHEYRKLKAKIETIQRCHKHLMGED 856
Y++++ M+KILER+ERYSYAE+ L++ + +S+GNW EY +LKAK+E +QR H+H +GED
Sbjct: 193 YSTNACMEKILERHERYSYAERQLVATDLDSQGNWTLEYNRLKAKVELLQRNHRHYLGED 372
Query: 855 LESLNPKXXXXXXXXXXXXLKHIRSRKSHLMAESISELQKKERSLQEENKALQKELSERQ 676
L+S++ K LK IR RK+HLM +SISELQ KE++++E+N L K++ E++
Sbjct: 373 LDSVSLKELQNLEQQIDTALKLIRERKNHLMYQSISELQIKEKAIKEQNNMLVKQIKEKE 552
Query: 675 KAVA 664
KA+A
Sbjct: 553 KALA 564
Score = 139 bits (298), Expect(2) = 2e-033
Identities = 71/119 (59%), Positives = 77/119 (64%)
Frame = +2 / -2
Query: 848 DSRSSPIRCLWHLCMVSILAFSFLYSWHQFPSLSDSAEIRAFSA*EYRS*RSRILSMRES 1027
+SRSSP CLW LC S A S LYS QFP S S SA*EY S RS I SM+
Sbjct: 380 ESRSSPK*CLWFLCRSSTFALSLLYSRVQFPCESRSVATNCLSA*EYLSWRSSIFSMQAL 201
Query: 1028 EAYS*SLPLGEKTMTATSASQRTEISCAFFSSPFRRLEKVTCRFILFSIRFSCTLPRPI 1204
YS S PL EKT+ ATSAS RTEIS AFF++P LE VTCR ILFSI F+ TLP PI
Sbjct: 200 VEYSKSFPL*EKTIKATSASHRTEIS*AFFNNPVLLLENVTCRLILFSILFN*TLPLPI 24
Score = 24.4 bits (47), Expect(2) = 2e-033
Identities = 14/42 (33%), Positives = 15/42 (35%)
Frame = +2 / -2
Query: 665 ATAFCLSESSFCRAXXXXXXXXXXXXXXEIDSAIRWLFLDLM 790
A+AF S F EID IRW FL M
Sbjct: 563 ASAFSFSLICFTNMLFCSLIAFSFICSSEID*YIRWFFLSRM 438
>gb|AF034093.2| Populus tremuloides PTM1 mRNA, complete cds
Length = 994
Score = 270 bits (585), Expect = 1e-071
Identities = 110/181 (60%), Positives = 149/181 (82%)
Frame = -1 / +2
Query: 1215 RQAKMGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGKLYE 1036
R+ +MGRG+VQLKRIENKINRQVTFSKRR GLLKKAHEISVLCDAEVA+IVFS KGKL+E
Sbjct: 8 REREMGRGRVQLKRIENKINRQVTFSKRRTGLLKKAHEISVLCDAEVALIVFSHKGKLFE 187
Query: 1035 YASDSRMDKILERYERYSYAEKALISAESESEGNWCHEYRKLKAKIETIQRCHKHLMGED 856
Y++D M++ILERYERYSYAE+ L++ + +S+G+W EY +LKAK+E +QR H++ +GED
Sbjct: 188 YSTDDCMEEILERYERYSYAERQLVATDLDSQGDWTLEYNRLKAKVELLQRNHRNYVGED 367
Query: 855 LESLNPKXXXXXXXXXXXXLKHIRSRKSHLMAESISELQKKERSLQEENKALQKELSERQ 676
L+S++ K LKHIR+RK+HLM++SISE+Q+KE+++Q +N L K++ E++
Sbjct: 368 LDSMSLKELQNLEQQIETALKHIRARKNHLMSQSISEMQRKEKAIQVQNNMLVKQIKEKE 547
Query: 675 K 673
K
Sbjct: 548 K 550
Score = 135 bits (290), Expect = 5e-031
Identities = 71/119 (59%), Positives = 77/119 (64%)
Frame = +2 / -2
Query: 848 DSRSSPIRCLWHLCMVSILAFSFLYSWHQFPSLSDSAEIRAFSA*EYRS*RSRILSMRES 1027
+SRSSP LW LC S A S LYS Q P S S SA*EY S*RS I SM+ S
Sbjct: 375 ESRSSPT*FLWFLCRSSTFALSLLYSRVQSPCESRSVATSCLSA*EYLS*RSSISSMQSS 196
Query: 1028 EAYS*SLPLGEKTMTATSASQRTEISCAFFSSPFRRLEKVTCRFILFSIRFSCTLPRPI 1204
YS S PL EKT+ ATSAS RTEIS AFF++P LE VTCR ILFSI F+ TLP PI
Sbjct: 195 VEYSKSFPL*EKTIKATSASHRTEIS*AFFNNPVLLLENVTCRLILFSILFN*TLPLPI 19
>gb|AF034094.2| Populus tremuloides PTM2 mRNA, complete cds
Length = 969
Score = 264 bits (570), Expect = 1e-069
Identities = 110/184 (59%), Positives = 148/184 (80%)
Frame = -1 / +1
Query: 1215 RQAKMGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGKLYE 1036
R+ +MGRG+VQLKRIENKINRQVTFSKRR GLLKKAHEISVLCDAEVA+IVF KGKL+E
Sbjct: 7 REREMGRGRVQLKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALIVFCHKGKLFE 186
Query: 1035 YASDSRMDKILERYERYSYAEKALISAESESEGNWCHEYRKLKAKIETIQRCHKHLMGED 856
Y++++ M+KILER+ERYSYAE+ L++ + +S+GNW EY +LK K+E +QR H+H +GED
Sbjct: 187 YSTNACMEKILERHERYSYAERQLVATDLDSQGNWTLEYNRLKEKVELLQRNHRHYLGED 366
Query: 855 LESLNPKXXXXXXXXXXXXLKHIRSRKSHLMAESISELQKKERSLQEENKALQKELSERQ 676
L+S++ K L+ IR RK+HLM +SISELQ KE++++E+N L K++ E++
Sbjct: 367 LDSVSLKELQNLEKQIDTALELIRERKNHLMYQSISELQIKEKAIKEQNNMLVKQIKEKE 546
Query: 675 KAVA 664
KA+A
Sbjct: 547 KALA 558
Score = 150 bits (323), Expect = 1e-035
Identities = 83/180 (46%), Positives = 92/180 (51%)
Frame = +2 / -2
Query: 665 ATAFCLSESSFCRAXXXXXXXXXXXXXXEIDSAIRWLFLDLMXXXXXXXXXXXXXXXFGF 844
A+AF S F EID IRW FL M
Sbjct: 557 ASAFSFSLICFTNMLFCSLIAFSFICSSEID*YIRWFFLSRMSSRAVSICFSKF*SSLRL 378
Query: 845 KDSRSSPIRCLWHLCMVSILAFSFLYSWHQFPSLSDSAEIRAFSA*EYRS*RSRILSMRE 1024
+SRSSP CLW LC S + S LYS QFP S S SA*EY S RS I SM+
Sbjct: 377 TESRSSPK*CLWFLCRSSTFSLSLLYSRVQFPCESRSVATNCLSA*EYLSWRSSIFSMQA 198
Query: 1025 SEAYS*SLPLGEKTMTATSASQRTEISCAFFSSPFRRLEKVTCRFILFSIRFSCTLPRPI 1204
YS S PL +KT+ ATSAS RTEIS AFF++P LE VTCR ILFSI F+ TLP PI
Sbjct: 197 LVEYSKSFPL*QKTIKATSASHRTEIS*AFFNNPALLLENVTCRLILFSILFN*TLPLPI 18
>gb|DV466358.1|DV466358 MTUNUL1.P5.F01 NUL Populus fremontii x Populus angustifolia cDNA,
mRNA sequence
Length = 723
Score = 165 bits (354), Expect(2) = 3e-069
Identities = 68/82 (82%), Positives = 79/82 (96%)
Frame = -1 / +2
Query: 1203 MGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGKLYEYASD 1024
MGRG++QLKRIENKINRQVTFSKRR+GLLKKAHEISVLCDAEVA+IVFS KGKL+EYA+D
Sbjct: 158 MGRGRIQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYATD 337
Query: 1023 SRMDKILERYERYSYAEKALIS 958
S M++ILERYERYSYAE+ L++
Sbjct: 338 SCMERILERYERYSYAERQLLA 403
Score = 118 bits (252), Expect(2) = 3e-069
Identities = 49/100 (49%), Positives = 70/100 (70%)
Frame = -1 / +2
Query: 966 LISAESESEGNWCHEYRKLKAKIETIQRCHKHLMGEDLESLNPKXXXXXXXXXXXXLKHI 787
L + + E+ G+W EY KLKA+++ +QR +H MGEDL+SLN K LKH+
Sbjct: 398 LANDDPENHGSWTLEYAKLKARVDVLQRNQRHFMGEDLDSLNIKELQNLEHQIDSALKHV 577
Query: 786 RSRKSHLMAESISELQKKERSLQEENKALQKELSERQKAV 667
RSRK+ LM ESISELQKK+++LQE+N L K++ E++KA+
Sbjct: 578 RSRKNQLMYESISELQKKDKALQEQNNMLAKKVKEKEKAI 697
Score = 102 bits (218), Expect(2) = 1e-031
Identities = 52/77 (67%), Positives = 56/77 (72%)
Frame = +2 / -1
Query: 974 SA*EYRS*RSRILSMRESEAYS*SLPLGEKTMTATSASQRTEISCAFFSSPFRRLEKVTC 1153
SA EY S*RSRILSM+ES AYS S P EKT+ ATSASQ TEIS AFF+ P EKVTC
Sbjct: 387 SAYEYLS*RSRILSMQESVAYSKSFPFVEKTIKATSASQSTEISWAFFNKPDLLFEKVTC 208
Query: 1154 RFILFSIRFSCTLPRPI 1204
ILFSI F+ LP PI
Sbjct: 207 LLILFSILFN*ILPLPI 157
Score = 54.7 bits (113), Expect(2) = 1e-031
Identities = 23/43 (53%), Positives = 28/43 (65%)
Frame = +2 / -1
Query: 842 FKDSRSSPIRCLWHLCMVSILAFSFLYSWHQFPSLSDSAEIRA 970
FK+SRSSP++CLW LC S A SF YS Q P S S+ R+
Sbjct: 522 FKESRSSPMKCLWFLCRTSTRALSFAYSKVQLPWFSGSSFARS 394
>gb|BU872670.1|BU872670 Q045E11 Populus flower cDNA library Populus trichocarpa cDNA 5 prime,
mRNA sequence
Length = 734
Score = 163 bits (350), Expect(2) = 7e-068
Identities = 67/82 (81%), Positives = 79/82 (96%)
Frame = -1 / +3
Query: 1203 MGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGKLYEYASD 1024
MGRG++QLKRIENKINRQVTFS+RR+GLLKKAHEISVLCDAEVA+IVFS KGKL+EYA+D
Sbjct: 147 MGRGRIQLKRIENKINRQVTFSERRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYATD 326
Query: 1023 SRMDKILERYERYSYAEKALIS 958
S M++ILERYERYSYAE+ L++
Sbjct: 327 SCMERILERYERYSYAERQLLA 392
Score = 115 bits (246), Expect(2) = 7e-068
Identities = 48/100 (48%), Positives = 69/100 (69%)
Frame = -1 / +3
Query: 966 LISAESESEGNWCHEYRKLKAKIETIQRCHKHLMGEDLESLNPKXXXXXXXXXXXXLKHI 787
L + + E+ G+W EY KLKA+++ +QR +H MGEDL+S N K LKH+
Sbjct: 387 LANDDPENHGSWTLEYAKLKARVDVLQRNQRHFMGEDLDSSNIKELQNLEHQIDSALKHV 566
Query: 786 RSRKSHLMAESISELQKKERSLQEENKALQKELSERQKAV 667
RSRK+ LM ESISELQKK+++LQE+N L K++ E++KA+
Sbjct: 567 RSRKNQLMYESISELQKKDKALQEQNNMLAKKVKEKEKAI 686
Score = 101 bits (216), Expect(2) = 8e-031
Identities = 52/77 (67%), Positives = 56/77 (72%)
Frame = +2 / -2
Query: 974 SA*EYRS*RSRILSMRESEAYS*SLPLGEKTMTATSASQRTEISCAFFSSPFRRLEKVTC 1153
SA EY S*RSRILSM+ES AYS S P EKT+ ATSASQ TEIS AFF+ P EKVTC
Sbjct: 376 SAYEYLS*RSRILSMQESVAYSKSFPFVEKTIKATSASQSTEISWAFFNKPDLLSEKVTC 197
Query: 1154 RFILFSIRFSCTLPRPI 1204
ILFSI F+ LP PI
Sbjct: 196 LLILFSILFN*ILPLPI 146
Score = 52.8 bits (109), Expect(2) = 8e-031
Identities = 22/43 (51%), Positives = 28/43 (65%)
Frame = +2 / -2
Query: 842 FKDSRSSPIRCLWHLCMVSILAFSFLYSWHQFPSLSDSAEIRA 970
F++SRSSP++CLW LC S A SF YS Q P S S+ R+
Sbjct: 511 FEESRSSPMKCLWFLCKTSTRALSFAYSKVQLPWFSGSSFARS 383
>gb|DV466538.1|DV466538 MTUNUL1.P6.H12 NUL Populus fremontii x Populus angustifolia cDNA,
mRNA sequence
Length = 684
Score = 165 bits (354), Expect(2) = 2e-067
Identities = 68/82 (82%), Positives = 79/82 (96%)
Frame = -1 / +2
Query: 1203 MGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGKLYEYASD 1024
MGRG++QLKRIENKINRQVTFSKRR+GLLKKAHEISVLCDAEVA+IVFS KGKL+EYA+D
Sbjct: 155 MGRGRIQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYATD 334
Query: 1023 SRMDKILERYERYSYAEKALIS 958
S M++ILERYERYSYAE+ L++
Sbjct: 335 SCMERILERYERYSYAERQLLA 400
Score = 111 bits (238), Expect(2) = 2e-067
Identities = 47/96 (48%), Positives = 66/96 (68%)
Frame = -1 / +2
Query: 966 LISAESESEGNWCHEYRKLKAKIETIQRCHKHLMGEDLESLNPKXXXXXXXXXXXXLKHI 787
L + + E+ G+W EY KLKA+++ +QR +H MGEDL+SLN K LKH+
Sbjct: 395 LANDDPENHGSWTLEYAKLKARVDVLQRNQRHFMGEDLDSLNIKELQNLEHQIDSALKHV 574
Query: 786 RSRKSHLMAESISELQKKERSLQEENKALQKELSER 679
RSRK+ LM ESISELQKK+++LQE+N L K++ E+
Sbjct: 575 RSRKNQLMYESISELQKKDKALQEQNNMLAKKVKEK 682
Score = 102 bits (218), Expect(2) = 1e-031
Identities = 52/77 (67%), Positives = 56/77 (72%)
Frame = +2 / -1
Query: 974 SA*EYRS*RSRILSMRESEAYS*SLPLGEKTMTATSASQRTEISCAFFSSPFRRLEKVTC 1153
SA EY S*RSRILSM+ES AYS S P EKT+ ATSASQ TEIS AFF+ P EKVTC
Sbjct: 384 SAYEYLS*RSRILSMQESVAYSKSFPFVEKTIKATSASQSTEISWAFFNKPDLLFEKVTC 205
Query: 1154 RFILFSIRFSCTLPRPI 1204
ILFSI F+ LP PI
Sbjct: 204 LLILFSILFN*ILPLPI 154
Score = 54.7 bits (113), Expect(2) = 1e-031
Identities = 23/43 (53%), Positives = 28/43 (65%)
Frame = +2 / -1
Query: 842 FKDSRSSPIRCLWHLCMVSILAFSFLYSWHQFPSLSDSAEIRA 970
FK+SRSSP++CLW LC S A SF YS Q P S S+ R+
Sbjct: 519 FKESRSSPMKCLWFLCRTSTRALSFAYSKVQLPWFSGSSFARS 391
>gb|BU868189.1|BU868189 M112C09 Populus flower cDNA library Populus trichocarpa cDNA 5 prime,
mRNA sequence
Length = 615
Score = 165 bits (354), Expect(2) = 4e-065
Identities = 68/82 (82%), Positives = 79/82 (96%)
Frame = -1 / +3
Query: 1203 MGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGKLYEYASD 1024
MGRG++QLKRIENKINRQVTFSKRR+GLLKKAHEISVLCDAEVA+IVFS KGKL+EYA+D
Sbjct: 114 MGRGRIQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYATD 293
Query: 1023 SRMDKILERYERYSYAEKALIS 958
S M++ILERYERYSYAE+ L++
Sbjct: 294 SCMERILERYERYSYAERQLLA 359
Score = 104 bits (222), Expect(2) = 4e-065
Identities = 44/86 (51%), Positives = 60/86 (69%)
Frame = -1 / +3
Query: 966 LISAESESEGNWCHEYRKLKAKIETIQRCHKHLMGEDLESLNPKXXXXXXXXXXXXLKHI 787
L + + E+ G+W EY KLKA+++ +QR +H MGEDL+SLN K LKH+
Sbjct: 354 LANDDPENHGSWTLEYAKLKARVDVLQRNQRHFMGEDLDSLNIKELQNLEHQIDSALKHV 533
Query: 786 RSRKSHLMAESISELQKKERSLQEEN 709
RSRK+ LM ESISELQKK+++LQE+N
Sbjct: 534 RSRKNQLMYESISELQKKDKALQEQN 611
Score = 104 bits (221), Expect(2) = 5e-032
Identities = 53/77 (68%), Positives = 56/77 (72%)
Frame = +2 / -3
Query: 974 SA*EYRS*RSRILSMRESEAYS*SLPLGEKTMTATSASQRTEISCAFFSSPFRRLEKVTC 1153
SA EY S*RSRILSM+ES AYS S P EKT+ ATSASQ TEIS AFF+ P EKVTC
Sbjct: 343 SAYEYLS*RSRILSMQESVAYSKSFPFVEKTIKATSASQSTEISWAFFNKPDLLFEKVTC 164
Query: 1154 RFILFSIRFSCTLPRPI 1204
ILFSI FS LP PI
Sbjct: 163 LLILFSILFS*ILPLPI 113
Score = 54.7 bits (113), Expect(2) = 5e-032
Identities = 23/43 (53%), Positives = 28/43 (65%)
Frame = +2 / -3
Query: 842 FKDSRSSPIRCLWHLCMVSILAFSFLYSWHQFPSLSDSAEIRA 970
FK+SRSSP++CLW LC S A SF YS Q P S S+ R+
Sbjct: 478 FKESRSSPMKCLWFLCRTSTRALSFAYSKVQLPWFSGSSFARS 350
>gb|AY615965.1| Populus balsamifera subsp. trichocarpa APETALA1-like MADS-box
PTAP1-1a mRNA, complete cds; alternatively spliced
Length = 1344
Score = 243 bits (524), Expect = 3e-063
Identities = 103/161 (63%), Positives = 130/161 (80%)
Frame = -1 / +2
Query: 1215 RQAKMGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGKLYE 1036
R+ +MGRG+VQLKRIENKINRQVTFSKRR GLLKKAHEISVLCDAEVA+I FS KGKL+E
Sbjct: 374 REREMGRGRVQLKRIENKINRQVTFSKRRTGLLKKAHEISVLCDAEVALIFFSHKGKLFE 553
Query: 1035 YASDSRMDKILERYERYSYAEKALISAESESEGNWCHEYRKLKAKIETIQRCHKHLMGED 856
Y++++ M+KILER+ERYSYAE+ L++ + +S+GNW EY +LKAK+E +QR H+H +GED
Sbjct: 554 YSTNACMEKILERHERYSYAERQLVATDLDSQGNWTLEYNRLKAKVELLQRNHRHYLGED 733
Query: 855 LESLNPKXXXXXXXXXXXXLKHIRSRKSHLMAESISELQKK 733
L+S++ K LK IR RK+HLM +SISELQ K
Sbjct: 734 LDSVSLKELQNLEQQIDTALKLIRERKNHLMYQSISELQIK 856
Score = 136 bits (292), Expect(2) = 5e-032
Identities = 70/119 (58%), Positives = 76/119 (63%)
Frame = +2 / -1
Query: 848 DSRSSPIRCLWHLCMVSILAFSFLYSWHQFPSLSDSAEIRAFSA*EYRS*RSRILSMRES 1027
+SRSSP CLW LC S A S LYS QFP S S SA*EY S RS I SM+
Sbjct: 741 ESRSSPK*CLWFLCRSSTFALSLLYSRVQFPCESRSVATNCLSA*EYLSWRSSIFSMQAL 562
Query: 1028 EAYS*SLPLGEKTMTATSASQRTEISCAFFSSPFRRLEKVTCRFILFSIRFSCTLPRPI 1204
YS S PL EK + ATSAS RTEIS AFF++P LE VTCR ILFSI F+ TLP PI
Sbjct: 561 VEYSKSFPL*EKKIKATSASHRTEIS*AFFNNPVLLLENVTCRLILFSILFN*TLPLPI 385
Score = 22.1 bits (42), Expect(2) = 5e-032
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = +2 / -1
Query: 749 EIDSAIRWLFLDLM 790
EID IRW FL M
Sbjct: 840 EID*YIRWFFLSRM 799
>gb|AY515153.1| Populus deltoides APETALA-like protein AP1 mRNA, complete cds
Length = 1109
Score = 233 bits (503), Expect = 2e-060
Identities = 100/180 (55%), Positives = 137/180 (76%)
Frame = -1 / +3
Query: 1206 KMGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGKLYEYAS 1027
KMGRG+VQLKRIEN I+RQVTFSKRR GLLKKAHEISVLCDA+VAVIVFS KGKL+EY++
Sbjct: 75 KMGRGRVQLKRIENNISRQVTFSKRRTGLLKKAHEISVLCDADVAVIVFSTKGKLFEYST 254
Query: 1026 DSRMDKILERYERYSYAEKALISAESESEGNWCHEYRKLKAKIETIQRCHKHLMGEDLES 847
DS M+ ILERYER SYAE+ + E +G+W E+ KL+A++E +QR ++ G+DL+
Sbjct: 255 DSSMESILERYERCSYAEQQFVPHGPEHQGSWFLEHPKLRARVELLQRNLRNYTGQDLDP 434
Query: 846 LNPKXXXXXXXXXXXXLKHIRSRKSHLMAESISELQKKERSLQEENKALQKELSERQKAV 667
L+ K LK +RSRK+ L+ ES++E+QKKE++LQ++N L +++ ++ KA+
Sbjct: 435 LSYKELHHLEQKIDTALKSVRSRKNQLVHESLAEMQKKEKALQDQNNILVEQVKKKLKAL 614
Score = 124 bits (265), Expect = 1e-027
Identities = 70/128 (54%), Positives = 76/128 (59%)
Frame = +2 / -2
Query: 845 KDSRSSPIRCLWHLCMVSILAFSFLYSWHQFPSLSDSAEIRAFSA*EYRS*RSRILSMRE 1024
K S+S P+ L LC S LA SF S +Q P S SA E+ S SRI SM E
Sbjct: 436 KGSKSCPV*FLRFLCKSSTLALSFGCSKNQLP*CSGPCGTNCCSAYEHLSYLSRIDSMLE 257
Query: 1025 SEAYS*SLPLGEKTMTATSASQRTEISCAFFSSPFRRLEKVTCRFILFSIRFSCTLPRPI 1204
S YS S P EKT+TATSASQRTEIS AFFS P LE VTC ILFSI F+ TLP PI
Sbjct: 256 SVEYSKSFPFVEKTITATSASQRTEIS*AFFSKPVLLLENVTCLLILFSILFN*TLPLPI 77
Query: 1205 FACLRSLL 1228
F S L
Sbjct: 76 FIIFHSFL 53
>gb|CV262641.1|CV262641 WS0202.B21_B22 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS0202_B22 3', mRNA sequence
Length = 961
Score = 118 bits (252), Expect(3) = 5e-058
Identities = 49/100 (49%), Positives = 70/100 (70%)
Frame = -1 / -2
Query: 966 LISAESESEGNWCHEYRKLKAKIETIQRCHKHLMGEDLESLNPKXXXXXXXXXXXXLKHI 787
L + + E+ G+W EY KLKA+++ +QR +H MGEDL+SLN K LKH+
Sbjct: 735 LANDDPENHGSWTLEYAKLKARVDVLQRNQRHFMGEDLDSLNIKELQNLEHQIDSALKHV 556
Query: 786 RSRKSHLMAESISELQKKERSLQEENKALQKELSERQKAV 667
RSRK+ LM ESISELQKK+++LQE+N L K++ E++KA+
Sbjct: 555 RSRKNQLMYESISELQKKDKALQEQNNMLAKKVKEKEKAI 436
Score = 81.3 bits (171), Expect(3) = 5e-058
Identities = 35/40 (87%), Positives = 37/40 (92%)
Frame = -1 / -3
Query: 1167 NKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKG 1048
NKINRQVTFSKRR+GLLKKAHEISVLCDAEVA+IV KG
Sbjct: 938 NKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVSPQKG 819
Score = 64.8 bits (135), Expect(3) = 5e-058
Identities = 25/35 (71%), Positives = 32/35 (91%)
Frame = -1 / -2
Query: 1062 FSPKGKLYEYASDSRMDKILERYERYSYAEKALIS 958
FS KGKL+EYA+DS M++ILERYERYSYAE+ L++
Sbjct: 834 FSTKGKLFEYATDSCMERILERYERYSYAERQLLA 730
Score = 54.7 bits (113), Expect(4) = 8e-025
Identities = 23/43 (53%), Positives = 28/43 (65%)
Frame = +2 / +2
Query: 842 FKDSRSSPIRCLWHLCMVSILAFSFLYSWHQFPSLSDSAEIRA 970
FK+SRSSP++CLW LC S A SF YS Q P S S+ R+
Sbjct: 611 FKESRSSPMKCLWFLCRTSTRALSFAYSKVQLPWFSGSSFARS 739
Score = 53.3 bits (110), Expect(4) = 8e-025
Identities = 25/41 (60%), Positives = 28/41 (68%)
Frame = +2 / +1
Query: 1046 LPLGEKTMTATSASQRTEISCAFFSSPFRRLEKVTCRFILF 1168
LP +T+ ATSASQ TEIS AFF+ P EKVTC ILF
Sbjct: 817 LPFCGETIKATSASQSTEISWAFFNKPDLLFEKVTCLLILF 939
Score = 42.8 bits (87), Expect(4) = 8e-025
Identities = 22/30 (73%), Positives = 23/30 (76%)
Frame = +2 / +2
Query: 974 SA*EYRS*RSRILSMRESEAYS*SLPLGEK 1063
SA EY S*RSRILSM+ES AYS S P EK
Sbjct: 746 SAYEYLS*RSRILSMQESVAYSKSFPFVEK 835
Score = 25.8 bits (50), Expect(4) = 8e-025
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +1 / +1
Query: 388 LCVEVAQHPWRQTC 429
L VEVA+HP RQ C
Sbjct: 241 LFVEVAKHPSRQQC 282
>gb|DN494603.1|DN494603 M112C09.5pR Populus female catkins cDNA library Populus trichocarpa
cDNA clone M112C09 5', mRNA sequence
Length = 566
Score = 165 bits (354), Expect(2) = 1e-051
Identities = 68/82 (82%), Positives = 79/82 (96%)
Frame = -1 / +1
Query: 1203 MGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGKLYEYASD 1024
MGRG++QLKRIENKINRQVTFSKRR+GLLKKAHEISVLCDAEVA+IVFS KGKL+EYA+D
Sbjct: 148 MGRGRIQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYATD 327
Query: 1023 SRMDKILERYERYSYAEKALIS 958
S M++ILERYERYSYAE+ L++
Sbjct: 328 SCMERILERYERYSYAERQLLA 393
Score = 104 bits (221), Expect(2) = 5e-032
Identities = 53/77 (68%), Positives = 56/77 (72%)
Frame = +2 / -1
Query: 974 SA*EYRS*RSRILSMRESEAYS*SLPLGEKTMTATSASQRTEISCAFFSSPFRRLEKVTC 1153
SA EY S*RSRILSM+ES AYS S P EKT+ ATSASQ TEIS AFF+ P EKVTC
Sbjct: 377 SAYEYLS*RSRILSMQESVAYSKSFPFVEKTIKATSASQSTEISWAFFNKPDLLFEKVTC 198
Query: 1154 RFILFSIRFSCTLPRPI 1204
ILFSI FS LP PI
Sbjct: 197 LLILFSILFS*ILPLPI 147
Score = 59.7 bits (124), Expect(2) = 1e-051
Identities = 25/59 (42%), Positives = 35/59 (59%)
Frame = -1 / +1
Query: 966 LISAESESEGNWCHEYRKLKAKIETIQRCHKHLMGEDLESLNPKXXXXXXXXXXXXLKH 790
L + + E+ G+W EY KLKA+++ +QR +H MGEDL+SLN K LKH
Sbjct: 388 LANDDPENHGSWTLEYAKLKARVDVLQRNQRHFMGEDLDSLNIKELQNLEHQIDSALKH 564
Score = 54.7 bits (113), Expect(2) = 5e-032
Identities = 23/43 (53%), Positives = 28/43 (65%)
Frame = +2 / -1
Query: 842 FKDSRSSPIRCLWHLCMVSILAFSFLYSWHQFPSLSDSAEIRA 970
FK+SRSSP++CLW LC S A SF YS Q P S S+ R+
Sbjct: 512 FKESRSSPMKCLWFLCRTSTRALSFAYSKVQLPWFSGSSFARS 384
>gb|DT499735.1|DT499735 WS9991.BR_D06 PT-P-FL-A-2 Populus trichocarpa cDNA clone WS01111_G09
5', mRNA sequence
Length = 556
Score = 165 bits (354), Expect(2) = 4e-051
Identities = 68/82 (82%), Positives = 79/82 (96%)
Frame = -1 / +2
Query: 1203 MGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGKLYEYASD 1024
MGRG++QLKRIENKINRQVTFSKRR+GLLKKAHEISVLCDAEVA+IVFS KGKL+EYA+D
Sbjct: 188 MGRGRIQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYATD 367
Query: 1023 SRMDKILERYERYSYAEKALIS 958
S M++ILERYERYSYAE+ L++
Sbjct: 368 SCMERILERYERYSYAERQLLA 433
Score = 104 bits (221), Expect(2) = 5e-032
Identities = 53/77 (68%), Positives = 56/77 (72%)
Frame = +2 / -2
Query: 974 SA*EYRS*RSRILSMRESEAYS*SLPLGEKTMTATSASQRTEISCAFFSSPFRRLEKVTC 1153
SA EY S*RSRILSM+ES AYS S P EKT+ ATSASQ TEIS AFF+ P EKVTC
Sbjct: 417 SAYEYLS*RSRILSMQESVAYSKSFPFVEKTIKATSASQSTEISWAFFNKPDLLFEKVTC 238
Query: 1154 RFILFSIRFSCTLPRPI 1204
ILFSI FS LP PI
Sbjct: 237 LLILFSILFS*ILPLPI 187
Score = 57.9 bits (120), Expect(2) = 4e-051
Identities = 21/42 (50%), Positives = 31/42 (73%)
Frame = -1 / +2
Query: 966 LISAESESEGNWCHEYRKLKAKIETIQRCHKHLMGEDLESLN 841
L + + E+ G+W EY KLKA+++ +QR +H MGEDL+SLN
Sbjct: 428 LANDDPENHGSWTLEYAKLKARVDVLQRNQRHFMGEDLDSLN 553
Score = 54.7 bits (113), Expect(2) = 5e-032
Identities = 23/43 (53%), Positives = 28/43 (65%)
Frame = +2 / -2
Query: 842 FKDSRSSPIRCLWHLCMVSILAFSFLYSWHQFPSLSDSAEIRA 970
FK+SRSSP++CLW LC S A SF YS Q P S S+ R+
Sbjct: 552 FKESRSSPMKCLWFLCRTSTRALSFAYSKVQLPWFSGSSFARS 424
>gb|BI136216.1|BI136216 F065P15Y Populus flower cDNA library Populus trichocarpa cDNA, mRNA
sequence
Length = 537
Score = 200 bits (431), Expect = 2e-050
Identities = 86/163 (52%), Positives = 121/163 (74%)
Frame = -1 / +1
Query: 1155 RQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGKLYEYASDSRMDKILERYERYSYA 976
RQVTFSKRR GLLKKAHEISVLCDA+VAVIVFS KGKL+EY++DS M+ ILERYER SYA
Sbjct: 1 RQVTFSKRRTGLLKKAHEISVLCDADVAVIVFSTKGKLFEYSTDSSMESILERYERCSYA 180
Query: 975 EKALISAESESEGNWCHEYRKLKAKIETIQRCHKHLMGEDLESLNPKXXXXXXXXXXXXL 796
E+ + E +G+W E+ KL+A++E +QR ++ G+DL+ L+ K L
Sbjct: 181 EQQFVPHGPEHQGSWFLEHPKLRARVELLQRNLRNYTGQDLDPLSYKELQHLEQKIDTAL 360
Query: 795 KHIRSRKSHLMAESISELQKKERSLQEENKALQKELSERQKAV 667
K +RSRK+ L+ ES++E+QKKE++LQ++N L +++ ++ KA+
Sbjct: 361 KSVRSRKNQLVHESLAEMQKKEKALQDQNNILVEQVKKKLKAL 489
>gb|BI137078.1|BI137078 F079P74Y Populus flower cDNA library Populus trichocarpa cDNA, mRNA
sequence
Length = 552
Score = 200 bits (431), Expect = 2e-050
Identities = 86/163 (52%), Positives = 121/163 (74%)
Frame = -1 / +1
Query: 1155 RQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGKLYEYASDSRMDKILERYERYSYA 976
RQVTFSKRR GLLKKAHEISVLCDA+VAVIVFS KGKL+EY++DS M+ ILERYER SYA
Sbjct: 1 RQVTFSKRRTGLLKKAHEISVLCDADVAVIVFSTKGKLFEYSTDSSMESILERYERCSYA 180
Query: 975 EKALISAESESEGNWCHEYRKLKAKIETIQRCHKHLMGEDLESLNPKXXXXXXXXXXXXL 796
E+ + E +G+W E+ KL+A++E +QR ++ G+DL+ L+ K L
Sbjct: 181 EQQFVPHGPEHQGSWFLEHPKLRARVELLQRNLRNYTGQDLDPLSYKELQHLEQKIDTAL 360
Query: 795 KHIRSRKSHLMAESISELQKKERSLQEENKALQKELSERQKAV 667
K +RSRK+ L+ ES++E+QKKE++LQ++N L +++ ++ KA+
Sbjct: 361 KSVRSRKNQLVHESLAEMQKKEKALQDQNNILVEQVKKKLKAL 489
>gb|BI137178.1|BI137178 F081P53Y Populus flower cDNA library Populus trichocarpa cDNA, mRNA
sequence
Length = 517
Score = 200 bits (431), Expect = 2e-050
Identities = 86/163 (52%), Positives = 121/163 (74%)
Frame = -1 / +1
Query: 1155 RQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGKLYEYASDSRMDKILERYERYSYA 976
RQVTFSKRR GLLKKAHEISVLCDA+VAVIVFS KGKL+EY++DS M+ ILERYER SYA
Sbjct: 1 RQVTFSKRRTGLLKKAHEISVLCDADVAVIVFSTKGKLFEYSTDSSMESILERYERCSYA 180
Query: 975 EKALISAESESEGNWCHEYRKLKAKIETIQRCHKHLMGEDLESLNPKXXXXXXXXXXXXL 796
E+ + E +G+W E+ KL+A++E +QR ++ G+DL+ L+ K L
Sbjct: 181 EQQFVPHGPEHQGSWFLEHPKLRARVELLQRNLRNYTGQDLDPLSYKELQHLEQKIDTAL 360
Query: 795 KHIRSRKSHLMAESISELQKKERSLQEENKALQKELSERQKAV 667
K +RSRK+ L+ ES++E+QKKE++LQ++N L +++ ++ KA+
Sbjct: 361 KSVRSRKNQLVHESLAEMQKKEKALQDQNNILVEQVKKKLKAL 489
>gb|BI137201.1|BI137201 F082P13Y Populus flower cDNA library Populus trichocarpa cDNA, mRNA
sequence
Length = 503
Score = 196 bits (423), Expect = 2e-049
Identities = 85/163 (52%), Positives = 120/163 (73%)
Frame = -1 / +1
Query: 1155 RQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGKLYEYASDSRMDKILERYERYSYA 976
RQVT SKRR GLLKKAHEISVLCDA+VAVIVFS KGKL+EY++DS M+ ILERYER SYA
Sbjct: 1 RQVTCSKRRTGLLKKAHEISVLCDADVAVIVFSTKGKLFEYSTDSSMESILERYERCSYA 180
Query: 975 EKALISAESESEGNWCHEYRKLKAKIETIQRCHKHLMGEDLESLNPKXXXXXXXXXXXXL 796
E+ + E +G+W E+ KL+A++E +QR ++ G+DL+ L+ K L
Sbjct: 181 EQQFVPHGPEHQGSWFLEHPKLRARVELLQRNLRNYTGQDLDPLSYKELQHLEQKIDTAL 360
Query: 795 KHIRSRKSHLMAESISELQKKERSLQEENKALQKELSERQKAV 667
K +RSRK+ L+ ES++E+QKKE++LQ++N L +++ ++ KA+
Sbjct: 361 KSVRSRKNQLVHESLAEMQKKEKALQDQNNILVEQVKKKLKAL 489
>gb|BI136301.1|BI136301 F066P33Y Populus flower cDNA library Populus trichocarpa cDNA, mRNA
sequence
Length = 560
Score = 191 bits (412), Expect = 7e-048
Identities = 82/159 (51%), Positives = 117/159 (73%)
Frame = -1 / +2
Query: 1143 FSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGKLYEYASDSRMDKILERYERYSYAEKAL 964
FSKRR GLLKKAHEISVLCDA+VAVIVFS KGKL+EY++DS M+ ILERYER SYAE+
Sbjct: 2 FSKRRTGLLKKAHEISVLCDADVAVIVFSTKGKLFEYSTDSSMESILERYERCSYAEQQF 181
Query: 963 ISAESESEGNWCHEYRKLKAKIETIQRCHKHLMGEDLESLNPKXXXXXXXXXXXXLKHIR 784
+ E +G+W E+ KL+A++E +QR ++ G+DL+ L+ K LK +R
Sbjct: 182 VPHGPEHQGSWFLEHPKLRARVELLQRNLRNYTGQDLDPLSYKELQHLEQKIDTALKSVR 361
Query: 783 SRKSHLMAESISELQKKERSLQEENKALQKELSERQKAV 667
SRK+ L+ ES++E+QKKE++LQ++N L +++ ++ KA+
Sbjct: 362 SRKNQLVHESLAEMQKKEKALQDQNNILVEQVKKKLKAL 478
>gb|BU876142.1|BU876142 V016F11 Populus flower cDNA library Populus trichocarpa cDNA 5 prime,
mRNA sequence
Length = 704
Score = 136 bits (292), Expect(2) = 2e-046
Identities = 55/75 (73%), Positives = 68/75 (90%)
Frame = -1 / +2
Query: 1203 MGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGKLYEYASD 1024
MGRG+V+LKRIENKINRQVTF+KRRNGLLKKA+E+SVLCDAE+A+I+FS +GKLYE+ S
Sbjct: 95 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEIALIIFSNRGKLYEFCSS 274
Query: 1023 SRMDKILERYERYSY 979
S M K LERY++ +Y
Sbjct: 275 SSMLKTLERYQKCNY 319
Score = 82.2 bits (173), Expect(2) = 5e-021
Identities = 42/70 (60%), Positives = 45/70 (64%)
Frame = +2 / -3
Query: 1001 SRILSMRESEAYS*SLPLGEKTMTATSASQRTEISCAFFSSPFRRLEKVTCRFILFSIRF 1180
SR+LSM E S S PL EK M A SASQRTE S AFF SPF VTC ILFSI F
Sbjct: 297 SRVLSMLELLQNSYSFPLLEKMMRAISASQRTESS*AFFKSPFLLFANVTCLLILFSILF 118
Query: 1181 SCTLPRPIFA 1210
+ TLP PI +
Sbjct: 117 NSTLPLPIIS 88
Score = 70.7 bits (148), Expect(2) = 2e-046
Identities = 35/94 (37%), Positives = 52/94 (55%)
Frame = -1 / +2
Query: 963 ISAESESEGNWCHEYRKLKAKIETIQRCHKHLMGEDLESLNPKXXXXXXXXXXXXLKHIR 784
+SA E + EY KLKA+ E +QR ++L+GEDL L+ K LK IR
Sbjct: 338 VSAREALELSSQQEYLKLKARYEALQRTQRNLLGEDLGPLSSKELESLERQLDMSLKQIR 517
Query: 783 SRKSHLMAESISELQKKERSLQEENKALQKELSE 682
S ++ M + +++LQ KE L NK+L++ L E
Sbjct: 518 STRTQYMLDQLNDLQHKEHMLTAANKSLRERLME 619
Score = 39.6 bits (80), Expect(2) = 5e-021
Identities = 19/56 (33%), Positives = 25/56 (44%)
Frame = +2 / -3
Query: 758 SAIRWLFLDLMXXXXXXXXXXXXXXXFGFKDSRSSPIRCLWHLCMVSILAFSFLYS 925
S++ W+ +DL+ + RSSP R LW LC S A SF YS
Sbjct: 543 SSMYWVLVDLICFSDISSCLSSDSSSLLLRGPRSSPKRFLWVLCRAS*RALSFRYS 376
>gb|DT511195.1|DT511195 WS02429.BR_M24 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02429_M24 5', mRNA sequence
Length = 696
Score = 138 bits (295), Expect(2) = 4e-046
Identities = 57/82 (69%), Positives = 70/82 (85%)
Frame = -1 / +3
Query: 1224 RDRRQAKMGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGK 1045
R+R MGRG+V+LKRIENKINR VTF+KRRNGLLKKA+E+SVLCDAEVA+I+FS +GK
Sbjct: 18 REREGEDMGRGRVELKRIENKINRXVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGK 197
Query: 1044 LYEYASDSRMDKILERYERYSY 979
LYE+ S S M K LERY++ +Y
Sbjct: 198 LYEFCSSSSMLKTLERYQKCNY 263
Score = 68.0 bits (142), Expect(2) = 4e-046
Identities = 34/94 (36%), Positives = 51/94 (54%)
Frame = -1 / +3
Query: 963 ISAESESEGNWCHEYRKLKAKIETIQRCHKHLMGEDLESLNPKXXXXXXXXXXXXLKHIR 784
+SA E + EY KLKA+ E +QR ++L+GE+L L+ K LK IR
Sbjct: 282 VSAREALELSSQQEYLKLKARYEALQRTQRNLLGEELGPLSSKELESLERQLDMSLKQIR 461
Query: 783 SRKSHLMAESISELQKKERSLQEENKALQKELSE 682
S ++ M + + +LQ KE L NK+L++ L E
Sbjct: 462 STRTQYMLDQLHDLQHKEHMLTAANKSLKERLME 563
>gb|DN500995.1|DN500995 UM45TD08.5pR Populus female catkins cDNA library Populus trichocarpa
cDNA clone UM45TD08 5', mRNA sequence
Length = 682
Score = 137 bits (293), Expect(2) = 4e-046
Identities = 57/82 (69%), Positives = 70/82 (85%)
Frame = -1 / +3
Query: 1224 RDRRQAKMGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGK 1045
R+R MGRG+V+LKRIENKINRQVTF+KRRNGLLKKA+E+SVLC AEVA+I+FS +GK
Sbjct: 33 REREGEDMGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCAAEVALIIFSNRGK 212
Query: 1044 LYEYASDSRMDKILERYERYSY 979
LYE+ S S M K LERY++ +Y
Sbjct: 213 LYEFCSSSSMLKTLERYQKCNY 278
Score = 68.9 bits (144), Expect(2) = 4e-046
Identities = 34/94 (36%), Positives = 52/94 (55%)
Frame = -1 / +3
Query: 963 ISAESESEGNWCHEYRKLKAKIETIQRCHKHLMGEDLESLNPKXXXXXXXXXXXXLKHIR 784
+SA E + EY KLKA+ E +QR ++L+GE+L L+ K LK IR
Sbjct: 297 VSAREALELSSQQEYLKLKARYEALQRTQRNLLGEELGPLSSKELESLERQLDMSLKQIR 476
Query: 783 SRKSHLMAESISELQKKERSLQEENKALQKELSE 682
S ++ M + +++LQ KE L NK+L++ L E
Sbjct: 477 STRTQYMLDQLNDLQHKEHMLTAANKSLKERLME 578
>gb|AY235222.1| Populus tremuloides SEP3-related MADS-box protein (M6) mRNA, complete
cds
Length = 1098
Score = 136 bits (291), Expect(2) = 1e-045
Identities = 56/75 (74%), Positives = 68/75 (90%)
Frame = -1 / +2
Query: 1203 MGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGKLYEYASD 1024
MGRG+VQLKRIENKINRQVTF+KRRNGLLKKA+E+SVLC+AEVA+I+FS +GKLYE+ S
Sbjct: 8 MGRGRVQLKRIENKINRQVTFAKRRNGLLKKAYELSVLCEAEVALIIFSNRGKLYEFCSG 187
Query: 1023 SRMDKILERYERYSY 979
S M K LERY++ +Y
Sbjct: 188 SSMLKTLERYQKCNY 232
Score = 68.0 bits (142), Expect(2) = 1e-045
Identities = 34/94 (36%), Positives = 52/94 (55%)
Frame = -1 / +2
Query: 963 ISAESESEGNWCHEYRKLKAKIETIQRCHKHLMGEDLESLNPKXXXXXXXXXXXXLKHIR 784
+SA E + EY KLKA+ E +QR ++L+GE+L L+ K LK IR
Sbjct: 251 VSAREALELSSQQEYLKLKARYEGLQRTQRNLLGEELGPLSSKDLESLERQLDMSLKQIR 430
Query: 783 SRKSHLMAESISELQKKERSLQEENKALQKELSE 682
S ++ M + +++LQ KE L NK+L++ L E
Sbjct: 431 STRTQYMLDQLNDLQHKEHMLTAANKSLKERLME 532
>gb|BI136881.1|BI136881 F075P93Y Populus flower cDNA library Populus trichocarpa cDNA, mRNA
sequence
Length = 533
Score = 181 bits (389), Expect = 1e-044
Identities = 77/155 (49%), Positives = 113/155 (72%)
Frame = -1 / +2
Query: 1131 RNGLLKKAHEISVLCDAEVAVIVFSPKGKLYEYASDSRMDKILERYERYSYAEKALISAE 952
R GLLKKAHEISVLCDA+VAVIVFS KGKL+EY++DS M+ ILERYER SYAE+ +
Sbjct: 2 RTGLLKKAHEISVLCDADVAVIVFSTKGKLFEYSTDSSMESILERYERCSYAEQQFVPHG 181
Query: 951 SESEGNWCHEYRKLKAKIETIQRCHKHLMGEDLESLNPKXXXXXXXXXXXXLKHIRSRKS 772
E +G+W E+ KL+A++E +QR ++ G+DL+ L+ K LK +RSRK+
Sbjct: 182 PEHQGSWFLEHPKLRARVELLQRNLRNYTGQDLDPLSYKELQHLEQKIDTALKSVRSRKN 361
Query: 771 HLMAESISELQKKERSLQEENKALQKELSERQKAV 667
L+ ES++E+QK+E++LQ++N L +++ ++ KA+
Sbjct: 362 QLVHESLAEMQKREKALQDQNNILVEQVKKKLKAL 466
>gb|BI136255.1|BI136255 F065P62Y Populus flower cDNA library Populus trichocarpa cDNA, mRNA
sequence
Length = 413
Score = 171 bits (367), Expect = 1e-041
Identities = 75/137 (54%), Positives = 99/137 (72%)
Frame = -1 / +1
Query: 1155 RQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGKLYEYASDSRMDKILERYERYSYA 976
RQVTFSKRR GLLKKAHEISVLCDA+VAVIVFS KGKL+EY++DS M+ ILERYER SYA
Sbjct: 1 RQVTFSKRRTGLLKKAHEISVLCDADVAVIVFSTKGKLFEYSTDSSMESILERYERCSYA 180
Query: 975 EKALISAESESEGNWCHEYRKLKAKIETIQRCHKHLMGEDLESLNPKXXXXXXXXXXXXL 796
E+ + E +G+W E+ KL+ ++E +QR ++ G+DL+ L+ K L
Sbjct: 181 EQQFVPHGPEHQGSWFLEHPKLRTRVELLQRNLRNYTGQDLDPLSYKELQHLEQKIDTAL 360
Query: 795 KHIRSRKSHLMAESISE 745
K +RSRK+ L+ ES++E
Sbjct: 361 KSVRSRKNQLVHESLAE 411
>gb|DN501305.1|DN501305 UM83TF04.5pR Populus female catkins cDNA library Populus trichocarpa
cDNA clone UM83TF04 5', mRNA sequence
Length = 860
Score = 171 bits (367), Expect = 1e-041
Identities = 76/181 (41%), Positives = 117/181 (64%)
Frame = -1 / +2
Query: 1215 RQAKMGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGKLYE 1036
+ A MGRGK+++KRIEN NRQVTF KRRNGLLKKA+E+SVLCDAEVA+IVFS +G+LYE
Sbjct: 77 KPADMGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYE 256
Query: 1035 YASDSRMDKILERYERYSYAEKALISAESESEGNWCHEYRKLKAKIETIQRCHKHLMGED 856
YA+++ + ++RY++ S S + + E KL+ +I+ +Q ++HLMG+
Sbjct: 257 YANNNSIRSTIDRYKKASSDSSNASSITEINAQYYQQESAKLRQQIQMLQNSNRHLMGDA 436
Query: 855 LESLNPKXXXXXXXXXXXXLKHIRSRKSHLMAESISELQKKERSLQEENKALQKELSERQ 676
+ +L+ K + IRS+K L+ I LQK+E L+ E+ L+ +++E +
Sbjct: 437 VSNLSVKELKQLENRLERGITRIRSKKHELLLAEIEYLQKREIELENESVCLRTKIAEVE 616
Query: 675 K 673
+
Sbjct: 617 R 619
>gb|CX660345.1|CX660345 PO01025D11 Poplar SC cDNA library Populus alba x Populus tremula var.
glandulosa cDNA clone PO01025D11 5', mRNA sequence
Length = 679
Score = 112 bits (239), Expect(2) = 7e-039
Identities = 45/63 (71%), Positives = 56/63 (88%)
Frame = -1 / +3
Query: 1167 NKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGKLYEYASDSRMDKILERYER 988
NKINRQVTF+KRRNGLLKKA+E+SVLCDAE+A+I+FS +GKLYE+ S S M K LERY++
Sbjct: 3 NKINRQVTFAKRRNGLLKKAYELSVLCDAEIALIIFSNRGKLYEFCSSSSMLKTLERYQK 182
Query: 987 YSY 979
+Y
Sbjct: 183 CNY 191
Score = 69.3 bits (145), Expect(2) = 7e-039
Identities = 35/93 (37%), Positives = 51/93 (54%)
Frame = -1 / +3
Query: 960 SAESESEGNWCHEYRKLKAKIETIQRCHKHLMGEDLESLNPKXXXXXXXXXXXXLKHIRS 781
SA E + EY KLKA+ E +QR ++L+GEDL L+ K LK IRS
Sbjct: 213 SAREALELSSQQEYLKLKARYEALQRTQRNLLGEDLGPLSSKELESLERQLDMSLKQIRS 392
Query: 780 RKSHLMAESISELQKKERSLQEENKALQKELSE 682
++ M + +++LQ KE L NK+L++ L E
Sbjct: 393 TRTQYMLDQLNDLQHKEHMLTAANKSLKERLME 491
>gb|BU882889.1|BU882889 UM83TF04 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 588
Score = 159 bits (342), Expect = 3e-038
Identities = 72/165 (43%), Positives = 105/165 (63%)
Frame = -1 / +3
Query: 1215 RQAKMGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGKLYE 1036
+ A MGRGK+++KRIEN NRQVTF KRRNGLLKKA+E+SVLCDAEVA+IVFS +G+LYE
Sbjct: 93 KPADMGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYE 272
Query: 1035 YASDSRMDKILERYERYSYAEKALISAESESEGNWCHEYRKLKAKIETIQRCHKHLMGED 856
YA+++ + ++RY++ S S + + E KL+ +I+ +Q ++HLMG+
Sbjct: 273 YANNNSIRSTIDRYKKASSDSSNASSITEINAQYYQQESAKLRQQIQMLQNSNRHLMGDA 452
Query: 855 LESLNPKXXXXXXXXXXXXLKHIRSRKSHLMAESISELQKKERSL 721
+ +L+ K + IRS+K + I LQK+E L
Sbjct: 453 VSNLSVKELKQLENRLERGITRIRSKKHEXLLAEIEYLQKREIEL 587
>gb|CK096310.1|CK096310 UB10CPE08.3pR Populus active cambium cDNA library Populus tremula
cDNA clone UB10CPE08 3', mRNA sequence
Length = 829
Score = 120 bits (257), Expect(2) = 4e-038
Identities = 48/72 (66%), Positives = 62/72 (86%)
Frame = -1 / -1
Query: 1203 MGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGKLYEYASD 1024
M RGKVQLKRIEN +RQVTFSKR+NGLLKKA+E+S+LCDAEVAVI+FS KG L+++AS
Sbjct: 709 MARGKVQLKRIENATSRQVTFSKRKNGLLKKAYELSILCDAEVAVIIFSQKGTLFKFAST 530
Query: 1023 SRMDKILERYER 988
++ K ++RY +
Sbjct: 529 DQIQKTIDRYRK 494
Score = 58.8 bits (122), Expect(2) = 4e-038
Identities = 31/91 (34%), Positives = 46/91 (50%)
Frame = -1 / -1
Query: 963 ISAESESEGNWCHEYRKLKAKIETIQRCHKHLMGEDLESLNPKXXXXXXXXXXXXLKHIR 784
I E S+ E + KIE I+ + L+G+DL+S +P+ L +IR
Sbjct: 466 IDVEQYSKEQLRQESENMAKKIEIIEILQRKLLGQDLDSCSPEELHDIGNQLEISLSNIR 287
Query: 783 SRKSHLMAESISELQKKERSLQEENKALQKE 691
+RK+ L E I +L+ KER L EN L K+
Sbjct: 286 ARKTQLFKEQIEQLKAKERLLLMENARLTKQ 194
>gb|DT490291.1|DT490291 WS02544.B21_I22 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02544_I22 3', mRNA sequence
Length = 827
Score = 118 bits (252), Expect(2) = 5e-038
Identities = 49/100 (49%), Positives = 70/100 (70%)
Frame = -1 / -2
Query: 966 LISAESESEGNWCHEYRKLKAKIETIQRCHKHLMGEDLESLNPKXXXXXXXXXXXXLKHI 787
L + + E+ G+W EY KLKA+++ +QR +H MGEDL+SLN K LKH+
Sbjct: 736 LANDDPENHGSWTLEYAKLKARVDVLQRNQRHFMGEDLDSLNIKELQNLEHQIDSALKHV 557
Query: 786 RSRKSHLMAESISELQKKERSLQEENKALQKELSERQKAV 667
RSRK+ LM ESISELQKK+++LQE+N L K++ E++KA+
Sbjct: 556 RSRKNQLMYESISELQKKDKALQEQNNMLAKKVKEKEKAI 437
Score = 60.6 bits (126), Expect(2) = 5e-038
Identities = 23/32 (71%), Positives = 30/32 (93%)
Frame = -1 / -2
Query: 1053 KGKLYEYASDSRMDKILERYERYSYAEKALIS 958
KGKL+EYA+DS M++ILERYERYSYAE+ L++
Sbjct: 826 KGKLFEYATDSCMERILERYERYSYAERQLLA 731
>gb|DT489131.1|DT489131 WS02538.B21_G02 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02538_G02 3', mRNA sequence
Length = 853
Score = 105 bits (223), Expect(2) = 2e-037
Identities = 43/56 (76%), Positives = 53/56 (94%)
Frame = -1 / -2
Query: 1194 GKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGKLYEYAS 1027
GKV L+RIENKI+RQVTFSKRRNGLLKKA+E+S+LCDAEVA+I+FS GKL+E++S
Sbjct: 852 GKVVLERIENKISRQVTFSKRRNGLLKKAYELSLLCDAEVALIIFSSHGKLFEFSS 685
Score = 71.6 bits (150), Expect(2) = 2e-037
Identities = 35/89 (39%), Positives = 49/89 (55%)
Frame = -1 / -2
Query: 948 ESEGNWCHEYRKLKAKIETIQRCHKHLMGEDLESLNPKXXXXXXXXXXXXLKHIRSRKSH 769
E N E +L+AK ET+QR ++ +GEDLE L K L R RK+
Sbjct: 612 EGSHNLYQEVSRLRAKCETLQRSQRNFLGEDLEPLAFKELEKIEKQLDKTLSQARQRKTQ 433
Query: 768 LMAESISELQKKERSLQEENKALQKELSE 682
LM + + EL+ KE+ L+EENK L+ +L E
Sbjct: 432 LMFDKMEELRLKEQELEEENKQLKTKLEE 346
>gb|BU880392.1|BU880392 UM45TD08 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 474
Score = 110 bits (234), Expect(2) = 8e-037
Identities = 45/62 (72%), Positives = 55/62 (88%)
Frame = -1 / +3
Query: 1164 KINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGKLYEYASDSRMDKILERYERY 985
KINRQVTF+KRRNGLLKKA+E+SVLCDAEVA+I+FS +GKLYE+ S S M K LERY++
Sbjct: 3 KINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKC 182
Query: 984 SY 979
+Y
Sbjct: 183 NY 188
Score = 64.8 bits (135), Expect(2) = 8e-037
Identities = 32/89 (35%), Positives = 49/89 (55%)
Frame = -1 / +3
Query: 963 ISAESESEGNWCHEYRKLKAKIETIQRCHKHLMGEDLESLNPKXXXXXXXXXXXXLKHIR 784
+SA E + EY KLKA+ E +QR ++L+GE+L L+ K LK IR
Sbjct: 207 VSAREALELSSQQEYLKLKARYEALQRTQRNLLGEELGPLSSKELESLERQLDMSLKQIR 386
Query: 783 SRKSHLMAESISELQKKERSLQEENKALQ 697
S ++ M + +++LQ KE L NK+L+
Sbjct: 387 STRTQYMLDQLNDLQHKEHMLTAANKSLK 473
>gb|DT510612.1|DT510612 WS02427.BR_A17 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02427_A17 5', mRNA sequence
Length = 920
Score = 116 bits (248), Expect(2) = 1e-036
Identities = 46/65 (70%), Positives = 59/65 (90%)
Frame = -1 / +3
Query: 1215 RQAKMGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGKLYE 1036
+ A MGRGK+++KRIEN NRQVTF KRRNGLLKKA+E+SVLCDAEV++IVFS +G+LYE
Sbjct: 57 KPADMGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVSLIVFSSRGRLYE 236
Query: 1035 YASDS 1021
YA+++
Sbjct: 237 YANNN 251
Score = 57.9 bits (120), Expect(2) = 1e-036
Identities = 28/119 (23%), Positives = 61/119 (51%)
Frame = -1 / +3
Query: 1029 SDSRMDKILERYERYSYAEKALISAESESEGNWCHEYRKLKAKIETIQRCHKHLMGEDLE 850
+++ + ++RY++ S S + + E K++ +I+ +Q ++HLMGE +
Sbjct: 240 ANNNIRSTIDRYKKVSSDSSNTASITEINAQYYQQESAKMRQQIQLLQNSNRHLMGEAVS 419
Query: 849 SLNPKXXXXXXXXXXXXLKHIRSRKSHLMAESISELQKKERSLQEENKALQKELSERQK 673
+L+ K + IRS+K L+ I +QK+E L+ E+ L+ +++E ++
Sbjct: 420 NLSVKELKQLENRLERGMTRIRSKKHELLLAEIEYMQKREIELENESAYLRTKIAEVER 596
>gb|DT509633.1|DT509633 WS02424.BR_E10 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02424_E10 5', mRNA sequence
Length = 905
Score = 116 bits (248), Expect(2) = 1e-036
Identities = 46/65 (70%), Positives = 59/65 (90%)
Frame = -1 / +2
Query: 1215 RQAKMGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGKLYE 1036
+ A MGRGK+++KRIEN NRQVTF KRRNGLLKKA+E+SVLCDAEV++IVFS +G+LYE
Sbjct: 53 KPADMGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVSLIVFSSRGRLYE 232
Query: 1035 YASDS 1021
YA+++
Sbjct: 233 YANNN 247
Score = 57.9 bits (120), Expect(2) = 1e-036
Identities = 28/119 (23%), Positives = 61/119 (51%)
Frame = -1 / +2
Query: 1029 SDSRMDKILERYERYSYAEKALISAESESEGNWCHEYRKLKAKIETIQRCHKHLMGEDLE 850
+++ + ++RY++ S S + + E K++ +I+ +Q ++HLMGE +
Sbjct: 236 ANNNIRSTIDRYKKVSSDSSNTASITEINAQYYQQESAKMRQQIQLLQNSNRHLMGEAVS 415
Query: 849 SLNPKXXXXXXXXXXXXLKHIRSRKSHLMAESISELQKKERSLQEENKALQKELSERQK 673
+L+ K + IRS+K L+ I +QK+E L+ E+ L+ +++E ++
Sbjct: 416 NLSVKELKQLENRLERGMTRIRSKKHELLLAEIEYMQKREIELENESAYLRTKIAEVER 592
>gb|DT514757.1|DT514757 WS02425.B21_L05 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02425_L05 3', mRNA sequence
Length = 825
Score = 114 bits (243), Expect(2) = 5e-036
Identities = 46/69 (66%), Positives = 60/69 (86%)
Frame = -1 / -2
Query: 1194 GKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGKLYEYASDSRM 1015
GKVQLKRIEN +RQVTFSKR+NGLLKKA+E+S+LCDAEVAVI+FS KG L+++AS ++
Sbjct: 824 GKVQLKRIENATSRQVTFSKRKNGLLKKAYELSILCDAEVAVIMFSQKGTLFKFASIDQI 645
Query: 1014 DKILERYER 988
K ++RY +
Sbjct: 644 QKTIDRYRK 618
Score = 57.9 bits (120), Expect(2) = 5e-036
Identities = 29/78 (37%), Positives = 42/78 (53%)
Frame = -1 / -2
Query: 924 EYRKLKAKIETIQRCHKHLMGEDLESLNPKXXXXXXXXXXXXLKHIRSRKSHLMAESISE 745
E + KIE I+ + L+G+DL+S +P+ L +IR+RK+ L E I +
Sbjct: 554 ESANMAKKIEMIEILQRKLLGQDLDSCSPEELHDIDNQLEISLSNIRARKTQLFKEQIEQ 375
Query: 744 LQKKERSLQEENKALQKE 691
LQ KER L EN L K+
Sbjct: 374 LQAKERLLLMENARLTKQ 321
>gb|DT510135.1|DT510135 WS02425.BR_L05 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02425_L05 5', mRNA sequence
Length = 822
Score = 118 bits (253), Expect(2) = 3e-035
Identities = 48/72 (66%), Positives = 62/72 (86%)
Frame = -1 / +1
Query: 1203 MGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGKLYEYASD 1024
M RGKVQLKRIEN +RQVTFSKR+NGLLKKA+E+S+LCDAEVAVI+FS KG L+++AS
Sbjct: 337 MARGKVQLKRIENATSRQVTFSKRKNGLLKKAYELSILCDAEVAVIMFSQKGTLFKFASI 516
Query: 1023 SRMDKILERYER 988
++ K ++RY +
Sbjct: 517 DQIQKTIDRYRK 552
Score = 51.0 bits (105), Expect(2) = 3e-035
Identities = 25/68 (36%), Positives = 37/68 (54%)
Frame = -1 / +1
Query: 924 EYRKLKAKIETIQRCHKHLMGEDLESLNPKXXXXXXXXXXXXLKHIRSRKSHLMAESISE 745
E + KIE I+ + L+G+DL+S +P+ L +IR+RK+ L E I +
Sbjct: 616 ESANMAKKIEMIEILQRKLLGQDLDSCSPEELHDIDNQLEISLSNIRARKTQLFKEQIEQ 795
Query: 744 LQKKERSL 721
LQ KER L
Sbjct: 796 LQAKERLL 819
>gb|DN484113.1|DN484113 PTRI15.3pR Populus cDNA, trichocarpa shoot library Populus
trichocarpa cDNA clone PTRI15 3', mRNA sequence
Length = 776
Score = 149 bits (319), Expect = 5e-035
Identities = 58/115 (50%), Positives = 88/115 (76%)
Frame = -1 / -3
Query: 1017 MDKILERYERYSYAEKALISAESESEGNWCHEYRKLKAKIETIQRCHKHLMGEDLESLNP 838
M+KILERY+RYSYAE+ L++ + +S+GNW EY +LKAK+E +QR H++ +GEDL+S++
Sbjct: 774 MEKILERYKRYSYAERQLVATDLDSQGNWTLEYNRLKAKVELLQRNHRNYLGEDLDSMSL 595
Query: 837 KXXXXXXXXXXXXLKHIRSRKSHLMAESISELQKKERSLQEENKALQKELSERQK 673
K LKHIR+RK+HLM++SISELQ+KE+++Q +N L K++ E++K
Sbjct: 594 KELQNLEQQIDTALKHIRARKNHLMSQSISELQRKEKAIQVQNNMLVKQIKEKEK 430
>gb|BU892010.1|BU892010 P058B10 Populus petioles cDNA library Populus tremula cDNA 5 prime,
mRNA sequence
Length = 708
Score = 113 bits (241), Expect(2) = 5e-035
Identities = 44/62 (70%), Positives = 56/62 (90%)
Frame = -1 / +2
Query: 1212 QAKMGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGKLYEY 1033
+ KMGRGKV+LKRIEN +RQVTFSKRRNGLLKKA E+S+LC+AEV++I+FSP GK Y++
Sbjct: 2 ETKMGRGKVELKRIENSASRQVTFSKRRNGLLKKAFELSILCEAEVSLIIFSPTGKFYQF 181
Query: 1032 AS 1027
+S
Sbjct: 182 SS 187
Score = 55.6 bits (115), Expect(2) = 5e-035
Identities = 27/84 (32%), Positives = 42/84 (50%)
Frame = -1 / +2
Query: 933 WCHEYRKLKAKIETIQRCHKHLMGEDLESLNPKXXXXXXXXXXXXLKHIRSRKSHLMAES 754
W E +L+ I + +H +GED+ L K ++ IR +K ++E
Sbjct: 275 WRCEIEELRRTINKTEAQLRHFIGEDIAPLGLKELKQLERQLKTGVERIRCKKKRAISEH 454
Query: 753 ISELQKKERSLQEENKALQKELSE 682
I L+ ++R+LQEEN LQK L E
Sbjct: 455 IKLLKSEQRALQEENARLQKRLQE 526
>gb|CV245807.1|CV245807 WS0259.B21_G24 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS0259_G24
3', mRNA sequence
Length = 919
Score = 124 bits (265), Expect(2) = 1e-034
Identities = 54/94 (57%), Positives = 69/94 (73%)
Frame = -1 / -3
Query: 1221 DRRQAKMGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGKL 1042
DR +MGR KV+LKRIENK +RQVTFSKRRNG +KKAHE+SVLCD +VA++ FS GKL
Sbjct: 917 DR*AERMGRKKVELKRIENKSSRQVTFSKRRNGXIKKAHELSVLCDVQVALLTFSNGGKL 738
Query: 1041 YEYASDSRMDKILERYERYSYAEKALISAESESE 940
YE++S + KILERY+ +S ++SE
Sbjct: 737 YEFSSVGSIAKILERYKSHSEVMATSSKGANDSE 636
Score = 46.4 bits (95), Expect(2) = 1e-034
Identities = 17/35 (48%), Positives = 27/35 (77%)
Frame = -1 / -3
Query: 792 HIRSRKSHLMAESISELQKKERSLQEENKALQKEL 688
++R+RK LM +S+ LQ KE+ L+EEN+ LQK++
Sbjct: 491 YVRARKMQLMLDSVKSLQDKEKMLKEENQLLQKQI 387
>gb|DN484116.1|DN484116 PTRI18.3pR Populus cDNA, trichocarpa shoot library Populus
trichocarpa cDNA clone PTRI18 3', mRNA sequence
Length = 833
Score = 111 bits (238), Expect(2) = 4e-034
Identities = 47/96 (48%), Positives = 68/96 (70%)
Frame = -1 / -3
Query: 951 SESEGNWCHEYRKLKAKIETIQRCHKHLMGEDLESLNPKXXXXXXXXXXXXLKHIRSRKS 772
S S+GNW EY +LKAK+E +QR H+H +GEDL+S++ K LK IR RK+
Sbjct: 705 SYSQGNWTLEYNRLKAKVELLQRNHRHYLGEDLDSVSLKELQNLEQQIDTALKLIRERKN 526
Query: 771 HLMAESISELQKKERSLQEENKALQKELSERQKAVA 664
HLM +SISELQ KE++++E+N L K++ E++KA+A
Sbjct: 525 HLMYQSISELQIKEKAIKEQNNMLVKQIKEKEKALA 418
Score = 53.8 bits (111), Expect(2) = 4e-034
Identities = 19/33 (57%), Positives = 30/33 (90%)
Frame = -1 / -1
Query: 1050 GKLYEYASDSRMDKILERYERYSYAEKALISAE 952
GKL+EY++++ M+KILER+ERYSYAE+ L++ +
Sbjct: 803 GKLFEYSTNACMEKILERHERYSYAERQLVATD 705
>gb|BU869954.1|BU869954 Q006E04 Populus flower cDNA library Populus trichocarpa cDNA 5 prime,
mRNA sequence
Length = 713
Score = 112 bits (240), Expect(2) = 8e-034
Identities = 45/63 (71%), Positives = 56/63 (88%)
Frame = -1 / +3
Query: 1215 RQAKMGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGKLYE 1036
R KMGRGKV+LKRIEN +RQVTFSKRRNGLLKKA E+S+LC+AEV++I+FSP GK Y+
Sbjct: 54 R*TKMGRGKVELKRIENSTSRQVTFSKRRNGLLKKAFELSILCEAEVSLIIFSPTGKFYQ 233
Query: 1035 YAS 1027
++S
Sbjct: 234 FSS 242
Score = 51.9 bits (107), Expect(2) = 8e-034
Identities = 25/82 (30%), Positives = 41/82 (50%)
Frame = -1 / +3
Query: 933 WCHEYRKLKAKIETIQRCHKHLMGEDLESLNPKXXXXXXXXXXXXLKHIRSRKSHLMAES 754
W E +L+ I + +H +GED+ L K ++ IR +K ++E
Sbjct: 330 WRCEIEELRRTINKTEAQLRHFIGEDIAPLGLKELKQLERQLKTGVERIRCKKKRAISEH 509
Query: 753 ISELQKKERSLQEENKALQKEL 688
I L+ ++R+LQEEN LQK +
Sbjct: 510 IKLLKSEQRALQEENARLQKRV 575
>gb|BI139220.1|BI139220 F126P60Y Populus flower cDNA library Populus trichocarpa cDNA, mRNA
sequence
Length = 457
Score = 130 bits (278), Expect(2) = 1e-033
Identities = 53/102 (51%), Positives = 74/102 (72%)
Frame = -1 / +1
Query: 1077 VAVIVFSPKGKLYEYASDSRMDKILERYERYSYAEKALISAESESEGNWCHEYRKLKAKI 898
VA+IVFS KGKL+EY++D M+KILERYERYSYAE+ L++ + +S+GNW EY +LKAK+
Sbjct: 133 VALIVFSHKGKLFEYSTDDSMEKILERYERYSYAERQLVATDLDSQGNWTLEYNRLKAKV 312
Query: 897 ETIQRCHKHLMGEDLESLNPKXXXXXXXXXXXXLKHIRSRKS 772
E +QR H++ +GEDL+S++ K LKHI K+
Sbjct: 313 ELLQRNHRNYLGEDLDSMSLKELQNLEQQIDTALKHIGREKT 438
Score = 91.3 bits (193), Expect(2) = 5e-026
Identities = 40/53 (75%), Positives = 45/53 (84%)
Frame = -1 / +2
Query: 1206 KMGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKG 1048
+MGRG+VQLKRIENKINRQVTFSKRR GLLKKA+EISVLCDA + + KG
Sbjct: 5 EMGRGRVQLKRIENKINRQVTFSKRRTGLLKKANEISVLCDARLL*LSSLTKG 163
Score = 47.3 bits (97), Expect(2) = 5e-026
Identities = 31/80 (38%), Positives = 46/80 (57%)
Frame = -3 / +3
Query: 1054 QGQALRVRLRLPHGQNSRTL*AIFLC*KGSYFS*I*K*GKLVPRIQETEGQN*DHTKMPQ 875
Q +AL + R HG+++ TL IFLC + + * * G+L P + + +G+ * T+ P
Sbjct: 156 QREAL*ILHR*FHGKDT*TLREIFLCREATSCH*S*FTGELDPGV*QAQGKG*TSTEKP* 335
Query: 874 APDGRGSRVFESKRAPTTRA 815
G GSR+ ES+RA RA
Sbjct: 336 ELFGGGSRLHESQRATELRA 395
Score = 34.1 bits (68), Expect(2) = 1e-033
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = -3 / +1
Query: 1204 DGARQGAAEADREQDKPAGDLLQAPERAAEE 1112
DG G+ E +REQD+PAG++ Q EE
Sbjct: 7 DGKG*GSVEENREQDQPAGNIFQKENWIVEE 99
>gb|BU883349.1|BU883349 UM89TD10 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 558
Score = 141 bits (302), Expect(2) = 2e-033
Identities = 59/91 (64%), Positives = 74/91 (81%)
Frame = -1 / +1
Query: 1203 MGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGKLYEYASD 1024
MGRG+V+LKRIENKINRQVTF+KRRNGLLKKA+E+SVLCDAEVA+I+FS +GKLYE+ S
Sbjct: 37 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCST 216
Query: 1023 SRMDKILERYERYSYAEKALISAESESEGNW 931
S M K LERY++ SY + + E E ++
Sbjct: 217 SNMLKTLERYQKCSYGAEEVNKPAKELESSY 309
Score = 22.6 bits (43), Expect(2) = 2e-033
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = -2 / +2
Query: 923 NTGN*RPKLRPYKDATST*WERI*SL*IQK 834
+T *+ LRPY + T ER L*I K
Sbjct: 314 ST*K*KQDLRPYNELRGTFLERTSDL*IPK 403
>gb|DT493519.1|DT493519 WS0111.BR_J17 PT-P-FL-A-2 Populus trichocarpa cDNA clone WS0111_J17
5', mRNA sequence
Length = 592
Score = 105 bits (224), Expect(2) = 2e-033
Identities = 41/57 (71%), Positives = 52/57 (91%)
Frame = -1 / +1
Query: 1197 RGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGKLYEYAS 1027
RGKV+LKRIEN +RQVTFSKRRNGLLKKA E+S+LC+AEV++I+FSP GK Y+++S
Sbjct: 22 RGKVELKRIENSASRQVTFSKRRNGLLKKAFELSILCEAEVSLIIFSPSGKFYQFSS 192
Score = 57.9 bits (120), Expect(2) = 2e-033
Identities = 28/84 (33%), Positives = 44/84 (52%)
Frame = -1 / +1
Query: 933 WCHEYRKLKAKIETIQRCHKHLMGEDLESLNPKXXXXXXXXXXXXLKHIRSRKSHLMAES 754
W E +L+ I + +H +GED+ L K ++ IRS+K +++E
Sbjct: 280 WRCEIEELRRTITKTEAQLRHFIGEDIAPLGLKELKQLERQLKTGVERIRSKKKRVISEH 459
Query: 753 ISELQKKERSLQEENKALQKELSE 682
I L+ ++R+LQEEN LQK L E
Sbjct: 460 IKLLKSEQRALQEENARLQKRLHE 531
>gb|BU895896.1|BU895896 X032F06 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 753
Score = 106 bits (226), Expect(2) = 5e-033
Identities = 43/63 (68%), Positives = 54/63 (85%)
Frame = -1 / +3
Query: 1215 RQAKMGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGKLYE 1036
R K GRGKV+L RIEN +RQVTFSKRRNGLLKKA E+S+LC+AEV++I+FSP GK Y+
Sbjct: 3 RGDKTGRGKVELIRIENSASRQVTFSKRRNGLLKKAFELSILCEAEVSLIIFSPTGKFYQ 182
Query: 1035 YAS 1027
++S
Sbjct: 183 FSS 191
Score = 55.6 bits (115), Expect(2) = 5e-033
Identities = 27/84 (32%), Positives = 42/84 (50%)
Frame = -1 / +3
Query: 933 WCHEYRKLKAKIETIQRCHKHLMGEDLESLNPKXXXXXXXXXXXXLKHIRSRKSHLMAES 754
W E +L+ I + +H +GED+ L K ++ IR +K ++E
Sbjct: 279 WRCEIEELRRTINKTEAQLRHFIGEDIAPLGLKELKQLERQLKTGVERIRCKKKRAISEH 458
Query: 753 ISELQKKERSLQEENKALQKELSE 682
I L+ ++R+LQEEN LQK L E
Sbjct: 459 IKLLKSEQRALQEENARLQKRLQE 530
>gb|BU869391.1|BU869391 M129E09 Populus flower cDNA library Populus trichocarpa cDNA 5 prime,
mRNA sequence
Length = 665
Score = 138 bits (296), Expect(2) = 1e-032
Identities = 58/91 (63%), Positives = 73/91 (80%)
Frame = -1 / +1
Query: 1203 MGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGKLYEYASD 1024
MGRG+V+LKRIENKINRQVTF+KRRNGLLKKA+E+SVLCDAEVA+I+FS +GKLYE+ S
Sbjct: 34 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCST 213
Query: 1023 SRMDKILERYERYSYAEKALISAESESEGNW 931
M K LERY++ SY + + E E ++
Sbjct: 214 FNMLKTLERYQKCSYGAEEVNKPAKELESSY 306
Score = 22.6 bits (43), Expect(2) = 1e-032
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = -2 / +2
Query: 923 NTGN*RPKLRPYKDATST*WERI*SL*IQK 834
+T *+ LRPY + T ER L*I K
Sbjct: 311 ST*K*KQDLRPYNELRGTFLERTSDL*IPK 400
>gb|BU875452.1|BU875452 V007C11 Populus flower cDNA library Populus trichocarpa cDNA 5 prime,
mRNA sequence
Length = 697
Score = 141 bits (302), Expect = 1e-032
Identities = 59/91 (64%), Positives = 74/91 (81%)
Frame = -1 / +2
Query: 1203 MGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGKLYEYASD 1024
MGRG+V+LKRIENKINRQVTF+KRRNGLLKKA+E+SVLCDAEVA+I+FS +GKLYE+ S
Sbjct: 278 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCST 457
Query: 1023 SRMDKILERYERYSYAEKALISAESESEGNW 931
S M K LERY++ SY + + E E ++
Sbjct: 458 SNMLKTLERYQKCSYGAEEVNKPAKELESSY 550
>gb|AF185574.2| Populus tremuloides transcription factor MAGL4 mRNA, complete cds
Length = 1195
Score = 141 bits (302), Expect = 1e-032
Identities = 59/91 (64%), Positives = 74/91 (81%)
Frame = -1 / +1
Query: 1203 MGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGKLYEYASD 1024
MGRG+V+LKRIENKINRQVTF+KRRNGLLKKA+E+SVLCDAEVA+I+FS +GKLYE+ S
Sbjct: 232 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCST 411
Query: 1023 SRMDKILERYERYSYAEKALISAESESEGNW 931
S M K LERY++ SY + + E E ++
Sbjct: 412 SNMLKTLERYQKCSYGAEEVNKPAKELENSY 504
>gb|CK101482.1|CK101482 F070P21.5pR Populus flower cDNA library Populus trichocarpa cDNA
clone F070P21 5', mRNA sequence
Length = 282
Score = 136 bits (291), Expect = 3e-031
Identities = 58/82 (70%), Positives = 67/82 (81%)
Frame = -1 / +1
Query: 1155 RQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGKLYEYASDSRMDKILERYERYSYA 976
RQVTFSKRR GLLKKAHEISVLCDA+VAVIVFS KGKL+EY+SDS M+ ILERYER SYA
Sbjct: 1 RQVTFSKRRTGLLKKAHEISVLCDADVAVIVFSTKGKLFEYSSDSSMESILERYERCSYA 180
Query: 975 EKALISAESESEGNWCHEYRKL 910
E+ + E +G+W E+ KL
Sbjct: 181 EQQFVPHGPEHQGSWFMEHPKL 246
>gb|DN491294.1|DN491294 UM83TF04.3pR Populus female catkins cDNA library Populus trichocarpa
cDNA clone UM83TF04 3', mRNA sequence
Length = 813
Score = 133 bits (286), Expect = 2e-030
Identities = 61/158 (38%), Positives = 98/158 (62%)
Frame = -1 / -2
Query: 1146 TFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGKLYEYASDSRMDKILERYERYSYAEKA 967
TF KRRNGLLKKA+E+SVLCDAEVA+IVFS +G+LYEYA+++ + ++RY++ S
Sbjct: 701 TFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNNSIRSTIDRYKKASSDSSN 522
Query: 966 LISAESESEGNWCHEYRKLKAKIETIQRCHKHLMGEDLESLNPKXXXXXXXXXXXXLKHI 787
S + + E KL+ +I+ +Q ++HLMG+ + +L+ K + I
Sbjct: 521 ASSITEINAQYYQQESAKLRQQIQMLQNSNRHLMGDAVSNLSVKELKQLENRLERGITRI 342
Query: 786 RSRKSHLMAESISELQKKERSLQEENKALQKELSERQK 673
RS+K L+ I LQK+E L+ E+ L+ +++E ++
Sbjct: 341 RSKKHELLLAEIEYLQKREIELENESVCLRTKIAEVER 228
>gb|DT521357.1|DT521357 WS02034.B21_B05 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02034_B05 3', mRNA sequence
Length = 783
Score = 95.0 bits (201), Expect(2) = 4e-030
Identities = 38/61 (62%), Positives = 49/61 (80%)
Frame = -1 / +2
Query: 1203 MGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGKLYEYASD 1024
M R K+++KRI N RQVTFSKRR GL KKA E+S+LC+A+VA++VFS GKLY+Y+S
Sbjct: 206 MAREKIEIKRIANASARQVTFSKRRRGLFKKAQELSILCEADVALVVFSSTGKLYDYSSS 385
Query: 1023 S 1021
S
Sbjct: 386 S 388
Score = 57.4 bits (119), Expect(2) = 4e-030
Identities = 26/85 (30%), Positives = 49/85 (57%)
Frame = -1 / +2
Query: 927 HEYRKLKAKIETIQRCHKHLMGEDLESLNPKXXXXXXXXXXXXLKHIRSRKSHLMAESIS 748
H+ +++K +IE I + +++ GE+LE L+ K L +RS+K + + I+
Sbjct: 470 HDLKRIKQQIEDISQTLRNIHGEELEKLSLKDLQQLEEQLEAGLSKVRSQKGENILKEIN 649
Query: 747 ELQKKERSLQEENKALQKELSERQK 673
ELQ+K + EEN L++E+ E ++
Sbjct: 650 ELQQKGIRIIEENSKLRREIKEAER 724
Database: Populus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:49 PM
Number of letters in database: 203,408,664
Number of sequences in database: 369,679
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 460,948,705
Number of Sequences: 369679
Number of extensions: 5302815
Number of successful extensions: 27514
Number of sequences better than 1.0e-020: 136
length of database: 67,802,888
effective HSP length: 53
effective length of database: 48,209,901
effective search space used: 17837663370
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)