TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3696537.2.1
(592 letters)
Database: Populus_nucl_with_EST.fasta
369,679 sequences; 203,408,664 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CV246467.1|CV246467 WS01110.B21_J17 PT-P-FL-A-2 Populus ... 231 3e-060
gb|CV274944.1|CV274944 WS0174.B21.1_O02 PTxD-NR-A-8 Populus... 228 2e-059
gb|CX169902.1|CX169902 E05_69-29_09.ab1 leaf inoculated wit... 228 2e-059
gb|CX176201.1|CX176201 E09_69-21_09.ab1 leaf inoculated wit... 228 2e-059
gb|BP934359.1|BP934359 BP934359 full-length enriched poplar... 226 1e-058
gb|CN520196.1|CN520196 GQ0108.B3_D07 GQ010 Populus trichoca... 222 1e-057
gb|CV243219.1|CV243219 WS02518.B21_D22 PT-MB-N-A-15 Populus... 133 8e-052
gb|DT514302.1|DT514302 WS02424.B21_H04 PTxD-ICC-N-A-14 Popu... 133 8e-052
gb|CV230444.1|CV230444 WS01916.B21_J06 PT-DX-N-A-10 Populus... 133 8e-052
gb|BU885111.1|BU885111 R020G10 Populus root cDNA library Po... 201 4e-051
gb|CV232647.1|CV232647 WS0198.B21_D24 PT-DX-N-A-10 Populus ... 200 5e-051
gb|DT470321.1|DT470321 WS01920.C21_I12 PT-DX-N-A-10 Populus... 200 5e-051
gb|DT518094.1|DT518094 WS02436.B21_C23 PTxD-ICC-N-A-14 Popu... 200 5e-051
gb|AJ771301.1|AJ771301 AJ771301 Populus euphratica leaf 3-6... 198 2e-050
gb|BP931992.1|BP931992 BP931992 full-length enriched poplar... 194 3e-049
gb|AJ780615.1|AJ780615 AJ780615 Populus euphratica leaf 3-6... 146 6e-046
gb|AJ771403.1|AJ771403 AJ771403 Populus euphratica leaf 3-6... 166 1e-040
gb|DT505695.1|DT505695 WS01811.C21_J20 PTxD-IL-N-A-9 Populu... 104 2e-035
gb|BU813923.1|BU813923 N022F11 Populus bark cDNA library Po... 98 2e-034
gb|DN487113.1|DN487113 Q009I10.3pR Populus dormant bud cDNA... 100 2e-033
gb|BU816161.1|BU816161 N061D02 Populus bark cDNA library Po... 140 6e-033
gb|DN486016.1|DN486016 N061D02.3pR Populus bark cDNA librar... 140 6e-033
gb|DN495565.1|DN495565 N061D02.5pR Populus bark cDNA librar... 140 6e-033
gb|DN496718.1|DN496718 Q009I10.5pR Populus dormant bud cDNA... 100 8e-033
gb|CV256668.1|CV256668 WS0244.B21_H19 PTxD-ICC-N-A-14 Popul... 108 8e-033
gb|DT506791.1|DT506791 WS02416.BR_I11 PTxD-ICC-N-A-14 Popul... 108 1e-032
gb|DT511460.1|DT511460 WS02416.B21_I11 PTxD-ICC-N-A-14 Popu... 108 1e-032
gb|CV254547.1|CV254547 WS0241.B21_I11 PTxD-ICC-N-A-14 Popul... 108 1e-032
gb|DT516082.1|DT516082 WS02430.B21_F16 PTxD-ICC-N-A-14 Popu... 108 1e-032
gb|DT519288.1|DT519288 WS02440.B21_P20 PTxD-ICC-N-A-14 Popu... 108 1e-032
gb|DT519202.1|DT519202 WS02440.B21_K09 PTxD-ICC-N-A-14 Popu... 105 1e-031
gb|DT520892.1|DT520892 WS02448.B21_N10 PTxD-ICC-N-A-14 Popu... 105 1e-030
gb|CX174046.1|CX174046 D07_69-64_07.ab1 leaf inoculated wit... 124 4e-028
gb|DN498398.1|DN498398 S023D04.5pR Populus imbibed seed cDN... 113 8e-025
gb|CV268198.1|CV268198 WS0204.B21_N04 PTxN-IB-N-A-11 Populu... 106 9e-023
gb|BU815036.1|BU815036 N036D06 Populus bark cDNA library Po... 88 2e-021
gb|DT486940.1|DT486940 WS02532.B21_F16 PT-MB-N-A-15 Populus... 77 3e-021
>gb|CV246467.1|CV246467 WS01110.B21_J17 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01110_J17 3', mRNA sequence
Length = 718
Score = 231 bits (499), Expect = 3e-060
Identities = 83/118 (70%), Positives = 100/118 (84%)
Frame = -2 / -2
Query: 591 MHHNCPVCMEYLFDSMKAISVLHCGHTIHLECLYEMRAHQQFSCPVCLRSACNMSDIWQK 412
MHHNCPVC E+LFD+M+ I+VL CGHTIHLECL EM H ++SCPVC +S C+M+ +W+K
Sbjct: 570 MHHNCPVCFEFLFDTMRDITVLPCGHTIHLECLKEMEQHYRYSCPVCSKSICDMTRLWKK 391
Query: 411 LDQQVAASPMPAIYQKKMVWILCNDCGVTSNVQFHILAHKCPGCSSYNTRQTRGDPAA 238
LDQ++AA+PMP YQ KMVWILCNDCG S+VQFHI+AHKC C+SYNTRQTRG PAA
Sbjct: 390 LDQEIAATPMPETYQNKMVWILCNDCGANSHVQFHIVAHKCLRCNSYNTRQTRGGPAA 217
Score = 143 bits (307), Expect = 9e-034
Identities = 68/118 (57%), Positives = 78/118 (66%)
Frame = +2 / +2
Query: 239 AAGSPLVCRVL*ELHPGHLCAKMWNCTLDVTPQSLQRIHTIFF**IAGIGDAATC*SSFC 418
AAG P VC VL ELH HLCA MWN T + PQSLQRIHTI F ++GIG AA *SSF
Sbjct: 218 AAGPPRVCLVLYELHLKHLCATMWNWTWEFAPQSLQRIHTILFWYVSGIGVAAIS*SSFF 397
Query: 419 QMSDMLQADLRHTGHENCWCALIS*RHSRWMVCPQWSTLIAFIESNRYSMQTGQL*CI 592
+ DL TGHE C IS +HS+ +VCPQ +T+I+ I SNR S QTGQL CI
Sbjct: 398 HNLVISHMDLEQTGHEYR*CCSISFKHSKCIVCPQGNTVISLIVSNRNSKQTGQLWCI 571
>gb|CV274944.1|CV274944 WS0174.B21.1_O02 PTxD-NR-A-8 Populus trichocarpa x Populus
deltoides cDNA clone WS0174_O02 3', mRNA sequence
Length = 940
Score = 228 bits (493), Expect = 2e-059
Identities = 82/118 (69%), Positives = 99/118 (83%)
Frame = -2 / -2
Query: 591 MHHNCPVCMEYLFDSMKAISVLHCGHTIHLECLYEMRAHQQFSCPVCLRSACNMSDIWQK 412
MHHNCPVC E+LFD+M+ I+VL CGHTIHLECL EM H ++SCPVC +S C+M+ +W+K
Sbjct: 633 MHHNCPVCFEFLFDTMRDITVLRCGHTIHLECLKEMEQHYRYSCPVCSKSICDMTRLWKK 454
Query: 411 LDQQVAASPMPAIYQKKMVWILCNDCGVTSNVQFHILAHKCPGCSSYNTRQTRGDPAA 238
LDQ++AA+ MP YQ KMVWILCNDCG S+VQFHI+AHKC C+SYNTRQTRG PAA
Sbjct: 453 LDQEIAATSMPETYQNKMVWILCNDCGANSHVQFHIVAHKCLRCNSYNTRQTRGGPAA 280
Score = 140 bits (301), Expect = 6e-033
Identities = 68/118 (57%), Positives = 77/118 (65%)
Frame = +2 / +2
Query: 239 AAGSPLVCRVL*ELHPGHLCAKMWNCTLDVTPQSLQRIHTIFF**IAGIGDAATC*SSFC 418
AAG P VC VL ELH HLCA MWN T + PQSLQRIHTI F ++GI AA *SSF
Sbjct: 281 AAGPPRVCLVLYELHLKHLCATMWNWTWEFAPQSLQRIHTILFWYVSGIEVAAIS*SSFF 460
Query: 419 QMSDMLQADLRHTGHENCWCALIS*RHSRWMVCPQWSTLIAFIESNRYSMQTGQL*CI 592
+ DL TGHE C IS +HSR +VCPQ +T+I+ I SNR S QTGQL CI
Sbjct: 461 HNLVISHMDLEQTGHEYR*CCSISFKHSRCIVCPQRNTVISLIVSNRNSKQTGQLWCI 634
>gb|CX169902.1|CX169902 E05_69-29_09.ab1 leaf inoculated with Marssonia pathogen of Populus
deltoides Populus deltoides cDNA, mRNA sequence
Length = 710
Score = 228 bits (493), Expect = 2e-059
Identities = 82/118 (69%), Positives = 99/118 (83%)
Frame = -2 / +2
Query: 591 MHHNCPVCMEYLFDSMKAISVLHCGHTIHLECLYEMRAHQQFSCPVCLRSACNMSDIWQK 412
MHHNCPVC E+LFD+M+ I+VL CGHTIHLECL EM H ++SCPVC +S C+M+ +W+K
Sbjct: 98 MHHNCPVCFEFLFDTMRDITVLRCGHTIHLECLKEMEQHYRYSCPVCSKSICDMTRLWKK 277
Query: 411 LDQQVAASPMPAIYQKKMVWILCNDCGVTSNVQFHILAHKCPGCSSYNTRQTRGDPAA 238
LDQ++AA+ MP YQ KMVWILCNDCG S+VQFHI+AHKC C+SYNTRQTRG PAA
Sbjct: 278 LDQEIAATSMPETYQNKMVWILCNDCGANSHVQFHIVAHKCLRCNSYNTRQTRGGPAA 451
Score = 140 bits (301), Expect = 6e-033
Identities = 68/118 (57%), Positives = 77/118 (65%)
Frame = +2 / -3
Query: 239 AAGSPLVCRVL*ELHPGHLCAKMWNCTLDVTPQSLQRIHTIFF**IAGIGDAATC*SSFC 418
AAG P VC VL ELH HLCA MWN T + PQSLQRIHTI F ++GI AA *SSF
Sbjct: 450 AAGPPRVCLVLYELHLKHLCATMWNWTWEFAPQSLQRIHTILFWYVSGIEVAAIS*SSFF 271
Query: 419 QMSDMLQADLRHTGHENCWCALIS*RHSRWMVCPQWSTLIAFIESNRYSMQTGQL*CI 592
+ DL TGHE C IS +HSR +VCPQ +T+I+ I SNR S QTGQL CI
Sbjct: 270 HNLVISHMDLEQTGHEYR*CCSISFKHSRCIVCPQRNTVISLIVSNRNSKQTGQLWCI 97
>gb|CX176201.1|CX176201 E09_69-21_09.ab1 leaf inoculated with Marssonia pathogen of Populus
deltoides Populus deltoides cDNA, mRNA sequence
Length = 729
Score = 228 bits (493), Expect = 2e-059
Identities = 82/118 (69%), Positives = 99/118 (83%)
Frame = -2 / -3
Query: 591 MHHNCPVCMEYLFDSMKAISVLHCGHTIHLECLYEMRAHQQFSCPVCLRSACNMSDIWQK 412
MHHNCPVC E+LFD+M+ I+VL CGHTIHLECL EM H ++SCPVC +S C+M+ +W+K
Sbjct: 583 MHHNCPVCFEFLFDTMRDITVLRCGHTIHLECLKEMEQHYRYSCPVCSKSICDMTRLWKK 404
Query: 411 LDQQVAASPMPAIYQKKMVWILCNDCGVTSNVQFHILAHKCPGCSSYNTRQTRGDPAA 238
LDQ++AA+ MP YQ KMVWILCNDCG S+VQFHI+AHKC C+SYNTRQTRG PAA
Sbjct: 403 LDQEIAATSMPETYQNKMVWILCNDCGANSHVQFHIVAHKCLRCNSYNTRQTRGGPAA 230
Score = 140 bits (301), Expect = 6e-033
Identities = 68/118 (57%), Positives = 77/118 (65%)
Frame = +2 / +3
Query: 239 AAGSPLVCRVL*ELHPGHLCAKMWNCTLDVTPQSLQRIHTIFF**IAGIGDAATC*SSFC 418
AAG P VC VL ELH HLCA MWN T + PQSLQRIHTI F ++GI AA *SSF
Sbjct: 231 AAGPPRVCLVLYELHLKHLCATMWNWTWEFAPQSLQRIHTILFWYVSGIEVAAIS*SSFF 410
Query: 419 QMSDMLQADLRHTGHENCWCALIS*RHSRWMVCPQWSTLIAFIESNRYSMQTGQL*CI 592
+ DL TGHE C IS +HSR +VCPQ +T+I+ I SNR S QTGQL CI
Sbjct: 411 HNLVISHMDLEQTGHEYR*CCSISFKHSRCIVCPQRNTVISLIVSNRNSKQTGQLWCI 584
>gb|BP934359.1|BP934359 BP934359 full-length enriched poplar cDNA library Populus nigra
cDNA clone PnFL1-064_B03.r 3', mRNA sequence
Length = 661
Score = 226 bits (487), Expect = 1e-058
Identities = 82/118 (69%), Positives = 99/118 (83%)
Frame = -2 / -2
Query: 591 MHHNCPVCMEYLFDSMKAISVLHCGHTIHLECLYEMRAHQQFSCPVCLRSACNMSDIWQK 412
MHHN PVC E+LFD+M+ I+VL CGHTIHLECL EM H ++SCPVC +S C+M+ +W+K
Sbjct: 624 MHHNWPVCSEFLFDTMRDITVLPCGHTIHLECLKEMEQHYRYSCPVCSKSICDMTRLWKK 445
Query: 411 LDQQVAASPMPAIYQKKMVWILCNDCGVTSNVQFHILAHKCPGCSSYNTRQTRGDPAA 238
LDQ++AA+PMP YQ KMVWILCNDCG S+VQFHI+AHKC C+SYNTRQTRG PAA
Sbjct: 444 LDQEIAATPMPQTYQNKMVWILCNDCGANSHVQFHIVAHKCLRCNSYNTRQTRGGPAA 271
Score = 138 bits (296), Expect = 3e-032
Identities = 67/118 (56%), Positives = 76/118 (64%)
Frame = +2 / +2
Query: 239 AAGSPLVCRVL*ELHPGHLCAKMWNCTLDVTPQSLQRIHTIFF**IAGIGDAATC*SSFC 418
AAG P VC VL ELH HLCA MWN T + PQSLQRIHTI F + GIG AA *SSF
Sbjct: 272 AAGPPRVCLVLYELHLKHLCATMWNWTWEFAPQSLQRIHTILFWYVWGIGVAAIS*SSFF 451
Query: 419 QMSDMLQADLRHTGHENCWCALIS*RHSRWMVCPQWSTLIAFIESNRYSMQTGQL*CI 592
+ DL TGHE C IS +HS+ +VCPQ +T+I+ I SNR S TGQL CI
Sbjct: 452 HNLVISHMDLEQTGHEYR*CCSISFKHSKCIVCPQGNTVISLIVSNRNSEXTGQLWCI 625
>gb|CN520196.1|CN520196 GQ0108.B3_D07 GQ010 Populus trichocarpa x Populus deltoides cDNA
clone GQ0108_D07 5', mRNA sequence
Length = 700
Score = 222 bits (480), Expect = 1e-057
Identities = 80/118 (67%), Positives = 96/118 (81%)
Frame = -2 / +2
Query: 591 MHHNCPVCMEYLFDSMKAISVLHCGHTIHLECLYEMRAHQQFSCPVCLRSACNMSDIWQK 412
MHHNCPVC E FD+M+ I+VL CGHTIHLECL EM H ++SCPVC +S C+M+ +W+K
Sbjct: 86 MHHNCPVCFEXXFDTMRDITVLPCGHTIHLECLKEMEQHYRYSCPVCSKSICDMTRLWKK 265
Query: 411 LDQQVAASPMPAIYQKKMVWILCNDCGVTSNVQFHILAHKCPGCSSYNTRQTRGDPAA 238
LDQ++AA+PMP YQ KMVW CNDCG S+VQFHI+AHKC C+SYNTRQTRG PAA
Sbjct: 266 LDQEIAATPMPETYQNKMVWXXCNDCGANSHVQFHIVAHKCLRCNSYNTRQTRGGPAA 439
Score = 138 bits (295), Expect = 4e-032
Identities = 66/118 (55%), Positives = 76/118 (64%)
Frame = +2 / -2
Query: 239 AAGSPLVCRVL*ELHPGHLCAKMWNCTLDVTPQSLQRIHTIFF**IAGIGDAATC*SSFC 418
AAG P VC VL ELH HLCA MWN T + PQSLQ IHTI F ++GIG AA *SSF
Sbjct: 438 AAGPPRVCLVLYELHLKHLCATMWNWTWEFAPQSLQXIHTILFWYVSGIGVAAIS*SSFF 259
Query: 419 QMSDMLQADLRHTGHENCWCALIS*RHSRWMVCPQWSTLIAFIESNRYSMQTGQL*CI 592
+ DL TGHE C IS +HS+ +VCPQ +T+I+ I SN S QTGQL CI
Sbjct: 258 HNLVISHMDLEQTGHEYR*CCSISFKHSKCIVCPQGNTVISLIVSNXNSKQTGQLWCI 85
>gb|CV243219.1|CV243219 WS02518.B21_D22 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02518_D22 3', mRNA sequence
Length = 944
Score = 133 bits (284), Expect(2) = 8e-052
Identities = 47/76 (61%), Positives = 61/76 (80%)
Frame = -2 / +1
Query: 591 MHHNCPVCMEYLFDSMKAISVLHCGHTIHLECLYEMRAHQQFSCPVCLRSACNMSDIWQK 412
MHHNCPVC E+LF++ K I VL CGHTIHLEC+ EM+ H Q++CP+C +S C+MS +W+K
Sbjct: 505 MHHNCPVCFEFLFETTKDIIVLPCGHTIHLECVKEMQQHFQYACPLCSKSYCDMSRVWKK 684
Query: 411 LDQQVAASPMPAIYQK 364
LDQQVA +PMP + K
Sbjct: 685 LDQQVALTPMPQMLNK 732
Score = 90.9 bits (192), Expect(2) = 8e-052
Identities = 35/51 (68%), Positives = 39/51 (76%)
Frame = -2 / +1
Query: 363 KMVWILCNDCGVTSNVQFHILAHKCPGCSSYNTRQTRGDPAACSRV*EQIK 211
KMVWILCNDCG TS V FHI+AHKC C+SYNT+QTR P CS E+IK
Sbjct: 730 KMVWILCNDCGETSEVNFHIVAHKCLKCNSYNTKQTRVGPPPCSSSIEEIK 882
Score = 75.8 bits (159), Expect(2) = 6e-027
Identities = 36/71 (50%), Positives = 42/71 (59%)
Frame = +2 / -1
Query: 380 GIGDAATC*SSFCQMSDMLQADLRHTGHENCWCALIS*RHSRWMVCPQWSTLIAFIESNR 559
G+G ATC*SSF DM Q D G C IS HS+ MVCPQ T+++F+ S R
Sbjct: 716 GMGVNATC*SSFFHTRDMSQYDFEQRGQAY*KCCCISLTHSK*MVCPQGKTIMSFVVSKR 537
Query: 560 YSMQTGQL*CI 592
S QTGQL CI
Sbjct: 536 NSKQTGQLWCI 504
Score = 64.8 bits (135), Expect(2) = 6e-027
Identities = 30/52 (57%), Positives = 32/52 (61%)
Frame = +2 / -1
Query: 212 FICSQTLEHAAGSPLVCRVL*ELHPGHLCAKMWNCTLDVTPQSLQRIHTIFF 367
FI S E G VC VL ELH HLCA +W T DV+PQSLQRI TI F
Sbjct: 881 FISSILEEQGGGPTRVCFVLYELHFRHLCATIWKFTSDVSPQSLQRIQTILF 726
>gb|DT514302.1|DT514302 WS02424.B21_H04 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02424_H04 3', mRNA sequence
Length = 820
Score = 133 bits (284), Expect(2) = 8e-052
Identities = 47/76 (61%), Positives = 61/76 (80%)
Frame = -2 / -2
Query: 591 MHHNCPVCMEYLFDSMKAISVLHCGHTIHLECLYEMRAHQQFSCPVCLRSACNMSDIWQK 412
MHHNCPVC E+LF++ K I VL CGHTIHLEC+ EM+ H Q++CP+C +S C+MS +W+K
Sbjct: 732 MHHNCPVCFEFLFETTKDIIVLPCGHTIHLECVKEMQQHFQYACPLCSKSYCDMSRVWKK 553
Query: 411 LDQQVAASPMPAIYQK 364
LDQQVA +PMP + K
Sbjct: 552 LDQQVALTPMPQMLNK 505
Score = 90.9 bits (192), Expect(2) = 8e-052
Identities = 35/51 (68%), Positives = 39/51 (76%)
Frame = -2 / -2
Query: 363 KMVWILCNDCGVTSNVQFHILAHKCPGCSSYNTRQTRGDPAACSRV*EQIK 211
KMVWILCNDCG TS V FHI+AHKC C+SYNT+QTR P CS E+IK
Sbjct: 507 KMVWILCNDCGETSEVNFHIVAHKCLKCNSYNTKQTRVGPPPCSSSIEEIK 355
Score = 75.8 bits (159), Expect(2) = 6e-027
Identities = 36/71 (50%), Positives = 42/71 (59%)
Frame = +2 / +2
Query: 380 GIGDAATC*SSFCQMSDMLQADLRHTGHENCWCALIS*RHSRWMVCPQWSTLIAFIESNR 559
G+G ATC*SSF DM Q D G C IS HS+ MVCPQ T+++F+ S R
Sbjct: 521 GMGVNATC*SSFFHTRDMSQYDFEQRGQAY*KCCCISLTHSK*MVCPQGKTIMSFVVSKR 700
Query: 560 YSMQTGQL*CI 592
S QTGQL CI
Sbjct: 701 NSKQTGQLWCI 733
Score = 64.8 bits (135), Expect(2) = 6e-027
Identities = 30/52 (57%), Positives = 32/52 (61%)
Frame = +2 / +2
Query: 212 FICSQTLEHAAGSPLVCRVL*ELHPGHLCAKMWNCTLDVTPQSLQRIHTIFF 367
FI S E G VC VL ELH HLCA +W T DV+PQSLQRI TI F
Sbjct: 356 FISSILEEQGGGPTRVCFVLYELHFRHLCATIWKFTSDVSPQSLQRIQTILF 511
>gb|CV230444.1|CV230444 WS01916.B21_J06 PT-DX-N-A-10 Populus trichocarpa cDNA clone
WS01916_J06 3', mRNA sequence
Length = 748
Score = 133 bits (284), Expect(2) = 8e-052
Identities = 47/76 (61%), Positives = 61/76 (80%)
Frame = -2 / -1
Query: 591 MHHNCPVCMEYLFDSMKAISVLHCGHTIHLECLYEMRAHQQFSCPVCLRSACNMSDIWQK 412
MHHNCPVC E+LF++ K I VL CGHTIHLEC+ EM+ H Q++CP+C +S C+MS +W+K
Sbjct: 706 MHHNCPVCFEFLFETTKDIIVLPCGHTIHLECVKEMQQHFQYACPLCSKSYCDMSRVWKK 527
Query: 411 LDQQVAASPMPAIYQK 364
LDQQVA +PMP + K
Sbjct: 526 LDQQVALTPMPQMLNK 479
Score = 90.9 bits (192), Expect(2) = 8e-052
Identities = 35/51 (68%), Positives = 39/51 (76%)
Frame = -2 / -1
Query: 363 KMVWILCNDCGVTSNVQFHILAHKCPGCSSYNTRQTRGDPAACSRV*EQIK 211
KMVWILCNDCG TS V FHI+AHKC C+SYNT+QTR P CS E+IK
Sbjct: 481 KMVWILCNDCGETSEVNFHIVAHKCLKCNSYNTKQTRVGPPPCSSSIEEIK 329
Score = 75.8 bits (159), Expect(2) = 6e-027
Identities = 36/71 (50%), Positives = 42/71 (59%)
Frame = +2 / +3
Query: 380 GIGDAATC*SSFCQMSDMLQADLRHTGHENCWCALIS*RHSRWMVCPQWSTLIAFIESNR 559
G+G ATC*SSF DM Q D G C IS HS+ MVCPQ T+++F+ S R
Sbjct: 495 GMGVNATC*SSFFHTRDMSQYDFEQRGQAY*KCCCISLTHSK*MVCPQGKTIMSFVVSKR 674
Query: 560 YSMQTGQL*CI 592
S QTGQL CI
Sbjct: 675 NSKQTGQLWCI 707
Score = 64.8 bits (135), Expect(2) = 6e-027
Identities = 30/52 (57%), Positives = 32/52 (61%)
Frame = +2 / +3
Query: 212 FICSQTLEHAAGSPLVCRVL*ELHPGHLCAKMWNCTLDVTPQSLQRIHTIFF 367
FI S E G VC VL ELH HLCA +W T DV+PQSLQRI TI F
Sbjct: 330 FISSILEEQGGGPTRVCFVLYELHFRHLCATIWKFTSDVSPQSLQRIQTILF 485
>gb|BU885111.1|BU885111 R020G10 Populus root cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 527
Score = 201 bits (433), Expect = 4e-051
Identities = 70/113 (61%), Positives = 88/113 (77%)
Frame = -2 / +2
Query: 591 MHHNCPVCMEYLFDSMKAISVLHCGHTIHLECLYEMRAHQQFSCPVCLRSACNMSDIWQK 412
MHH+CPVC E+LF+S ++VL CGHTIH CL EMR H Q++CP+C +S C+MS +W+K
Sbjct: 86 MHHDCPVCFEFLFESRDDVTVLPCGHTIHKSCLKEMRDHYQYACPLCSKSVCDMSKVWEK 265
Query: 411 LDQQVAASPMPAIYQKKMVWILCNDCGVTSNVQFHILAHKCPGCSSYNTRQTR 253
D ++AA+PMP Y KMVWILCNDCG +S VQFH++A KC C SYNTRQTR
Sbjct: 266 FDMEIAATPMPEPYLNKMVWILCNDCGKSSEVQFHVVAQKCLNCKSYNTRQTR 424
>gb|CV232647.1|CV232647 WS0198.B21_D24 PT-DX-N-A-10 Populus trichocarpa cDNA clone
WS0198_D24 3', mRNA sequence
Length = 780
Score = 200 bits (432), Expect = 5e-051
Identities = 70/113 (61%), Positives = 88/113 (77%)
Frame = -2 / -1
Query: 591 MHHNCPVCMEYLFDSMKAISVLHCGHTIHLECLYEMRAHQQFSCPVCLRSACNMSDIWQK 412
MHH+CPVC E+LF+S ++VL CGHTIH CL EMR H Q++CP+C +S C+MS +W+K
Sbjct: 648 MHHDCPVCFEFLFESRYDVTVLPCGHTIHESCLKEMRDHYQYACPLCSKSVCDMSKVWEK 469
Query: 411 LDQQVAASPMPAIYQKKMVWILCNDCGVTSNVQFHILAHKCPGCSSYNTRQTR 253
D ++AA+PMP Y KMVWILCNDCG +S VQFH++A KC C SYNTRQTR
Sbjct: 468 FDMEIAATPMPEPYLNKMVWILCNDCGKSSEVQFHVVAQKCMNCKSYNTRQTR 310
>gb|DT470321.1|DT470321 WS01920.C21_I12 PT-DX-N-A-10 Populus trichocarpa cDNA clone
WS01920_I12 3', mRNA sequence
Length = 840
Score = 200 bits (432), Expect = 5e-051
Identities = 70/113 (61%), Positives = 88/113 (77%)
Frame = -2 / -1
Query: 591 MHHNCPVCMEYLFDSMKAISVLHCGHTIHLECLYEMRAHQQFSCPVCLRSACNMSDIWQK 412
MHH+CPVC E+LF+S ++VL CGHTIH CL EMR H Q++CP+C +S C+MS +W+K
Sbjct: 648 MHHDCPVCFEFLFESRYDVTVLPCGHTIHESCLKEMRDHYQYACPLCSKSVCDMSKVWEK 469
Query: 411 LDQQVAASPMPAIYQKKMVWILCNDCGVTSNVQFHILAHKCPGCSSYNTRQTR 253
D ++AA+PMP Y KMVWILCNDCG +S VQFH++A KC C SYNTRQTR
Sbjct: 468 FDMEIAATPMPEPYLNKMVWILCNDCGKSSEVQFHVVAQKCMNCKSYNTRQTR 310
>gb|DT518094.1|DT518094 WS02436.B21_C23 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02436_C23 3', mRNA sequence
Length = 951
Score = 200 bits (432), Expect = 5e-051
Identities = 70/113 (61%), Positives = 88/113 (77%)
Frame = -2 / -2
Query: 591 MHHNCPVCMEYLFDSMKAISVLHCGHTIHLECLYEMRAHQQFSCPVCLRSACNMSDIWQK 412
MHH+CPVC E+LF+S ++VL CGHTIH CL EMR H Q++CP+C +S C+MS +W+K
Sbjct: 890 MHHDCPVCFEFLFESRYDVTVLPCGHTIHESCLKEMRDHYQYACPLCSKSVCDMSKVWEK 711
Query: 411 LDQQVAASPMPAIYQKKMVWILCNDCGVTSNVQFHILAHKCPGCSSYNTRQTR 253
D ++AA+PMP Y KMVWILCNDCG +S VQFH++A KC C SYNTRQTR
Sbjct: 710 FDMEIAATPMPEPYLNKMVWILCNDCGKSSEVQFHVVAQKCMNCKSYNTRQTR 552
>gb|AJ771301.1|AJ771301 AJ771301 Populus euphratica leaf 3-6 months Populus euphratica cDNA
clone P0001500004F10F1, mRNA sequence
Length = 564
Score = 198 bits (427), Expect = 2e-050
Identities = 69/113 (61%), Positives = 87/113 (76%)
Frame = -2 / -3
Query: 591 MHHNCPVCMEYLFDSMKAISVLHCGHTIHLECLYEMRAHQQFSCPVCLRSACNMSDIWQK 412
MHH+CPVC E+LF+S ++VL CGHTIH CL EMR H Q++CP+C +S C+MS +W+K
Sbjct: 550 MHHDCPVCFEFLFESRYDVTVLPCGHTIHESCLKEMRDHYQYACPLCSKSVCDMSKVWEK 371
Query: 411 LDQQVAASPMPAIYQKKMVWILCNDCGVTSNVQFHILAHKCPGCSSYNTRQTR 253
D ++AA+PMP Y KMVWILCNDCG +S QFH++A KC C SYNTRQTR
Sbjct: 370 FDMEIAATPMPEPYLNKMVWILCNDCGKSSEAQFHVVAQKCLNCKSYNTRQTR 212
>gb|BP931992.1|BP931992 BP931992 full-length enriched poplar cDNA library Populus nigra
cDNA clone PnFL1-030_H22.r 3', mRNA sequence
Length = 592
Score = 194 bits (419), Expect = 3e-049
Identities = 71/104 (68%), Positives = 87/104 (83%)
Frame = -2 / -3
Query: 549 SMKAISVLHCGHTIHLECLYEMRAHQQFSCPVCLRSACNMSDIWQKLDQQVAASPMPAIY 370
+M+ I+VL CGHTIHLECL EM H ++SCPVC +S C+M+ +W+KLDQ++AA+PMP Y
Sbjct: 590 TMRDITVLPCGHTIHLECLKEMEQHYRYSCPVCSKSICDMTRLWKKLDQEIAATPMPQTY 411
Query: 369 QKKMVWILCNDCGVTSNVQFHILAHKCPGCSSYNTRQTRGDPAA 238
Q KMVWILCNDCG S+VQFHI+AHKC C+SYNTRQTRG PAA
Sbjct: 410 QNKMVWILCNDCGANSHVQFHIVAHKCLRCNSYNTRQTRGGPAA 279
Score = 119 bits (255), Expect = 1e-026
Identities = 57/103 (55%), Positives = 66/103 (64%)
Frame = +2 / +1
Query: 239 AAGSPLVCRVL*ELHPGHLCAKMWNCTLDVTPQSLQRIHTIFF**IAGIGDAATC*SSFC 418
AAG P VC VL ELH HLCA MWN T + PQSLQRIHTI F + GIG AA *SSF
Sbjct: 280 AAGPPRVCLVLYELHLKHLCATMWNWTWEFAPQSLQRIHTILFWYVWGIGVAAIS*SSFF 459
Query: 419 QMSDMLQADLRHTGHENCWCALIS*RHSRWMVCPQWSTLIAFI 547
+ DL TGHE C IS +HS+ +VCPQ +T+I+ I
Sbjct: 460 HNLVISHMDLEQTGHEYR*CCSISFKHSKCIVCPQGNTVISLI 588
>gb|AJ780615.1|AJ780615 AJ780615 Populus euphratica leaf 3-6 months Populus euphratica cDNA
clone P0000900010D02F1, mRNA sequence
Length = 675
Score = 146 bits (314), Expect(2) = 6e-046
Identities = 51/82 (62%), Positives = 64/82 (78%)
Frame = -2 / -3
Query: 498 CLYEMRAHQQFSCPVCLRSACNMSDIWQKLDQQVAASPMPAIYQKKMVWILCNDCGVTSN 319
CL EMR H Q++CP+C +S C+MS +W+K D ++AA+PMP Y KMVWILCNDCG +S
Sbjct: 457 CLKEMRDHYQYACPLCSKSVCDMSKVWEKFDMEIAATPMPEPYLNKMVWILCNDCGKSSE 278
Query: 318 VQFHILAHKCPGCSSYNTRQTR 253
VQFH++A KC C SYNTRQTR
Sbjct: 277 VQFHVVAQKCLNCKSYNTRQTR 212
Score = 57.4 bits (119), Expect(2) = 6e-046
Identities = 20/33 (60%), Positives = 25/33 (75%)
Frame = -2 / -2
Query: 591 MHHNCPVCMEYLFDSMKAISVLHCGHTIHLECL 493
MHH+CPVC E+L +S ++VL CGHTIH E L
Sbjct: 551 MHHDCPVCXEFLXESRYDVTVLPCGHTIHXELL 453
>gb|AJ771403.1|AJ771403 AJ771403 Populus euphratica leaf 3-6 months Populus euphratica cDNA
clone P0001500006E11F1, mRNA sequence
Length = 623
Score = 166 bits (356), Expect = 1e-040
Identities = 60/105 (57%), Positives = 79/105 (75%)
Frame = -2 / -2
Query: 567 MEYLFDSMKAISVLHCGHTIHLECLYEMRAHQQFSCPVCLRSACNMSDIWQKLDQQVAAS 388
+++LF+S ++V CGHTIH CL EMR H Q++CP+C +S C+MS + +K D ++AA+
Sbjct: 526 LQFLFESRYDVTV*PCGHTIHESCLKEMRDHYQYACPLCSKSVCDMSKV*EKFDMEIAAT 347
Query: 387 PMPAIYQKKMVWILCNDCGVTSNVQFHILAHKCPGCSSYNTRQTR 253
PMP Y KMVWILCNDCG +S VQFH++A KC C SYNTRQTR
Sbjct: 346 PMPEPYLNKMVWILCNDCGKSSEVQFHVVAQKCLNCKSYNTRQTR 212
>gb|DT505695.1|DT505695 WS01811.C21_J20 PTxD-IL-N-A-9 Populus trichocarpa x Populus
deltoides cDNA clone WS01811_J20 3', mRNA sequence
Length = 800
Score = 104 bits (222), Expect(2) = 2e-035
Identities = 35/75 (46%), Positives = 52/75 (69%)
Frame = -2 / -1
Query: 591 MHHNCPVCMEYLFDSMKAISVLHCGHTIHLECLYEMRAHQQFSCPVCLRSACNMSDIWQK 412
M + CPVC EYLFDS+K +V+ CGHT+H++C EM QQ+ CP+C ++ + S+ W+
Sbjct: 608 MKNYCPVCYEYLFDSVKQATVMKCGHTMHMDCFREMAKQQQYRCPICSKTVMDTSEYWKM 429
Query: 411 LDQQVAASPMPAIYQ 367
LD+++ A MP YQ
Sbjct: 428 LDEEIEAVQMPEQYQ 384
Score = 64.3 bits (134), Expect(2) = 2e-035
Identities = 23/36 (63%), Positives = 27/36 (75%)
Frame = -2 / -1
Query: 357 VWILCNDCGVTSNVQFHILAHKCPGCSSYNTRQTRG 250
V ILCNDC TSNV FH++ HKC C+SYNTR+ G
Sbjct: 377 VTILCNDCNNTSNVAFHVIGHKCRQCASYNTRRISG 270
>gb|BU813923.1|BU813923 N022F11 Populus bark cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 572
Score = 98.2 bits (208), Expect(2) = 2e-034
Identities = 34/60 (56%), Positives = 45/60 (75%)
Frame = -2 / +2
Query: 534 SVLHCGHTIHLECLYEMRAHQQFSCPVCLRSACNMSDIWQKLDQQVAASPMPAIYQKKMV 355
+VL CGHTIH CL EMR H Q++CP+C +S C+MS +W+K D ++AA+PMP Y KMV
Sbjct: 2 TVLPCGHTIHKSCLKEMRDHYQYACPLCSKSVCDMSKVWEKFDMEIAATPMPEPYLNKMV 181
Score = 67.0 bits (140), Expect(2) = 2e-034
Identities = 24/33 (72%), Positives = 27/33 (81%)
Frame = -2 / +1
Query: 351 ILCNDCGVTSNVQFHILAHKCPGCSSYNTRQTR 253
ILCNDCG +S VQFH++A KC C SYNTRQTR
Sbjct: 184 ILCNDCGKSSEVQFHVVAQKCLNCKSYNTRQTR 282
>gb|DN487113.1|DN487113 Q009I10.3pR Populus dormant bud cDNA library Populus tremula cDNA
clone Q009I10 3', mRNA sequence
Length = 770
Score = 100 bits (214), Expect(2) = 2e-033
Identities = 34/75 (45%), Positives = 50/75 (66%)
Frame = -2 / -2
Query: 591 MHHNCPVCMEYLFDSMKAISVLHCGHTIHLECLYEMRAHQQFSCPVCLRSACNMSDIWQK 412
M + CPVC EYLFDS+K V+ CGHT+H++C EM QQ+ CP+C ++ + S+ W+
Sbjct: 613 MKNYCPVCYEYLFDSVKQAMVMKCGHTMHMDCFREMAKQQQYRCPICSKTVMDTSEYWKM 434
Query: 411 LDQQVAASPMPAIYQ 367
LD+++ MP YQ
Sbjct: 433 LDEEIEDVQMPEQYQ 389
Score = 61.1 bits (127), Expect(2) = 2e-033
Identities = 22/36 (61%), Positives = 26/36 (72%)
Frame = -2 / -2
Query: 357 VWILCNDCGVTSNVQFHILAHKCPGCSSYNTRQTRG 250
V ILCNDC TS V FH++ HKC C+SYNTR+ G
Sbjct: 382 VSILCNDCDSTSKVAFHVVGHKCKQCASYNTRRIAG 275
>gb|BU816161.1|BU816161 N061D02 Populus bark cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 616
Score = 140 bits (301), Expect = 6e-033
Identities = 49/100 (49%), Positives = 69/100 (69%)
Frame = -2 / +1
Query: 561 YLFDSMKAISVLHCGHTIHLECLYEMRAHQQFSCPVCLRSACNMSDIWQKLDQQVAASPM 382
YLFDS+K +V+ CGHT+H EC EM ++ CP+C +S +MS W+++D+++ A+ M
Sbjct: 13 YLFDSLKETTVMKCGHTMHGECYDEMIKRDKYCCPICSKSIIDMSKTWKRIDEEIEATVM 192
Query: 381 PAIYQKKMVWILCNDCGVTSNVQFHILAHKCPGCSSYNTR 262
P Y+ + VWILCNDC T+ V FHI+ KC C SYNTR
Sbjct: 193 PEDYRHRKVWILCNDCNDTTEVYFHIIGQKCSHCKSYNTR 312
>gb|DN486016.1|DN486016 N061D02.3pR Populus bark cDNA library Populus tremula x Populus
tremuloides cDNA clone N061D02 3', mRNA sequence
Length = 548
Score = 140 bits (301), Expect = 6e-033
Identities = 49/100 (49%), Positives = 69/100 (69%)
Frame = -2 / -3
Query: 561 YLFDSMKAISVLHCGHTIHLECLYEMRAHQQFSCPVCLRSACNMSDIWQKLDQQVAASPM 382
YLFDS+K +V+ CGHT+H EC EM ++ CP+C +S +MS W+++D+++ A+ M
Sbjct: 546 YLFDSLKETTVMKCGHTMHGECYDEMIKRDKYCCPICSKSIIDMSKTWKRIDEEIEATVM 367
Query: 381 PAIYQKKMVWILCNDCGVTSNVQFHILAHKCPGCSSYNTR 262
P Y+ + VWILCNDC T+ V FHI+ KC C SYNTR
Sbjct: 366 PEDYRHRKVWILCNDCNDTTEVYFHIIGQKCSHCKSYNTR 247
>gb|DN495565.1|DN495565 N061D02.5pR Populus bark cDNA library Populus tremula x Populus
tremuloides cDNA clone N061D02 5', mRNA sequence
Length = 603
Score = 140 bits (301), Expect = 6e-033
Identities = 49/100 (49%), Positives = 69/100 (69%)
Frame = -2 / +2
Query: 561 YLFDSMKAISVLHCGHTIHLECLYEMRAHQQFSCPVCLRSACNMSDIWQKLDQQVAASPM 382
YLFDS+K +V+ CGHT+H EC EM ++ CP+C +S +MS W+++D+++ A+ M
Sbjct: 2 YLFDSLKETTVMKCGHTMHGECYDEMIKRDKYCCPICSKSIIDMSKTWKRIDEEIEATVM 181
Query: 381 PAIYQKKMVWILCNDCGVTSNVQFHILAHKCPGCSSYNTR 262
P Y+ + VWILCNDC T+ V FHI+ KC C SYNTR
Sbjct: 182 PEDYRHRKVWILCNDCNDTTEVYFHIIGQKCSHCKSYNTR 301
>gb|DN496718.1|DN496718 Q009I10.5pR Populus dormant bud cDNA library Populus tremula cDNA
clone Q009I10 5', mRNA sequence
Length = 794
Score = 100 bits (214), Expect(2) = 8e-033
Identities = 34/75 (45%), Positives = 50/75 (66%)
Frame = -2 / +3
Query: 591 MHHNCPVCMEYLFDSMKAISVLHCGHTIHLECLYEMRAHQQFSCPVCLRSACNMSDIWQK 412
M + CPVC EYLFDS+K V+ CGHT+H++C EM QQ+ CP+C ++ + S+ W+
Sbjct: 270 MKNYCPVCYEYLFDSVKQAMVMKCGHTMHMDCFREMAKQQQYRCPICSKTVMDTSEYWKM 449
Query: 411 LDQQVAASPMPAIYQ 367
LD+++ MP YQ
Sbjct: 450 LDEEIEDVQMPEQYQ 494
Score = 59.3 bits (123), Expect(2) = 8e-033
Identities = 21/33 (63%), Positives = 25/33 (75%)
Frame = -2 / +3
Query: 357 VWILCNDCGVTSNVQFHILAHKCPGCSSYNTRQ 259
V ILCNDC TS V FH++ HKC C+SYNTR+
Sbjct: 501 VSILCNDCDSTSKVAFHVVGHKCKQCASYNTRR 599
>gb|CV256668.1|CV256668 WS0244.B21_H19 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS0244_H19 3', mRNA sequence
Length = 498
Score = 108 bits (231), Expect(2) = 8e-033
Identities = 40/56 (71%), Positives = 46/56 (82%)
Frame = -2 / -3
Query: 417 QKLDQQVAASPMPAIYQKKMVWILCNDCGVTSNVQFHILAHKCPGCSSYNTRQTRG 250
+KLD ++AA+PMP YQ KMVWILCNDCG TS VQFH++A KC C SYNTRQTRG
Sbjct: 373 EKLDVEIAATPMPEPYQNKMVWILCNDCGKTSEVQFHVVAQKCLNCKSYNTRQTRG 206
Score = 51.5 bits (106), Expect(2) = 8e-033
Identities = 17/38 (44%), Positives = 25/38 (65%)
Frame = -2 / -1
Query: 531 VLHCGHTIHLECLYEMRAHQQFSCPVCLRSACNMSDIW 418
VL IH CL EM H Q++CP+C +S C++S++W
Sbjct: 489 VLTAAVVIHKSCLKEMWDHYQYACPLCSKSVCDVSEVW 376
>gb|DT506791.1|DT506791 WS02416.BR_I11 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02416_I11 5', mRNA sequence
Length = 679
Score = 108 bits (231), Expect(2) = 1e-032
Identities = 40/56 (71%), Positives = 46/56 (82%)
Frame = -2 / +1
Query: 417 QKLDQQVAASPMPAIYQKKMVWILCNDCGVTSNVQFHILAHKCPGCSSYNTRQTRG 250
+KLD ++AA+PMP YQ KMVWILCNDCG TS VQFH++A KC C SYNTRQTRG
Sbjct: 307 EKLDVEIAATPMPEPYQNKMVWILCNDCGKTSEVQFHVVAQKCLNCKSYNTRQTRG 474
Score = 50.6 bits (104), Expect(2) = 1e-032
Identities = 16/38 (42%), Positives = 25/38 (65%)
Frame = -2 / +2
Query: 531 VLHCGHTIHLECLYEMRAHQQFSCPVCLRSACNMSDIW 418
V+ IH CL EM H Q++CP+C +S C++S++W
Sbjct: 191 VIKISVVIHKSCLKEMWDHYQYACPLCSKSVCDVSEVW 304
>gb|DT511460.1|DT511460 WS02416.B21_I11 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02416_I11 3', mRNA sequence
Length = 679
Score = 108 bits (231), Expect(2) = 1e-032
Identities = 40/56 (71%), Positives = 46/56 (82%)
Frame = -2 / -1
Query: 417 QKLDQQVAASPMPAIYQKKMVWILCNDCGVTSNVQFHILAHKCPGCSSYNTRQTRG 250
+KLD ++AA+PMP YQ KMVWILCNDCG TS VQFH++A KC C SYNTRQTRG
Sbjct: 373 EKLDVEIAATPMPEPYQNKMVWILCNDCGKTSEVQFHVVAQKCLNCKSYNTRQTRG 206
Score = 50.6 bits (104), Expect(2) = 1e-032
Identities = 16/38 (42%), Positives = 25/38 (65%)
Frame = -2 / -2
Query: 531 VLHCGHTIHLECLYEMRAHQQFSCPVCLRSACNMSDIW 418
V+ IH CL EM H Q++CP+C +S C++S++W
Sbjct: 489 VIKISVVIHKSCLKEMWDHYQYACPLCSKSVCDVSEVW 376
>gb|CV254547.1|CV254547 WS0241.B21_I11 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS0241_I11 3', mRNA sequence
Length = 650
Score = 108 bits (231), Expect(2) = 1e-032
Identities = 40/56 (71%), Positives = 46/56 (82%)
Frame = -2 / -2
Query: 417 QKLDQQVAASPMPAIYQKKMVWILCNDCGVTSNVQFHILAHKCPGCSSYNTRQTRG 250
+KLD ++AA+PMP YQ KMVWILCNDCG TS VQFH++A KC C SYNTRQTRG
Sbjct: 373 EKLDVEIAATPMPEPYQNKMVWILCNDCGKTSEVQFHVVAQKCLNCKSYNTRQTRG 206
Score = 50.6 bits (104), Expect(2) = 1e-032
Identities = 16/38 (42%), Positives = 25/38 (65%)
Frame = -2 / -3
Query: 531 VLHCGHTIHLECLYEMRAHQQFSCPVCLRSACNMSDIW 418
V+ IH CL EM H Q++CP+C +S C++S++W
Sbjct: 489 VIKISVVIHKSCLKEMWDHYQYACPLCSKSVCDVSEVW 376
>gb|DT516082.1|DT516082 WS02430.B21_F16 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02430_F16 3', mRNA sequence
Length = 536
Score = 108 bits (231), Expect(2) = 1e-032
Identities = 40/56 (71%), Positives = 46/56 (82%)
Frame = -2 / -2
Query: 417 QKLDQQVAASPMPAIYQKKMVWILCNDCGVTSNVQFHILAHKCPGCSSYNTRQTRG 250
+KLD ++AA+PMP YQ KMVWILCNDCG TS VQFH++A KC C SYNTRQTRG
Sbjct: 373 EKLDVEIAATPMPEPYQNKMVWILCNDCGKTSEVQFHVVAQKCLNCKSYNTRQTRG 206
Score = 50.6 bits (104), Expect(2) = 1e-032
Identities = 16/38 (42%), Positives = 25/38 (65%)
Frame = -2 / -3
Query: 531 VLHCGHTIHLECLYEMRAHQQFSCPVCLRSACNMSDIW 418
V+ IH CL EM H Q++CP+C +S C++S++W
Sbjct: 489 VIKISVVIHKSCLKEMWDHYQYACPLCSKSVCDVSEVW 376
>gb|DT519288.1|DT519288 WS02440.B21_P20 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02440_P20 3', mRNA sequence
Length = 536
Score = 108 bits (231), Expect(2) = 1e-032
Identities = 40/56 (71%), Positives = 46/56 (82%)
Frame = -2 / -2
Query: 417 QKLDQQVAASPMPAIYQKKMVWILCNDCGVTSNVQFHILAHKCPGCSSYNTRQTRG 250
+KLD ++AA+PMP YQ KMVWILCNDCG TS VQFH++A KC C SYNTRQTRG
Sbjct: 373 EKLDVEIAATPMPEPYQNKMVWILCNDCGKTSEVQFHVVAQKCLNCKSYNTRQTRG 206
Score = 50.6 bits (104), Expect(2) = 1e-032
Identities = 16/38 (42%), Positives = 25/38 (65%)
Frame = -2 / -3
Query: 531 VLHCGHTIHLECLYEMRAHQQFSCPVCLRSACNMSDIW 418
V+ IH CL EM H Q++CP+C +S C++S++W
Sbjct: 489 VIKISVVIHKSCLKEMWDHYQYACPLCSKSVCDVSEVW 376
>gb|DT519202.1|DT519202 WS02440.B21_K09 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02440_K09 3', mRNA sequence
Length = 633
Score = 105 bits (225), Expect(2) = 1e-031
Identities = 39/56 (69%), Positives = 45/56 (80%)
Frame = -2 / -3
Query: 417 QKLDQQVAASPMPAIYQKKMVWILCNDCGVTSNVQFHILAHKCPGCSSYNTRQTRG 250
+KLD ++A +PMP YQ KMVWILCNDCG TS VQFH++A KC C SYNTRQTRG
Sbjct: 373 EKLDVEIADTPMPEPYQNKMVWILCNDCGKTSEVQFHVVAQKCLNCKSYNTRQTRG 206
Score = 50.1 bits (103), Expect(2) = 1e-031
Identities = 15/31 (48%), Positives = 23/31 (74%)
Frame = -2 / -1
Query: 510 IHLECLYEMRAHQQFSCPVCLRSACNMSDIW 418
IH CL EM H Q++CP+C +S C++S++W
Sbjct: 468 IHKSCLKEMWDHYQYACPLCSKSVCDVSEVW 376
>gb|DT520892.1|DT520892 WS02448.B21_N10 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02448_N10 3', mRNA sequence
Length = 652
Score = 105 bits (223), Expect(2) = 1e-030
Identities = 39/56 (69%), Positives = 45/56 (80%)
Frame = -2 / -3
Query: 417 QKLDQQVAASPMPAIYQKKMVWILCNDCGVTSNVQFHILAHKCPGCSSYNTRQTRG 250
+KLD ++AA+PMP YQ KMVWILCNDCG TS VQFH++A KC C SYNT QTRG
Sbjct: 395 EKLDVEIAATPMPEPYQNKMVWILCNDCGKTSEVQFHVVAQKCLNCKSYNTCQTRG 228
Score = 47.8 bits (98), Expect(2) = 1e-030
Identities = 15/38 (39%), Positives = 24/38 (63%)
Frame = -2 / -1
Query: 531 VLHCGHTIHLECLYEMRAHQQFSCPVCLRSACNMSDIW 418
V+ IH CL EM H Q++CP+C +S C++ ++W
Sbjct: 511 VIKISVVIHKSCLKEMWDHYQYACPLCSKSVCDVFEVW 398
>gb|CX174046.1|CX174046 D07_69-64_07.ab1 leaf inoculated with Marssonia pathogen of Populus
deltoides Populus deltoides cDNA, mRNA sequence
Length = 575
Score = 124 bits (266), Expect = 4e-028
Identities = 42/65 (64%), Positives = 55/65 (84%)
Frame = -2 / +1
Query: 591 MHHNCPVCMEYLFDSMKAISVLHCGHTIHLECLYEMRAHQQFSCPVCLRSACNMSDIWQK 412
MHHNCPVC E+LFD+M+ I+VL CGHTIHLECL EM H ++SCPVC +S C+M+ +W+K
Sbjct: 379 MHHNCPVCFEFLFDTMRDITVLPCGHTIHLECLKEMEQHYRYSCPVCSKSICDMTRLWKK 558
Query: 411 LDQQV 397
LDQ++
Sbjct: 559 LDQEI 573
>gb|DN498398.1|DN498398 S023D04.5pR Populus imbibed seed cDNA library Populus tremula cDNA
clone S023D04 5', mRNA sequence
Length = 787
Score = 113 bits (242), Expect = 8e-025
Identities = 38/83 (45%), Positives = 58/83 (69%)
Frame = -2 / +2
Query: 591 MHHNCPVCMEYLFDSMKAISVLHCGHTIHLECLYEMRAHQQFSCPVCLRSACNMSDIWQK 412
M H+CP+C EYLFDS+K +V+ CGHT+H EC EM ++ CP+C +S +MS+ W++
Sbjct: 536 MRHHCPICYEYLFDSLKETTVMKCGHTMHGECYDEMIKRDKYCCPICSKSIIDMSNTWKR 715
Query: 411 LDQQVAASPMPAIYQKKMVWILC 343
+D+++ A+ MP + VWILC
Sbjct: 716 IDEEIEATVMPEDTGHREVWILC 784
>gb|CV268198.1|CV268198 WS0204.B21_N04 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS0204_N04 3', mRNA sequence
Length = 803
Score = 106 bits (227), Expect = 9e-023
Identities = 37/57 (64%), Positives = 45/57 (78%)
Frame = -2 / -3
Query: 423 IWQKLDQQVAASPMPAIYQKKMVWILCNDCGVTSNVQFHILAHKCPGCSSYNTRQTR 253
+W+K D ++AA+PMP Y KMVWILCNDCG +S VQFH++A KC C SYNTRQTR
Sbjct: 801 VWEKFDMEIAATPMPEPYLNKMVWILCNDCGKSSEVQFHVVAQKCMNCKSYNTRQTR 631
>gb|BU815036.1|BU815036 N036D06 Populus bark cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 234
Score = 88.1 bits (186), Expect(2) = 2e-021
Identities = 30/62 (48%), Positives = 45/62 (72%)
Frame = -2 / +3
Query: 555 FDSMKAISVLHCGHTIHLECLYEMRAHQQFSCPVCLRSACNMSDIWQKLDQQVAASPMPA 376
F+S ++VL CGHTIH CL EMR H Q++CP+C +S +MS++W K + ++A++PMP
Sbjct: 42 FESRDDVTVLPCGHTIHKSCLNEMRDHYQYACPLCSKSLRDMSNVWDKFNMEIASTPMPE 221
Query: 375 IY 370
Y
Sbjct: 222 PY 227
Score = 32.2 bits (64), Expect(2) = 2e-021
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = -2 / +2
Query: 591 MHHNCPVCMEYLF 553
MHH+CPVC E LF
Sbjct: 5 MHHDCPVCFESLF 43
>gb|DT486940.1|DT486940 WS02532.B21_F16 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02532_F16 3', mRNA sequence
Length = 835
Score = 77.1 bits (162), Expect(2) = 3e-021
Identities = 30/74 (40%), Positives = 44/74 (59%)
Frame = -2 / -1
Query: 468 FSCPVCLRSACNMSDIWQKLDQQVAASPMPAIYQKKMVWILCNDCGVTSNVQFHILAHKC 289
++CP+C +S +M+ + LD +AA +P Y+ + ILCNDC + QFH L HKC
Sbjct: 412 YTCPICCKSLGDMAVYFGMLDALLAAEELPEEYRDRCQDILCNDCDQKGSAQFHWLYHKC 233
Query: 288 PGCSSYNTRQTRGD 247
C SYNTR + +
Sbjct: 232 GLCGSYNTRVIKNE 191
Score = 44.1 bits (90), Expect(2) = 3e-021
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = -2 / -1
Query: 582 NCPVCMEYLFDSMKAISVLHCGHTIHLEC 496
NCP+C ++LF S + L CGH +H C
Sbjct: 523 NCPICCDFLFTSSATVRALPCGHYMHSSC 437
Database: Populus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:49 PM
Number of letters in database: 203,408,664
Number of sequences in database: 369,679
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 367,534,089
Number of Sequences: 369679
Number of extensions: 5710386
Number of successful extensions: 71719
Number of sequences better than 1.0e-020: 40
length of database: 67,802,888
effective HSP length: 51
effective length of database: 48,949,259
effective search space used: 7097642555
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)