TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3671909.2.1
(767 letters)
Database: Populus_nucl_with_EST.fasta
369,679 sequences; 203,408,664 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BP935767.1|BP935767 BP935767 full-length enriched poplar... 116 2e-033
gb|BP936911.1|BP936911 BP936911 full-length enriched poplar... 110 4e-032
gb|CV282598.1|CV282598 WS0185.B21_B06 PTxD-IL-N-A-9 Populus... 98 1e-029
gb|CV242366.1|CV242366 WS02514.B21.1_N21 PT-MB-N-A-15 Popul... 96 1e-029
gb|DT518861.1|DT518861 WS02439.B21_I08 PTxD-ICC-N-A-14 Popu... 100 4e-029
gb|DN487910.1|DN487910 R014G04.3pR Populus root cDNA librar... 104 4e-029
gb|CV254184.1|CV254184 WS0224.B21_F02 PTxD-ICC-A-12 Populus... 100 4e-029
gb|DN485002.1|DN485002 K067P64.3pR Populus apical shoot cDN... 104 4e-029
gb|CV270575.1|CV270575 WS0152.B21_F18 PTxN-IB-A-6 Populus t... 102 1e-028
gb|BU816690.1|BU816690 N070C04 Populus bark cDNA library Po... 92 2e-027
gb|CK093908.1|CK093908 I003P94.3pR Populus senescing leaves... 92 2e-027
gb|BI126518.1|BI126518 I076P66P Populus leaf cDNA library P... 88 1e-026
gb|BU811435.1|BU811435 UL84TC10 Populus leaf cDNA library P... 88 2e-026
gb|CV260160.1|CV260160 WS02013.B21_F05 PTxN-IB-N-A-11 Popul... 89 3e-026
gb|CV271771.1|CV271771 WS0155.B21_K06 PTxN-IB-A-6 Populus t... 89 3e-026
gb|DT506382.1|DT506382 WS0189.C21_G24 PTxD-IL-N-A-9 Populus... 106 5e-026
gb|CA934681.1|CA934681 MTU5TS.P22.C05 Aspen stem cDNA Libra... 80 5e-026
gb|BU884975.1|BU884975 R018G10 Populus root cDNA library Po... 84 1e-025
gb|DT526525.1|DT526525 WS02048.C21_E10 PTxN-IB-N-A-11 Popul... 86 2e-025
gb|BU831012.1|BU831012 T016A09 Populus apical shoot cDNA li... 80 2e-025
gb|DT515056.1|DT515056 WS02426.B21_I09 PTxD-ICC-N-A-14 Popu... 92 2e-025
gb|CV229915.1|CV229915 WS01914.B21_N16 PT-DX-N-A-10 Populus... 87 2e-025
gb|CV244951.1|CV244951 WS0256.B21_B04 PT-MB-N-A-15 Populus ... 79 5e-025
gb|DT488476.1|DT488476 WS02536.B21_I17 PT-MB-N-A-15 Populus... 79 5e-025
gb|CV233891.1|CV233891 WS01212.B21_M19 PT-GT-FL-A-3 Populus... 79 5e-025
gb|DT492506.1|DT492506 WS02550.C21_O19 PT-MB-N-A-15 Populus... 79 5e-025
gb|DT493065.1|DT493065 WS02553.C21_E13 PT-MB-N-A-15 Populus... 79 5e-025
gb|CV268269.1|CV268269 WS0205.B21_A08 PTxN-IB-N-A-11 Populu... 79 5e-025
gb|BI139378.1|BI139378 F130P55Y Populus flower cDNA library... 79 5e-025
gb|DT488614.1|DT488614 WS02536.B21_O19 PT-MB-N-A-15 Populus... 83 6e-025
gb|DT525060.1|DT525060 WS02044.C21_F08 PTxN-IB-N-A-11 Popul... 83 6e-025
gb|CV268803.1|CV268803 WS0206.B21_H22 PTxN-IB-N-A-11 Populu... 83 6e-025
gb|CV267124.1|CV267124 WS02030.B21_O08 PTxN-IB-N-A-11 Popul... 79 9e-025
gb|BI122224.1|BI122224 I003P94P Populus leaf cDNA library P... 94 9e-025
gb|DT524814.1|DT524814 WS02043.C21_K17 PTxN-IB-N-A-11 Popul... 83 1e-024
gb|CV239153.1|CV239153 WS0231.B21_H17 PT-MB-A-13 Populus tr... 87 1e-024
gb|BI128178.1|BI128178 G072P17Y Populus cambium cDNA librar... 87 1e-024
gb|CV242376.1|CV242376 WS02514.B21.1_O07 PT-MB-N-A-15 Popul... 78 2e-024
gb|CV240794.1|CV240794 WS02510.B21_F17 PT-MB-N-A-15 Populus... 78 2e-024
gb|CV276808.1|CV276808 WS0141.B21_N12 PTxD-IL-A-5 Populus t... 90 3e-024
gb|CV255138.1|CV255138 WS02412.B21_C21 PTxD-ICC-N-A-14 Popu... 81 3e-024
gb|DT515953.1|DT515953 WS02429.B21.1_P20 PTxD-ICC-N-A-14 Po... 84 4e-024
gb|DT511261.1|DT511261 WS02429.BR_P20 PTxD-ICC-N-A-14 Popul... 84 4e-024
gb|AY129242.1| Populus x canescens putative cytochrome P450... 78 6e-024
gb|CV259182.1|CV259182 WS02010.B21_J23 PTxN-IB-N-A-11 Popul... 82 6e-024
gb|DT521110.1|DT521110 WS02033.B21_G19 PTxN-IB-N-A-11 Popul... 82 6e-024
gb|DT505131.1|DT505131 WS01810.C21_B18 PTxD-IL-N-A-9 Populu... 78 8e-024
gb|CN520625.1|CN520625 GQ0108.B3_J01 GQ010 Populus trichoca... 78 8e-024
gb|CV277475.1|CV277475 WS0143.B21_L02 PTxD-IL-A-5 Populus t... 78 8e-024
gb|CK090846.1|CK090846 F027P83.3pR Populus flower cDNA libr... 78 8e-024
gb|CN523217.1|CN523217 GQ015M01.B3_D21 GQ015 Populus tricho... 78 8e-024
gb|CV268839.1|CV268839 WS0206.B21_J12 PTxN-IB-N-A-11 Populu... 78 8e-024
gb|CN521870.1|CN521870 GQ0123.B3_I06 GQ012 Populus trichoca... 78 8e-024
gb|CA933625.1|CA933625 MTU3TS.P10.A10 Aspen stem cDNA Libra... 74 1e-023
gb|DT505510.1|DT505510 WS01811.C21_B21 PTxD-IL-N-A-9 Populu... 78 1e-023
gb|CV263273.1|CV263273 WS02020.B21_N09 PTxN-IB-N-A-11 Popul... 90 2e-023
gb|DT525402.1|DT525402 WS02045.C21_E02 PTxN-IB-N-A-11 Popul... 90 2e-023
gb|DT525953.1|DT525953 WS02046.C21_L17 PTxN-IB-N-A-11 Popul... 90 2e-023
gb|CV271259.1|CV271259 WS0154.B21_D12 PTxN-IB-A-6 Populus t... 85 2e-023
gb|CV266327.1|CV266327 WS02029.B21_L15 PTxN-IB-N-A-11 Popul... 90 2e-023
gb|CV269352.1|CV269352 WS0208.B21_A13 PTxN-IB-N-A-11 Populu... 90 2e-023
gb|CV269102.1|CV269102 WS0207.B21_F10 PTxN-IB-N-A-11 Populu... 90 2e-023
gb|DT489647.1|DT489647 WS02542.B21_M21 PT-MB-N-A-15 Populus... 68 3e-023
gb|DT487545.1|DT487545 WS02533.B21_P20 PT-MB-N-A-15 Populus... 68 3e-023
gb|DT486468.1|DT486468 WS02531.B21_B04 PT-MB-N-A-15 Populus... 68 3e-023
gb|DT490082.1|DT490082 WS02543.B21_P19 PT-MB-N-A-15 Populus... 68 3e-023
gb|DN491286.1|DN491286 UM82TF02.3pR Populus female catkins ... 83 4e-023
gb|BU871553.1|BU871553 Q031H01 Populus flower cDNA library ... 83 4e-023
gb|CF119045.1|CF119045 MTU10CS.P12.G07 Aspen stem cDNA Libr... 77 7e-023
gb|CA934643.1|CA934643 MTU5TS.P21.G01 Aspen stem cDNA Libra... 79 7e-023
gb|BU836036.1|BU836036 T081H09 Populus apical shoot cDNA li... 78 9e-023
gb|BU829072.1|BU829072 K034P27P Populus apical shoot cDNA l... 66 9e-023
gb|DN485353.1|DN485353 M128D07.3pR Populus female catkins c... 79 1e-022
gb|CN523259.1|CN523259 GQ015M01.B3_K03 GQ015 Populus tricho... 78 1e-022
gb|CV736203.1|CV736203 F01D11 two-month-old leaves from clo... 66 1e-022
gb|DT520984.1|DT520984 WS02033.B21_B10 PTxN-IB-N-A-11 Popul... 78 2e-022
gb|CK090858.1|CK090858 F028P35.3pR Populus flower cDNA libr... 79 2e-022
gb|CV281573.1|CV281573 WS0182.B21_E16 PTxD-IL-N-A-9 Populus... 98 2e-022
gb|DN484569.1|DN484569 I059P44.3pR Populus senescing leaves... 82 2e-022
gb|CV243454.1|CV243454 WS02518.B21_O20 PT-MB-N-A-15 Populus... 65 2e-022
gb|CK091136.1|CK091136 F050P78.3pR Populus flower cDNA libr... 79 2e-022
gb|CK091031.1|CK091031 F039P96.3pR Populus flower cDNA libr... 78 3e-022
gb|CV283623.1|CV283623 WS0187.B21_N10 PTxD-IL-N-A-9 Populus... 105 5e-022
gb|CA824973.1|CA824973 R51C03 two-month-old roots from clon... 74 8e-022
gb|CV265232.1|CV265232 WS02026.B21_L02 PTxN-IB-N-A-11 Popul... 104 9e-022
gb|CF119044.1|CF119044 MTU10CS.P12.G06 Aspen stem cDNA Libr... 75 1e-021
gb|CV232998.1|CV232998 WS0199.B21_F05 PT-DX-N-A-10 Populus ... 75 1e-021
gb|BU878221.1|BU878221 V044E07 Populus flower cDNA library ... 75 1e-021
gb|DN497208.1|DN497208 Q040F03.5pR Populus dormant bud cDNA... 78 1e-021
gb|CK115921.1|CK115921 Y017C06 Populus infected leaf substr... 84 1e-021
gb|CK088835.1|CK088835 A075P09.3pR Hybrid aspen plasmid lib... 75 2e-021
gb|AJ775135.1|AJ775135 AJ775135 Populus euphratica shoot 3-... 79 2e-021
gb|DT515287.1|DT515287 WS02427.B21_C14 PTxD-ICC-N-A-14 Popu... 102 2e-021
gb|CV243043.1|CV243043 WS02516.B21.1_L21 PT-MB-N-A-15 Popul... 74 3e-021
gb|BP931069.1|BP931069 BP931069 full-length enriched poplar... 71 3e-021
gb|DT470394.1|DT470394 WS01920.C21_L22 PT-DX-N-A-10 Populus... 78 3e-021
gb|CA930893.1|CA930893 MTU2TA.P11.F11 Aspen apex cDNA Libra... 75 3e-021
>gb|BP935767.1|BP935767 BP935767 full-length enriched poplar cDNA library Populus nigra
cDNA clone PnFL1-080_N08.r 3', mRNA sequence
Length = 527
Score = 116 bits (248), Expect(2) = 2e-033
Identities = 42/69 (60%), Positives = 55/69 (79%)
Frame = -1 / -3
Query: 590 SAVEFKGADFELLPFGAGRRMCPGMAFGLANVELALASLLFHFDWEAPGVSDPAEFDMAE 411
S++++KG +FE PFGAGRRMCPG+ FG++NV+L LA+LL+HFDW+ PG P DM+E
Sbjct: 396 SSIDYKGVNFEFTPFGAGRRMCPGILFGISNVDLLLANLLYHFDWKLPGDMKPESLDMSE 217
Query: 410 AFGITARRK 384
AFG T RRK
Sbjct: 216 AFGATVRRK 190
Score = 46.4 bits (95), Expect(2) = 2e-033
Identities = 15/24 (62%), Positives = 19/24 (79%)
Frame = -1 / -3
Query: 710 GYDVPAGTTVLVNVWALGRDGRYW 639
GY++P + VLVNVWA+GRD YW
Sbjct: 507 GYNIPIKSRVLVNVWAIGRDSNYW 436
>gb|BP936911.1|BP936911 BP936911 full-length enriched poplar cDNA library Populus nigra
cDNA clone PnFL1-098_D09.r 3', mRNA sequence
Length = 655
Score = 110 bits (234), Expect(2) = 4e-032
Identities = 43/71 (60%), Positives = 52/71 (73%)
Frame = -1 / -2
Query: 590 SAVEFKGADFELLPFGAGRRMCPGMAFGLANVELALASLLFHFDWEAPGVSDPAEFDMAE 411
S+V++KGA+FEL+PFGAGRRMCPGM FG+A VE LA LL+HFDW+ + P DM E
Sbjct: 444 SSVDYKGANFELVPFGAGRRMCPGMLFGMATVEFTLAQLLYHFDWKLADGATPEALDMQE 265
Query: 410 AFGITARRKAD 378
F T RRK D
Sbjct: 264 IFASTMRRKHD 232
Score = 48.3 bits (99), Expect(2) = 4e-032
Identities = 17/36 (47%), Positives = 24/36 (66%)
Frame = -1 / -2
Query: 746 LPRQSQEPRRVLGYDVPAGTTVLVNVWALGRDGRYW 639
+PR + +V GY + A T V+VN WA+GRD +YW
Sbjct: 591 IPRACSKTCQVNGYTIEAKTKVMVNAWAIGRDPKYW 484
>gb|CV282598.1|CV282598 WS0185.B21_B06 PTxD-IL-N-A-9 Populus trichocarpa x Populus
deltoides cDNA clone WS0185_B06 3', mRNA sequence
Length = 888
Score = 98.2 bits (208), Expect(2) = 1e-029
Identities = 38/68 (55%), Positives = 48/68 (70%)
Frame = -1 / -1
Query: 590 SAVEFKGADFELLPFGAGRRMCPGMAFGLANVELALASLLFHFDWEAPGVSDPAEFDMAE 411
S ++FKG DFEL+PFGAGRR CP + FG+A VE+ALA LL FDW+ P + + D E
Sbjct: 351 SGIDFKGQDFELIPFGAGRRSCPAITFGVATVEIALAQLLHSFDWKLPPGLEAKDIDNTE 172
Query: 410 AFGITARR 387
AFGI+ R
Sbjct: 171 AFGISMHR 148
Score = 51.9 bits (107), Expect(2) = 1e-029
Identities = 19/41 (46%), Positives = 28/41 (68%)
Frame = -1 / -1
Query: 761 ASTLLLPRQSQEPRRVLGYDVPAGTTVLVNVWALGRDGRYW 639
A+ +L+PR+S E + GY++PA T + VNVW +GRD W
Sbjct: 513 AAPVLVPRESLEDVVIDGYNIPAKTRIYVNVWGMGRDPELW 391
>gb|CV242366.1|CV242366 WS02514.B21.1_N21 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02514_N21 3', mRNA sequence
Length = 656
Score = 96.4 bits (204), Expect(2) = 1e-029
Identities = 36/68 (52%), Positives = 47/68 (69%)
Frame = -1 / -1
Query: 590 SAVEFKGADFELLPFGAGRRMCPGMAFGLANVELALASLLFHFDWEAPGVSDPAEFDMAE 411
S ++FKG DFEL+PFGAGRR CP + FG+A VE+AL LL FDW+ P + + D E
Sbjct: 380 SGIDFKGQDFELIPFGAGRRSCPAITFGIATVEIALVQLLHSFDWKLPPGLEAKDIDNTE 201
Query: 410 AFGITARR 387
AFG++ R
Sbjct: 200 AFGVSLHR 177
Score = 53.3 bits (110), Expect(2) = 1e-029
Identities = 20/41 (48%), Positives = 28/41 (68%)
Frame = -1 / -1
Query: 761 ASTLLLPRQSQEPRRVLGYDVPAGTTVLVNVWALGRDGRYW 639
A+ +LLPR+S E + GY++PA T + VNVW +GRD W
Sbjct: 542 AAPVLLPRESLEDVIIDGYNIPAKTRIYVNVWGMGRDPELW 420
>gb|DT518861.1|DT518861 WS02439.B21_I08 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02439_I08 3', mRNA sequence
Length = 890
Score = 99.6 bits (211), Expect(2) = 4e-029
Identities = 38/68 (55%), Positives = 49/68 (72%)
Frame = -1 / -2
Query: 590 SAVEFKGADFELLPFGAGRRMCPGMAFGLANVELALASLLFHFDWEAPGVSDPAEFDMAE 411
S ++FKG DFEL+PFGAGRR+CP + FG+A VE+ALA LL FDW+ P + + D E
Sbjct: 352 SGIDFKGQDFELIPFGAGRRICPAITFGIATVEIALAQLLHSFDWKLPPGLEAKDIDNTE 173
Query: 410 AFGITARR 387
AFGI+ R
Sbjct: 172 AFGISMHR 149
Score = 48.7 bits (100), Expect(2) = 4e-029
Identities = 17/41 (41%), Positives = 27/41 (65%)
Frame = -1 / -2
Query: 761 ASTLLLPRQSQEPRRVLGYDVPAGTTVLVNVWALGRDGRYW 639
A+ +L+PR++ E + GY++PA T + VN W +GRD W
Sbjct: 514 AAPVLVPREALEDVIIDGYNIPAKTRIYVNAWGMGRDPELW 392
>gb|DN487910.1|DN487910 R014G04.3pR Populus root cDNA library Populus tremula x Populus
tremuloides cDNA clone R014G04 3', mRNA sequence
Length = 793
Score = 104 bits (221), Expect(2) = 4e-029
Identities = 39/69 (56%), Positives = 51/69 (73%)
Frame = -1 / -3
Query: 590 SAVEFKGADFELLPFGAGRRMCPGMAFGLANVELALASLLFHFDWEAPGVSDPAEFDMAE 411
S++++KG +FE +PFGAG+RMCPG+ FG+A VEL LA LL+HFDW+ P + DM E
Sbjct: 314 SSIDYKGTNFEFIPFGAGKRMCPGILFGIATVELPLAQLLYHFDWKLPNGDLLEDLDMNE 135
Query: 410 AFGITARRK 384
FG T RRK
Sbjct: 134 VFGGTVRRK 108
Score = 44.1 bits (90), Expect(2) = 4e-029
Identities = 14/37 (37%), Positives = 24/37 (64%)
Frame = -1 / -3
Query: 749 LLPRQSQEPRRVLGYDVPAGTTVLVNVWALGRDGRYW 639
L+PR+ + + GY + A + V++N WA+GRD +W
Sbjct: 464 LIPRECNKTCEINGYVIQAQSKVMINAWAIGRDSDHW 354
>gb|CV254184.1|CV254184 WS0224.B21_F02 PTxD-ICC-A-12 Populus trichocarpa x Populus
deltoides cDNA clone WS0224_F02 3', mRNA sequence
Length = 692
Score = 99.6 bits (211), Expect(2) = 4e-029
Identities = 38/68 (55%), Positives = 49/68 (72%)
Frame = -1 / -3
Query: 590 SAVEFKGADFELLPFGAGRRMCPGMAFGLANVELALASLLFHFDWEAPGVSDPAEFDMAE 411
S ++FKG DFEL+PFGAGRR+CP + FG+A VE+ALA LL FDW+ P + + D E
Sbjct: 444 SGIDFKGQDFELIPFGAGRRICPAITFGIATVEIALAQLLHSFDWKLPPGLEAKDIDNTE 265
Query: 410 AFGITARR 387
AFGI+ R
Sbjct: 264 AFGISMHR 241
Score = 48.7 bits (100), Expect(2) = 4e-029
Identities = 17/41 (41%), Positives = 27/41 (65%)
Frame = -1 / -3
Query: 761 ASTLLLPRQSQEPRRVLGYDVPAGTTVLVNVWALGRDGRYW 639
A+ +L+PR++ E + GY++PA T + VN W +GRD W
Sbjct: 606 AAPVLVPREALEDVIIDGYNIPAKTRIYVNAWGMGRDPELW 484
>gb|DN485002.1|DN485002 K067P64.3pR Populus apical shoot cDNA library Populus tremula x
Populus tremuloides cDNA clone K067P64 3', mRNA sequence
Length = 598
Score = 104 bits (221), Expect(2) = 4e-029
Identities = 39/69 (56%), Positives = 51/69 (73%)
Frame = -1 / -1
Query: 590 SAVEFKGADFELLPFGAGRRMCPGMAFGLANVELALASLLFHFDWEAPGVSDPAEFDMAE 411
S++++KG +FE +PFGAG+RMCPG+ FG+A VEL LA LL+HFDW+ P + DM E
Sbjct: 427 SSIDYKGTNFEFIPFGAGKRMCPGILFGIATVELPLAQLLYHFDWKLPNGDLLEDLDMNE 248
Query: 410 AFGITARRK 384
FG T RRK
Sbjct: 247 VFGGTVRRK 221
Score = 44.1 bits (90), Expect(2) = 4e-029
Identities = 14/37 (37%), Positives = 24/37 (64%)
Frame = -1 / -1
Query: 749 LLPRQSQEPRRVLGYDVPAGTTVLVNVWALGRDGRYW 639
L+PR+ + + GY + A + V++N WA+GRD +W
Sbjct: 577 LIPRECNKTCEINGYVIQAQSKVMINAWAIGRDSDHW 467
>gb|CV270575.1|CV270575 WS0152.B21_F18 PTxN-IB-A-6 Populus trichocarpa x Populus nigra cDNA
clone WS0152_F18 3', mRNA sequence
Length = 806
Score = 102 bits (218), Expect(2) = 1e-028
Identities = 38/69 (55%), Positives = 51/69 (73%)
Frame = -1 / -1
Query: 590 SAVEFKGADFELLPFGAGRRMCPGMAFGLANVELALASLLFHFDWEAPGVSDPAEFDMAE 411
S++++KG +F+ +PFGAG+RMCPG+ FG+A VEL LA LL+HFDW+ P + DM E
Sbjct: 647 SSIDYKGTNFDFIPFGAGKRMCPGILFGIATVELPLAQLLYHFDWKLPNGDLLEDLDMNE 468
Query: 410 AFGITARRK 384
FG T RRK
Sbjct: 467 VFGGTVRRK 441
Score = 44.1 bits (90), Expect(2) = 1e-028
Identities = 14/36 (38%), Positives = 24/36 (66%)
Frame = -1 / -1
Query: 746 LPRQSQEPRRVLGYDVPAGTTVLVNVWALGRDGRYW 639
+PR+ + + GY + A + V++NVWA+GRD +W
Sbjct: 794 IPRECNKTCEINGYVIQAKSRVMINVWAIGRDSDHW 687
>gb|BU816690.1|BU816690 N070C04 Populus bark cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 679
Score = 92.3 bits (195), Expect(2) = 2e-027
Identities = 35/69 (50%), Positives = 48/69 (69%)
Frame = -1 / +2
Query: 590 SAVEFKGADFELLPFGAGRRMCPGMAFGLANVELALASLLFHFDWEAPGVSDPAEFDMAE 411
SA++FKG DF+ +PFGAGRR CPG F + +E+ LASLL F+W PG + P + D+ E
Sbjct: 263 SAIDFKGNDFQFIPFGAGRRGCPGTTFASSLIEITLASLLHKFNWALPGGAKPEDLDITE 442
Query: 410 AFGITARRK 384
A G++ RK
Sbjct: 443 APGLSIHRK 469
Score = 50.6 bits (104), Expect(2) = 2e-027
Identities = 18/38 (47%), Positives = 26/38 (68%)
Frame = -1 / +2
Query: 752 LLLPRQSQEPRRVLGYDVPAGTTVLVNVWALGRDGRYW 639
LL+PR+S + + GYD+ A T V++N WA+GRD W
Sbjct: 110 LLVPRESTKDVKAQGYDIRAKTRVIINAWAIGRDPSSW 223
>gb|CK093908.1|CK093908 I003P94.3pR Populus senescing leaves cDNA library Populus tremula
cDNA clone I003P94 3', mRNA sequence
Length = 634
Score = 92.3 bits (195), Expect(2) = 2e-027
Identities = 35/69 (50%), Positives = 48/69 (69%)
Frame = -1 / -1
Query: 590 SAVEFKGADFELLPFGAGRRMCPGMAFGLANVELALASLLFHFDWEAPGVSDPAEFDMAE 411
SA++FKG DF+ +PFGAGRR CPG F + +E+ LASLL F+W PG + P + D+ E
Sbjct: 466 SAIDFKGNDFQFIPFGAGRRGCPGTTFASSLIEITLASLLHKFNWALPGGAKPEDLDITE 287
Query: 410 AFGITARRK 384
A G++ RK
Sbjct: 286 APGLSIHRK 260
Score = 50.6 bits (104), Expect(2) = 2e-027
Identities = 18/38 (47%), Positives = 26/38 (68%)
Frame = -1 / -1
Query: 752 LLLPRQSQEPRRVLGYDVPAGTTVLVNVWALGRDGRYW 639
LL+PR+S + + GYD+ A T V++N WA+GRD W
Sbjct: 619 LLVPRESTKDVKAQGYDIRAKTRVIINAWAIGRDPSSW 506
>gb|BI126518.1|BI126518 I076P66P Populus leaf cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 523
Score = 88.1 bits (186), Expect(2) = 1e-026
Identities = 32/58 (55%), Positives = 45/58 (77%)
Frame = -1 / +2
Query: 590 SAVEFKGADFELLPFGAGRRMCPGMAFGLANVELALASLLFHFDWEAPGVSDPAEFDM 417
S+++ KG DFEL+PFGAGRR+CPG+ G+A VEL+L++LL+ FDWE PG + D+
Sbjct: 221 SSIDLKGNDFELIPFGAGRRICPGIFMGIATVELSLSNLLYKFDWEMPGGMKREDIDI 394
Score = 51.5 bits (106), Expect(2) = 1e-026
Identities = 19/40 (47%), Positives = 26/40 (65%)
Frame = -1 / +2
Query: 758 STLLLPRQSQEPRRVLGYDVPAGTTVLVNVWALGRDGRYW 639
+ LLLPR++ + GY++PA T V VN WA+GRD W
Sbjct: 62 AALLLPRETTTECNIGGYEIPAKTLVYVNAWAIGRDTEAW 181
>gb|BU811435.1|BU811435 UL84TC10 Populus leaf cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 545
Score = 88.1 bits (186), Expect(2) = 2e-026
Identities = 32/58 (55%), Positives = 45/58 (77%)
Frame = -1 / +2
Query: 590 SAVEFKGADFELLPFGAGRRMCPGMAFGLANVELALASLLFHFDWEAPGVSDPAEFDM 417
S+++ KG DFEL+PFGAGRR+CPG+ G+A VEL+L++LL+ FDWE PG + D+
Sbjct: 239 SSIDLKGNDFELIPFGAGRRICPGIFMGIATVELSLSNLLYKFDWEMPGGMKREDIDI 412
Score = 51.0 bits (105), Expect(2) = 2e-026
Identities = 19/38 (50%), Positives = 25/38 (65%)
Frame = -1 / +2
Query: 752 LLLPRQSQEPRRVLGYDVPAGTTVLVNVWALGRDGRYW 639
LLLPR++ + GY++PA T V VN WA+GRD W
Sbjct: 86 LLLPRETTTECNIGGYEIPAKTLVYVNAWAIGRDTEAW 199
>gb|CV260160.1|CV260160 WS02013.B21_F05 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02013_F05 3', mRNA sequence
Length = 703
Score = 88.6 bits (187), Expect(2) = 3e-026
Identities = 32/58 (55%), Positives = 45/58 (77%)
Frame = -1 / -3
Query: 590 SAVEFKGADFELLPFGAGRRMCPGMAFGLANVELALASLLFHFDWEAPGVSDPAEFDM 417
S+++ KG DFEL+PFGAGRR+CPG+ G+A VEL+L++LL+ FDWE PG + D+
Sbjct: 446 SSIDLKGQDFELIPFGAGRRICPGIYMGIATVELSLSNLLYKFDWEMPGGMKREDIDV 273
Score = 50.1 bits (103), Expect(2) = 3e-026
Identities = 19/38 (50%), Positives = 25/38 (65%)
Frame = -1 / -3
Query: 752 LLLPRQSQEPRRVLGYDVPAGTTVLVNVWALGRDGRYW 639
LL+PR++ V GY++PA T V VN WA+GRD W
Sbjct: 599 LLVPRETTTECTVGGYEIPAKTLVYVNAWAIGRDTEVW 486
>gb|CV271771.1|CV271771 WS0155.B21_K06 PTxN-IB-A-6 Populus trichocarpa x Populus nigra cDNA
clone WS0155_K06 3', mRNA sequence
Length = 703
Score = 88.6 bits (187), Expect(2) = 3e-026
Identities = 32/58 (55%), Positives = 45/58 (77%)
Frame = -1 / -3
Query: 590 SAVEFKGADFELLPFGAGRRMCPGMAFGLANVELALASLLFHFDWEAPGVSDPAEFDM 417
S+++ KG DFEL+PFGAGRR+CPG+ G+A VEL+L++LL+ FDWE PG + D+
Sbjct: 446 SSIDLKGQDFELIPFGAGRRICPGIYMGIATVELSLSNLLYKFDWEMPGGMKREDIDV 273
Score = 50.1 bits (103), Expect(2) = 3e-026
Identities = 19/38 (50%), Positives = 25/38 (65%)
Frame = -1 / -3
Query: 752 LLLPRQSQEPRRVLGYDVPAGTTVLVNVWALGRDGRYW 639
LL+PR++ V GY++PA T V VN WA+GRD W
Sbjct: 599 LLVPRETTTECTVGGYEIPAKTLVYVNAWAIGRDTEVW 486
>gb|DT506382.1|DT506382 WS0189.C21_G24 PTxD-IL-N-A-9 Populus trichocarpa x Populus
deltoides cDNA clone WS0189_G24 3', mRNA sequence
Length = 965
Score = 106 bits (227), Expect(2) = 5e-026
Identities = 41/71 (57%), Positives = 52/71 (73%)
Frame = -1 / -3
Query: 590 SAVEFKGADFELLPFGAGRRMCPGMAFGLANVELALASLLFHFDWEAPGVSDPAEFDMAE 411
S+V++KGA+FE +PFG+GRR+CPGM FGL NVE+ALA LL+HFDW+ P P DM E
Sbjct: 456 SSVDYKGANFEFIPFGSGRRICPGMNFGLDNVEVALAQLLYHFDWKLPNGVTPEALDMEE 277
Query: 410 AFGITARRKAD 378
+ RRK D
Sbjct: 276 HYSSPTRRKHD 244
Score = 30.9 bits (61), Expect(2) = 5e-026
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = -1 / -3
Query: 683 VLVNVWALGRDGRYW 639
V+V+ WA+GRD YW
Sbjct: 540 VMVSAWAIGRDPNYW 496
>gb|CA934681.1|CA934681 MTU5TS.P22.C05 Aspen stem cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 599
Score = 79.9 bits (168), Expect(2) = 5e-026
Identities = 31/68 (45%), Positives = 46/68 (67%)
Frame = -1 / -2
Query: 587 AVEFKGADFELLPFGAGRRMCPGMAFGLANVELALASLLFHFDWEAPGVSDPAEFDMAEA 408
A++ KG +FELLPFGAGRRMC G + GL ++ ++A+LL F W+ PG E +M E
Sbjct: 355 AIDVKGHNFELLPFGAGRRMCVGYSLGLKVIQASVANLLHGFKWKLPGDMTTEELNMQEI 176
Query: 407 FGITARRK 384
FG++ ++
Sbjct: 175 FGLSTPKQ 152
Score = 57.9 bits (120), Expect(2) = 5e-026
Identities = 21/40 (52%), Positives = 28/40 (70%)
Frame = -1 / -2
Query: 758 STLLLPRQSQEPRRVLGYDVPAGTTVLVNVWALGRDGRYW 639
S L+PR ++E R+ GYD+P GT V+VNVW +GRD W
Sbjct: 517 SPFLVPRLAREDIRLGGYDIPKGTRVMVNVWTIGRDASIW 398
>gb|BU884975.1|BU884975 R018G10 Populus root cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 656
Score = 84.5 bits (178), Expect(2) = 1e-025
Identities = 34/68 (50%), Positives = 47/68 (69%)
Frame = -1 / -2
Query: 584 VEFKGADFELLPFGAGRRMCPGMAFGLANVELALASLLFHFDWEAPGVSDPAEFDMAEAF 405
V+ KG DFEL+PFGAGRR+C GM+ GL V+L A+L+ FDW+ P + +M EA+
Sbjct: 235 VDVKGNDFELIPFGAGRRICAGMSLGLRMVQLLTATLIHAFDWDLADGLVPEKLNMDEAY 56
Query: 404 GITARRKA 381
G+T +R A
Sbjct: 55 GLTLQRAA 32
Score = 52.4 bits (108), Expect(2) = 1e-025
Identities = 20/41 (48%), Positives = 27/41 (65%)
Frame = -1 / -2
Query: 761 ASTLLLPRQSQEPRRVLGYDVPAGTTVLVNVWALGRDGRYW 639
++ L LPR + E + GY +P G+TVLVNVWA+ RD W
Sbjct: 415 STPLSLPRMAAESCEIGGYHIPKGSTVLVNVWAIARDPDVW 293
>gb|DT526525.1|DT526525 WS02048.C21_E10 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02048_E10 3', mRNA sequence
Length = 810
Score = 85.8 bits (181), Expect(2) = 2e-025
Identities = 34/65 (52%), Positives = 43/65 (66%)
Frame = -1 / -2
Query: 581 EFKGADFELLPFGAGRRMCPGMAFGLANVELALASLLFHFDWEAPGVSDPAEFDMAEAFG 402
+ KG DFEL+PFGAGRR+CPG+ G V LALASL+ FDW+ P + D +E FG
Sbjct: 422 DVKGRDFELIPFGAGRRICPGLPLGHKMVHLALASLIHSFDWKIADDLTPEDIDTSETFG 243
Query: 401 ITARR 387
IT +
Sbjct: 242 ITLHK 228
Score = 50.1 bits (103), Expect(2) = 2e-025
Identities = 17/39 (43%), Positives = 25/39 (64%)
Frame = -1 / -2
Query: 752 LLLPRQSQEPRRVLGYDVPAGTTVLVNVWALGRDGRYWP 636
LLLPR++ + G+ VP +L+N+WA+GRD WP
Sbjct: 584 LLLPRKAVSEVEMQGFTVPKNAQILINIWAIGRDPTIWP 468
>gb|BU831012.1|BU831012 T016A09 Populus apical shoot cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 694
Score = 79.9 bits (168), Expect(2) = 2e-025
Identities = 31/68 (45%), Positives = 46/68 (67%)
Frame = -1 / +2
Query: 587 AVEFKGADFELLPFGAGRRMCPGMAFGLANVELALASLLFHFDWEAPGVSDPAEFDMAEA 408
A++ KG +FELLPFGAGRRMC G + GL ++ ++A+LL F W+ PG E +M E
Sbjct: 401 AIDVKGHNFELLPFGAGRRMCVGYSLGLKVIQASVANLLHGFKWKLPGDMTTEELNMQEI 580
Query: 407 FGITARRK 384
FG++ ++
Sbjct: 581 FGLSTPKQ 604
Score = 56.1 bits (116), Expect(2) = 2e-025
Identities = 20/40 (50%), Positives = 28/40 (70%)
Frame = -1 / +2
Query: 758 STLLLPRQSQEPRRVLGYDVPAGTTVLVNVWALGRDGRYW 639
S L+PR ++E ++ GYD+P GT V+VNVW +GRD W
Sbjct: 239 SPFLVPRLAREDIQLGGYDIPKGTRVMVNVWTIGRDASIW 358
>gb|DT515056.1|DT515056 WS02426.B21_I09 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02426_I09 3', mRNA sequence
Length = 768
Score = 91.8 bits (194), Expect(2) = 2e-025
Identities = 37/68 (54%), Positives = 48/68 (70%)
Frame = -1 / -1
Query: 590 SAVEFKGADFELLPFGAGRRMCPGMAFGLANVELALASLLFHFDWEAPGVSDPAEFDMAE 411
S ++FKG DFEL+PFGAGRR+CP + FG+A VE+ALA LL FDW+ P + + E
Sbjct: 489 SGIDFKGQDFELIPFGAGRRICPAIPFGIAPVEIALAQLLPSFDWKLPPGLEAKDIANPE 310
Query: 410 AFGITARR 387
AFGI+ R
Sbjct: 309 AFGISMPR 286
Score = 43.7 bits (89), Expect(2) = 2e-025
Identities = 16/41 (39%), Positives = 25/41 (60%)
Frame = -1 / -1
Query: 761 ASTLLLPRQSQEPRRVLGYDVPAGTTVLVNVWALGRDGRYW 639
A+ +L+PR++ E + G +PA T + VN W +GRD W
Sbjct: 651 AAPVLVPREALEDVIIDGSTIPAKTRIYVNAWGMGRDPELW 529
>gb|CV229915.1|CV229915 WS01914.B21_N16 PT-DX-N-A-10 Populus trichocarpa cDNA clone
WS01914_N16 3', mRNA sequence
Length = 690
Score = 87.2 bits (184), Expect(2) = 2e-025
Identities = 31/69 (44%), Positives = 47/69 (68%)
Frame = -1 / -2
Query: 590 SAVEFKGADFELLPFGAGRRMCPGMAFGLANVELALASLLFHFDWEAPGVSDPAEFDMAE 411
S ++FKG DFE +PFG+GRR+CPG+ +V L +A L+ FDW P +P + DM+E
Sbjct: 317 SNLDFKGNDFEFIPFGSGRRICPGLPMAAKHVALIIAYLILFFDWSLPCGKNPTDLDMSE 138
Query: 410 AFGITARRK 384
+G+T R++
Sbjct: 137 NYGLTLRKE 111
Score = 48.3 bits (99), Expect(2) = 2e-025
Identities = 17/37 (45%), Positives = 25/37 (67%)
Frame = -1 / -2
Query: 749 LLPRQSQEPRRVLGYDVPAGTTVLVNVWALGRDGRYW 639
LLP ++ + +V+ Y +P T VLVN WA+GRD + W
Sbjct: 467 LLPHRAIDSCQVMNYSIPKNTQVLVNYWAIGRDPKSW 357
>gb|CV244951.1|CV244951 WS0256.B21_B04 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS0256_B04 3', mRNA sequence
Length = 946
Score = 78.5 bits (165), Expect(2) = 5e-025
Identities = 30/68 (44%), Positives = 46/68 (67%)
Frame = -1 / -2
Query: 587 AVEFKGADFELLPFGAGRRMCPGMAFGLANVELALASLLFHFDWEAPGVSDPAEFDMAEA 408
+++ KG +FELLPFGAGRRMC G + GL ++ ++A+LL F W+ PG E +M E
Sbjct: 642 SIDVKGHNFELLPFGAGRRMCVGYSLGLKVIQASVANLLHGFKWKLPGDMKTEELNMQEI 463
Query: 407 FGITARRK 384
FG++ ++
Sbjct: 462 FGLSTPKQ 439
Score = 56.1 bits (116), Expect(2) = 5e-025
Identities = 20/40 (50%), Positives = 28/40 (70%)
Frame = -1 / -2
Query: 758 STLLLPRQSQEPRRVLGYDVPAGTTVLVNVWALGRDGRYW 639
S L+PR ++E ++ GYD+P GT V+VNVW +GRD W
Sbjct: 804 SPFLVPRLAREDIQLGGYDIPKGTRVMVNVWTIGRDASIW 685
>gb|DT488476.1|DT488476 WS02536.B21_I17 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02536_I17 3', mRNA sequence
Length = 903
Score = 78.5 bits (165), Expect(2) = 5e-025
Identities = 30/68 (44%), Positives = 46/68 (67%)
Frame = -1 / -2
Query: 587 AVEFKGADFELLPFGAGRRMCPGMAFGLANVELALASLLFHFDWEAPGVSDPAEFDMAEA 408
+++ KG +FELLPFGAGRRMC G + GL ++ ++A+LL F W+ PG E +M E
Sbjct: 629 SIDVKGHNFELLPFGAGRRMCVGYSLGLKVIQASVANLLHGFKWKLPGDMKTEELNMQEI 450
Query: 407 FGITARRK 384
FG++ ++
Sbjct: 449 FGLSTPKQ 426
Score = 56.1 bits (116), Expect(2) = 5e-025
Identities = 20/40 (50%), Positives = 28/40 (70%)
Frame = -1 / -2
Query: 758 STLLLPRQSQEPRRVLGYDVPAGTTVLVNVWALGRDGRYW 639
S L+PR ++E ++ GYD+P GT V+VNVW +GRD W
Sbjct: 791 SPFLVPRLAREDIQLGGYDIPKGTRVMVNVWTIGRDASIW 672
>gb|CV233891.1|CV233891 WS01212.B21_M19 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01212_M19 3', mRNA sequence
Length = 837
Score = 78.5 bits (165), Expect(2) = 5e-025
Identities = 30/68 (44%), Positives = 46/68 (67%)
Frame = -1 / -3
Query: 587 AVEFKGADFELLPFGAGRRMCPGMAFGLANVELALASLLFHFDWEAPGVSDPAEFDMAEA 408
+++ KG +FELLPFGAGRRMC G + GL ++ ++A+LL F W+ PG E +M E
Sbjct: 631 SIDVKGHNFELLPFGAGRRMCVGYSLGLKVIQASVANLLHGFKWKLPGDMKTEELNMQEI 452
Query: 407 FGITARRK 384
FG++ ++
Sbjct: 451 FGLSTPKQ 428
Score = 56.1 bits (116), Expect(2) = 5e-025
Identities = 20/40 (50%), Positives = 28/40 (70%)
Frame = -1 / -3
Query: 758 STLLLPRQSQEPRRVLGYDVPAGTTVLVNVWALGRDGRYW 639
S L+PR ++E ++ GYD+P GT V+VNVW +GRD W
Sbjct: 793 SPFLVPRLAREDIQLGGYDIPKGTRVMVNVWTIGRDASIW 674
>gb|DT492506.1|DT492506 WS02550.C21_O19 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02550_O19 3', mRNA sequence
Length = 820
Score = 78.5 bits (165), Expect(2) = 5e-025
Identities = 30/68 (44%), Positives = 46/68 (67%)
Frame = -1 / -1
Query: 587 AVEFKGADFELLPFGAGRRMCPGMAFGLANVELALASLLFHFDWEAPGVSDPAEFDMAEA 408
+++ KG +FELLPFGAGRRMC G + GL ++ ++A+LL F W+ PG E +M E
Sbjct: 649 SIDVKGHNFELLPFGAGRRMCVGYSLGLKVIQASVANLLHGFKWKLPGDMKTEELNMQEI 470
Query: 407 FGITARRK 384
FG++ ++
Sbjct: 469 FGLSTPKQ 446
Score = 56.1 bits (116), Expect(2) = 5e-025
Identities = 20/40 (50%), Positives = 28/40 (70%)
Frame = -1 / -1
Query: 758 STLLLPRQSQEPRRVLGYDVPAGTTVLVNVWALGRDGRYW 639
S L+PR ++E ++ GYD+P GT V+VNVW +GRD W
Sbjct: 811 SPFLVPRLAREDIQLGGYDIPKGTRVMVNVWTIGRDASIW 692
>gb|DT493065.1|DT493065 WS02553.C21_E13 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02553_E13 3', mRNA sequence
Length = 817
Score = 78.5 bits (165), Expect(2) = 5e-025
Identities = 30/68 (44%), Positives = 46/68 (67%)
Frame = -1 / -1
Query: 587 AVEFKGADFELLPFGAGRRMCPGMAFGLANVELALASLLFHFDWEAPGVSDPAEFDMAEA 408
+++ KG +FELLPFGAGRRMC G + GL ++ ++A+LL F W+ PG E +M E
Sbjct: 622 SIDVKGHNFELLPFGAGRRMCVGYSLGLKVIQASVANLLHGFKWKLPGDMKTEELNMQEI 443
Query: 407 FGITARRK 384
FG++ ++
Sbjct: 442 FGLSTPKQ 419
Score = 56.1 bits (116), Expect(2) = 5e-025
Identities = 20/40 (50%), Positives = 28/40 (70%)
Frame = -1 / -1
Query: 758 STLLLPRQSQEPRRVLGYDVPAGTTVLVNVWALGRDGRYW 639
S L+PR ++E ++ GYD+P GT V+VNVW +GRD W
Sbjct: 784 SPFLVPRLAREDIQLGGYDIPKGTRVMVNVWTIGRDASIW 665
>gb|CV268269.1|CV268269 WS0205.B21_A08 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS0205_A08 3', mRNA sequence
Length = 761
Score = 78.5 bits (165), Expect(2) = 5e-025
Identities = 30/68 (44%), Positives = 46/68 (67%)
Frame = -1 / -2
Query: 587 AVEFKGADFELLPFGAGRRMCPGMAFGLANVELALASLLFHFDWEAPGVSDPAEFDMAEA 408
+++ KG +FELLPFGAGRRMC G + GL ++ ++A+LL F W+ PG E +M E
Sbjct: 481 SIDVKGHNFELLPFGAGRRMCVGYSLGLKVIQASVANLLHGFKWKLPGDMKTEELNMQEI 302
Query: 407 FGITARRK 384
FG++ ++
Sbjct: 301 FGLSTPKQ 278
Score = 56.1 bits (116), Expect(2) = 5e-025
Identities = 20/40 (50%), Positives = 28/40 (70%)
Frame = -1 / -2
Query: 758 STLLLPRQSQEPRRVLGYDVPAGTTVLVNVWALGRDGRYW 639
S L+PR ++E ++ GYD+P GT V+VNVW +GRD W
Sbjct: 643 SPFLVPRLAREDIQLGGYDIPKGTRVMVNVWTIGRDASIW 524
>gb|BI139378.1|BI139378 F130P55Y Populus flower cDNA library Populus trichocarpa cDNA, mRNA
sequence
Length = 488
Score = 78.5 bits (165), Expect(2) = 5e-025
Identities = 30/68 (44%), Positives = 46/68 (67%)
Frame = -1 / +1
Query: 587 AVEFKGADFELLPFGAGRRMCPGMAFGLANVELALASLLFHFDWEAPGVSDPAEFDMAEA 408
+++ KG +FELLPFGAGRRMC G + GL ++ ++A+LL F W+ PG E +M E
Sbjct: 196 SIDVKGHNFELLPFGAGRRMCVGYSLGLKVIQASVANLLHGFKWKLPGDMKTEELNMQEI 375
Query: 407 FGITARRK 384
FG++ ++
Sbjct: 376 FGLSTPKQ 399
Score = 56.1 bits (116), Expect(2) = 5e-025
Identities = 20/40 (50%), Positives = 28/40 (70%)
Frame = -1 / +1
Query: 758 STLLLPRQSQEPRRVLGYDVPAGTTVLVNVWALGRDGRYW 639
S L+PR ++E ++ GYD+P GT V+VNVW +GRD W
Sbjct: 34 SPFLVPRLAREDIQLGGYDIPKGTRVMVNVWTIGRDASIW 153
>gb|DT488614.1|DT488614 WS02536.B21_O19 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02536_O19 3', mRNA sequence
Length = 874
Score = 83.1 bits (175), Expect(2) = 6e-025
Identities = 33/66 (50%), Positives = 46/66 (69%)
Frame = -1 / -1
Query: 584 VEFKGADFELLPFGAGRRMCPGMAFGLANVELALASLLFHFDWEAPGVSDPAEFDMAEAF 405
V+ KG DFEL+PFGAGRR+C GM+ GL V+L A+L+ FDW+ P + +M EA+
Sbjct: 280 VDVKGNDFELIPFGAGRRICAGMSLGLRMVQLLTATLIHAFDWDLADGLVPEKLNMDEAY 101
Query: 404 GITARR 387
G+T +R
Sbjct: 100 GLTLQR 83
Score = 51.0 bits (105), Expect(2) = 6e-025
Identities = 20/41 (48%), Positives = 27/41 (65%)
Frame = -1 / -1
Query: 761 ASTLLLPRQSQEPRRVLGYDVPAGTTVLVNVWALGRDGRYW 639
++ L LPR + E + GY +P G+TVLVNVWA+ RD W
Sbjct: 460 STPLSLPRIAAESCEIGGYHIPKGSTVLVNVWAIARDPDVW 338
>gb|DT525060.1|DT525060 WS02044.C21_F08 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02044_F08 3', mRNA sequence
Length = 800
Score = 83.1 bits (175), Expect(2) = 6e-025
Identities = 33/66 (50%), Positives = 46/66 (69%)
Frame = -1 / -1
Query: 584 VEFKGADFELLPFGAGRRMCPGMAFGLANVELALASLLFHFDWEAPGVSDPAEFDMAEAF 405
V+ KG DFEL+PFGAGRR+C GM+ GL V+L A+L+ FDW+ P + +M EA+
Sbjct: 449 VDVKGNDFELIPFGAGRRICAGMSLGLRMVQLLTATLIHAFDWDLADGLVPEKLNMDEAY 270
Query: 404 GITARR 387
G+T +R
Sbjct: 269 GLTLQR 252
Score = 51.0 bits (105), Expect(2) = 6e-025
Identities = 20/41 (48%), Positives = 27/41 (65%)
Frame = -1 / -1
Query: 761 ASTLLLPRQSQEPRRVLGYDVPAGTTVLVNVWALGRDGRYW 639
++ L LPR + E + GY +P G+TVLVNVWA+ RD W
Sbjct: 629 STPLSLPRIAAESCEIGGYHIPKGSTVLVNVWAIARDPDVW 507
>gb|CV268803.1|CV268803 WS0206.B21_H22 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS0206_H22 3', mRNA sequence
Length = 762
Score = 83.1 bits (175), Expect(2) = 6e-025
Identities = 33/66 (50%), Positives = 46/66 (69%)
Frame = -1 / -1
Query: 584 VEFKGADFELLPFGAGRRMCPGMAFGLANVELALASLLFHFDWEAPGVSDPAEFDMAEAF 405
V+ KG DFEL+PFGAGRR+C GM+ GL V+L A+L+ FDW+ P + +M EA+
Sbjct: 450 VDVKGNDFELIPFGAGRRICAGMSLGLRMVQLLTATLIHAFDWDLADGLVPEKLNMDEAY 271
Query: 404 GITARR 387
G+T +R
Sbjct: 270 GLTLQR 253
Score = 51.0 bits (105), Expect(2) = 6e-025
Identities = 20/41 (48%), Positives = 27/41 (65%)
Frame = -1 / -1
Query: 761 ASTLLLPRQSQEPRRVLGYDVPAGTTVLVNVWALGRDGRYW 639
++ L LPR + E + GY +P G+TVLVNVWA+ RD W
Sbjct: 630 STPLSLPRIAAESCEIGGYHIPKGSTVLVNVWAIARDPDVW 508
>gb|CV267124.1|CV267124 WS02030.B21_O08 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02030_O08 3', mRNA sequence
Length = 791
Score = 78.5 bits (165), Expect(2) = 9e-025
Identities = 30/68 (44%), Positives = 46/68 (67%)
Frame = -1 / +3
Query: 587 AVEFKGADFELLPFGAGRRMCPGMAFGLANVELALASLLFHFDWEAPGVSDPAEFDMAEA 408
+++ KG +FELLPFGAGRRMC G + GL ++ ++A+LL F W+ PG E +M E
Sbjct: 162 SIDVKGHNFELLPFGAGRRMCVGYSLGLKVIQASVANLLHGFKWKLPGDMKTEELNMQEI 341
Query: 407 FGITARRK 384
FG++ ++
Sbjct: 342 FGLSTPKQ 365
Score = 55.1 bits (114), Expect(2) = 9e-025
Identities = 19/39 (48%), Positives = 28/39 (71%)
Frame = -1 / +3
Query: 755 TLLLPRQSQEPRRVLGYDVPAGTTVLVNVWALGRDGRYW 639
+ L+PR ++E ++ GYD+P GT V+VNVW +GRD W
Sbjct: 3 SFLVPRLAREDIQLGGYDIPKGTRVMVNVWTIGRDASIW 119
>gb|BI122224.1|BI122224 I003P94P Populus leaf cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 470
Score = 93.6 bits (198), Expect(2) = 9e-025
Identities = 35/69 (50%), Positives = 49/69 (71%)
Frame = -1 / +3
Query: 590 SAVEFKGADFELLPFGAGRRMCPGMAFGLANVELALASLLFHFDWEAPGVSDPAEFDMAE 411
SA++FKG DF+ +PFGAGRR CPG F + +E+ LASLL F+W PG ++P + D+ E
Sbjct: 180 SAIDFKGNDFQFIPFGAGRRGCPGTTFASSLIEITLASLLHKFNWALPGGAEPEDLDITE 359
Query: 410 AFGITARRK 384
A G++ RK
Sbjct: 360 APGLSIHRK 386
Score = 40.0 bits (81), Expect(2) = 9e-025
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = -1 / +3
Query: 710 GYDVPAGTTVLVNVWALGRDGRYW 639
GYD+ A T V++N WA+GRD W
Sbjct: 69 GYDIRAKTRVIINAWAIGRDPSSW 140
>gb|DT524814.1|DT524814 WS02043.C21_K17 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02043_K17 3', mRNA sequence
Length = 890
Score = 83.1 bits (175), Expect(2) = 1e-024
Identities = 32/65 (49%), Positives = 42/65 (64%)
Frame = -1 / -3
Query: 581 EFKGADFELLPFGAGRRMCPGMAFGLANVELALASLLFHFDWEAPGVSDPAEFDMAEAFG 402
+ KG DFEL+PFGAGRR+CPG+ G V L LASL+ FDW+ P + D +E FG
Sbjct: 357 DVKGRDFELIPFGAGRRICPGLPLGHKMVHLTLASLIHSFDWKIADDLTPEDIDTSETFG 178
Query: 401 ITARR 387
+T +
Sbjct: 177 LTLHK 163
Score = 50.1 bits (103), Expect(2) = 1e-024
Identities = 17/39 (43%), Positives = 25/39 (64%)
Frame = -1 / -3
Query: 752 LLLPRQSQEPRRVLGYDVPAGTTVLVNVWALGRDGRYWP 636
LLLPR++ + G+ VP +L+N+WA+GRD WP
Sbjct: 519 LLLPRKAVSEVEMQGFTVPKNAQILINIWAIGRDPAIWP 403
>gb|CV239153.1|CV239153 WS0231.B21_H17 PT-MB-A-13 Populus trichocarpa cDNA clone WS0231_H17
3', mRNA sequence
Length = 751
Score = 86.8 bits (183), Expect(2) = 1e-024
Identities = 35/68 (51%), Positives = 44/68 (64%)
Frame = -1 / -2
Query: 590 SAVEFKGADFELLPFGAGRRMCPGMAFGLANVELALASLLFHFDWEAPGVSDPAEFDMAE 411
S ++ +G +F+L+PFGAGRR CPGM GL V L LA L+ FDWE P P+E DM E
Sbjct: 492 SDIDVRGRNFQLIPFGAGRRSCPGMQLGLTVVRLVLAQLVHCFDWELPNGILPSEVDMTE 313
Query: 410 AFGITARR 387
FG+ R
Sbjct: 312 EFGLVICR 289
Score = 46.4 bits (95), Expect(2) = 1e-024
Identities = 16/38 (42%), Positives = 26/38 (68%)
Frame = -1 / -2
Query: 752 LLLPRQSQEPRRVLGYDVPAGTTVLVNVWALGRDGRYW 639
LL+P ++ E V G+ +P + V++NVWA+GRD + W
Sbjct: 645 LLIPHEAMEDCIVNGFHIPKKSHVIINVWAIGRDPKAW 532
>gb|BI128178.1|BI128178 G072P17Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 507
Score = 86.8 bits (183), Expect(2) = 1e-024
Identities = 31/69 (44%), Positives = 47/69 (68%)
Frame = -1 / +3
Query: 590 SAVEFKGADFELLPFGAGRRMCPGMAFGLANVELALASLLFHFDWEAPGVSDPAEFDMAE 411
S ++FKG DFE +PFG+GRR+CPG+ +V L +A L+ FDW P +P + DM+E
Sbjct: 288 SNLDFKGNDFEFIPFGSGRRICPGLPMAAKHVALIIAYLILFFDWSLPC*KNPTDLDMSE 467
Query: 410 AFGITARRK 384
+G+T R++
Sbjct: 468 NYGLTLRKE 494
Score = 46.4 bits (95), Expect(2) = 1e-024
Identities = 16/37 (43%), Positives = 25/37 (67%)
Frame = -1 / +3
Query: 749 LLPRQSQEPRRVLGYDVPAGTTVLVNVWALGRDGRYW 639
LLP ++ + +V+ Y +P T VL+N WA+GRD + W
Sbjct: 138 LLPHRAIDSCQVMNYTIPKNTQVLLNYWAIGRDPKSW 248
>gb|CV242376.1|CV242376 WS02514.B21.1_O07 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02514_O07 3', mRNA sequence
Length = 867
Score = 78.0 bits (164), Expect(2) = 2e-024
Identities = 30/69 (43%), Positives = 43/69 (62%)
Frame = -1 / -2
Query: 590 SAVEFKGADFELLPFGAGRRMCPGMAFGLANVELALASLLFHFDWEAPGVSDPAEFDMAE 411
++++ +G D+ELLPFGAGRRMCPG GL ++ L++LL F W P E M E
Sbjct: 458 NSIDVRGHDYELLPFGAGRRMCPGYPLGLKVIQATLSNLLHGFKWRLPDGVRKEELSMEE 279
Query: 410 AFGITARRK 384
FG++ +K
Sbjct: 278 IFGLSTPKK 252
Score = 54.7 bits (113), Expect(2) = 2e-024
Identities = 19/38 (50%), Positives = 28/38 (73%)
Frame = -1 / -2
Query: 752 LLLPRQSQEPRRVLGYDVPAGTTVLVNVWALGRDGRYW 639
+L+PR+++E V GYD+ G+ VLVNVW +GRD + W
Sbjct: 611 MLVPREAREDINVNGYDIKKGSRVLVNVWTIGRDPKVW 498
>gb|CV240794.1|CV240794 WS02510.B21_F17 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02510_F17 3', mRNA sequence
Length = 776
Score = 78.0 bits (164), Expect(2) = 2e-024
Identities = 30/69 (43%), Positives = 43/69 (62%)
Frame = -1 / -2
Query: 590 SAVEFKGADFELLPFGAGRRMCPGMAFGLANVELALASLLFHFDWEAPGVSDPAEFDMAE 411
++++ +G D+ELLPFGAGRRMCPG GL ++ L++LL F W P E M E
Sbjct: 475 NSIDVRGHDYELLPFGAGRRMCPGYPLGLKVIQATLSNLLHGFKWRLPDGVRKEELSMEE 296
Query: 410 AFGITARRK 384
FG++ +K
Sbjct: 295 IFGLSTPKK 269
Score = 54.7 bits (113), Expect(2) = 2e-024
Identities = 19/38 (50%), Positives = 28/38 (73%)
Frame = -1 / -2
Query: 752 LLLPRQSQEPRRVLGYDVPAGTTVLVNVWALGRDGRYW 639
+L+PR+++E V GYD+ G+ VLVNVW +GRD + W
Sbjct: 628 MLVPREAREDINVNGYDIKKGSRVLVNVWTIGRDPKVW 515
>gb|CV276808.1|CV276808 WS0141.B21_N12 PTxD-IL-A-5 Populus trichocarpa x Populus deltoides
cDNA clone WS0141_N12 3', mRNA sequence
Length = 675
Score = 89.5 bits (189), Expect(2) = 3e-024
Identities = 34/67 (50%), Positives = 46/67 (68%)
Frame = -1 / -3
Query: 584 VEFKGADFELLPFGAGRRMCPGMAFGLANVELALASLLFHFDWEAPGVSDPAEFDMAEAF 405
V+FKG DF+ +PFG+GRR CPG FG+ VE +A+LL+ FDW P + E DM+E
Sbjct: 409 VDFKGQDFQFIPFGSGRRGCPGALFGVTAVEFMIANLLYWFDWRLPDGATQEELDMSEIC 230
Query: 404 GITARRK 384
G+TA +K
Sbjct: 229 GMTAYKK 209
Score = 42.3 bits (86), Expect(2) = 3e-024
Identities = 17/41 (41%), Positives = 26/41 (63%)
Frame = -1 / -3
Query: 761 ASTLLLPRQSQEPRRVLGYDVPAGTTVLVNVWALGRDGRYW 639
A+ LL+PR++ + GY +P T VLVN +A+ RD +W
Sbjct: 577 AAPLLVPRETSASFELGGYYIPPKTRVLVNAFAIQRDPSFW 455
>gb|CV255138.1|CV255138 WS02412.B21_C21 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02412_C21 3', mRNA sequence
Length = 666
Score = 80.8 bits (170), Expect(2) = 3e-024
Identities = 32/63 (50%), Positives = 44/63 (69%)
Frame = -1 / +3
Query: 584 VEFKGADFELLPFGAGRRMCPGMAFGLANVELALASLLFHFDWEAPGVSDPAEFDMAEAF 405
V+ KG DFEL+PFGAGRR+C GM+ GL V+L A+L+ FDW+ P + +M EA+
Sbjct: 477 VDVKGNDFELIPFGAGRRICAGMSLGLRMVQLLTATLIHAFDWDLADGLVPEKLNMDEAY 656
Query: 404 GIT 396
G+T
Sbjct: 657 GLT 665
Score = 51.0 bits (105), Expect(2) = 3e-024
Identities = 20/41 (48%), Positives = 27/41 (65%)
Frame = -1 / +3
Query: 761 ASTLLLPRQSQEPRRVLGYDVPAGTTVLVNVWALGRDGRYW 639
++ L LPR + E + GY +P G+TVLVNVWA+ RD W
Sbjct: 297 STPLSLPRIAAESCEIGGYHIPKGSTVLVNVWAIARDPDVW 419
>gb|DT515953.1|DT515953 WS02429.B21.1_P20 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02429_P20 3', mRNA sequence
Length = 658
Score = 84.0 bits (177), Expect(2) = 4e-024
Identities = 32/57 (56%), Positives = 42/57 (73%)
Frame = -1 / -3
Query: 590 SAVEFKGADFELLPFGAGRRMCPGMAFGLANVELALASLLFHFDWEAPGVSDPAEFD 420
S+++ KG DFEL+PFGAGRR+CPG+ LA VEL+LA+LL FDWE P + + D
Sbjct: 458 SSIDLKGNDFELIPFGAGRRICPGIFIALATVELSLANLLHKFDWEMPSGVEDIDMD 288
Score = 47.3 bits (97), Expect(2) = 4e-024
Identities = 18/38 (47%), Positives = 26/38 (68%)
Frame = -1 / -3
Query: 752 LLLPRQSQEPRRVLGYDVPAGTTVLVNVWALGRDGRYW 639
LL+PR++ + V GY++PA T V V+ WA+GRD W
Sbjct: 611 LLIPRETTKECCVGGYEIPAKTLVYVSAWAVGRDPEAW 498
>gb|DT511261.1|DT511261 WS02429.BR_P20 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02429_P20 5', mRNA sequence
Length = 657
Score = 84.0 bits (177), Expect(2) = 4e-024
Identities = 32/57 (56%), Positives = 42/57 (73%)
Frame = -1 / +3
Query: 590 SAVEFKGADFELLPFGAGRRMCPGMAFGLANVELALASLLFHFDWEAPGVSDPAEFD 420
S+++ KG DFEL+PFGAGRR+CPG+ LA VEL+LA+LL FDWE P + + D
Sbjct: 201 SSIDLKGNDFELIPFGAGRRICPGIFIALATVELSLANLLHKFDWEMPSGVEDIDMD 371
Score = 47.3 bits (97), Expect(2) = 4e-024
Identities = 18/38 (47%), Positives = 26/38 (68%)
Frame = -1 / +3
Query: 752 LLLPRQSQEPRRVLGYDVPAGTTVLVNVWALGRDGRYW 639
LL+PR++ + V GY++PA T V V+ WA+GRD W
Sbjct: 48 LLIPRETTKECCVGGYEIPAKTLVYVSAWAVGRDPEAW 161
>gb|AY129242.1| Populus x canescens putative cytochrome P450 (P450) mRNA, partial
cds
Length = 812
Score = 78.0 bits (164), Expect(2) = 6e-024
Identities = 29/69 (42%), Positives = 44/69 (63%)
Frame = -1 / +1
Query: 590 SAVEFKGADFELLPFGAGRRMCPGMAFGLANVELALASLLFHFDWEAPGVSDPAEFDMAE 411
++++ +G D+ELLPFGAGRRMCPG GL ++ L++LL F W P + +M E
Sbjct: 364 NSIDVRGHDYELLPFGAGRRMCPGYPLGLKVIQATLSNLLHGFKWRLPDGQKKEDLNMDE 543
Query: 410 AFGITARRK 384
FG++ +K
Sbjct: 544 IFGLSTPKK 570
Score = 52.8 bits (109), Expect(2) = 6e-024
Identities = 18/38 (47%), Positives = 27/38 (71%)
Frame = -1 / +1
Query: 752 LLLPRQSQEPRRVLGYDVPAGTTVLVNVWALGRDGRYW 639
+L+PR ++E + GYD+ G+ VLVNVW +GRD + W
Sbjct: 211 MLVPRAAREDININGYDIKKGSRVLVNVWTIGRDPKVW 324
>gb|CV259182.1|CV259182 WS02010.B21_J23 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02010_J23 3', mRNA sequence
Length = 752
Score = 81.7 bits (172), Expect(2) = 6e-024
Identities = 32/69 (46%), Positives = 45/69 (65%)
Frame = -1 / -2
Query: 590 SAVEFKGADFELLPFGAGRRMCPGMAFGLANVELALASLLFHFDWEAPGVSDPAEFDMAE 411
S +++KG FE LPFG+GRR+C G+ + V+LALA+L+ FDW P P E DM E
Sbjct: 511 SDLDYKGNHFEFLPFGSGRRICAGLPMAVKKVQLALANLIHGFDWSLPNNMLPDELDMDE 332
Query: 410 AFGITARRK 384
+GIT ++
Sbjct: 331 KYGITLMKE 305
Score = 49.2 bits (101), Expect(2) = 6e-024
Identities = 19/38 (50%), Positives = 25/38 (65%)
Frame = -1 / -2
Query: 752 LLLPRQSQEPRRVLGYDVPAGTTVLVNVWALGRDGRYW 639
LL+P ++ E +VL Y +P T VLVNVWA+ RD W
Sbjct: 664 LLIPHRATEDCQVLDYTIPKDTQVLVNVWAIARDPASW 551
>gb|DT521110.1|DT521110 WS02033.B21_G19 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02033_G19 3', mRNA sequence
Length = 752
Score = 81.7 bits (172), Expect(2) = 6e-024
Identities = 32/69 (46%), Positives = 45/69 (65%)
Frame = -1 / -2
Query: 590 SAVEFKGADFELLPFGAGRRMCPGMAFGLANVELALASLLFHFDWEAPGVSDPAEFDMAE 411
S +++KG FE LPFG+GRR+C G+ + V+LALA+L+ FDW P P E DM E
Sbjct: 511 SDLDYKGNHFEFLPFGSGRRICAGLPMAVKKVQLALANLIHGFDWSLPNNMLPDELDMDE 332
Query: 410 AFGITARRK 384
+GIT ++
Sbjct: 331 KYGITLMKE 305
Score = 49.2 bits (101), Expect(2) = 6e-024
Identities = 19/38 (50%), Positives = 25/38 (65%)
Frame = -1 / -2
Query: 752 LLLPRQSQEPRRVLGYDVPAGTTVLVNVWALGRDGRYW 639
LL+P ++ E +VL Y +P T VLVNVWA+ RD W
Sbjct: 664 LLIPHRATEDCQVLDYTIPKDTQVLVNVWAIARDPASW 551
>gb|DT505131.1|DT505131 WS01810.C21_B18 PTxD-IL-N-A-9 Populus trichocarpa x Populus
deltoides cDNA clone WS01810_B18 3', mRNA sequence
Length = 866
Score = 77.6 bits (163), Expect(2) = 8e-024
Identities = 29/69 (42%), Positives = 44/69 (63%)
Frame = -1 / -3
Query: 590 SAVEFKGADFELLPFGAGRRMCPGMAFGLANVELALASLLFHFDWEAPGVSDPAEFDMAE 411
++++ +G D+ELLPFGAGRRMCPG GL ++ L++LL F W P + +M E
Sbjct: 498 NSIDVRGHDYELLPFGAGRRMCPGYPLGLKVIQATLSNLLHGFKWRLPDGQKKDDLNMDE 319
Query: 410 AFGITARRK 384
FG++ +K
Sbjct: 318 IFGLSTPKK 292
Score = 52.8 bits (109), Expect(2) = 8e-024
Identities = 18/38 (47%), Positives = 27/38 (71%)
Frame = -1 / -3
Query: 752 LLLPRQSQEPRRVLGYDVPAGTTVLVNVWALGRDGRYW 639
+L+PR ++E + GYD+ G+ VLVNVW +GRD + W
Sbjct: 651 MLVPRAAREDININGYDIKKGSRVLVNVWTIGRDPKVW 538
>gb|CN520625.1|CN520625 GQ0108.B3_J01 GQ010 Populus trichocarpa x Populus deltoides cDNA
clone GQ0108_J01 5', mRNA sequence
Length = 842
Score = 77.6 bits (163), Expect(2) = 8e-024
Identities = 29/69 (42%), Positives = 44/69 (63%)
Frame = -1 / +2
Query: 590 SAVEFKGADFELLPFGAGRRMCPGMAFGLANVELALASLLFHFDWEAPGVSDPAEFDMAE 411
++++ +G D+ELLPFGAGRRMCPG GL ++ L++LL F W P + +M E
Sbjct: 377 NSIDVRGHDYELLPFGAGRRMCPGYPLGLKVIQATLSNLLHGFKWRLPDGQKKDDLNMDE 556
Query: 410 AFGITARRK 384
FG++ +K
Sbjct: 557 IFGLSTPKK 583
Score = 52.8 bits (109), Expect(2) = 8e-024
Identities = 18/38 (47%), Positives = 27/38 (71%)
Frame = -1 / +2
Query: 752 LLLPRQSQEPRRVLGYDVPAGTTVLVNVWALGRDGRYW 639
+L+PR ++E + GYD+ G+ VLVNVW +GRD + W
Sbjct: 224 MLVPRAAREDININGYDIKKGSRVLVNVWTIGRDPKVW 337
>gb|CV277475.1|CV277475 WS0143.B21_L02 PTxD-IL-A-5 Populus trichocarpa x Populus deltoides
cDNA clone WS0143_L02 3', mRNA sequence
Length = 821
Score = 77.6 bits (163), Expect(2) = 8e-024
Identities = 29/69 (42%), Positives = 44/69 (63%)
Frame = -1 / -2
Query: 590 SAVEFKGADFELLPFGAGRRMCPGMAFGLANVELALASLLFHFDWEAPGVSDPAEFDMAE 411
++++ +G D+ELLPFGAGRRMCPG GL ++ L++LL F W P + +M E
Sbjct: 493 NSIDVRGHDYELLPFGAGRRMCPGYPLGLKVIQATLSNLLHGFKWRLPDGQKKDDLNMDE 314
Query: 410 AFGITARRK 384
FG++ +K
Sbjct: 313 IFGLSTPKK 287
Score = 52.8 bits (109), Expect(2) = 8e-024
Identities = 18/38 (47%), Positives = 27/38 (71%)
Frame = -1 / -2
Query: 752 LLLPRQSQEPRRVLGYDVPAGTTVLVNVWALGRDGRYW 639
+L+PR ++E + GYD+ G+ VLVNVW +GRD + W
Sbjct: 646 MLVPRAAREDININGYDIKKGSRVLVNVWTIGRDPKVW 533
>gb|CK090846.1|CK090846 F027P83.3pR Populus flower cDNA library Populus trichocarpa cDNA
clone F027P83 3', mRNA sequence
Length = 809
Score = 77.6 bits (163), Expect(2) = 8e-024
Identities = 29/69 (42%), Positives = 44/69 (63%)
Frame = -1 / -2
Query: 590 SAVEFKGADFELLPFGAGRRMCPGMAFGLANVELALASLLFHFDWEAPGVSDPAEFDMAE 411
++++ +G D+ELLPFGAGRRMCPG GL ++ L++LL F W P + +M E
Sbjct: 502 NSIDVRGHDYELLPFGAGRRMCPGYPLGLKVIQATLSNLLHGFKWRLPDGQKKDDLNMDE 323
Query: 410 AFGITARRK 384
FG++ +K
Sbjct: 322 IFGLSTPKK 296
Score = 52.8 bits (109), Expect(2) = 8e-024
Identities = 18/38 (47%), Positives = 27/38 (71%)
Frame = -1 / -2
Query: 752 LLLPRQSQEPRRVLGYDVPAGTTVLVNVWALGRDGRYW 639
+L+PR ++E + GYD+ G+ VLVNVW +GRD + W
Sbjct: 655 MLVPRAAREDININGYDIKKGSRVLVNVWTIGRDPKVW 542
Database: Populus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:49 PM
Number of letters in database: 203,408,664
Number of sequences in database: 369,679
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 282,636,198
Number of Sequences: 369679
Number of extensions: 3186100
Number of successful extensions: 27586
Number of sequences better than 1.0e-020: 107
length of database: 67,802,888
effective HSP length: 52
effective length of database: 48,579,580
effective search space used: 9861654740
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)