TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3670867.2.1
(790 letters)
Database: Populus_nucl_with_EST.fasta
369,679 sequences; 203,408,664 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CV227828.1|CV227828 WS0168.B21_F08 PT-DX-A-7 Populus tri... 121 1e-028
gb|CV247238.1|CV247238 WS01117.B21_H24 PT-P-FL-A-2 Populus ... 121 1e-028
gb|CV226929.1|CV226929 WS0165.B21_L05 PT-DX-A-7 Populus tri... 121 1e-028
gb|CV273186.1|CV273186 WS0171.B21_P04 PTxD-NR-A-8 Populus t... 121 1e-028
gb|CV249115.1|CV249115 WS01123.B21_B06 PT-P-FL-A-2 Populus ... 121 1e-028
gb|DT523804.1|DT523804 WS02040.B21_L01 PTxN-IB-N-A-11 Popul... 121 1e-028
gb|CV247475.1|CV247475 WS01118.B21_E17 PT-P-FL-A-2 Populus ... 121 1e-028
gb|CV249960.1|CV249960 WS01125.B21_O02 PT-P-FL-A-2 Populus ... 121 1e-028
gb|CV248464.1|CV248464 WS01120.B21_N11 PT-P-FL-A-2 Populus ... 121 1e-028
gb|CV249252.1|CV249252 WS01123.B21_I13 PT-P-FL-A-2 Populus ... 121 1e-028
gb|BI135897.1|BI135897 F059P92Y Populus flower cDNA library... 121 5e-027
gb|BI137850.1|BI137850 F094P40Y Populus flower cDNA library... 121 5e-027
gb|CV274900.1|CV274900 WS0174.B21.1_L23 PTxD-NR-A-8 Populus... 121 5e-027
gb|DT498500.1|DT498500 WS0115.BR_I15 PT-P-FL-A-2 Populus tr... 121 5e-027
gb|BI137392.1|BI137392 F085P45Y Populus flower cDNA library... 121 7e-027
gb|CV266798.1|CV266798 WS02030.B21_A05 PTxN-IB-N-A-11 Popul... 119 3e-026
gb|CN550557.1|CN550557 GQ0242.B3_J19 GQ024 Populus trichoca... 117 9e-026
gb|CV247583.1|CV247583 WS01118.B21_K12 PT-P-FL-A-2 Populus ... 117 9e-026
gb|CV250352.1|CV250352 WS0113.B21_E19 PT-P-FL-A-2 Populus t... 117 9e-026
gb|CV258651.1|CV258651 WS0201.B21_C09 PTxN-IB-N-A-11 Populu... 117 9e-026
gb|CV262181.1|CV262181 WS02018.B21_N16 PTxN-IB-N-A-11 Popul... 117 9e-026
gb|DT469739.1|DT469739 WS01918.C21_L18 PT-DX-N-A-10 Populus... 117 9e-026
gb|DT476405.1|DT476405 WS01229.B21_H19 PT-GT-FL-A-3 Populus... 117 9e-026
gb|CV253139.1|CV253139 PX0019.B21_P06 PT-X-FL-A-1 Populus t... 111 2e-025
gb|CV275548.1|CV275548 WS0176.B21_N08 PTxD-NR-A-8 Populus t... 115 3e-025
gb|BU895411.1|BU895411 X023G01 Populus wood cDNA library Po... 111 4e-024
gb|DN492498.1|DN492498 X023G01.3pR Populus wood cDNA librar... 111 4e-024
gb|DN502542.1|DN502542 X023G01.5pR Populus wood cDNA librar... 111 4e-024
gb|DT493290.1|DT493290 WS02553.C21_P02 PT-MB-N-A-15 Populus... 111 6e-024
gb|CV232292.1|CV232292 WS0197.B21_C08 PT-DX-N-A-10 Populus ... 111 8e-024
gb|CV230008.1|CV230008 WS01915.B21_C09 PT-DX-N-A-10 Populus... 110 1e-023
gb|CV251527.1|CV251527 WS0117.B21_F17 PT-P-FL-A-2 Populus t... 110 1e-023
gb|CV251545.1|CV251545 WS0117.B21_G23 PT-P-FL-A-2 Populus t... 110 1e-023
gb|CV273865.1|CV273865 WS01712.B21_H01 PTxD-NR-A-8 Populus ... 109 2e-023
gb|DT522942.1|DT522942 WS02038.B21_F16 PTxN-IB-N-A-11 Popul... 109 2e-023
gb|CV249390.1|CV249390 WS01123.B21_P14 PT-P-FL-A-2 Populus ... 109 3e-023
gb|CV259513.1|CV259513 WS02011.B21_I23 PTxN-IB-N-A-11 Popul... 109 3e-023
gb|DT509753.1|DT509753 WS02424.BR_J19 PTxD-ICC-N-A-14 Popul... 109 3e-023
gb|DT520534.1|DT520534 WS02447.B21_N03 PTxD-ICC-N-A-14 Popu... 109 3e-023
gb|DT514363.1|DT514363 WS02424.B21_J19 PTxD-ICC-N-A-14 Popu... 108 4e-023
gb|CV247937.1|CV247937 WS01119.B21_N16 PT-P-FL-A-2 Populus ... 108 5e-023
gb|CV268224.1|CV268224 WS0204.B21_O10 PTxN-IB-N-A-11 Populu... 102 5e-023
gb|CV275204.1|CV275204 WS0175.B21_L11 PTxD-NR-A-8 Populus t... 107 1e-022
gb|CV273595.1|CV273595 WS01711.B21_I14 PTxD-NR-A-8 Populus ... 106 1e-022
gb|CK095550.1|CK095550 UA13CPE10.3pR Populus dormant cambiu... 105 3e-022
gb|CK096539.1|CK096539 UB18CPD05.3pR Populus active cambium... 104 7e-022
gb|CV249238.1|CV249238 WS01123.B21_H12 PT-P-FL-A-2 Populus ... 104 7e-022
gb|CV281693.1|CV281693 WS0182.B21_J19 PTxD-IL-N-A-9 Populus... 101 6e-021
>gb|CV227828.1|CV227828 WS0168.B21_F08 PT-DX-A-7 Populus trichocarpa cDNA clone WS0168_F08
3', mRNA sequence
Length = 839
Score = 121 bits (259), Expect(2) = 1e-028
Identities = 43/113 (38%), Positives = 76/113 (67%)
Frame = -2 / +2
Query: 630 LALSAWMCVLSTLQSALLVSFLLPDPSAWRIHSLFELSCCVFSGVFGSGVTFYLQSWCIS 451
L+++++ C +Q ++ +F+ DP AW HS EL +++GV SG+ F +Q WCI
Sbjct: 374 LSVTSYTCFFGLIQFIIIAAFMERDPQAWIFHSGGELFTILYAGVVASGIAFAVQIWCID 553
Query: 450 VRGPLYSAMFKPLCTVITTVFAAAVLREELHVGSLLGAIAVIAGLYVVLWGKA 292
GP++ A+++P+ T++ + A+ L EE ++G ++GA+ +IAGLY+VLWGK+
Sbjct: 554 RGGPVFVAVYQPVQTLVVAIMASIALGEEFYLGGIIGAVLIIAGLYLVLWGKS 712
Score = 25.4 bits (49), Expect(2) = 1e-028
Identities = 9/25 (36%), Positives = 12/25 (48%)
Frame = -3 / +3
Query: 317 CTWCCGAKRATPTRAGWSQSTTRPI 243
CTW GAK + W + RP+
Sbjct: 687 CTWSYGAKAKXRSSWHWKRLQFRPL 761
>gb|CV247238.1|CV247238 WS01117.B21_H24 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01117_H24 3', mRNA sequence
Length = 882
Score = 121 bits (259), Expect(2) = 1e-028
Identities = 43/113 (38%), Positives = 76/113 (67%)
Frame = -2 / -3
Query: 630 LALSAWMCVLSTLQSALLVSFLLPDPSAWRIHSLFELSCCVFSGVFGSGVTFYLQSWCIS 451
L+++++ C +Q ++ +F+ DP AW HS EL +++GV SG+ F +Q WCI
Sbjct: 547 LSVTSYTCFFGLIQFIIIAAFMERDPQAWIFHSGGELFTILYAGVVASGIAFAVQIWCIG 368
Query: 450 VRGPLYSAMFKPLCTVITTVFAAAVLREELHVGSLLGAIAVIAGLYVVLWGKA 292
GP++ A+++P+ T++ + A+ L EE ++G ++GA+ +IAGLY+VLWGK+
Sbjct: 367 RGGPVFVAVYQPVQTLVVAIMASIALGEEFYLGGIIGAVLIIAGLYLVLWGKS 209
Score = 24.9 bits (48), Expect(2) = 1e-028
Identities = 9/25 (36%), Positives = 12/25 (48%)
Frame = -3 / -1
Query: 317 CTWCCGAKRATPTRAGWSQSTTRPI 243
CTW GAK + W + RP+
Sbjct: 234 CTWSYGAKAKKRSSWHWKRLQFRPL 160
>gb|CV226929.1|CV226929 WS0165.B21_L05 PT-DX-A-7 Populus trichocarpa cDNA clone WS0165_L05
3', mRNA sequence
Length = 829
Score = 121 bits (259), Expect(2) = 1e-028
Identities = 43/113 (38%), Positives = 76/113 (67%)
Frame = -2 / -2
Query: 630 LALSAWMCVLSTLQSALLVSFLLPDPSAWRIHSLFELSCCVFSGVFGSGVTFYLQSWCIS 451
L+++++ C +Q ++ +F+ DP AW HS EL +++GV SG+ F +Q WCI
Sbjct: 798 LSVTSYTCFFGLIQFIIIAAFMERDPQAWIFHSGGELFTILYAGVVASGIAFAVQIWCID 619
Query: 450 VRGPLYSAMFKPLCTVITTVFAAAVLREELHVGSLLGAIAVIAGLYVVLWGKA 292
GP++ A+++P+ T++ + A+ L EE ++G ++GA+ +IAGLY+VLWGK+
Sbjct: 618 RGGPVFVAVYQPVQTLVVAIMASIALGEEFYLGGIIGAVLIIAGLYLVLWGKS 460
Score = 24.9 bits (48), Expect(2) = 1e-028
Identities = 9/25 (36%), Positives = 12/25 (48%)
Frame = -3 / -3
Query: 317 CTWCCGAKRATPTRAGWSQSTTRPI 243
CTW GAK + W + RP+
Sbjct: 485 CTWSYGAKAKKRSSWHWKRLQFRPL 411
>gb|CV273186.1|CV273186 WS0171.B21_P04 PTxD-NR-A-8 Populus trichocarpa x Populus deltoides
cDNA clone WS0171_P04 3', mRNA sequence
Length = 800
Score = 121 bits (259), Expect(2) = 1e-028
Identities = 43/113 (38%), Positives = 76/113 (67%)
Frame = -2 / -2
Query: 630 LALSAWMCVLSTLQSALLVSFLLPDPSAWRIHSLFELSCCVFSGVFGSGVTFYLQSWCIS 451
L+++++ C +Q ++ +F+ DP AW HS EL +++GV SG+ F +Q WCI
Sbjct: 547 LSVTSYTCFFGLIQFIIIAAFMERDPQAWIFHSGGELFTILYAGVVASGIAFAVQIWCID 368
Query: 450 VRGPLYSAMFKPLCTVITTVFAAAVLREELHVGSLLGAIAVIAGLYVVLWGKA 292
GP++ A+++P+ T++ + A+ L EE ++G ++GA+ +IAGLY+VLWGK+
Sbjct: 367 RGGPVFVAVYQPVQTLVVAIMASIALGEEFYLGGIIGAVLIIAGLYLVLWGKS 209
Score = 24.9 bits (48), Expect(2) = 1e-028
Identities = 9/25 (36%), Positives = 12/25 (48%)
Frame = -3 / -3
Query: 317 CTWCCGAKRATPTRAGWSQSTTRPI 243
CTW GAK + W + RP+
Sbjct: 234 CTWSYGAKAKKRSSWHWKRLQFRPL 160
>gb|CV249115.1|CV249115 WS01123.B21_B06 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01123_B06 3', mRNA sequence
Length = 746
Score = 121 bits (259), Expect(2) = 1e-028
Identities = 43/113 (38%), Positives = 76/113 (67%)
Frame = -2 / -3
Query: 630 LALSAWMCVLSTLQSALLVSFLLPDPSAWRIHSLFELSCCVFSGVFGSGVTFYLQSWCIS 451
L+++++ C +Q ++ +F+ DP AW HS EL +++GV SG+ F +Q WCI
Sbjct: 546 LSVTSYTCFFGLIQFIIIAAFMERDPQAWIFHSGGELFTILYAGVVASGIAFAVQIWCID 367
Query: 450 VRGPLYSAMFKPLCTVITTVFAAAVLREELHVGSLLGAIAVIAGLYVVLWGKA 292
GP++ A+++P+ T++ + A+ L EE ++G ++GA+ +IAGLY+VLWGK+
Sbjct: 366 RGGPVFVAVYQPVQTLVVAIMASIALGEEFYLGGIIGAVLIIAGLYLVLWGKS 208
Score = 24.9 bits (48), Expect(2) = 1e-028
Identities = 9/25 (36%), Positives = 12/25 (48%)
Frame = -3 / -1
Query: 317 CTWCCGAKRATPTRAGWSQSTTRPI 243
CTW GAK + W + RP+
Sbjct: 233 CTWSYGAKAKKRSSWHWKRLQFRPL 159
>gb|DT523804.1|DT523804 WS02040.B21_L01 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02040_L01 3', mRNA sequence
Length = 706
Score = 121 bits (259), Expect(2) = 1e-028
Identities = 43/113 (38%), Positives = 76/113 (67%)
Frame = -2 / -2
Query: 630 LALSAWMCVLSTLQSALLVSFLLPDPSAWRIHSLFELSCCVFSGVFGSGVTFYLQSWCIS 451
L+++++ C +Q ++ +F+ DP AW HS EL +++GV SG+ F +Q WCI
Sbjct: 546 LSVTSYTCFFGLIQFIIIAAFMERDPQAWIFHSGGELFTILYAGVVASGIAFAVQIWCID 367
Query: 450 VRGPLYSAMFKPLCTVITTVFAAAVLREELHVGSLLGAIAVIAGLYVVLWGKA 292
GP++ A+++P+ T++ + A+ L EE ++G ++GA+ +IAGLY+VLWGK+
Sbjct: 366 RGGPVFVAVYQPVQTLVVAIMASIALGEEFYLGGIIGAVLIIAGLYLVLWGKS 208
Score = 24.9 bits (48), Expect(2) = 1e-028
Identities = 9/25 (36%), Positives = 12/25 (48%)
Frame = -3 / -3
Query: 317 CTWCCGAKRATPTRAGWSQSTTRPI 243
CTW GAK + W + RP+
Sbjct: 233 CTWSYGAKAKKRSSWHWRRPQFRPL 159
>gb|CV247475.1|CV247475 WS01118.B21_E17 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01118_E17 3', mRNA sequence
Length = 694
Score = 121 bits (259), Expect(2) = 1e-028
Identities = 43/113 (38%), Positives = 76/113 (67%)
Frame = -2 / -2
Query: 630 LALSAWMCVLSTLQSALLVSFLLPDPSAWRIHSLFELSCCVFSGVFGSGVTFYLQSWCIS 451
L+++++ C +Q ++ +F+ DP AW HS EL +++GV SG+ F +Q WCI
Sbjct: 546 LSVTSYTCFFGLIQFIIIAAFMERDPQAWIFHSGGELFTILYAGVVASGIAFAVQIWCIG 367
Query: 450 VRGPLYSAMFKPLCTVITTVFAAAVLREELHVGSLLGAIAVIAGLYVVLWGKA 292
GP++ A+++P+ T++ + A+ L EE ++G ++GA+ +IAGLY+VLWGK+
Sbjct: 366 RGGPVFVAVYQPVQTLVVAIMASIALGEEFYLGGIIGAVLIIAGLYLVLWGKS 208
Score = 24.9 bits (48), Expect(2) = 1e-028
Identities = 9/25 (36%), Positives = 12/25 (48%)
Frame = -3 / -3
Query: 317 CTWCCGAKRATPTRAGWSQSTTRPI 243
CTW GAK + W + RP+
Sbjct: 233 CTWSYGAKAKKRSSWHWKRLQFRPL 159
>gb|CV249960.1|CV249960 WS01125.B21_O02 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01125_O02 3', mRNA sequence
Length = 676
Score = 121 bits (259), Expect(2) = 1e-028
Identities = 43/113 (38%), Positives = 76/113 (67%)
Frame = -2 / -2
Query: 630 LALSAWMCVLSTLQSALLVSFLLPDPSAWRIHSLFELSCCVFSGVFGSGVTFYLQSWCIS 451
L+++++ C +Q ++ +F+ DP AW HS EL +++GV SG+ F +Q WCI
Sbjct: 546 LSVTSYTCFFGLIQFIIIAAFMERDPQAWIFHSGGELFTILYAGVVASGIAFAVQIWCID 367
Query: 450 VRGPLYSAMFKPLCTVITTVFAAAVLREELHVGSLLGAIAVIAGLYVVLWGKA 292
GP++ A+++P+ T++ + A+ L EE ++G ++GA+ +IAGLY+VLWGK+
Sbjct: 366 RGGPVFVAVYQPVQTLVVAIMASIALGEEFYLGGIIGAVLIIAGLYLVLWGKS 208
Score = 24.9 bits (48), Expect(2) = 1e-028
Identities = 9/25 (36%), Positives = 12/25 (48%)
Frame = -3 / -3
Query: 317 CTWCCGAKRATPTRAGWSQSTTRPI 243
CTW GAK + W + RP+
Sbjct: 233 CTWSYGAKAKKRSSWHWKRLQFRPL 159
>gb|CV248464.1|CV248464 WS01120.B21_N11 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01120_N11 3', mRNA sequence
Length = 668
Score = 121 bits (259), Expect(2) = 1e-028
Identities = 43/113 (38%), Positives = 76/113 (67%)
Frame = -2 / -2
Query: 630 LALSAWMCVLSTLQSALLVSFLLPDPSAWRIHSLFELSCCVFSGVFGSGVTFYLQSWCIS 451
L+++++ C +Q ++ +F+ DP AW HS EL +++GV SG+ F +Q WCI
Sbjct: 544 LSVTSYTCFFGLIQFIIIAAFMERDPQAWIFHSGGELFTILYAGVVASGIAFAVQIWCID 365
Query: 450 VRGPLYSAMFKPLCTVITTVFAAAVLREELHVGSLLGAIAVIAGLYVVLWGKA 292
GP++ A+++P+ T++ + A+ L EE ++G ++GA+ +IAGLY+VLWGK+
Sbjct: 364 RGGPVFVAVYQPVQTLVVAIMASIALGEEFYLGGIIGAVLIIAGLYLVLWGKS 206
Score = 24.9 bits (48), Expect(2) = 1e-028
Identities = 9/25 (36%), Positives = 12/25 (48%)
Frame = -3 / -3
Query: 317 CTWCCGAKRATPTRAGWSQSTTRPI 243
CTW GAK + W + RP+
Sbjct: 231 CTWSYGAKAKKRSSWHWKRLQFRPL 157
>gb|CV249252.1|CV249252 WS01123.B21_I13 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01123_I13 3', mRNA sequence
Length = 617
Score = 121 bits (259), Expect(2) = 1e-028
Identities = 43/113 (38%), Positives = 76/113 (67%)
Frame = -2 / -2
Query: 630 LALSAWMCVLSTLQSALLVSFLLPDPSAWRIHSLFELSCCVFSGVFGSGVTFYLQSWCIS 451
L+++++ C +Q ++ +F+ DP AW HS EL +++GV SG+ F +Q WCI
Sbjct: 544 LSVTSYTCFFGLIQFIIIAAFMERDPQAWIFHSGGELFTILYAGVVASGIAFAVQIWCID 365
Query: 450 VRGPLYSAMFKPLCTVITTVFAAAVLREELHVGSLLGAIAVIAGLYVVLWGKA 292
GP++ A+++P+ T++ + A+ L EE ++G ++GA+ +IAGLY+VLWGK+
Sbjct: 364 RGGPVFVAVYQPVQTLVVAIMASIALGEEFYLGGIIGAVLIIAGLYLVLWGKS 206
Score = 24.9 bits (48), Expect(2) = 1e-028
Identities = 9/25 (36%), Positives = 12/25 (48%)
Frame = -3 / -3
Query: 317 CTWCCGAKRATPTRAGWSQSTTRPI 243
CTW GAK + W + RP+
Sbjct: 231 CTWSYGAKAKKRSSWHWKRLQFRPL 157
>gb|BI135897.1|BI135897 F059P92Y Populus flower cDNA library Populus trichocarpa cDNA, mRNA
sequence
Length = 498
Score = 121 bits (259), Expect = 5e-027
Identities = 43/113 (38%), Positives = 76/113 (67%)
Frame = -2 / +2
Query: 630 LALSAWMCVLSTLQSALLVSFLLPDPSAWRIHSLFELSCCVFSGVFGSGVTFYLQSWCIS 451
L+++++ C +Q ++ +F+ DP AW HS EL +++GV SG+ F +Q WCI
Sbjct: 146 LSVTSYTCFFGLIQFIIIAAFMERDPQAWIFHSGGELFTILYAGVVASGIAFAVQIWCID 325
Query: 450 VRGPLYSAMFKPLCTVITTVFAAAVLREELHVGSLLGAIAVIAGLYVVLWGKA 292
GP++ A+++P+ T++ + A+ L EE ++G ++GA+ +IAGLY+VLWGK+
Sbjct: 326 RGGPVFVAVYQPVQTLVVAIMASIALGEEFYLGGIIGAVLIIAGLYLVLWGKS 484
>gb|BI137850.1|BI137850 F094P40Y Populus flower cDNA library Populus trichocarpa cDNA, mRNA
sequence
Length = 372
Score = 121 bits (259), Expect = 5e-027
Identities = 43/113 (38%), Positives = 76/113 (67%)
Frame = -2 / +2
Query: 630 LALSAWMCVLSTLQSALLVSFLLPDPSAWRIHSLFELSCCVFSGVFGSGVTFYLQSWCIS 451
L+++++ C +Q ++ +F+ DP AW HS EL +++GV SG+ F +Q WCI
Sbjct: 29 LSVTSYTCFFGLIQFIIIAAFMERDPQAWIFHSGGELFTILYAGVVASGIAFAVQIWCID 208
Query: 450 VRGPLYSAMFKPLCTVITTVFAAAVLREELHVGSLLGAIAVIAGLYVVLWGKA 292
GP++ A+++P+ T++ + A+ L EE ++G ++GA+ +IAGLY+VLWGK+
Sbjct: 209 RGGPVFVAVYQPVQTLVVAIMASIALGEEFYLGGIIGAVLIIAGLYLVLWGKS 367
>gb|CV274900.1|CV274900 WS0174.B21.1_L23 PTxD-NR-A-8 Populus trichocarpa x Populus
deltoides cDNA clone WS0174_L23 3', mRNA sequence
Length = 858
Score = 121 bits (259), Expect = 5e-027
Identities = 43/113 (38%), Positives = 76/113 (67%)
Frame = -2 / -3
Query: 630 LALSAWMCVLSTLQSALLVSFLLPDPSAWRIHSLFELSCCVFSGVFGSGVTFYLQSWCIS 451
L+++++ C +Q ++ +F+ DP AW HS EL +++GV SG+ F +Q WCI
Sbjct: 544 LSVTSYTCFFGLIQFIIIAAFMERDPQAWIFHSGGELFTILYAGVVASGIAFAVQIWCID 365
Query: 450 VRGPLYSAMFKPLCTVITTVFAAAVLREELHVGSLLGAIAVIAGLYVVLWGKA 292
GP++ A+++P+ T++ + A+ L EE ++G ++GA+ +IAGLY+VLWGK+
Sbjct: 364 RGGPVFVAVYQPVQTLVVAIMASIALGEEFYLGGIIGAVLIIAGLYLVLWGKS 206
>gb|DT498500.1|DT498500 WS0115.BR_I15 PT-P-FL-A-2 Populus trichocarpa cDNA clone WS0115_I15
5', mRNA sequence
Length = 589
Score = 121 bits (259), Expect = 5e-027
Identities = 43/113 (38%), Positives = 76/113 (67%)
Frame = -2 / +3
Query: 630 LALSAWMCVLSTLQSALLVSFLLPDPSAWRIHSLFELSCCVFSGVFGSGVTFYLQSWCIS 451
L+++++ C +Q ++ +F+ DP AW HS EL +++GV SG+ F +Q WCI
Sbjct: 249 LSVTSYTCFFGLIQFIIIAAFMERDPQAWIFHSGGELFTILYAGVVASGIAFAVQIWCID 428
Query: 450 VRGPLYSAMFKPLCTVITTVFAAAVLREELHVGSLLGAIAVIAGLYVVLWGKA 292
GP++ A+++P+ T++ + A+ L EE ++G ++GA+ +IAGLY+VLWGK+
Sbjct: 429 RGGPVFVAVYQPVQTLVVAIMASIALGEEFYLGGIIGAVLIIAGLYLVLWGKS 587
>gb|BI137392.1|BI137392 F085P45Y Populus flower cDNA library Populus trichocarpa cDNA, mRNA
sequence
Length = 484
Score = 121 bits (258), Expect = 7e-027
Identities = 43/112 (38%), Positives = 75/112 (66%)
Frame = -2 / +3
Query: 630 LALSAWMCVLSTLQSALLVSFLLPDPSAWRIHSLFELSCCVFSGVFGSGVTFYLQSWCIS 451
L+++++ C +Q ++ +F+ DP AW HS EL +++GV SG+ F +Q WCI
Sbjct: 147 LSVTSYTCFFGLIQFIIIAAFMERDPQAWIFHSGGELFTILYAGVVASGIAFAVQIWCID 326
Query: 450 VRGPLYSAMFKPLCTVITTVFAAAVLREELHVGSLLGAIAVIAGLYVVLWGK 295
GP++ A+++P+ T++ + A+ L EE ++G ++GA+ +IAGLY+VLWGK
Sbjct: 327 RGGPVFVAVYQPVQTLVVAIMASIALGEEFYLGGIIGAVLIIAGLYLVLWGK 482
>gb|CV266798.1|CV266798 WS02030.B21_A05 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02030_A05 3', mRNA sequence
Length = 862
Score = 119 bits (254), Expect = 3e-026
Identities = 42/113 (37%), Positives = 75/113 (66%)
Frame = -2 / -3
Query: 630 LALSAWMCVLSTLQSALLVSFLLPDPSAWRIHSLFELSCCVFSGVFGSGVTFYLQSWCIS 451
L+++++ C +Q ++ +F+ DP AW HS EL +++GV SG+ F +Q WCI
Sbjct: 794 LSVTSYTCFFGLIQFLIIAAFMERDPQAWIFHSGGELFTILYAGVVASGIAFAVQIWCID 615
Query: 450 VRGPLYSAMFKPLCTVITTVFAAAVLREELHVGSLLGAIAVIAGLYVVLWGKA 292
GP++ A+++P+ T++ + A+ L EE ++G ++GA+ +I GLY+VLWGK+
Sbjct: 614 RGGPVFVAVYQPVQTLVVAIMASIALGEEFYLGGIIGAVLIIIGLYLVLWGKS 456
>gb|CN550557.1|CN550557 GQ0242.B3_J19 GQ024 Populus trichocarpa x Populus deltoides cDNA
clone GQ0242_J19 5', mRNA sequence
Length = 689
Score = 117 bits (250), Expect = 9e-026
Identities = 42/113 (37%), Positives = 74/113 (65%)
Frame = -2 / +3
Query: 630 LALSAWMCVLSTLQSALLVSFLLPDPSAWRIHSLFELSCCVFSGVFGSGVTFYLQSWCIS 451
L+++++ C +Q ++ +F+ DP AW HS EL +++GV SG+ F +Q WCI
Sbjct: 27 LSVTSYTCFFGLIQFLIIAAFMERDPQAWIFHSGGELFTILYAGVVASGIAFAVQIWCID 206
Query: 450 VRGPLYSAMFKPLCTVITTVFAAAVLREELHVGSLLGAIAVIAGLYVVLWGKA 292
GP++ A+++P+ T++ + A+ L EE ++G ++GA +I GLY+VLWGK+
Sbjct: 207 RGGPVFVAVYQPVQTLVVAIMASIALGEEFYLGGIIGAALIIIGLYLVLWGKS 365
>gb|CV247583.1|CV247583 WS01118.B21_K12 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01118_K12 3', mRNA sequence
Length = 723
Score = 117 bits (250), Expect = 9e-026
Identities = 42/113 (37%), Positives = 74/113 (65%)
Frame = -2 / -1
Query: 630 LALSAWMCVLSTLQSALLVSFLLPDPSAWRIHSLFELSCCVFSGVFGSGVTFYLQSWCIS 451
L+++++ C +Q ++ +F+ DP AW HS EL +++GV SG+ F +Q WCI
Sbjct: 546 LSVTSYTCFFGLIQFLIIAAFMERDPQAWIFHSGGELFTILYAGVVASGIAFAVQIWCID 367
Query: 450 VRGPLYSAMFKPLCTVITTVFAAAVLREELHVGSLLGAIAVIAGLYVVLWGKA 292
GP++ A+++P+ T++ + A+ L EE ++G ++GA +I GLY+VLWGK+
Sbjct: 366 RGGPVFVAVYQPVQTLVVAIMASIALGEEFYLGGIIGAALIIIGLYLVLWGKS 208
>gb|CV250352.1|CV250352 WS0113.B21_E19 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS0113_E19 3', mRNA sequence
Length = 675
Score = 117 bits (250), Expect = 9e-026
Identities = 42/113 (37%), Positives = 74/113 (65%)
Frame = -2 / -3
Query: 630 LALSAWMCVLSTLQSALLVSFLLPDPSAWRIHSLFELSCCVFSGVFGSGVTFYLQSWCIS 451
L+++++ C +Q ++ +F+ DP AW HS EL +++GV SG+ F +Q WCI
Sbjct: 547 LSVTSYTCFFGLIQFLIIAAFMERDPQAWIFHSGGELFTILYAGVVASGIAFAVQIWCID 368
Query: 450 VRGPLYSAMFKPLCTVITTVFAAAVLREELHVGSLLGAIAVIAGLYVVLWGKA 292
GP++ A+++P+ T++ + A+ L EE ++G ++GA +I GLY+VLWGK+
Sbjct: 367 RGGPVFVAVYQPVQTLVVAIMASIALGEEFYLGGIIGAALIIIGLYLVLWGKS 209
>gb|CV258651.1|CV258651 WS0201.B21_C09 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS0201_C09 3', mRNA sequence
Length = 819
Score = 117 bits (250), Expect = 9e-026
Identities = 42/113 (37%), Positives = 74/113 (65%)
Frame = -2 / -2
Query: 630 LALSAWMCVLSTLQSALLVSFLLPDPSAWRIHSLFELSCCVFSGVFGSGVTFYLQSWCIS 451
L+++++ C +Q ++ +F+ DP AW HS EL +++GV SG+ F +Q WCI
Sbjct: 779 LSVTSYTCFFGLIQFLIIAAFMERDPQAWIFHSGGELFTILYAGVVASGIAFAVQIWCID 600
Query: 450 VRGPLYSAMFKPLCTVITTVFAAAVLREELHVGSLLGAIAVIAGLYVVLWGKA 292
GP++ A+++P+ T++ + A+ L EE ++G ++GA +I GLY+VLWGK+
Sbjct: 599 RGGPVFVAVYQPVQTLVVAIMASIALGEEFYLGGIIGAALIIIGLYLVLWGKS 441
>gb|CV262181.1|CV262181 WS02018.B21_N16 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02018_N16 3', mRNA sequence
Length = 845
Score = 117 bits (250), Expect = 9e-026
Identities = 42/113 (37%), Positives = 74/113 (65%)
Frame = -2 / -2
Query: 630 LALSAWMCVLSTLQSALLVSFLLPDPSAWRIHSLFELSCCVFSGVFGSGVTFYLQSWCIS 451
L+++++ C +Q ++ +F+ DP AW HS EL +++GV SG+ F +Q WCI
Sbjct: 826 LSVTSYTCFFGLIQFLIIAAFMERDPQAWIFHSGGELFTILYAGVVASGIAFAVQIWCID 647
Query: 450 VRGPLYSAMFKPLCTVITTVFAAAVLREELHVGSLLGAIAVIAGLYVVLWGKA 292
GP++ A+++P+ T++ + A+ L EE ++G ++GA +I GLY+VLWGK+
Sbjct: 646 RGGPVFVAVYQPVQTLVVAIMASIALGEEFYLGGIIGAALIIIGLYLVLWGKS 488
>gb|DT469739.1|DT469739 WS01918.C21_L18 PT-DX-N-A-10 Populus trichocarpa cDNA clone
WS01918_L18 3', mRNA sequence
Length = 808
Score = 117 bits (250), Expect = 9e-026
Identities = 42/113 (37%), Positives = 74/113 (65%)
Frame = -2 / -2
Query: 630 LALSAWMCVLSTLQSALLVSFLLPDPSAWRIHSLFELSCCVFSGVFGSGVTFYLQSWCIS 451
L+++++ C +Q ++ +F+ DP AW HS EL +++GV SG+ F +Q WCI
Sbjct: 549 LSVTSYTCFFGLIQFLIIAAFMERDPQAWIFHSGGELFTILYAGVVASGIAFAVQIWCID 370
Query: 450 VRGPLYSAMFKPLCTVITTVFAAAVLREELHVGSLLGAIAVIAGLYVVLWGKA 292
GP++ A+++P+ T++ + A+ L EE ++G ++GA +I GLY+VLWGK+
Sbjct: 369 RGGPVFVAVYQPVQTLVVAIMASIALGEEFYLGGIIGAALIIIGLYLVLWGKS 211
>gb|DT476405.1|DT476405 WS01229.B21_H19 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01229_H19 3', mRNA sequence
Length = 856
Score = 117 bits (250), Expect = 9e-026
Identities = 42/113 (37%), Positives = 74/113 (65%)
Frame = -2 / -1
Query: 630 LALSAWMCVLSTLQSALLVSFLLPDPSAWRIHSLFELSCCVFSGVFGSGVTFYLQSWCIS 451
L+++++ C +Q ++ +F+ DP AW HS EL +++GV SG+ F +Q WCI
Sbjct: 547 LSVTSYTCFFGLIQFLIIAAFMERDPQAWIFHSGGELFTILYAGVVASGIAFAVQIWCID 368
Query: 450 VRGPLYSAMFKPLCTVITTVFAAAVLREELHVGSLLGAIAVIAGLYVVLWGKA 292
GP++ A+++P+ T++ + A+ L EE ++G ++GA +I GLY+VLWGK+
Sbjct: 367 RGGPVFVAVYQPVQTLVVAIMASIALGEEFYLGGIIGAALIIIGLYLVLWGKS 209
>gb|CV253139.1|CV253139 PX0019.B21_P06 PT-X-FL-A-1 Populus trichocarpa cDNA clone
PX0019_P06 3', mRNA sequence
Length = 660
Score = 111 bits (236), Expect(2) = 2e-025
Identities = 40/101 (39%), Positives = 67/101 (66%)
Frame = -2 / -3
Query: 594 LQSALLVSFLLPDPSAWRIHSLFELSCCVFSGVFGSGVTFYLQSWCISVRGPLYSAMFKP 415
+Q ++ +F+ DP AW HS EL +++GV SG+ F +Q WCI GP++ A+++P
Sbjct: 655 IQFIIIAAFMERDPQAWIFHSGGELFTILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQP 476
Query: 414 LCTVITTVFAAAVLREELHVGSLLGAIAVIAGLYVVLWGKA 292
+ T++ + A+ EE + G ++GA+ +IAGLY+VLWGK+
Sbjct: 475 VQTLVVAIMASIAXGEEFYXGGIIGAVLIIAGLYLVLWGKS 353
Score = 24.9 bits (48), Expect(2) = 2e-025
Identities = 9/25 (36%), Positives = 12/25 (48%)
Frame = -3 / -1
Query: 317 CTWCCGAKRATPTRAGWSQSTTRPI 243
CTW GAK + W + RP+
Sbjct: 378 CTWSYGAKAKKRSSWHWKRLQFRPL 304
>gb|CV275548.1|CV275548 WS0176.B21_N08 PTxD-NR-A-8 Populus trichocarpa x Populus deltoides
cDNA clone WS0176_N08 3', mRNA sequence
Length = 548
Score = 115 bits (246), Expect = 3e-025
Identities = 41/112 (36%), Positives = 73/112 (65%)
Frame = -2 / +1
Query: 627 ALSAWMCVLSTLQSALLVSFLLPDPSAWRIHSLFELSCCVFSGVFGSGVTFYLQSWCISV 448
+++++ C +Q ++ +F+ DP AW HS EL +++GV SG+ F +Q WCI
Sbjct: 1 SVTSYTCFFGLIQFLIIAAFMERDPQAWIFHSGGELFTILYAGVVASGIAFAVQIWCIDR 180
Query: 447 RGPLYSAMFKPLCTVITTVFAAAVLREELHVGSLLGAIAVIAGLYVVLWGKA 292
GP++ A+++P+ T++ + A+ L EE ++G ++GA +I GLY+VLWGK+
Sbjct: 181 GGPVFVAVYQPVQTLVVAIMASIALGEEFYLGGIIGAALIIIGLYLVLWGKS 336
>gb|BU895411.1|BU895411 X023G01 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 602
Score = 111 bits (238), Expect = 4e-024
Identities = 44/113 (38%), Positives = 71/113 (62%)
Frame = -2 / +1
Query: 630 LALSAWMCVLSTLQSALLVSFLLPDPSAWRIHSLFELSCCVFSGVFGSGVTFYLQSWCIS 451
L LS C++S++QS ++ + L + ++W+I +L+ + GVF +G + LQ WCI
Sbjct: 109 LRLSTLQCLISSVQSTIIAAALERERNSWKIGWDIQLASLAYCGVFVTGAAYGLQIWCIE 288
Query: 450 VRGPLYSAMFKPLCTVITTVFAAAVLREELHVGSLLGAIAVIAGLYVVLWGKA 292
+GP Y +MF PL V+T +F+A E L+ S+LG I ++ GLY VLWG++
Sbjct: 289 KKGPFYVSMFSPLALVLTAIFSAIFWAERLNWQSILGGILIVGGLYGVLWGRS 447
>gb|DN492498.1|DN492498 X023G01.3pR Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA clone X023G01 3', mRNA sequence
Length = 608
Score = 111 bits (238), Expect = 4e-024
Identities = 44/113 (38%), Positives = 71/113 (62%)
Frame = -2 / -1
Query: 630 LALSAWMCVLSTLQSALLVSFLLPDPSAWRIHSLFELSCCVFSGVFGSGVTFYLQSWCIS 451
L LS C++S++QS ++ + L + ++W+I +L+ + GVF +G + LQ WCI
Sbjct: 500 LRLSTLQCLISSVQSTIIAAALERERNSWKIGWDIQLASLAYCGVFVTGAAYGLQIWCIE 321
Query: 450 VRGPLYSAMFKPLCTVITTVFAAAVLREELHVGSLLGAIAVIAGLYVVLWGKA 292
+GP Y +MF PL V+T +F+A E L+ S+LG I ++ GLY VLWG++
Sbjct: 320 KKGPFYVSMFSPLALVLTAIFSAIFWAERLNWQSILGGILIVGGLYGVLWGRS 162
>gb|DN502542.1|DN502542 X023G01.5pR Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA clone X023G01 5', mRNA sequence
Length = 476
Score = 111 bits (238), Expect = 4e-024
Identities = 44/113 (38%), Positives = 71/113 (62%)
Frame = -2 / +1
Query: 630 LALSAWMCVLSTLQSALLVSFLLPDPSAWRIHSLFELSCCVFSGVFGSGVTFYLQSWCIS 451
L LS C++S++QS ++ + L + ++W+I +L+ + GVF +G + LQ WCI
Sbjct: 109 LRLSTLQCLISSVQSTIIAAALERERNSWKIGWDIQLASLAYCGVFVTGAAYGLQIWCIE 288
Query: 450 VRGPLYSAMFKPLCTVITTVFAAAVLREELHVGSLLGAIAVIAGLYVVLWGKA 292
+GP Y +MF PL V+T +F+A E L+ S+LG I ++ GLY VLWG++
Sbjct: 289 KKGPFYVSMFSPLALVLTAIFSAIFWAERLNWQSILGGILIVGGLYGVLWGRS 447
>gb|DT493290.1|DT493290 WS02553.C21_P02 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02553_P02 3', mRNA sequence
Length = 799
Score = 111 bits (237), Expect = 6e-024
Identities = 42/115 (36%), Positives = 73/115 (63%)
Frame = -2 / -1
Query: 636 SPLALSAWMCVLSTLQSALLVSFLLPDPSAWRIHSLFELSCCVFSGVFGSGVTFYLQSWC 457
S +A+ +++C+ T+QS+++ +P+AW++ EL ++S V GS VTF + +WC
Sbjct: 574 SEMAMVSFLCLFGTIQSSIVSLIAERNPNAWKLRPDIELISIIYSAVVGSVVTFGVTAWC 395
Query: 456 ISVRGPLYSAMFKPLCTVITTVFAAAVLREELHVGSLLGAIAVIAGLYVVLWGKA 292
IS +GP++ A+FKP+ L + LHVGS++GAI ++AG Y V+W ++
Sbjct: 394 ISKKGPVFVAIFKPVGIATAAFLGVIFLGDTLHVGSIVGAIIIVAGFYGVIWAQS 230
>gb|CV232292.1|CV232292 WS0197.B21_C08 PT-DX-N-A-10 Populus trichocarpa cDNA clone
WS0197_C08 3', mRNA sequence
Length = 701
Score = 111 bits (236), Expect = 8e-024
Identities = 40/109 (36%), Positives = 72/109 (66%)
Frame = -2 / +2
Query: 630 LALSAWMCVLSTLQSALLVSFLLPDPSAWRIHSLFELSCCVFSGVFGSGVTFYLQSWCIS 451
L+++++ C +Q ++ +F+ DP AW HS EL +++GV SG+ F +Q WCI
Sbjct: 374 LSVTSYTCFFGLIQFIIIAAFMERDPQAWIFHSGGELFTILYAGVVASGIAFAVQIWCID 553
Query: 450 VRGPLYSAMFKPLCTVITTVFAAAVLREELHVGSLLGAIAVIAGLYVVL 304
GP++ A+++P+ T++ + A+ L EE ++G ++GA+ +IAGLY+VL
Sbjct: 554 RGGPVFVAVYQPVQTLVVAIMASIALGEEFYLGGIIGAVLIIAGLYLVL 700
>gb|CV230008.1|CV230008 WS01915.B21_C09 PT-DX-N-A-10 Populus trichocarpa cDNA clone
WS01915_C09 3', mRNA sequence
Length = 790
Score = 110 bits (234), Expect = 1e-023
Identities = 40/101 (39%), Positives = 67/101 (66%)
Frame = -2 / -2
Query: 594 LQSALLVSFLLPDPSAWRIHSLFELSCCVFSGVFGSGVTFYLQSWCISVRGPLYSAMFKP 415
+Q ++ +F+ DP AW HS EL +++GV SG+ F +Q WCI GP++ A+++P
Sbjct: 786 IQFLIIAAFMERDPQAWIFHSGGELFTILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQP 607
Query: 414 LCTVITTVFAAAVLREELHVGSLLGAIAVIAGLYVVLWGKA 292
+ T++ + A+ L EE ++G ++GA +I GLY+VLWGK+
Sbjct: 606 VQTLVVAIMASIALGEEFYLGGIIGAALIIIGLYLVLWGKS 484
>gb|CV251527.1|CV251527 WS0117.B21_F17 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS0117_F17 3', mRNA sequence
Length = 511
Score = 110 bits (234), Expect = 1e-023
Identities = 40/101 (39%), Positives = 67/101 (66%)
Frame = -2 / -1
Query: 594 LQSALLVSFLLPDPSAWRIHSLFELSCCVFSGVFGSGVTFYLQSWCISVRGPLYSAMFKP 415
+Q ++ +F+ DP AW HS EL +++GV SG+ F +Q WCI GP++ A+++P
Sbjct: 508 IQFLIIAAFMERDPQAWIFHSGGELFTILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQP 329
Query: 414 LCTVITTVFAAAVLREELHVGSLLGAIAVIAGLYVVLWGKA 292
+ T++ + A+ L EE ++G ++GA +I GLY+VLWGK+
Sbjct: 328 VQTLVVAIMASIALGEEFYLGGIIGAALIIIGLYLVLWGKS 206
>gb|CV251545.1|CV251545 WS0117.B21_G23 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS0117_G23 3', mRNA sequence
Length = 509
Score = 110 bits (234), Expect = 1e-023
Identities = 40/101 (39%), Positives = 67/101 (66%)
Frame = -2 / -2
Query: 594 LQSALLVSFLLPDPSAWRIHSLFELSCCVFSGVFGSGVTFYLQSWCISVRGPLYSAMFKP 415
+Q ++ +F+ DP AW HS EL +++GV SG+ F +Q WCI GP++ A+++P
Sbjct: 508 IQFLIIAAFMERDPQAWIFHSGGELFTILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQP 329
Query: 414 LCTVITTVFAAAVLREELHVGSLLGAIAVIAGLYVVLWGKA 292
+ T++ + A+ L EE ++G ++GA +I GLY+VLWGK+
Sbjct: 328 VQTLVVAIMASIALGEEFYLGGIIGAALIIIGLYLVLWGKS 206
>gb|CV273865.1|CV273865 WS01712.B21_H01 PTxD-NR-A-8 Populus trichocarpa x Populus deltoides
cDNA clone WS01712_H01 3', mRNA sequence
Length = 920
Score = 109 bits (233), Expect = 2e-023
Identities = 43/116 (37%), Positives = 71/116 (61%)
Frame = -2 / -1
Query: 630 LALSAWMCVLSTLQSALLVSFLLPDPSAWRIHSLFELSCCVFSGVFGSGVTFYLQSWCIS 451
L+L+A +C+ ++ A + + D SAW+I L +SGV SG+ +Y+Q I
Sbjct: 668 LSLTALICMTGMVEGAAVSLVMERDMSAWKIGFDSRLLVAAYSGVVCSGIAYYVQGVVIR 489
Query: 450 VRGPLYSAMFKPLCTVITTVFAAAVLREELHVGSLLGAIAVIAGLYVVLWGKAGDA 283
+GP++ F PLC +IT + VL E+L +GS++GA+ ++ GLY V+WGK+ D+
Sbjct: 488 KKGPVFVTSFSPLCMIITAALGSVVLSEQLRLGSIIGAVVIVFGLYTVVWGKSKDS 321
>gb|DT522942.1|DT522942 WS02038.B21_F16 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02038_F16 3', mRNA sequence
Length = 758
Score = 109 bits (233), Expect = 2e-023
Identities = 42/113 (37%), Positives = 69/113 (61%)
Frame = -2 / -2
Query: 630 LALSAWMCVLSTLQSALLVSFLLPDPSAWRIHSLFELSCCVFSGVFGSGVTFYLQSWCIS 451
L+L+A +CV+ ++ A + + D AW+I L +SGV SG+ +Y+Q I
Sbjct: 724 LSLTALICVMGVVEGAAVSLVMERDMGAWKIGFDSRLLAAAYSGVVCSGIAYYVQGVVIR 545
Query: 450 VRGPLYSAMFKPLCTVITTVFAAAVLREELHVGSLLGAIAVIAGLYVVLWGKA 292
RGP++ F PLC + T + VL E++H+GS++GA+ ++ GLY V+WGK+
Sbjct: 544 ERGPVFVTSFSPLCMITTAALGSLVLAEQIHLGSIIGAVLIVWGLYTVVWGKS 386
>gb|CV249390.1|CV249390 WS01123.B21_P14 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01123_P14 3', mRNA sequence
Length = 716
Score = 109 bits (232), Expect = 3e-023
Identities = 41/115 (35%), Positives = 72/115 (62%)
Frame = -2 / -2
Query: 636 SPLALSAWMCVLSTLQSALLVSFLLPDPSAWRIHSLFELSCCVFSGVFGSGVTFYLQSWC 457
S +A+ +++C+ T+QS+++ +P+AW++ EL ++S V GS VTF + +WC
Sbjct: 688 SEMAMVSFLCLFGTIQSSIVSLIAERNPNAWKLRPDIELISIIYSAVVGSVVTFGVTAWC 509
Query: 456 ISVRGPLYSAMFKPLCTVITTVFAAAVLREELHVGSLLGAIAVIAGLYVVLWGKA 292
I +GP++ A+FKP+ L + LHVGS++GAI ++AG Y V+W ++
Sbjct: 508 IRKKGPVFVAIFKPVGIATAAFLGVIFLGDTLHVGSIVGAIIIVAGFYGVIWAQS 344
>gb|CV259513.1|CV259513 WS02011.B21_I23 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02011_I23 3', mRNA sequence
Length = 741
Score = 109 bits (232), Expect = 3e-023
Identities = 40/100 (40%), Positives = 66/100 (66%)
Frame = -2 / -2
Query: 591 QSALLVSFLLPDPSAWRIHSLFELSCCVFSGVFGSGVTFYLQSWCISVRGPLYSAMFKPL 412
Q ++ +F+ DP AW HS EL +++GV SG+ F +Q WCI GP++ A+++P+
Sbjct: 740 QFLIIAAFMERDPQAWIFHSGGELFTILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPV 561
Query: 411 CTVITTVFAAAVLREELHVGSLLGAIAVIAGLYVVLWGKA 292
T++ + A+ L EE ++G ++GA +I GLY+VLWGK+
Sbjct: 560 QTLVVAIMASIALGEEFYLGGIIGAALIIIGLYLVLWGKS 441
>gb|DT509753.1|DT509753 WS02424.BR_J19 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02424_J19 5', mRNA sequence
Length = 836
Score = 109 bits (232), Expect = 3e-023
Identities = 42/112 (37%), Positives = 70/112 (62%)
Frame = -2 / +3
Query: 618 AWMCVLSTLQSALLVSFLLPDPSAWRIHSLFELSCCVFSGVFGSGVTFYLQSWCISVRGP 439
++ C S LQ + + D AW +HS+ EL ++G+ SG+ F +Q W I RGP
Sbjct: 45 SFTCFFSILQFLAIAGYFERDSQAWHVHSVGELFTIFYAGLVVSGIGFAIQIWVIQRRGP 224
Query: 438 LYSAMFKPLCTVITTVFAAAVLREELHVGSLLGAIAVIAGLYVVLWGKAGDA 283
++ + + PL T++ V A+ L EE ++G ++GA+ +IAGLY+V+WGK+ +A
Sbjct: 225 VFVSGYLPLQTMLVAVMASIALSEEFYLGGMIGAMLIIAGLYLVVWGKSEEA 380
>gb|DT520534.1|DT520534 WS02447.B21_N03 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02447_N03 3', mRNA sequence
Length = 889
Score = 109 bits (232), Expect = 3e-023
Identities = 41/115 (35%), Positives = 72/115 (62%)
Frame = -2 / -1
Query: 636 SPLALSAWMCVLSTLQSALLVSFLLPDPSAWRIHSLFELSCCVFSGVFGSGVTFYLQSWC 457
S +A+ +++C+ T+QS+++ +P+AW++ EL ++S V GS VTF + +WC
Sbjct: 589 SEMAMVSFLCLFGTIQSSIVSLIAERNPNAWKLRPDIELISIIYSAVVGSVVTFGVTAWC 410
Query: 456 ISVRGPLYSAMFKPLCTVITTVFAAAVLREELHVGSLLGAIAVIAGLYVVLWGKA 292
I +GP++ A+FKP+ L + LHVGS++GAI ++AG Y V+W ++
Sbjct: 409 IRKKGPVFVAIFKPVGIATAAFLGVIFLGDTLHVGSIVGAIIIVAGFYGVIWAQS 245
>gb|DT514363.1|DT514363 WS02424.B21_J19 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02424_J19 3', mRNA sequence
Length = 839
Score = 108 bits (231), Expect = 4e-023
Identities = 42/112 (37%), Positives = 70/112 (62%)
Frame = -2 / -3
Query: 618 AWMCVLSTLQSALLVSFLLPDPSAWRIHSLFELSCCVFSGVFGSGVTFYLQSWCISVRGP 439
++ C S LQ + + D AW +HS+ EL ++G+ SG+ F +Q W I RGP
Sbjct: 795 SFTCFFSILQFLAIAGYFERDSQAWHVHSVGELFTXFYAGLVVSGIGFAIQIWVIQRRGP 616
Query: 438 LYSAMFKPLCTVITTVFAAAVLREELHVGSLLGAIAVIAGLYVVLWGKAGDA 283
++ + + PL T++ V A+ L EE ++G ++GA+ +IAGLY+V+WGK+ +A
Sbjct: 615 VFVSGYLPLQTMLVAVMASIALSEEFYLGGMIGAMLIIAGLYLVVWGKSEEA 460
>gb|CV247937.1|CV247937 WS01119.B21_N16 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01119_N16 3', mRNA sequence
Length = 730
Score = 108 bits (230), Expect = 5e-023
Identities = 39/97 (40%), Positives = 65/97 (67%)
Frame = -2 / -3
Query: 582 LLVSFLLPDPSAWRIHSLFELSCCVFSGVFGSGVTFYLQSWCISVRGPLYSAMFKPLCTV 403
++ +F+ DP AW HS EL +++GV SG+ F +Q WCI GP++ A+++P+ T+
Sbjct: 728 IIAAFMERDPQAWIFHSGGELFTILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTL 549
Query: 402 ITTVFAAAVLREELHVGSLLGAIAVIAGLYVVLWGKA 292
+ + A+ L EE ++G ++GA +I GLY+VLWGK+
Sbjct: 548 VVAIMASIALGEEFYLGGIIGAALIIIGLYLVLWGKS 438
>gb|CV268224.1|CV268224 WS0204.B21_O10 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS0204_O10 3', mRNA sequence
Length = 715
Score = 102 bits (218), Expect(2) = 5e-023
Identities = 37/86 (43%), Positives = 60/86 (69%)
Frame = -2 / -2
Query: 549 AWRIHSLFELSCCVFSGVFGSGVTFYLQSWCISVRGPLYSAMFKPLCTVITTVFAAAVLR 370
AW HS EL +++GV SG+ F +Q WCI GP++ A+++P+ T++ + A+ L
Sbjct: 711 AWIFHSGGELFTILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASIALG 532
Query: 369 EELHVGSLLGAIAVIAGLYVVLWGKA 292
EE ++G ++GA+ +IAGLY+VLWGK+
Sbjct: 531 EEFYLGGIIGAVLIIAGLYLVLWGKS 454
Score = 24.9 bits (48), Expect(2) = 5e-023
Identities = 9/25 (36%), Positives = 12/25 (48%)
Frame = -3 / -3
Query: 317 CTWCCGAKRATPTRAGWSQSTTRPI 243
CTW GAK + W + RP+
Sbjct: 479 CTWSYGAKAKKRSSWHWKRLQFRPL 405
>gb|CV275204.1|CV275204 WS0175.B21_L11 PTxD-NR-A-8 Populus trichocarpa x Populus deltoides
cDNA clone WS0175_L11 3', mRNA sequence
Length = 759
Score = 107 bits (228), Expect = 1e-022
Identities = 42/115 (36%), Positives = 67/115 (58%)
Frame = -2 / -3
Query: 639 TSPLALSAWMCVLSTLQSALLVSFLLPDPSAWRIHSLFELSCCVFSGVFGSGVTFYLQSW 460
++ L+L+ +C L TLQS + + PSAW I L ++G+ S + +Y+Q
Sbjct: 664 SAQLSLTTIVCFLGTLQSIAVTFVMEHKPSAWTIGWDMNLLAAAYAGIVSSSIAYYVQGL 485
Query: 459 CISVRGPLYSAMFKPLCTVITTVFAAAVLREELHVGSLLGAIAVIAGLYVVLWGK 295
+ RGP++ F PL +I + + +L E ++VG +LGAI ++AGLY VLWGK
Sbjct: 484 VMQKRGPVFVTAFSPLMMIIVAIMGSFILAENIYVGGILGAILIVAGLYAVLWGK 320
>gb|CV273595.1|CV273595 WS01711.B21_I14 PTxD-NR-A-8 Populus trichocarpa x Populus deltoides
cDNA clone WS01711_I14 3', mRNA sequence
Length = 756
Score = 106 bits (227), Expect = 1e-022
Identities = 42/112 (37%), Positives = 65/112 (58%)
Frame = -2 / -1
Query: 630 LALSAWMCVLSTLQSALLVSFLLPDPSAWRIHSLFELSCCVFSGVFGSGVTFYLQSWCIS 451
L+L+ +C L TLQS + + PSAW I L ++G+ S + +Y+Q +
Sbjct: 753 LSLTTIVCFLGTLQSIAVTFVMEHKPSAWTIGWDMNLLAAAYAGIVSSSIAYYVQGLVMQ 574
Query: 450 VRGPLYSAMFKPLCTVITTVFAAAVLREELHVGSLLGAIAVIAGLYVVLWGK 295
RGP++ F PL +I + + +L E ++VG +LGAI ++AGLY VLWGK
Sbjct: 573 KRGPVFVTAFSPLMMIIVAIMGSFILAENIYVGGILGAILIVAGLYAVLWGK 418
>gb|CK095550.1|CK095550 UA13CPE10.3pR Populus dormant cambium cDNA library Populus tremula
cDNA clone UA13CPE10 3', mRNA sequence
Length = 664
Score = 105 bits (224), Expect = 3e-022
Identities = 43/141 (30%), Positives = 79/141 (56%)
Frame = -2 / -1
Query: 621 SAWMCVLSTLQSALLVSFLLPDPSAWRIHSLFELSCCVFSGVFGSGVTFYLQSWCISVRG 442
+A M L +QSA+L + + W + + E+ +++G+ GSG + SWC+ RG
Sbjct: 613 TALMSFLGAVQSAILSLSIERNLPMWILRTKLEILSVLYAGIIGSGFCYAGLSWCVKRRG 434
Query: 441 PLYSAMFKPLCTVITTVFAAAVLREELHVGSLLGAIAVIAGLYVVLWGKAGDANKGGVEP 262
P++++ F P + +F ++L E + +GS+LG++ VI GLY++LWGK+ +A G +
Sbjct: 433 PVFTSAFTPFTQIFAAMFDFSILHEPIFLGSVLGSVLVILGLYILLWGKSIEAGDCGEKQ 254
Query: 261 EHHSADLEKXSSARSDPNSTA 199
H + + E P +T+
Sbjct: 253 AHLAGEEEHRDGEAQMPATTS 191
>gb|CK096539.1|CK096539 UB18CPD05.3pR Populus active cambium cDNA library Populus tremula
cDNA clone UB18CPD05 3', mRNA sequence
Length = 823
Score = 104 bits (222), Expect = 7e-022
Identities = 39/113 (34%), Positives = 68/113 (60%)
Frame = -2 / -2
Query: 630 LALSAWMCVLSTLQSALLVSFLLPDPSAWRIHSLFELSCCVFSGVFGSGVTFYLQSWCIS 451
L+L+ +CV+ ++ A + + D +AW+I L +SGV SG+ +Y+Q +
Sbjct: 657 LSLTTLICVMGVVEGAAVSLVMERDMAAWKIGFDSRLLAAAYSGVVCSGIAYYVQGVVMR 478
Query: 450 VRGPLYSAMFKPLCTVITTVFAAAVLREELHVGSLLGAIAVIAGLYVVLWGKA 292
RGP++ F PLC + T + L E++H+GS++GA+ ++ GLY V+WGK+
Sbjct: 477 ERGPVFVTSFSPLCMITTAALGSIFLAEQIHLGSIIGAVLIVWGLYTVVWGKS 319
>gb|CV249238.1|CV249238 WS01123.B21_H12 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01123_H12 3', mRNA sequence
Length = 739
Score = 104 bits (222), Expect = 7e-022
Identities = 38/89 (42%), Positives = 60/89 (67%)
Frame = -2 / -3
Query: 558 DPSAWRIHSLFELSCCVFSGVFGSGVTFYLQSWCISVRGPLYSAMFKPLCTVITTVFAAA 379
DP AW HS EL +++GV SG+ F +Q WCI GP++ A+++P+ T++ + A+
Sbjct: 728 DPQAWIFHSGGELFTILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASI 549
Query: 378 VLREELHVGSLLGAIAVIAGLYVVLWGKA 292
L EE ++G ++GA +I GLY+VLWGK+
Sbjct: 548 ALGEEFYLGGIIGAALIIIGLYLVLWGKS 462
>gb|CV281693.1|CV281693 WS0182.B21_J19 PTxD-IL-N-A-9 Populus trichocarpa x Populus
deltoides cDNA clone WS0182_J19 3', mRNA sequence
Length = 854
Score = 101 bits (215), Expect = 6e-021
Identities = 43/114 (37%), Positives = 63/114 (55%)
Frame = -2 / -2
Query: 636 SPLALSAWMCVLSTLQSALLVSFLLPDPSAWRIHSLFELSCCVFSGVFGSGVTFYLQSWC 457
S L C LST+Q + DP W + L + G+ +GVTFYLQ+W
Sbjct: 652 SKLLFITLQCFLSTIQLFAIAVAAERDPREWELGWNVRLLAVAYCGIVVTGVTFYLQAWV 473
Query: 456 ISVRGPLYSAMFKPLCTVITTVFAAAVLREELHVGSLLGAIAVIAGLYVVLWGK 295
I +GP++ AM P V T +F++ +L E + +GS+LG + ++ GLY VLWGK
Sbjct: 472 IEKKGPVFLAMSTPFTLVFTMIFSSILLCETITLGSVLGGLMLVGGLYSVLWGK 311
Database: Populus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:49 PM
Number of letters in database: 203,408,664
Number of sequences in database: 369,679
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 330,045,744
Number of Sequences: 369679
Number of extensions: 4314978
Number of successful extensions: 41572
Number of sequences better than 1.0e-020: 53
length of database: 67,802,888
effective HSP length: 52
effective length of database: 48,579,580
effective search space used: 10201711800
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)