TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3510875.2.1
(707 letters)
Database: Populus_nucl_with_EST.fasta
369,679 sequences; 203,408,664 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CA924513.1|CA924513 MTU7CL.P6.E11 Aspen leaf cDNA Librar... 121 4e-039
gb|AJ773247.1|AJ773247 AJ773247 Populus euphratica leaf 3-6... 123 5e-039
gb|CA924528.1|CA924528 MTU7CL.P6.G10 Aspen leaf cDNA Librar... 119 9e-039
gb|DT514987.1|DT514987 WS02426.B21_F07 PTxD-ICC-N-A-14 Popu... 122 5e-038
gb|DT511499.1|DT511499 WS02416.B21_K03 PTxD-ICC-N-A-14 Popu... 122 5e-038
gb|DT506831.1|DT506831 WS02416.BR_K03 PTxD-ICC-N-A-14 Popul... 122 5e-038
gb|DT510358.1|DT510358 WS02426.BR_F07 PTxD-ICC-N-A-14 Popul... 122 5e-038
gb|CV262197.1|CV262197 WS02018.B21_O10 PTxN-IB-N-A-11 Popul... 123 4e-037
gb|CN549966.1|CN549966 GQ0243.B3_C02 GQ024 Populus trichoca... 110 2e-034
gb|DN502705.1|DN502705 X032A02.5pR Populus wood cDNA librar... 124 5e-033
gb|CV258008.1|CV258008 WS0248.B21_E10 PTxD-ICC-N-A-14 Popul... 123 1e-032
gb|DT518500.1|DT518500 WS02438.B21_F12 PTxD-ICC-N-A-14 Popu... 123 1e-032
gb|BU895854.1|BU895854 X032A02 Populus wood cDNA library Po... 122 2e-032
gb|CV273763.1|CV273763 WS01712.B21_B10 PTxD-NR-A-8 Populus ... 121 2e-032
gb|CV234540.1|CV234540 WS01215.B21.1_E10 PT-GT-FL-A-3 Popul... 120 4e-032
gb|DT480883.1|DT480883 WS02530.BR_D15 PT-MB-N-A-15 Populus ... 120 4e-032
gb|DT486169.1|DT486169 WS02530.B21_D15 PT-MB-N-A-15 Populus... 120 4e-032
gb|CV245789.1|CV245789 WS0259.B21_G06 PT-MB-N-A-15 Populus ... 120 4e-032
gb|CV243558.1|CV243558 WS0252.B21_D10 PT-MB-N-A-15 Populus ... 120 4e-032
gb|CV253151.1|CV253151 WS0221.B21_A12 PTxD-ICC-A-12 Populus... 120 4e-032
gb|CN549638.1|CN549638 GQ0242.B3_P20 GQ024 Populus trichoca... 120 4e-032
gb|CV239848.1|CV239848 WS0233.B21_K12 PT-MB-A-13 Populus tr... 120 4e-032
gb|DT486994.1|DT486994 WS02532.B21_H24 PT-MB-N-A-15 Populus... 120 4e-032
gb|CV259409.1|CV259409 WS02011.B21_E13 PTxN-IB-N-A-11 Popul... 120 4e-032
gb|DT478872.1|DT478872 WS02524.BR_A19 PT-MB-N-A-15 Populus ... 120 4e-032
gb|DT492173.1|DT492173 WS02549.C21_N17 PT-MB-N-A-15 Populus... 120 4e-032
gb|CV231359.1|CV231359 WS0194.B21_E22 PT-DX-N-A-10 Populus ... 120 4e-032
gb|BU878912.1|BU878912 V053D04 Populus flower cDNA library ... 120 4e-032
gb|CV239536.1|CV239536 WS0232.B21_L15 PT-MB-A-13 Populus tr... 120 4e-032
gb|CV272702.1|CV272702 WS0158.B21_H07 PTxN-IB-A-6 Populus t... 120 6e-032
gb|BU882625.1|BU882625 UM80TB12 Populus flower cDNA library... 119 8e-032
gb|CV226761.1|CV226761 WS0165.B21_D10 PT-DX-A-7 Populus tri... 119 2e-031
gb|CV226275.1|CV226275 WS0163.B21_M18 PT-DX-A-7 Populus tri... 120 8e-031
gb|DN486294.1|DN486294 P014G07.3pR Populus petioles cDNA li... 114 1e-030
gb|BU888953.1|BU888953 P014G07 Populus petioles cDNA librar... 114 1e-030
gb|DN495851.1|DN495851 P014G07.5pR Populus petioles cDNA li... 114 1e-030
gb|AJ774712.1|AJ774712 AJ774712 Populus euphratica shoot 3-... 117 2e-030
gb|DT516903.1|DT516903 WS02432.B21_L22 PTxD-ICC-N-A-14 Popu... 122 3e-030
gb|DT483078.1|DT483078 WS02521.B21_J12 PT-MB-N-A-15 Populus... 122 3e-030
gb|DT514797.1|DT514797 WS02425.B21_M24 PTxD-ICC-N-A-14 Popu... 122 3e-030
gb|DT510857.1|DT510857 WS02427.BR_N17 PTxD-ICC-N-A-14 Popul... 122 3e-030
gb|DT517096.1|DT517096 WS02433.B21_E19 PTxD-ICC-N-A-14 Popu... 122 3e-030
gb|DT510178.1|DT510178 WS02425.BR_M24 PTxD-ICC-N-A-14 Popul... 122 3e-030
gb|DT508118.1|DT508118 WS02420.BR_B20 PTxD-ICC-N-A-14 Popul... 122 3e-030
gb|DT512737.1|DT512737 WS02420.B21_B20 PTxD-ICC-N-A-14 Popu... 122 3e-030
gb|CV256484.1|CV256484 WS0243.B21_P16 PTxD-ICC-N-A-14 Popul... 122 3e-030
gb|DT496046.1|DT496046 WS01122.BR_E01 PT-P-FL-A-2 Populus t... 122 3e-030
gb|DT478008.1|DT478008 WS02521.BR_J12 PT-MB-N-A-15 Populus ... 122 3e-030
gb|BU892875.1|BU892875 P070E11 Populus petioles cDNA librar... 122 3e-030
gb|DN494791.1|DN494791 M127A10.5pR Populus female catkins c... 122 3e-030
gb|DT498331.1|DT498331 WS0115.BR_A19 PT-P-FL-A-2 Populus tr... 122 3e-030
gb|CV248874.1|CV248874 WS01122.B21_E01 PT-P-FL-A-2 Populus ... 122 3e-030
gb|BU869184.1|BU869184 M127A10 Populus flower cDNA library ... 122 3e-030
gb|BU879790.1|BU879790 UM37TE04 Populus flower cDNA library... 122 3e-030
gb|DT488095.1|DT488095 WS02535.B21_H24 PT-MB-N-A-15 Populus... 121 4e-030
gb|CV230414.1|CV230414 WS01916.B21_H11 PT-DX-N-A-10 Populus... 121 4e-030
gb|CV251260.1|CV251260 WS0116.B21_G06 PT-P-FL-A-2 Populus t... 121 4e-030
gb|CV252840.1|CV252840 PX0019.B21.1_C23 PT-X-FL-A-1 Populus... 121 4e-030
gb|CV252932.1|CV252932 PX0019.B21.1_I21 PT-X-FL-A-1 Populus... 121 4e-030
gb|BU886325.1|BU886325 R043G11 Populus root cDNA library Po... 122 4e-030
gb|DT498798.1|DT498798 WS0116.BR_G06 PT-P-FL-A-2 Populus tr... 121 4e-030
gb|CK096033.1|CK096033 UA42BPC05.3pR Populus dormant cambiu... 130 1e-029
gb|DN489981.1|DN489981 T097G04.3pR Populus shoot meristem c... 115 2e-029
gb|CV256225.1|CV256225 WS0243.B21_E12 PTxD-ICC-N-A-14 Popul... 118 3e-029
gb|CV267163.1|CV267163 WS02030.B21_P23 PTxN-IB-N-A-11 Popul... 128 4e-029
gb|DT494449.1|DT494449 WS01118.BR.1_H08 PT-P-FL-A-2 Populus... 117 5e-029
gb|CF237334.1|CF237334 Ptajxtjxt4H12H1216 Poplar cDNA libra... 119 5e-029
gb|CV247524.1|CV247524 WS01118.B21_H08 PT-P-FL-A-2 Populus ... 117 5e-029
gb|CV237083.1|CV237083 WS01226.B21.1_M02 PT-GT-FL-A-3 Popul... 117 5e-029
gb|CX658695.1|CX658695 PO01021B02 Poplar SC cDNA library Po... 119 5e-029
gb|DT472606.1|DT472606 WS01226.BR_M02 PT-GT-FL-A-3 Populus ... 117 5e-029
gb|BU879777.1|BU879777 UM37TC12 Populus flower cDNA library... 120 1e-028
gb|DN500902.1|DN500902 UM37TC12.5pR Populus female catkins ... 120 1e-028
gb|DN490897.1|DN490897 UM37TC12.3pR Populus female catkins ... 120 1e-028
gb|CV231564.1|CV231564 WS0194.B21_O17 PT-DX-N-A-10 Populus ... 126 1e-028
gb|CV248063.1|CV248063 WS0112.B21_E19 PT-P-FL-A-2 Populus t... 126 1e-028
gb|CV263844.1|CV263844 WS02022.B21_O24 PTxN-IB-N-A-11 Popul... 126 1e-028
gb|CV269025.1|CV269025 WS0207.B21_C01 PTxN-IB-N-A-11 Populu... 126 1e-028
gb|CA825646.1|CA825646 R63H08 two-month-old roots from clon... 115 2e-028
gb|BU882845.1|BU882845 UM83TA07 Populus flower cDNA library... 115 2e-028
gb|DT495070.1|DT495070 WS0112.BR_E19 PT-P-FL-A-2 Populus tr... 123 9e-028
gb|CF233419.1|CF233419 PtaJXO0023B4B0404 Poplar cDNA librar... 114 1e-027
gb|BU880411.1|BU880411 UM45TF11 Populus flower cDNA library... 113 1e-027
gb|BU883422.1|BU883422 UM90TE05 Populus flower cDNA library... 105 1e-027
gb|CA821842.1|CA821842 RSH08C10 two-month-old roots from cl... 112 1e-027
gb|DN485328.1|DN485328 M127A10.3pR Populus female catkins c... 122 2e-027
gb|CV231482.1|CV231482 WS0194.B21_K22 PT-DX-N-A-10 Populus ... 122 3e-027
gb|CV231605.1|CV231605 WS0195.B21_A12 PT-DX-N-A-10 Populus ... 122 3e-027
gb|CV250863.1|CV250863 WS0115.B21_A19 PT-P-FL-A-2 Populus t... 122 3e-027
gb|CV232949.1|CV232949 WS0199.B21_C20 PT-DX-N-A-10 Populus ... 121 6e-027
gb|CV227604.1|CV227604 WS0167.B21_K15 PT-DX-A-7 Populus tri... 120 8e-027
gb|CV252051.1|CV252051 WS0119.B21_D08 PT-P-FL-A-2 Populus t... 120 8e-027
gb|BU819318.1|BU819318 UA42BPC05 Populus tremula cambium cD... 120 1e-026
gb|DN485321.1|DN485321 M126G03.3pR Populus female catkins c... 102 2e-026
gb|DN485251.1|DN485251 M122C11.3pR Populus female catkins c... 102 2e-026
gb|DN494712.1|DN494712 M122C11.5pR Populus female catkins c... 102 2e-026
gb|DN494784.1|DN494784 M126G03.5pR Populus female catkins c... 102 2e-026
gb|DN492693.1|DN492693 X032A02.3pR Populus wood cDNA librar... 106 2e-025
gb|CF228696.1|CF228696 PtaXM0016C4C0406 Poplar cDNA library... 114 5e-025
gb|DN499907.1|DN499907 T097G04.5pR Populus shoot meristem c... 97 7e-024
gb|BU824424.1|BU824424 UB64CPB10 Populus tremula cambium cD... 78 7e-024
gb|DT500680.1|DT500680 PX0019.BR.1_I21 PT-X-FL-A-1 Populus ... 97 6e-023
gb|BU882070.1|BU882070 UM72TC03 Populus flower cDNA library... 97 6e-023
gb|CV255816.1|CV255816 WS0242.B21_C05 PTxD-ICC-N-A-14 Popul... 106 2e-022
gb|CK318342.1|CK318342 B9P08c01 Populus stem seasonal libra... 105 4e-022
gb|CK105857.1|CK105857 UA42BPC05.5pR Populus dormant cambiu... 61 7e-022
>gb|CA924513.1|CA924513 MTU7CL.P6.E11 Aspen leaf cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 658
Score = 121 bits (258), Expect(2) = 4e-039
Identities = 53/89 (59%), Positives = 61/89 (68%)
Frame = -2 / -2
Query: 535 VGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGRNEVLSDVREMSIVGGSGKF 356
VGRAQG Y A Q LM +NFVFT G++NGSTLSILGRN VLS VR+M +VGGSG F
Sbjct: 417 VGRAQGIYASASQSELSFLMALNFVFTEGKYNGSTLSILGRNSVLSGVRKMPVVGGSGLF 238
Query: 355 RMARGYVQAHTIDSGATSGTTVVQYTVNV 269
R ARGY QA T +G +V+Y V V
Sbjct: 237 RFARGYAQAKTHGLDFKTGDAIVEYNVYV 151
Score = 60.6 bits (126), Expect(2) = 4e-039
Identities = 23/43 (53%), Positives = 29/43 (67%)
Frame = -2 / -2
Query: 685 YFHDVVAGTNPTAVRIAQXAXXXXXXXNFGAVVAIDDPLTTGP 557
YFHD+V+G+NPTAV +AQ A +FG V +DDPLT P
Sbjct: 564 YFHDIVSGSNPTAVPVAQAAMTKNSLSSFGLVTMMDDPLTVKP 436
>gb|AJ773247.1|AJ773247 AJ773247 Populus euphratica leaf 3-6 months Populus euphratica cDNA
clone P0000200007D01F1, mRNA sequence
Length = 717
Score = 123 bits (264), Expect(2) = 5e-039
Identities = 53/89 (59%), Positives = 61/89 (68%)
Frame = -2 / +1
Query: 535 VGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGRNEVLSDVREMSIVGGSGKF 356
VGRAQG Y A Q LM +NFVFT G++NGSTLSILGRN V S +REM +VGGSG F
Sbjct: 322 VGRAQGIYASASQSELSFLMALNFVFTEGKYNGSTLSILGRNSVFSGIREMPVVGGSGLF 501
Query: 355 RMARGYVQAHTIDSGATSGTTVVQYTVNV 269
R ARGY QA T D +G +V+Y V V
Sbjct: 502 RFARGYAQAKTHDLDFKTGDAIVEYNVYV 588
Score = 57.4 bits (119), Expect(2) = 5e-039
Identities = 21/43 (48%), Positives = 29/43 (67%)
Frame = -2 / +1
Query: 685 YFHDVVAGTNPTAVRIAQXAXXXXXXXNFGAVVAIDDPLTTGP 557
YFHD+V+G+NPTAV +A+ + +FG V +DDPLT P
Sbjct: 175 YFHDIVSGSNPTAVPVARASMTKNSFSSFGMVTMMDDPLTVKP 303
>gb|CA924528.1|CA924528 MTU7CL.P6.G10 Aspen leaf cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 567
Score = 119 bits (255), Expect(2) = 9e-039
Identities = 52/89 (58%), Positives = 61/89 (68%)
Frame = -2 / -1
Query: 535 VGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGRNEVLSDVREMSIVGGSGKF 356
VGRAQG Y A Q LM +NFVFT G++NGSTLSILGRN VLS V++M +VGGSG F
Sbjct: 417 VGRAQGIYASASQSELSFLMALNFVFTEGKYNGSTLSILGRNSVLSGVKKMPVVGGSGLF 238
Query: 355 RMARGYVQAHTIDSGATSGTTVVQYTVNV 269
R ARGY QA T +G +V+Y V V
Sbjct: 237 RFARGYAQAKTHGLDFKTGDAIVEYNVYV 151
Score = 60.6 bits (126), Expect(2) = 9e-039
Identities = 23/43 (53%), Positives = 29/43 (67%)
Frame = -2 / -1
Query: 685 YFHDVVAGTNPTAVRIAQXAXXXXXXXNFGAVVAIDDPLTTGP 557
YFHD+V+G+NPTAV +AQ A +FG V +DDPLT P
Sbjct: 564 YFHDIVSGSNPTAVPVAQAAMTKNSLSSFGLVTMMDDPLTVKP 436
>gb|DT514987.1|DT514987 WS02426.B21_F07 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02426_F07 3', mRNA sequence
Length = 896
Score = 122 bits (261), Expect(2) = 5e-038
Identities = 53/89 (59%), Positives = 62/89 (69%)
Frame = -2 / -3
Query: 535 VGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGRNEVLSDVREMSIVGGSGKF 356
VGRAQG Y A Q LM +NFVFT G++NGSTLSILGRN V S +REM IVGGSG F
Sbjct: 555 VGRAQGIYASASQSELCFLMALNFVFTEGKYNGSTLSILGRNNVFSGIREMPIVGGSGLF 376
Query: 355 RMARGYVQAHTIDSGATSGTTVVQYTVNV 269
R ARGY QA+T + +G +V+Y V V
Sbjct: 375 RFARGYAQANTHEIDFKTGNAIVEYNVYV 289
Score = 55.6 bits (115), Expect(2) = 5e-038
Identities = 21/43 (48%), Positives = 26/43 (60%)
Frame = -2 / -3
Query: 685 YFHDVVAGTNPTAVRIAQXAXXXXXXXNFGAVVAIDDPLTTGP 557
YFHD+V G NPTAV + + A +FG V +DDPLT P
Sbjct: 702 YFHDIVGGKNPTAVPVVRAAITKKSFSSFGLVTMMDDPLTVKP 574
>gb|DT511499.1|DT511499 WS02416.B21_K03 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02416_K03 3', mRNA sequence
Length = 879
Score = 122 bits (261), Expect(2) = 5e-038
Identities = 53/89 (59%), Positives = 62/89 (69%)
Frame = -2 / -1
Query: 535 VGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGRNEVLSDVREMSIVGGSGKF 356
VGRAQG Y A Q LM +NFVFT G++NGSTLSILGRN V S +REM IVGGSG F
Sbjct: 561 VGRAQGIYASASQSELCFLMALNFVFTEGKYNGSTLSILGRNNVFSGIREMPIVGGSGLF 382
Query: 355 RMARGYVQAHTIDSGATSGTTVVQYTVNV 269
R ARGY QA+T + +G +V+Y V V
Sbjct: 381 RFARGYAQANTHEIDFKTGNAIVEYNVYV 295
Score = 55.6 bits (115), Expect(2) = 5e-038
Identities = 21/43 (48%), Positives = 26/43 (60%)
Frame = -2 / -1
Query: 685 YFHDVVAGTNPTAVRIAQXAXXXXXXXNFGAVVAIDDPLTTGP 557
YFHD+V G NPTAV + + A +FG V +DDPLT P
Sbjct: 708 YFHDIVGGKNPTAVPVVRAAITKKSFSSFGLVTMMDDPLTVKP 580
>gb|DT506831.1|DT506831 WS02416.BR_K03 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02416_K03 5', mRNA sequence
Length = 866
Score = 122 bits (261), Expect(2) = 5e-038
Identities = 53/89 (59%), Positives = 62/89 (69%)
Frame = -2 / +1
Query: 535 VGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGRNEVLSDVREMSIVGGSGKF 356
VGRAQG Y A Q LM +NFVFT G++NGSTLSILGRN V S +REM IVGGSG F
Sbjct: 319 VGRAQGIYASASQSELCFLMALNFVFTEGKYNGSTLSILGRNNVFSGIREMPIVGGSGLF 498
Query: 355 RMARGYVQAHTIDSGATSGTTVVQYTVNV 269
R ARGY QA+T + +G +V+Y V V
Sbjct: 499 RFARGYAQANTHEIDFKTGNAIVEYNVYV 585
Score = 55.6 bits (115), Expect(2) = 5e-038
Identities = 21/43 (48%), Positives = 26/43 (60%)
Frame = -2 / +1
Query: 685 YFHDVVAGTNPTAVRIAQXAXXXXXXXNFGAVVAIDDPLTTGP 557
YFHD+V G NPTAV + + A +FG V +DDPLT P
Sbjct: 172 YFHDIVGGKNPTAVPVVRAAITKKSFSSFGLVTMMDDPLTVKP 300
>gb|DT510358.1|DT510358 WS02426.BR_F07 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02426_F07 5', mRNA sequence
Length = 830
Score = 122 bits (261), Expect(2) = 5e-038
Identities = 53/89 (59%), Positives = 62/89 (69%)
Frame = -2 / +3
Query: 535 VGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGRNEVLSDVREMSIVGGSGKF 356
VGRAQG Y A Q LM +NFVFT G++NGSTLSILGRN V S +REM IVGGSG F
Sbjct: 357 VGRAQGIYASASQSELCFLMALNFVFTEGKYNGSTLSILGRNNVFSGIREMPIVGGSGLF 536
Query: 355 RMARGYVQAHTIDSGATSGTTVVQYTVNV 269
R ARGY QA+T + +G +V+Y V V
Sbjct: 537 RFARGYAQANTHEIDFKTGNAIVEYNVYV 623
Score = 55.6 bits (115), Expect(2) = 5e-038
Identities = 21/43 (48%), Positives = 26/43 (60%)
Frame = -2 / +3
Query: 685 YFHDVVAGTNPTAVRIAQXAXXXXXXXNFGAVVAIDDPLTTGP 557
YFHD+V G NPTAV + + A +FG V +DDPLT P
Sbjct: 210 YFHDIVGGKNPTAVPVVRAAITKKSFSSFGLVTMMDDPLTVKP 338
>gb|CV262197.1|CV262197 WS02018.B21_O10 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02018_O10 3', mRNA sequence
Length = 804
Score = 123 bits (263), Expect(2) = 4e-037
Identities = 53/89 (59%), Positives = 62/89 (69%)
Frame = -2 / -3
Query: 535 VGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGRNEVLSDVREMSIVGGSGKF 356
VGRAQG Y A Q LM +NFVFT G++NGSTLSILGRN V S +REM IVGGSG F
Sbjct: 658 VGRAQGIYASASQSELSFLMALNFVFTEGKYNGSTLSILGRNNVFSGIREMPIVGGSGLF 479
Query: 355 RMARGYVQAHTIDSGATSGTTVVQYTVNV 269
R ARGY QA+T + +G +V+Y V V
Sbjct: 478 RFARGYAQANTHEIDFKTGDAIVEYNVYV 392
Score = 51.5 bits (106), Expect(2) = 4e-037
Identities = 20/42 (47%), Positives = 25/42 (59%)
Frame = -2 / -3
Query: 682 FHDVVAGTNPTAVRIAQXAXXXXXXXNFGAVVAIDDPLTTGP 557
FHD+V G NPTAV + + A +FG V +DDPLT P
Sbjct: 802 FHDIVGGKNPTAVPVVRPAITKKSFSSFGLVTMMDDPLTVKP 677
>gb|CN549966.1|CN549966 GQ0243.B3_C02 GQ024 Populus trichocarpa x Populus deltoides cDNA
clone GQ0243_C02 5', mRNA sequence
Length = 667
Score = 110 bits (235), Expect(2) = 2e-034
Identities = 48/83 (57%), Positives = 55/83 (66%)
Frame = -2 / +2
Query: 535 VGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGRNEVLSDVREMSIVGGSGKF 356
VGRAQG Y A Q LM +NFVFT G++NGSTLSILGRN V S +REM IVGGSG F
Sbjct: 365 VGRAQGIYASASQSELSFLMALNFVFTEGKYNGSTLSILGRNNVFSGIREMPIVGGSGLF 544
Query: 355 RMARGYVQAHTIDSGATSGTTVV 287
R A Y QA+T +G +V
Sbjct: 545 RFAXXYAQANTHXXDFKTGNAIV 613
Score = 55.6 bits (115), Expect(2) = 2e-034
Identities = 21/43 (48%), Positives = 26/43 (60%)
Frame = -2 / +2
Query: 685 YFHDVVAGTNPTAVRIAQXAXXXXXXXNFGAVVAIDDPLTTGP 557
YFHD+V G NPTAV + + A +FG V +DDPLT P
Sbjct: 218 YFHDIVGGRNPTAVPVVRAAITKKSFSSFGLVTMMDDPLTVKP 346
>gb|DN502705.1|DN502705 X032A02.5pR Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA clone X032A02 5', mRNA sequence
Length = 698
Score = 124 bits (265), Expect(2) = 5e-033
Identities = 54/89 (60%), Positives = 61/89 (68%)
Frame = -2 / +2
Query: 535 VGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGRNEVLSDVREMSIVGGSGKF 356
VGRAQG Y A Q LM +NFVFT G++NGSTLSILGRN V S VREM +VGGSG F
Sbjct: 284 VGRAQGIYASASQSELSFLMALNFVFTEGKYNGSTLSILGRNSVFSGVREMPVVGGSGLF 463
Query: 355 RMARGYVQAHTIDSGATSGTTVVQYTVNV 269
R ARGY QA T D +G +V+Y V V
Sbjct: 464 RFARGYAQAKTHDLDFKTGDAIVEYNVYV 550
Score = 36.8 bits (74), Expect(2) = 5e-033
Identities = 12/18 (66%), Positives = 17/18 (94%)
Frame = -2 / +1
Query: 685 YFHDVVAGTNPTAVRIAQ 632
YFHD+V+G+NPTAV +A+
Sbjct: 214 YFHDIVSGSNPTAVPVAR 267
>gb|CV258008.1|CV258008 WS0248.B21_E10 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS0248_E10 3', mRNA sequence
Length = 729
Score = 123 bits (264), Expect(3) = 1e-032
Identities = 53/89 (59%), Positives = 63/89 (70%)
Frame = -2 / -3
Query: 535 VGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGRNEVLSDVREMSIVGGSGKF 356
+GRAQG Y A Q+ LLM MNFVF G++NGST+SILGRN V S VREM ++GGSG F
Sbjct: 430 IGRAQGFYGSAGQEETALLMAMNFVFLQGKYNGSTISILGRNHVFSKVREMPVIGGSGLF 251
Query: 355 RMARGYVQAHTIDSGATSGTTVVQYTVNV 269
R ARGY QA+T A +G VV+Y V V
Sbjct: 250 RFARGYAQANTYSFNAKTGDAVVEYNVYV 164
Score = 29.5 bits (58), Expect(3) = 1e-032
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -2 / -3
Query: 703 LTTSEVYFHDVVAGTNPTAVRI 638
LT VY+HD+ + NPTA+ I
Sbjct: 592 LTHFRVYWHDIYSAPNPTAMPI 527
Score = 24.4 bits (47), Expect(3) = 1e-032
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = -2 / -3
Query: 601 FGAVVAIDDPLTTGP 557
FG++ IDDPLT P
Sbjct: 493 FGSLSMIDDPLTEKP 449
>gb|DT518500.1|DT518500 WS02438.B21_F12 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02438_F12 3', mRNA sequence
Length = 662
Score = 123 bits (264), Expect(3) = 1e-032
Identities = 53/89 (59%), Positives = 63/89 (70%)
Frame = -2 / -1
Query: 535 VGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGRNEVLSDVREMSIVGGSGKF 356
+GRAQG Y A Q+ LLM MNFVF G++NGST+SILGRN V S VREM ++GGSG F
Sbjct: 356 IGRAQGFYGSAGQEEAALLMAMNFVFLQGKYNGSTISILGRNHVFSKVREMPVIGGSGLF 177
Query: 355 RMARGYVQAHTIDSGATSGTTVVQYTVNV 269
R ARGY QA+T A +G VV+Y V V
Sbjct: 176 RFARGYAQANTYSFNAKTGDAVVEYNVYV 90
Score = 29.5 bits (58), Expect(3) = 1e-032
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -2 / -1
Query: 703 LTTSEVYFHDVVAGTNPTAVRI 638
LT VY+HD+ + NPTA+ I
Sbjct: 518 LTHFRVYWHDIYSAPNPTAMPI 453
Score = 24.4 bits (47), Expect(3) = 1e-032
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = -2 / -1
Query: 601 FGAVVAIDDPLTTGP 557
FG++ IDDPLT P
Sbjct: 419 FGSLSMIDDPLTEKP 375
>gb|BU895854.1|BU895854 X032A02 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 520
Score = 122 bits (261), Expect(2) = 2e-032
Identities = 53/89 (59%), Positives = 60/89 (67%)
Frame = -2 / +3
Query: 535 VGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGRNEVLSDVREMSIVGGSGKF 356
VGRAQG Y A Q LM +NFVFT G++NGSTLSILGRN V S VREM + GGSG F
Sbjct: 246 VGRAQGIYASASQSELSFLMALNFVFTEGKYNGSTLSILGRNSVFSGVREMPVAGGSGLF 425
Query: 355 RMARGYVQAHTIDSGATSGTTVVQYTVNV 269
R ARGY QA T D +G +V+Y V V
Sbjct: 426 RFARGYAQAKTHDLDFKTGDAIVEYNVYV 512
Score = 36.8 bits (74), Expect(2) = 2e-032
Identities = 12/18 (66%), Positives = 17/18 (94%)
Frame = -2 / +2
Query: 685 YFHDVVAGTNPTAVRIAQ 632
YFHD+V+G+NPTAV +A+
Sbjct: 176 YFHDIVSGSNPTAVPVAR 229
>gb|CV273763.1|CV273763 WS01712.B21_B10 PTxD-NR-A-8 Populus trichocarpa x Populus deltoides
cDNA clone WS01712_B10 3', mRNA sequence
Length = 775
Score = 121 bits (259), Expect(3) = 2e-032
Identities = 53/89 (59%), Positives = 62/89 (69%)
Frame = -2 / -3
Query: 535 VGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGRNEVLSDVREMSIVGGSGKF 356
+GRAQG Y A Q+ LLM MNFVF G++NGST+SILGRN+V S VREM ++GGSG F
Sbjct: 452 IGRAQGFYGSAGQEETALLMAMNFVFLQGKYNGSTISILGRNQVFSKVREMPVIGGSGLF 273
Query: 355 RMARGYVQAHTIDSGATSGTTVVQYTVNV 269
R ARGY QA T SG VV+Y V V
Sbjct: 272 RFARGYAQASTHSFDLKSGDAVVEYNVYV 186
Score = 29.9 bits (59), Expect(3) = 2e-032
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = -2 / -3
Query: 703 LTTSEVYFHDVVAGTNPTAVRIAQ 632
LT VY+HD+ + NPTA+ I +
Sbjct: 614 LTHFRVYWHDIYSAPNPTAMPIVR 543
Score = 25.4 bits (49), Expect(3) = 2e-032
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = -2 / -3
Query: 601 FGAVVAIDDPLTTGP 557
FG++ IDDPLT P
Sbjct: 515 FGSISMIDDPLTEKP 471
>gb|CV234540.1|CV234540 WS01215.B21.1_E10 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01215_E10 3', mRNA sequence
Length = 783
Score = 120 bits (257), Expect(3) = 4e-032
Identities = 53/89 (59%), Positives = 61/89 (68%)
Frame = -2 / -1
Query: 535 VGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGRNEVLSDVREMSIVGGSGKF 356
+GRAQG Y A Q+ LLM MNFVF G++NGST+SILGRN V S VREM ++GGSG F
Sbjct: 462 IGRAQGFYGSAGQEETALLMAMNFVFLQGKYNGSTISILGRNHVFSKVREMPVIGGSGLF 283
Query: 355 RMARGYVQAHTIDSGATSGTTVVQYTVNV 269
R ARGY QA T SG VV+Y V V
Sbjct: 282 RFARGYAQASTHSFDLKSGDAVVEYNVYV 196
Score = 29.9 bits (59), Expect(3) = 4e-032
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = -2 / -1
Query: 703 LTTSEVYFHDVVAGTNPTAVRIAQ 632
LT VY+HD+ + NPTA+ I +
Sbjct: 624 LTHFRVYWHDIYSAPNPTAMPIVR 553
Score = 25.4 bits (49), Expect(3) = 4e-032
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = -2 / -1
Query: 601 FGAVVAIDDPLTTGP 557
FG++ IDDPLT P
Sbjct: 525 FGSISMIDDPLTEKP 481
>gb|DT480883.1|DT480883 WS02530.BR_D15 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02530_D15 5', mRNA sequence
Length = 769
Score = 120 bits (257), Expect(3) = 4e-032
Identities = 53/89 (59%), Positives = 61/89 (68%)
Frame = -2 / +1
Query: 535 VGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGRNEVLSDVREMSIVGGSGKF 356
+GRAQG Y A Q+ LLM MNFVF G++NGST+SILGRN V S VREM ++GGSG F
Sbjct: 322 IGRAQGFYGSAGQEETALLMAMNFVFLQGKYNGSTISILGRNHVFSKVREMPVIGGSGLF 501
Query: 355 RMARGYVQAHTIDSGATSGTTVVQYTVNV 269
R ARGY QA T SG VV+Y V V
Sbjct: 502 RFARGYAQASTHSFDLKSGDAVVEYNVYV 588
Score = 29.9 bits (59), Expect(3) = 4e-032
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = -2 / +1
Query: 703 LTTSEVYFHDVVAGTNPTAVRIAQ 632
LT VY+HD+ + NPTA+ I +
Sbjct: 160 LTHFRVYWHDIYSAPNPTAMPIVR 231
Score = 25.4 bits (49), Expect(3) = 4e-032
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = -2 / +1
Query: 601 FGAVVAIDDPLTTGP 557
FG++ IDDPLT P
Sbjct: 259 FGSISMIDDPLTEKP 303
>gb|DT486169.1|DT486169 WS02530.B21_D15 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02530_D15 3', mRNA sequence
Length = 768
Score = 120 bits (257), Expect(3) = 4e-032
Identities = 53/89 (59%), Positives = 61/89 (68%)
Frame = -2 / -1
Query: 535 VGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGRNEVLSDVREMSIVGGSGKF 356
+GRAQG Y A Q+ LLM MNFVF G++NGST+SILGRN V S VREM ++GGSG F
Sbjct: 495 IGRAQGFYGSAGQEETALLMAMNFVFLQGKYNGSTISILGRNHVFSKVREMPVIGGSGLF 316
Query: 355 RMARGYVQAHTIDSGATSGTTVVQYTVNV 269
R ARGY QA T SG VV+Y V V
Sbjct: 315 RFARGYAQASTHSFDLKSGDAVVEYNVYV 229
Score = 29.9 bits (59), Expect(3) = 4e-032
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = -2 / -1
Query: 703 LTTSEVYFHDVVAGTNPTAVRIAQ 632
LT VY+HD+ + NPTA+ I +
Sbjct: 657 LTHFRVYWHDIYSAPNPTAMPIVR 586
Score = 25.4 bits (49), Expect(3) = 4e-032
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = -2 / -1
Query: 601 FGAVVAIDDPLTTGP 557
FG++ IDDPLT P
Sbjct: 558 FGSISMIDDPLTEKP 514
>gb|CV245789.1|CV245789 WS0259.B21_G06 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS0259_G06 3', mRNA sequence
Length = 757
Score = 120 bits (257), Expect(3) = 4e-032
Identities = 53/89 (59%), Positives = 61/89 (68%)
Frame = -2 / +2
Query: 535 VGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGRNEVLSDVREMSIVGGSGKF 356
+GRAQG Y A Q+ LLM MNFVF G++NGST+SILGRN V S VREM ++GGSG F
Sbjct: 323 IGRAQGFYGSAGQEETALLMAMNFVFLQGKYNGSTISILGRNHVFSKVREMPVIGGSGLF 502
Query: 355 RMARGYVQAHTIDSGATSGTTVVQYTVNV 269
R ARGY QA T SG VV+Y V V
Sbjct: 503 RFARGYAQASTHSFDLKSGDAVVEYNVYV 589
Score = 29.9 bits (59), Expect(3) = 4e-032
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = -2 / +2
Query: 703 LTTSEVYFHDVVAGTNPTAVRIAQ 632
LT VY+HD+ + NPTA+ I +
Sbjct: 161 LTHFRVYWHDIYSAPNPTAMPIVR 232
Score = 25.4 bits (49), Expect(3) = 4e-032
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = -2 / +2
Query: 601 FGAVVAIDDPLTTGP 557
FG++ IDDPLT P
Sbjct: 260 FGSISMIDDPLTEKP 304
>gb|CV243558.1|CV243558 WS0252.B21_D10 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS0252_D10 3', mRNA sequence
Length = 748
Score = 120 bits (257), Expect(3) = 4e-032
Identities = 53/89 (59%), Positives = 61/89 (68%)
Frame = -2 / -1
Query: 535 VGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGRNEVLSDVREMSIVGGSGKF 356
+GRAQG Y A Q+ LLM MNFVF G++NGST+SILGRN V S VREM ++GGSG F
Sbjct: 448 IGRAQGFYGSAGQEETALLMAMNFVFLQGKYNGSTISILGRNHVFSKVREMPVIGGSGLF 269
Query: 355 RMARGYVQAHTIDSGATSGTTVVQYTVNV 269
R ARGY QA T SG VV+Y V V
Sbjct: 268 RFARGYAQASTHSFDLKSGDAVVEYNVYV 182
Score = 29.9 bits (59), Expect(3) = 4e-032
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = -2 / -1
Query: 703 LTTSEVYFHDVVAGTNPTAVRIAQ 632
LT VY+HD+ + NPTA+ I +
Sbjct: 610 LTHFRVYWHDIYSAPNPTAMPIVR 539
Score = 25.4 bits (49), Expect(3) = 4e-032
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = -2 / -1
Query: 601 FGAVVAIDDPLTTGP 557
FG++ IDDPLT P
Sbjct: 511 FGSISMIDDPLTEKP 467
>gb|CV253151.1|CV253151 WS0221.B21_A12 PTxD-ICC-A-12 Populus trichocarpa x Populus
deltoides cDNA clone WS0221_A12 3', mRNA sequence
Length = 715
Score = 120 bits (257), Expect(3) = 4e-032
Identities = 53/89 (59%), Positives = 61/89 (68%)
Frame = -2 / -3
Query: 535 VGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGRNEVLSDVREMSIVGGSGKF 356
+GRAQG Y A Q+ LLM MNFVF G++NGST+SILGRN V S VREM ++GGSG F
Sbjct: 395 IGRAQGFYGSAGQEETALLMAMNFVFLQGKYNGSTISILGRNHVFSKVREMPVIGGSGLF 216
Query: 355 RMARGYVQAHTIDSGATSGTTVVQYTVNV 269
R ARGY QA T SG VV+Y V V
Sbjct: 215 RFARGYAQASTHSFDLKSGDAVVEYNVYV 129
Score = 29.9 bits (59), Expect(3) = 4e-032
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = -2 / -3
Query: 703 LTTSEVYFHDVVAGTNPTAVRIAQ 632
LT VY+HD+ + NPTA+ I +
Sbjct: 557 LTHFRVYWHDIYSAPNPTAMPIVR 486
Score = 25.4 bits (49), Expect(3) = 4e-032
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = -2 / -3
Query: 601 FGAVVAIDDPLTTGP 557
FG++ IDDPLT P
Sbjct: 458 FGSISMIDDPLTEKP 414
>gb|CN549638.1|CN549638 GQ0242.B3_P20 GQ024 Populus trichocarpa x Populus deltoides cDNA
clone GQ0242_P20 5', mRNA sequence
Length = 702
Score = 120 bits (257), Expect(3) = 4e-032
Identities = 53/89 (59%), Positives = 61/89 (68%)
Frame = -2 / +3
Query: 535 VGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGRNEVLSDVREMSIVGGSGKF 356
+GRAQG Y A Q+ LLM MNFVF G++NGST+SILGRN V S VREM ++GGSG F
Sbjct: 321 IGRAQGFYGSAGQEETALLMAMNFVFLQGKYNGSTISILGRNHVFSKVREMPVIGGSGLF 500
Query: 355 RMARGYVQAHTIDSGATSGTTVVQYTVNV 269
R ARGY QA T SG VV+Y V V
Sbjct: 501 RFARGYAQASTHSFDLKSGDAVVEYNVYV 587
Score = 29.9 bits (59), Expect(3) = 4e-032
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = -2 / +3
Query: 703 LTTSEVYFHDVVAGTNPTAVRIAQ 632
LT VY+HD+ + NPTA+ I +
Sbjct: 159 LTHFRVYWHDIYSAPNPTAMPIVR 230
Score = 25.4 bits (49), Expect(3) = 4e-032
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = -2 / +3
Query: 601 FGAVVAIDDPLTTGP 557
FG++ IDDPLT P
Sbjct: 258 FGSISMIDDPLTEKP 302
>gb|CV239848.1|CV239848 WS0233.B21_K12 PT-MB-A-13 Populus trichocarpa cDNA clone WS0233_K12
3', mRNA sequence
Length = 687
Score = 120 bits (257), Expect(3) = 4e-032
Identities = 53/89 (59%), Positives = 61/89 (68%)
Frame = -2 / -2
Query: 535 VGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGRNEVLSDVREMSIVGGSGKF 356
+GRAQG Y A Q+ LLM MNFVF G++NGST+SILGRN V S VREM ++GGSG F
Sbjct: 467 IGRAQGFYGSAGQEETALLMAMNFVFLQGKYNGSTISILGRNHVFSKVREMPVIGGSGLF 288
Query: 355 RMARGYVQAHTIDSGATSGTTVVQYTVNV 269
R ARGY QA T SG VV+Y V V
Sbjct: 287 RFARGYAQASTHSFDLKSGDAVVEYNVYV 201
Score = 29.9 bits (59), Expect(3) = 4e-032
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = -2 / -2
Query: 703 LTTSEVYFHDVVAGTNPTAVRIAQ 632
LT VY+HD+ + NPTA+ I +
Sbjct: 629 LTHFRVYWHDIYSAPNPTAMPIVR 558
Score = 25.4 bits (49), Expect(3) = 4e-032
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = -2 / -2
Query: 601 FGAVVAIDDPLTTGP 557
FG++ IDDPLT P
Sbjct: 530 FGSISMIDDPLTEKP 486
>gb|DT486994.1|DT486994 WS02532.B21_H24 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02532_H24 3', mRNA sequence
Length = 672
Score = 120 bits (257), Expect(3) = 4e-032
Identities = 53/89 (59%), Positives = 61/89 (68%)
Frame = -2 / -1
Query: 535 VGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGRNEVLSDVREMSIVGGSGKF 356
+GRAQG Y A Q+ LLM MNFVF G++NGST+SILGRN V S VREM ++GGSG F
Sbjct: 447 IGRAQGFYGSAGQEETALLMAMNFVFLQGKYNGSTISILGRNHVFSKVREMPVIGGSGLF 268
Query: 355 RMARGYVQAHTIDSGATSGTTVVQYTVNV 269
R ARGY QA T SG VV+Y V V
Sbjct: 267 RFARGYAQASTHSFDLKSGDAVVEYNVYV 181
Score = 29.9 bits (59), Expect(3) = 4e-032
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = -2 / -1
Query: 703 LTTSEVYFHDVVAGTNPTAVRIAQ 632
LT VY+HD+ + NPTA+ I +
Sbjct: 609 LTHFRVYWHDIYSAPNPTAMPIVR 538
Score = 25.4 bits (49), Expect(3) = 4e-032
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = -2 / -1
Query: 601 FGAVVAIDDPLTTGP 557
FG++ IDDPLT P
Sbjct: 510 FGSISMIDDPLTEKP 466
>gb|CV259409.1|CV259409 WS02011.B21_E13 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02011_E13 3', mRNA sequence
Length = 669
Score = 120 bits (257), Expect(3) = 4e-032
Identities = 53/89 (59%), Positives = 61/89 (68%)
Frame = -2 / -1
Query: 535 VGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGRNEVLSDVREMSIVGGSGKF 356
+GRAQG Y A Q+ LLM MNFVF G++NGST+SILGRN V S VREM ++GGSG F
Sbjct: 447 IGRAQGFYGSAGQEETALLMAMNFVFLQGKYNGSTISILGRNHVFSKVREMPVIGGSGLF 268
Query: 355 RMARGYVQAHTIDSGATSGTTVVQYTVNV 269
R ARGY QA T SG VV+Y V V
Sbjct: 267 RFARGYAQASTHSFDLKSGDAVVEYNVYV 181
Score = 29.9 bits (59), Expect(3) = 4e-032
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = -2 / -1
Query: 703 LTTSEVYFHDVVAGTNPTAVRIAQ 632
LT VY+HD+ + NPTA+ I +
Sbjct: 609 LTHFRVYWHDIYSAPNPTAMPIVR 538
Score = 25.4 bits (49), Expect(3) = 4e-032
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = -2 / -1
Query: 601 FGAVVAIDDPLTTGP 557
FG++ IDDPLT P
Sbjct: 510 FGSISMIDDPLTEKP 466
>gb|DT478872.1|DT478872 WS02524.BR_A19 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02524_A19 5', mRNA sequence
Length = 653
Score = 120 bits (257), Expect(3) = 4e-032
Identities = 53/89 (59%), Positives = 61/89 (68%)
Frame = -2 / +1
Query: 535 VGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGRNEVLSDVREMSIVGGSGKF 356
+GRAQG Y A Q+ LLM MNFVF G++NGST+SILGRN V S VREM ++GGSG F
Sbjct: 226 IGRAQGFYGSAGQEETALLMAMNFVFLQGKYNGSTISILGRNHVFSKVREMPVIGGSGLF 405
Query: 355 RMARGYVQAHTIDSGATSGTTVVQYTVNV 269
R ARGY QA T SG VV+Y V V
Sbjct: 406 RFARGYAQASTHSFDLKSGDAVVEYNVYV 492
Score = 29.9 bits (59), Expect(3) = 4e-032
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = -2 / +1
Query: 703 LTTSEVYFHDVVAGTNPTAVRIAQ 632
LT VY+HD+ + NPTA+ I +
Sbjct: 64 LTHFRVYWHDIYSAPNPTAMPIVR 135
Score = 25.4 bits (49), Expect(3) = 4e-032
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = -2 / +1
Query: 601 FGAVVAIDDPLTTGP 557
FG++ IDDPLT P
Sbjct: 163 FGSISMIDDPLTEKP 207
>gb|DT492173.1|DT492173 WS02549.C21_N17 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02549_N17 3', mRNA sequence
Length = 653
Score = 120 bits (257), Expect(3) = 4e-032
Identities = 53/89 (59%), Positives = 61/89 (68%)
Frame = -2 / -3
Query: 535 VGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGRNEVLSDVREMSIVGGSGKF 356
+GRAQG Y A Q+ LLM MNFVF G++NGST+SILGRN V S VREM ++GGSG F
Sbjct: 447 IGRAQGFYGSAGQEETALLMAMNFVFLQGKYNGSTISILGRNHVFSKVREMPVIGGSGLF 268
Query: 355 RMARGYVQAHTIDSGATSGTTVVQYTVNV 269
R ARGY QA T SG VV+Y V V
Sbjct: 267 RFARGYAQASTHSFDLKSGDAVVEYNVYV 181
Score = 29.9 bits (59), Expect(3) = 4e-032
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = -2 / -3
Query: 703 LTTSEVYFHDVVAGTNPTAVRIAQ 632
LT VY+HD+ + NPTA+ I +
Sbjct: 609 LTHFRVYWHDIYSAPNPTAMPIVR 538
Score = 25.4 bits (49), Expect(3) = 4e-032
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = -2 / -3
Query: 601 FGAVVAIDDPLTTGP 557
FG++ IDDPLT P
Sbjct: 510 FGSISMIDDPLTEKP 466
>gb|CV231359.1|CV231359 WS0194.B21_E22 PT-DX-N-A-10 Populus trichocarpa cDNA clone
WS0194_E22 3', mRNA sequence
Length = 634
Score = 120 bits (257), Expect(3) = 4e-032
Identities = 53/89 (59%), Positives = 61/89 (68%)
Frame = -2 / -1
Query: 535 VGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGRNEVLSDVREMSIVGGSGKF 356
+GRAQG Y A Q+ LLM MNFVF G++NGST+SILGRN V S VREM ++GGSG F
Sbjct: 337 IGRAQGFYGSAGQEETALLMAMNFVFLQGKYNGSTISILGRNHVFSKVREMPVIGGSGLF 158
Query: 355 RMARGYVQAHTIDSGATSGTTVVQYTVNV 269
R ARGY QA T SG VV+Y V V
Sbjct: 157 RFARGYAQASTHSFDLKSGDAVVEYNVYV 71
Score = 29.9 bits (59), Expect(3) = 4e-032
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = -2 / -1
Query: 703 LTTSEVYFHDVVAGTNPTAVRIAQ 632
LT VY+HD+ + NPTA+ I +
Sbjct: 499 LTHFRVYWHDIYSAPNPTAMPIVR 428
Score = 25.4 bits (49), Expect(3) = 4e-032
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = -2 / -1
Query: 601 FGAVVAIDDPLTTGP 557
FG++ IDDPLT P
Sbjct: 400 FGSISMIDDPLTEKP 356
>gb|BU878912.1|BU878912 V053D04 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 631
Score = 120 bits (257), Expect(3) = 4e-032
Identities = 53/89 (59%), Positives = 61/89 (68%)
Frame = -2 / +3
Query: 535 VGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGRNEVLSDVREMSIVGGSGKF 356
+GRAQG Y A Q+ LLM MNFVF G++NGST+SILGRN V S VREM ++GGSG F
Sbjct: 321 IGRAQGFYGSAGQEETALLMAMNFVFLQGKYNGSTISILGRNHVFSKVREMPVIGGSGLF 500
Query: 355 RMARGYVQAHTIDSGATSGTTVVQYTVNV 269
R ARGY QA T SG VV+Y V V
Sbjct: 501 RFARGYAQASTHSFDLKSGDAVVEYNVYV 587
Score = 29.9 bits (59), Expect(3) = 4e-032
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = -2 / +3
Query: 703 LTTSEVYFHDVVAGTNPTAVRIAQ 632
LT VY+HD+ + NPTA+ I +
Sbjct: 159 LTHFRVYWHDIYSAPNPTAMPIVR 230
Score = 25.4 bits (49), Expect(3) = 4e-032
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = -2 / +3
Query: 601 FGAVVAIDDPLTTGP 557
FG++ IDDPLT P
Sbjct: 258 FGSISMIDDPLTEKP 302
>gb|CV239536.1|CV239536 WS0232.B21_L15 PT-MB-A-13 Populus trichocarpa cDNA clone WS0232_L15
3', mRNA sequence
Length = 580
Score = 120 bits (257), Expect(3) = 4e-032
Identities = 53/89 (59%), Positives = 61/89 (68%)
Frame = -2 / -1
Query: 535 VGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGRNEVLSDVREMSIVGGSGKF 356
+GRAQG Y A Q+ LLM MNFVF G++NGST+SILGRN V S VREM ++GGSG F
Sbjct: 355 IGRAQGFYGSAGQEETALLMAMNFVFLQGKYNGSTISILGRNHVFSKVREMPVIGGSGLF 176
Query: 355 RMARGYVQAHTIDSGATSGTTVVQYTVNV 269
R ARGY QA T SG VV+Y V V
Sbjct: 175 RFARGYAQASTHSFDLKSGDAVVEYNVYV 89
Score = 29.9 bits (59), Expect(3) = 4e-032
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = -2 / -1
Query: 703 LTTSEVYFHDVVAGTNPTAVRIAQ 632
LT VY+HD+ + NPTA+ I +
Sbjct: 517 LTHFRVYWHDIYSAPNPTAMPIVR 446
Score = 25.4 bits (49), Expect(3) = 4e-032
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = -2 / -1
Query: 601 FGAVVAIDDPLTTGP 557
FG++ IDDPLT P
Sbjct: 418 FGSISMIDDPLTEKP 374
>gb|CV272702.1|CV272702 WS0158.B21_H07 PTxN-IB-A-6 Populus trichocarpa x Populus nigra cDNA
clone WS0158_H07 3', mRNA sequence
Length = 770
Score = 120 bits (256), Expect(3) = 6e-032
Identities = 53/89 (59%), Positives = 61/89 (68%)
Frame = -2 / -2
Query: 535 VGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGRNEVLSDVREMSIVGGSGKF 356
+GRAQG Y A Q+ LLM MNFVF G++NGST+SILGRN V S VREM ++GGSG F
Sbjct: 448 IGRAQGFYGSAGQEETALLMAMNFVFLQGKYNGSTISILGRNHVFSKVREMPVIGGSGLF 269
Query: 355 RMARGYVQAHTIDSGATSGTTVVQYTVNV 269
R ARGY QA T SG VV+Y V V
Sbjct: 268 RFARGYAQASTHSFDLKSGDAVVEYNVFV 182
Score = 29.9 bits (59), Expect(3) = 6e-032
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = -2 / -2
Query: 703 LTTSEVYFHDVVAGTNPTAVRIAQ 632
LT VY+HD+ + NPTA+ I +
Sbjct: 610 LTHFRVYWHDIYSAPNPTAMPIVR 539
Score = 25.4 bits (49), Expect(3) = 6e-032
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = -2 / -2
Query: 601 FGAVVAIDDPLTTGP 557
FG++ IDDPLT P
Sbjct: 511 FGSISMIDDPLTEKP 467
>gb|BU882625.1|BU882625 UM80TB12 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 596
Score = 119 bits (255), Expect(3) = 8e-032
Identities = 52/87 (59%), Positives = 60/87 (68%)
Frame = -2 / +2
Query: 535 VGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGRNEVLSDVREMSIVGGSGKF 356
+GRAQG Y A Q+ LLM MNFVF G++NGST+SILGRN V S VREM ++GGSG F
Sbjct: 332 IGRAQGFYGSAGQEETALLMAMNFVFLQGKYNGSTISILGRNHVFSKVREMPVIGGSGLF 511
Query: 355 RMARGYVQAHTIDSGATSGTTVVQYTV 275
R ARGY QA T SG VV+Y V
Sbjct: 512 RFARGYAQASTHSFDLKSGDAVVEYNV 592
Score = 29.9 bits (59), Expect(3) = 8e-032
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = -2 / +2
Query: 703 LTTSEVYFHDVVAGTNPTAVRIAQ 632
LT VY+HD+ + NPTA+ I +
Sbjct: 170 LTHFRVYWHDIYSAPNPTAMPIVR 241
Score = 25.4 bits (49), Expect(3) = 8e-032
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = -2 / +2
Query: 601 FGAVVAIDDPLTTGP 557
FG++ IDDPLT P
Sbjct: 269 FGSISMIDDPLTEKP 313
>gb|CV226761.1|CV226761 WS0165.B21_D10 PT-DX-A-7 Populus trichocarpa cDNA clone WS0165_D10
3', mRNA sequence
Length = 799
Score = 119 bits (255), Expect(2) = 2e-031
Identities = 48/72 (66%), Positives = 58/72 (80%)
Frame = -2 / -1
Query: 535 VGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGRNEVLSDVREMSIVGGSGKF 356
VG+AQG Y A Q F LLMVMNF FT G++NGS++SILGRN++L+DVREM IVGGSG F
Sbjct: 502 VGKAQGLYALASQNDFCLLMVMNFAFTEGKYNGSSISILGRNQILNDVREMPIVGGSGLF 323
Query: 355 RMARGYVQAHTI 320
R+A GY AHT+
Sbjct: 322 RLAHGYALAHTV 287
Score = 36.3 bits (73), Expect(2) = 2e-031
Identities = 12/17 (70%), Positives = 16/17 (94%)
Frame = -2 / -1
Query: 685 YFHDVVAGTNPTAVRIA 635
YFHD+V+G +PTA+RIA
Sbjct: 634 YFHDIVSGKHPTAIRIA 584
>gb|CV226275.1|CV226275 WS0163.B21_M18 PT-DX-A-7 Populus trichocarpa cDNA clone WS0163_M18
3', mRNA sequence
Length = 776
Score = 120 bits (256), Expect(2) = 8e-031
Identities = 54/89 (60%), Positives = 60/89 (67%)
Frame = -2 / -2
Query: 535 VGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGRNEVLSDVREMSIVGGSGKF 356
VGRAQG Y FA Q GLLMV+NF F G +NGS LSIL R+ VL +VREM IVGGSG F
Sbjct: 499 VGRAQGVYAFASQHDAGLLMVLNFAFLEGTYNGSALSILSRSPVLDNVREMPIVGGSGLF 320
Query: 355 RMARGYVQAHTIDSGATSGTTVVQYTVNV 269
R ARGY + TI S S VV+Y V V
Sbjct: 319 RFARGYSLSKTISSSQKSRNVVVEYNVTV 233
Score = 33.6 bits (67), Expect(2) = 8e-031
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = -2 / -2
Query: 703 LTTSEVYFHDVVAGTNPTAVRIA 635
+T YFHD+ +G NPT +RIA
Sbjct: 658 MTRLRFYFHDIPSGKNPTNMRIA 590
>gb|DN486294.1|DN486294 P014G07.3pR Populus petioles cDNA library Populus tremula cDNA
clone P014G07 3', mRNA sequence
Length = 711
Score = 114 bits (244), Expect(2) = 1e-030
Identities = 46/72 (63%), Positives = 57/72 (79%)
Frame = -2 / -3
Query: 535 VGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGRNEVLSDVREMSIVGGSGKF 356
VG+AQG Y A Q LMVM+FVFT G++NGS++SILGRN++L+DVREM IVGGSG F
Sbjct: 388 VGKAQGLYALASQNDICFLMVMDFVFTEGKYNGSSISILGRNQILNDVREMPIVGGSGLF 209
Query: 355 RMARGYVQAHTI 320
R+A GY AHT+
Sbjct: 208 RLAHGYALAHTV 173
Score = 38.6 bits (78), Expect(2) = 1e-030
Identities = 13/17 (76%), Positives = 16/17 (94%)
Frame = -2 / -3
Query: 685 YFHDVVAGTNPTAVRIA 635
YFHD+V+G NPTA+RIA
Sbjct: 520 YFHDIVSGKNPTAIRIA 470
>gb|BU888953.1|BU888953 P014G07 Populus petioles cDNA library Populus tremula cDNA 5 prime,
mRNA sequence
Length = 659
Score = 114 bits (244), Expect(2) = 1e-030
Identities = 46/72 (63%), Positives = 57/72 (79%)
Frame = -2 / +3
Query: 535 VGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGRNEVLSDVREMSIVGGSGKF 356
VG+AQG Y A Q LMVM+FVFT G++NGS++SILGRN++L+DVREM IVGGSG F
Sbjct: 336 VGKAQGLYALASQNDICFLMVMDFVFTEGKYNGSSISILGRNQILNDVREMPIVGGSGLF 515
Query: 355 RMARGYVQAHTI 320
R+A GY AHT+
Sbjct: 516 RLAHGYALAHTV 551
Score = 38.6 bits (78), Expect(2) = 1e-030
Identities = 13/17 (76%), Positives = 16/17 (94%)
Frame = -2 / +3
Query: 685 YFHDVVAGTNPTAVRIA 635
YFHD+V+G NPTA+RIA
Sbjct: 204 YFHDIVSGKNPTAIRIA 254
>gb|DN495851.1|DN495851 P014G07.5pR Populus petioles cDNA library Populus tremula cDNA
clone P014G07 5', mRNA sequence
Length = 639
Score = 114 bits (244), Expect(2) = 1e-030
Identities = 46/72 (63%), Positives = 57/72 (79%)
Frame = -2 / +1
Query: 535 VGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGRNEVLSDVREMSIVGGSGKF 356
VG+AQG Y A Q LMVM+FVFT G++NGS++SILGRN++L+DVREM IVGGSG F
Sbjct: 313 VGKAQGLYALASQNDICFLMVMDFVFTEGKYNGSSISILGRNQILNDVREMPIVGGSGLF 492
Query: 355 RMARGYVQAHTI 320
R+A GY AHT+
Sbjct: 493 RLAHGYALAHTV 528
Score = 38.6 bits (78), Expect(2) = 1e-030
Identities = 13/17 (76%), Positives = 16/17 (94%)
Frame = -2 / +1
Query: 685 YFHDVVAGTNPTAVRIA 635
YFHD+V+G NPTA+RIA
Sbjct: 181 YFHDIVSGKNPTAIRIA 231
>gb|AJ774712.1|AJ774712 AJ774712 Populus euphratica shoot 3-6 months Populus euphratica
cDNA clone P0000300023D12F1, mRNA sequence
Length = 636
Score = 117 bits (250), Expect(3) = 2e-030
Identities = 52/89 (58%), Positives = 60/89 (67%)
Frame = -2 / +2
Query: 535 VGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGRNEVLSDVREMSIVGGSGKF 356
+GRAQG Y A Q+ LLM MNFVF G++NGST+SILGRN V S VREM ++GGSG F
Sbjct: 302 IGRAQGFYGSAGQEETALLMAMNFVFLQGKYNGSTISILGRNGVFSKVREMPVIGGSGLF 481
Query: 355 RMARGYVQAHTIDSGATSGTTVVQYTVNV 269
R ARGY A T SG VV+Y V V
Sbjct: 482 RFARGYAHASTHSYDLKSGDAVVEYNVYV 568
Score = 28.1 bits (55), Expect(3) = 2e-030
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = -2 / +2
Query: 703 LTTSEVYFHDVVAGTNPTAVRIAQ 632
L+ VY+HD+ + NPTA+ I +
Sbjct: 140 LSHFRVYWHDIYSAPNPTAMPIVR 211
Score = 24.4 bits (47), Expect(3) = 2e-030
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = -2 / +2
Query: 601 FGAVVAIDDPLTTGP 557
FG++ IDDPLT P
Sbjct: 239 FGSMSMIDDPLTEKP 283
>gb|DT516903.1|DT516903 WS02432.B21_L22 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02432_L22 3', mRNA sequence
Length = 886
Score = 122 bits (260), Expect(2) = 3e-030
Identities = 52/89 (58%), Positives = 62/89 (69%)
Frame = -2 / -3
Query: 535 VGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGRNEVLSDVREMSIVGGSGKF 356
VG+AQG Y A QQ GLLM MNF F G++NGST+++LGRNEV S VREM ++GGSG F
Sbjct: 533 VGKAQGFYAQASQQDLGLLMAMNFAFIEGKYNGSTITVLGRNEVFSTVREMPVIGGSGLF 354
Query: 355 RMARGYVQAHTIDSGATSGTTVVQYTVNV 269
R ARGYVQA T +G V+Y V V
Sbjct: 353 RFARGYVQARTHMVDLKTGDATVEYNVYV 267
Score = 29.9 bits (59), Expect(2) = 3e-030
Identities = 8/22 (36%), Positives = 18/22 (81%)
Frame = -2 / -3
Query: 703 LTTSEVYFHDVVAGTNPTAVRI 638
L+ +VY+HD++ G NP+++++
Sbjct: 692 LSHFKVYWHDILTGPNPSSIQV 627
>gb|DT483078.1|DT483078 WS02521.B21_J12 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02521_J12 3', mRNA sequence
Length = 875
Score = 122 bits (260), Expect(2) = 3e-030
Identities = 52/89 (58%), Positives = 62/89 (69%)
Frame = -2 / -2
Query: 535 VGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGRNEVLSDVREMSIVGGSGKF 356
VG+AQG Y A QQ GLLM MNF F G++NGST+++LGRNEV S VREM ++GGSG F
Sbjct: 517 VGKAQGFYAQASQQDLGLLMAMNFAFIEGKYNGSTITVLGRNEVFSTVREMPVIGGSGLF 338
Query: 355 RMARGYVQAHTIDSGATSGTTVVQYTVNV 269
R ARGYVQA T +G V+Y V V
Sbjct: 337 RFARGYVQARTHMVDLKTGDATVEYNVYV 251
Score = 29.9 bits (59), Expect(2) = 3e-030
Identities = 8/22 (36%), Positives = 18/22 (81%)
Frame = -2 / -2
Query: 703 LTTSEVYFHDVVAGTNPTAVRI 638
L+ +VY+HD++ G NP+++++
Sbjct: 676 LSHFKVYWHDILTGPNPSSIQV 611
>gb|DT514797.1|DT514797 WS02425.B21_M24 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02425_M24 3', mRNA sequence
Length = 872
Score = 122 bits (260), Expect(2) = 3e-030
Identities = 52/89 (58%), Positives = 62/89 (69%)
Frame = -2 / -1
Query: 535 VGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGRNEVLSDVREMSIVGGSGKF 356
VG+AQG Y A QQ GLLM MNF F G++NGST+++LGRNEV S VREM ++GGSG F
Sbjct: 530 VGKAQGFYAQASQQDLGLLMAMNFAFIEGKYNGSTITVLGRNEVFSTVREMPVIGGSGLF 351
Query: 355 RMARGYVQAHTIDSGATSGTTVVQYTVNV 269
R ARGYVQA T +G V+Y V V
Sbjct: 350 RFARGYVQARTHMVDLKTGDATVEYNVYV 264
Score = 29.9 bits (59), Expect(2) = 3e-030
Identities = 8/22 (36%), Positives = 18/22 (81%)
Frame = -2 / -1
Query: 703 LTTSEVYFHDVVAGTNPTAVRI 638
L+ +VY+HD++ G NP+++++
Sbjct: 689 LSHFKVYWHDILTGPNPSSIQV 624
>gb|DT510857.1|DT510857 WS02427.BR_N17 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02427_N17 5', mRNA sequence
Length = 858
Score = 122 bits (260), Expect(2) = 3e-030
Identities = 52/89 (58%), Positives = 62/89 (69%)
Frame = -2 / +3
Query: 535 VGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGRNEVLSDVREMSIVGGSGKF 356
VG+AQG Y A QQ GLLM MNF F G++NGST+++LGRNEV S VREM ++GGSG F
Sbjct: 372 VGKAQGFYAQASQQDLGLLMAMNFAFIEGKYNGSTITVLGRNEVFSTVREMPVIGGSGLF 551
Query: 355 RMARGYVQAHTIDSGATSGTTVVQYTVNV 269
R ARGYVQA T +G V+Y V V
Sbjct: 552 RFARGYVQARTHMVDLKTGDATVEYNVYV 638
Score = 29.9 bits (59), Expect(2) = 3e-030
Identities = 8/22 (36%), Positives = 18/22 (81%)
Frame = -2 / +3
Query: 703 LTTSEVYFHDVVAGTNPTAVRI 638
L+ +VY+HD++ G NP+++++
Sbjct: 213 LSHFKVYWHDILTGPNPSSIQV 278
>gb|DT517096.1|DT517096 WS02433.B21_E19 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02433_E19 3', mRNA sequence
Length = 850
Score = 122 bits (260), Expect(2) = 3e-030
Identities = 52/89 (58%), Positives = 62/89 (69%)
Frame = -2 / -2
Query: 535 VGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGRNEVLSDVREMSIVGGSGKF 356
VG+AQG Y A QQ GLLM MNF F G++NGST+++LGRNEV S VREM ++GGSG F
Sbjct: 471 VGKAQGFYAQASQQDLGLLMAMNFAFIEGKYNGSTITVLGRNEVFSTVREMPVIGGSGLF 292
Query: 355 RMARGYVQAHTIDSGATSGTTVVQYTVNV 269
R ARGYVQA T +G V+Y V V
Sbjct: 291 RFARGYVQARTHMVDLKTGDATVEYNVYV 205
Score = 29.9 bits (59), Expect(2) = 3e-030
Identities = 8/22 (36%), Positives = 18/22 (81%)
Frame = -2 / -2
Query: 703 LTTSEVYFHDVVAGTNPTAVRI 638
L+ +VY+HD++ G NP+++++
Sbjct: 630 LSHFKVYWHDILTGPNPSSIQV 565
>gb|DT510178.1|DT510178 WS02425.BR_M24 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02425_M24 5', mRNA sequence
Length = 848
Score = 122 bits (260), Expect(2) = 3e-030
Identities = 52/89 (58%), Positives = 62/89 (69%)
Frame = -2 / +1
Query: 535 VGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGRNEVLSDVREMSIVGGSGKF 356
VG+AQG Y A QQ GLLM MNF F G++NGST+++LGRNEV S VREM ++GGSG F
Sbjct: 352 VGKAQGFYAQASQQDLGLLMAMNFAFIEGKYNGSTITVLGRNEVFSTVREMPVIGGSGLF 531
Query: 355 RMARGYVQAHTIDSGATSGTTVVQYTVNV 269
R ARGYVQA T +G V+Y V V
Sbjct: 532 RFARGYVQARTHMVDLKTGDATVEYNVYV 618
Score = 29.9 bits (59), Expect(2) = 3e-030
Identities = 8/22 (36%), Positives = 18/22 (81%)
Frame = -2 / +1
Query: 703 LTTSEVYFHDVVAGTNPTAVRI 638
L+ +VY+HD++ G NP+++++
Sbjct: 193 LSHFKVYWHDILTGPNPSSIQV 258
>gb|DT508118.1|DT508118 WS02420.BR_B20 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02420_B20 5', mRNA sequence
Length = 834
Score = 122 bits (260), Expect(2) = 3e-030
Identities = 52/89 (58%), Positives = 62/89 (69%)
Frame = -2 / +1
Query: 535 VGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGRNEVLSDVREMSIVGGSGKF 356
VG+AQG Y A QQ GLLM MNF F G++NGST+++LGRNEV S VREM ++GGSG F
Sbjct: 361 VGKAQGFYAQASQQDLGLLMAMNFAFIEGKYNGSTITVLGRNEVFSTVREMPVIGGSGLF 540
Query: 355 RMARGYVQAHTIDSGATSGTTVVQYTVNV 269
R ARGYVQA T +G V+Y V V
Sbjct: 541 RFARGYVQARTHMVDLKTGDATVEYNVYV 627
Score = 29.9 bits (59), Expect(2) = 3e-030
Identities = 8/22 (36%), Positives = 18/22 (81%)
Frame = -2 / +1
Query: 703 LTTSEVYFHDVVAGTNPTAVRI 638
L+ +VY+HD++ G NP+++++
Sbjct: 202 LSHFKVYWHDILTGPNPSSIQV 267
>gb|DT512737.1|DT512737 WS02420.B21_B20 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02420_B20 3', mRNA sequence
Length = 834
Score = 122 bits (260), Expect(2) = 3e-030
Identities = 52/89 (58%), Positives = 62/89 (69%)
Frame = -2 / -1
Query: 535 VGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGRNEVLSDVREMSIVGGSGKF 356
VG+AQG Y A QQ GLLM MNF F G++NGST+++LGRNEV S VREM ++GGSG F
Sbjct: 474 VGKAQGFYAQASQQDLGLLMAMNFAFIEGKYNGSTITVLGRNEVFSTVREMPVIGGSGLF 295
Query: 355 RMARGYVQAHTIDSGATSGTTVVQYTVNV 269
R ARGYVQA T +G V+Y V V
Sbjct: 294 RFARGYVQARTHMVDLKTGDATVEYNVYV 208
Score = 29.9 bits (59), Expect(2) = 3e-030
Identities = 8/22 (36%), Positives = 18/22 (81%)
Frame = -2 / -1
Query: 703 LTTSEVYFHDVVAGTNPTAVRI 638
L+ +VY+HD++ G NP+++++
Sbjct: 633 LSHFKVYWHDILTGPNPSSIQV 568
>gb|CV256484.1|CV256484 WS0243.B21_P16 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS0243_P16 3', mRNA sequence
Length = 811
Score = 122 bits (260), Expect(2) = 3e-030
Identities = 52/89 (58%), Positives = 62/89 (69%)
Frame = -2 / -2
Query: 535 VGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGRNEVLSDVREMSIVGGSGKF 356
VG+AQG Y A QQ GLLM MNF F G++NGST+++LGRNEV S VREM ++GGSG F
Sbjct: 465 VGKAQGFYAQASQQDLGLLMAMNFAFIEGKYNGSTITVLGRNEVFSTVREMPVIGGSGLF 286
Query: 355 RMARGYVQAHTIDSGATSGTTVVQYTVNV 269
R ARGYVQA T +G V+Y V V
Sbjct: 285 RFARGYVQARTHMVDLKTGDATVEYNVYV 199
Score = 29.9 bits (59), Expect(2) = 3e-030
Identities = 8/22 (36%), Positives = 18/22 (81%)
Frame = -2 / -2
Query: 703 LTTSEVYFHDVVAGTNPTAVRI 638
L+ +VY+HD++ G NP+++++
Sbjct: 624 LSHFKVYWHDILTGPNPSSIQV 559
>gb|DT496046.1|DT496046 WS01122.BR_E01 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01122_E01 5', mRNA sequence
Length = 805
Score = 122 bits (260), Expect(2) = 3e-030
Identities = 52/89 (58%), Positives = 62/89 (69%)
Frame = -2 / +3
Query: 535 VGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGRNEVLSDVREMSIVGGSGKF 356
VG+AQG Y A QQ GLLM MNF F G++NGST+++LGRNEV S VREM ++GGSG F
Sbjct: 291 VGKAQGFYAQASQQDLGLLMAMNFAFIEGKYNGSTITVLGRNEVFSTVREMPVIGGSGLF 470
Query: 355 RMARGYVQAHTIDSGATSGTTVVQYTVNV 269
R ARGYVQA T +G V+Y V V
Sbjct: 471 RFARGYVQARTHMVDLKTGDATVEYNVYV 557
Score = 29.9 bits (59), Expect(2) = 3e-030
Identities = 8/22 (36%), Positives = 18/22 (81%)
Frame = -2 / +3
Query: 703 LTTSEVYFHDVVAGTNPTAVRI 638
L+ +VY+HD++ G NP+++++
Sbjct: 132 LSHFKVYWHDILTGPNPSSIQV 197
>gb|DT478008.1|DT478008 WS02521.BR_J12 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02521_J12 5', mRNA sequence
Length = 798
Score = 122 bits (260), Expect(2) = 3e-030
Identities = 52/89 (58%), Positives = 62/89 (69%)
Frame = -2 / +2
Query: 535 VGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGRNEVLSDVREMSIVGGSGKF 356
VG+AQG Y A QQ GLLM MNF F G++NGST+++LGRNEV S VREM ++GGSG F
Sbjct: 359 VGKAQGFYAQASQQDLGLLMAMNFAFIEGKYNGSTITVLGRNEVFSTVREMPVIGGSGLF 538
Query: 355 RMARGYVQAHTIDSGATSGTTVVQYTVNV 269
R ARGYVQA T +G V+Y V V
Sbjct: 539 RFARGYVQARTHMVDLKTGDATVEYNVYV 625
Score = 29.9 bits (59), Expect(2) = 3e-030
Identities = 8/22 (36%), Positives = 18/22 (81%)
Frame = -2 / +2
Query: 703 LTTSEVYFHDVVAGTNPTAVRI 638
L+ +VY+HD++ G NP+++++
Sbjct: 200 LSHFKVYWHDILTGPNPSSIQV 265
>gb|BU892875.1|BU892875 P070E11 Populus petioles cDNA library Populus tremula cDNA 5 prime,
mRNA sequence
Length = 713
Score = 122 bits (262), Expect(2) = 3e-030
Identities = 53/89 (59%), Positives = 62/89 (69%)
Frame = -2 / +3
Query: 535 VGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGRNEVLSDVREMSIVGGSGKF 356
VG+AQG Y A QQ GLLM MNF F G++NGSTL++LGRNEV S VREM ++GGSG F
Sbjct: 372 VGKAQGFYAQASQQDLGLLMAMNFAFIEGKYNGSTLTVLGRNEVFSTVREMPVIGGSGLF 551
Query: 355 RMARGYVQAHTIDSGATSGTTVVQYTVNV 269
R ARGYVQA T +G V+Y V V
Sbjct: 552 RFARGYVQARTHMVDLKTGDATVEYNVYV 638
Score = 29.0 bits (57), Expect(2) = 3e-030
Identities = 8/22 (36%), Positives = 18/22 (81%)
Frame = -2 / +3
Query: 703 LTTSEVYFHDVVAGTNPTAVRI 638
L+ ++Y+HD++ G NP++V++
Sbjct: 213 LSHFKLYWHDILTGPNPSSVQV 278
>gb|DN494791.1|DN494791 M127A10.5pR Populus female catkins cDNA library Populus trichocarpa
cDNA clone M127A10 5', mRNA sequence
Length = 694
Score = 122 bits (260), Expect(2) = 3e-030
Identities = 52/89 (58%), Positives = 62/89 (69%)
Frame = -2 / +1
Query: 535 VGRAQGTYTFADQQTFGLLMVMNFVFTAGEHNGSTLSILGRNEVLSDVREMSIVGGSGKF 356
VG+AQG Y A QQ GLLM MNF F G++NGST+++LGRNEV S VREM ++GGSG F
Sbjct: 211 VGKAQGFYAQASQQDLGLLMAMNFAFIEGKYNGSTITVLGRNEVFSTVREMPVIGGSGLF 390
Query: 355 RMARGYVQAHTIDSGATSGTTVVQYTVNV 269
R ARGYVQA T +G V+Y V V
Sbjct: 391 RFARGYVQARTHMVDLKTGDATVEYNVYV 477
Score = 29.9 bits (59), Expect(2) = 3e-030
Identities = 8/22 (36%), Positives = 18/22 (81%)
Frame = -2 / +1
Query: 703 LTTSEVYFHDVVAGTNPTAVRI 638
L+ +VY+HD++ G NP+++++
Sbjct: 52 LSHFKVYWHDILTGPNPSSIQV 117
Database: Populus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:49 PM
Number of letters in database: 203,408,664
Number of sequences in database: 369,679
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 246,563,108
Number of Sequences: 369679
Number of extensions: 3316602
Number of successful extensions: 107811
Number of sequences better than 1.0e-020: 115
length of database: 67,802,888
effective HSP length: 52
effective length of database: 48,579,580
effective search space used: 8890063140
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)