TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3336914.2.1
(1448 letters)
Database: Populus_nucl_with_EST.fasta
369,679 sequences; 203,408,664 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|DN502705.1|DN502705 X032A02.5pR Populus wood cDNA librar... 123 3e-031
gb|CV226275.1|CV226275 WS0163.B21_M18 PT-DX-A-7 Populus tri... 116 8e-031
gb|BU895854.1|BU895854 X032A02 Populus wood cDNA library Po... 122 1e-030
gb|BU886325.1|BU886325 R043G11 Populus root cDNA library Po... 119 2e-030
gb|DN489981.1|DN489981 T097G04.3pR Populus shoot meristem c... 111 4e-030
gb|DT516903.1|DT516903 WS02432.B21_L22 PTxD-ICC-N-A-14 Popu... 118 5e-030
gb|DT483078.1|DT483078 WS02521.B21_J12 PT-MB-N-A-15 Populus... 118 5e-030
gb|DT514797.1|DT514797 WS02425.B21_M24 PTxD-ICC-N-A-14 Popu... 118 5e-030
gb|DT510857.1|DT510857 WS02427.BR_N17 PTxD-ICC-N-A-14 Popul... 118 5e-030
gb|DT517096.1|DT517096 WS02433.B21_E19 PTxD-ICC-N-A-14 Popu... 118 5e-030
gb|DT510178.1|DT510178 WS02425.BR_M24 PTxD-ICC-N-A-14 Popul... 118 5e-030
gb|DT508118.1|DT508118 WS02420.BR_B20 PTxD-ICC-N-A-14 Popul... 118 5e-030
gb|DT512737.1|DT512737 WS02420.B21_B20 PTxD-ICC-N-A-14 Popu... 118 5e-030
gb|CV256484.1|CV256484 WS0243.B21_P16 PTxD-ICC-N-A-14 Popul... 118 5e-030
gb|DT496046.1|DT496046 WS01122.BR_E01 PT-P-FL-A-2 Populus t... 118 5e-030
gb|DT478008.1|DT478008 WS02521.BR_J12 PT-MB-N-A-15 Populus ... 118 5e-030
gb|DN494791.1|DN494791 M127A10.5pR Populus female catkins c... 118 5e-030
gb|DT498331.1|DT498331 WS0115.BR_A19 PT-P-FL-A-2 Populus tr... 118 5e-030
gb|BU869184.1|BU869184 M127A10 Populus flower cDNA library ... 118 5e-030
gb|CV248874.1|CV248874 WS01122.B21_E01 PT-P-FL-A-2 Populus ... 118 5e-030
gb|BU879790.1|BU879790 UM37TE04 Populus flower cDNA library... 118 5e-030
gb|BU892875.1|BU892875 P070E11 Populus petioles cDNA librar... 119 9e-030
gb|CV226761.1|CV226761 WS0165.B21_D10 PT-DX-A-7 Populus tri... 111 1e-029
gb|CV234540.1|CV234540 WS01215.B21.1_E10 PT-GT-FL-A-3 Popul... 119 2e-029
gb|DT480883.1|DT480883 WS02530.BR_D15 PT-MB-N-A-15 Populus ... 119 2e-029
gb|DT486169.1|DT486169 WS02530.B21_D15 PT-MB-N-A-15 Populus... 119 2e-029
gb|CV245789.1|CV245789 WS0259.B21_G06 PT-MB-N-A-15 Populus ... 119 2e-029
gb|CV243558.1|CV243558 WS0252.B21_D10 PT-MB-N-A-15 Populus ... 119 2e-029
gb|CV253151.1|CV253151 WS0221.B21_A12 PTxD-ICC-A-12 Populus... 119 2e-029
gb|CN549638.1|CN549638 GQ0242.B3_P20 GQ024 Populus trichoca... 119 2e-029
gb|CV239848.1|CV239848 WS0233.B21_K12 PT-MB-A-13 Populus tr... 119 2e-029
gb|DT486994.1|DT486994 WS02532.B21_H24 PT-MB-N-A-15 Populus... 119 2e-029
gb|CV259409.1|CV259409 WS02011.B21_E13 PTxN-IB-N-A-11 Popul... 119 2e-029
gb|DT478872.1|DT478872 WS02524.BR_A19 PT-MB-N-A-15 Populus ... 119 2e-029
gb|DT492173.1|DT492173 WS02549.C21_N17 PT-MB-N-A-15 Populus... 119 2e-029
gb|CV231359.1|CV231359 WS0194.B21_E22 PT-DX-N-A-10 Populus ... 119 2e-029
gb|BU878912.1|BU878912 V053D04 Populus flower cDNA library ... 119 2e-029
gb|CV239536.1|CV239536 WS0232.B21_L15 PT-MB-A-13 Populus tr... 119 2e-029
gb|CV273763.1|CV273763 WS01712.B21_B10 PTxD-NR-A-8 Populus ... 119 2e-029
gb|DT488095.1|DT488095 WS02535.B21_H24 PT-MB-N-A-15 Populus... 114 3e-029
gb|CV252840.1|CV252840 PX0019.B21.1_C23 PT-X-FL-A-1 Populus... 114 3e-029
gb|CF237334.1|CF237334 Ptajxtjxt4H12H1216 Poplar cDNA libra... 115 3e-029
gb|CV230414.1|CV230414 WS01916.B21_H11 PT-DX-N-A-10 Populus... 114 3e-029
gb|CV251260.1|CV251260 WS0116.B21_G06 PT-P-FL-A-2 Populus t... 114 3e-029
gb|CV252932.1|CV252932 PX0019.B21.1_I21 PT-X-FL-A-1 Populus... 114 3e-029
gb|CX658695.1|CX658695 PO01021B02 Poplar SC cDNA library Po... 115 3e-029
gb|DT498798.1|DT498798 WS0116.BR_G06 PT-P-FL-A-2 Populus tr... 114 3e-029
gb|CV232949.1|CV232949 WS0199.B21_C20 PT-DX-N-A-10 Populus ... 114 3e-029
gb|BU882625.1|BU882625 UM80TB12 Populus flower cDNA library... 118 3e-029
gb|CV256225.1|CV256225 WS0243.B21_E12 PTxD-ICC-N-A-14 Popul... 114 6e-029
gb|CV258008.1|CV258008 WS0248.B21_E10 PTxD-ICC-N-A-14 Popul... 118 6e-029
gb|DT494449.1|DT494449 WS01118.BR.1_H08 PT-P-FL-A-2 Populus... 114 8e-029
gb|CV247524.1|CV247524 WS01118.B21_H08 PT-P-FL-A-2 Populus ... 114 8e-029
gb|CV237083.1|CV237083 WS01226.B21.1_M02 PT-GT-FL-A-3 Popul... 114 8e-029
gb|DT472606.1|DT472606 WS01226.BR_M02 PT-GT-FL-A-3 Populus ... 114 8e-029
gb|CV272702.1|CV272702 WS0158.B21_H07 PTxN-IB-A-6 Populus t... 117 1e-028
gb|DT518500.1|DT518500 WS02438.B21_F12 PTxD-ICC-N-A-14 Popu... 117 1e-028
gb|AJ773247.1|AJ773247 AJ773247 Populus euphratica leaf 3-6... 127 2e-028
gb|DN486294.1|DN486294 P014G07.3pR Populus petioles cDNA li... 111 2e-028
gb|BU888953.1|BU888953 P014G07 Populus petioles cDNA librar... 111 2e-028
gb|DN495851.1|DN495851 P014G07.5pR Populus petioles cDNA li... 111 2e-028
gb|DN485328.1|DN485328 M127A10.3pR Populus female catkins c... 119 3e-028
gb|AJ774712.1|AJ774712 AJ774712 Populus euphratica shoot 3-... 115 7e-028
gb|CA924513.1|CA924513 MTU7CL.P6.E11 Aspen leaf cDNA Librar... 125 8e-028
gb|CK096033.1|CK096033 UA42BPC05.3pR Populus dormant cambiu... 124 1e-027
gb|BU880411.1|BU880411 UM45TF11 Populus flower cDNA library... 109 2e-027
gb|CA924528.1|CA924528 MTU7CL.P6.G10 Aspen leaf cDNA Librar... 123 2e-027
gb|CV262197.1|CV262197 WS02018.B21_O10 PTxN-IB-N-A-11 Popul... 123 2e-027
gb|CA821842.1|CA821842 RSH08C10 two-month-old roots from cl... 109 2e-027
gb|DT506831.1|DT506831 WS02416.BR_K03 PTxD-ICC-N-A-14 Popul... 123 3e-027
gb|DT510358.1|DT510358 WS02426.BR_F07 PTxD-ICC-N-A-14 Popul... 123 3e-027
gb|DT511499.1|DT511499 WS02416.B21_K03 PTxD-ICC-N-A-14 Popu... 123 3e-027
gb|DT514987.1|DT514987 WS02426.B21_F07 PTxD-ICC-N-A-14 Popu... 123 3e-027
gb|CA825646.1|CA825646 R63H08 two-month-old roots from clon... 107 9e-027
gb|BU882845.1|BU882845 UM83TA07 Populus flower cDNA library... 107 9e-027
gb|CV267163.1|CV267163 WS02030.B21_P23 PTxN-IB-N-A-11 Popul... 120 2e-026
gb|CF233419.1|CF233419 PtaJXO0023B4B0404 Poplar cDNA librar... 105 3e-026
gb|BU879777.1|BU879777 UM37TC12 Populus flower cDNA library... 119 4e-026
gb|DN490897.1|DN490897 UM37TC12.3pR Populus female catkins ... 119 4e-026
gb|DN500902.1|DN500902 UM37TC12.5pR Populus female catkins ... 119 4e-026
gb|CV231564.1|CV231564 WS0194.B21_O17 PT-DX-N-A-10 Populus ... 118 7e-026
gb|CV248063.1|CV248063 WS0112.B21_E19 PT-P-FL-A-2 Populus t... 118 7e-026
gb|CV263844.1|CV263844 WS02022.B21_O24 PTxN-IB-N-A-11 Popul... 118 7e-026
gb|CV269025.1|CV269025 WS0207.B21_C01 PTxN-IB-N-A-11 Populu... 118 7e-026
gb|CV231482.1|CV231482 WS0194.B21_K22 PT-DX-N-A-10 Populus ... 118 1e-025
gb|CV231605.1|CV231605 WS0195.B21_A12 PT-DX-N-A-10 Populus ... 118 1e-025
gb|CV250863.1|CV250863 WS0115.B21_A19 PT-P-FL-A-2 Populus t... 118 1e-025
gb|CV252051.1|CV252051 WS0119.B21_D08 PT-P-FL-A-2 Populus t... 116 2e-025
gb|DT495070.1|DT495070 WS0112.BR_E19 PT-P-FL-A-2 Populus tr... 116 5e-025
gb|BU883422.1|BU883422 UM90TE05 Populus flower cDNA library... 104 7e-025
gb|BU819318.1|BU819318 UA42BPC05 Populus tremula cambium cD... 114 1e-024
gb|CV227604.1|CV227604 WS0167.B21_K15 PT-DX-A-7 Populus tri... 113 2e-024
gb|DN499907.1|DN499907 T097G04.5pR Populus shoot meristem c... 91 3e-024
gb|CN549966.1|CN549966 GQ0243.B3_C02 GQ024 Populus trichoca... 111 1e-023
gb|CF228696.1|CF228696 PtaXM0016C4C0406 Poplar cDNA library... 111 2e-023
gb|DN492693.1|DN492693 X032A02.3pR Populus wood cDNA librar... 105 5e-022
gb|DT500680.1|DT500680 PX0019.BR.1_I21 PT-X-FL-A-1 Populus ... 89 1e-021
gb|BU882070.1|BU882070 UM72TC03 Populus flower cDNA library... 89 2e-021
gb|CV255816.1|CV255816 WS0242.B21_C05 PTxD-ICC-N-A-14 Popul... 102 5e-021
gb|BU824424.1|BU824424 UB64CPB10 Populus tremula cambium cD... 70 8e-021
>gb|DN502705.1|DN502705 X032A02.5pR Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA clone X032A02 5', mRNA sequence
Length = 698
Score = 123 bits (264), Expect(2) = 3e-031
Identities = 53/89 (59%), Positives = 62/89 (69%)
Frame = -1 / +2
Query: 434 VGRAQGTYTFADQQTFGLLMVMDFVFTAGEHKGSTLSILGRXEVLSDVREMSIVGGSGKF 255
VGRAQG Y A Q LM ++FVFT G++ GSTLSILGR V S VREM +VGGSG F
Sbjct: 284 VGRAQGIYASASQSELSFLMALNFVFTEGKYNGSTLSILGRNSVFSGVREMPVVGGSGLF 463
Query: 254 RMARGYVQAHTIDSGFKSGETVVQYTVNV 168
R ARGY QA T D FK+G+ +V+Y V V
Sbjct: 464 RFARGYAQAKTHDLDFKTGDAIVEYNVYV 550
Score = 32.7 bits (65), Expect(2) = 3e-031
Identities = 10/18 (55%), Positives = 17/18 (94%)
Frame = -1 / +1
Query: 584 FFHDIVAGTSPTAIRIAQ 531
+FHDIV+G++PTA+ +A+
Sbjct: 214 YFHDIVSGSNPTAVPVAR 267
>gb|CV226275.1|CV226275 WS0163.B21_M18 PT-DX-A-7 Populus trichocarpa cDNA clone WS0163_M18
3', mRNA sequence
Length = 776
Score = 116 bits (248), Expect(3) = 8e-031
Identities = 53/89 (59%), Positives = 59/89 (66%)
Frame = -1 / -2
Query: 434 VGRAQGTYTFADQQTFGLLMVMDFVFTAGEHKGSTLSILGRXEVLSDVREMSIVGGSGKF 255
VGRAQG Y FA Q GLLMV++F F G + GS LSIL R VL +VREM IVGGSG F
Sbjct: 499 VGRAQGVYAFASQHDAGLLMVLNFAFLEGTYNGSALSILSRSPVLDNVREMPIVGGSGLF 320
Query: 254 RMARGYVQAHTIDSGFKSGETVVQYTVNV 168
R ARGY + TI S KS VV+Y V V
Sbjct: 319 RFARGYSLSKTISSSQKSRNVVVEYNVTV 233
Score = 30.9 bits (61), Expect(3) = 8e-031
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = -1 / -2
Query: 599 TTFKVFFHDIVAGTSPTAIRIA 534
T + +FHDI +G +PT +RIA
Sbjct: 655 TRLRFYFHDIPSGKNPTNMRIA 590
Score = 25.4 bits (49), Expect(3) = 8e-031
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = -1 / -2
Query: 515 TSSTSFGAMVAIDDPLTTGP 456
T++ SFG+ +D PLT P
Sbjct: 577 TTADSFGSTFMVDSPLTEEP 518
>gb|BU895854.1|BU895854 X032A02 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 520
Score = 122 bits (260), Expect(2) = 1e-030
Identities = 52/89 (58%), Positives = 61/89 (68%)
Frame = -1 / +3
Query: 434 VGRAQGTYTFADQQTFGLLMVMDFVFTAGEHKGSTLSILGRXEVLSDVREMSIVGGSGKF 255
VGRAQG Y A Q LM ++FVFT G++ GSTLSILGR V S VREM + GGSG F
Sbjct: 246 VGRAQGIYASASQSELSFLMALNFVFTEGKYNGSTLSILGRNSVFSGVREMPVAGGSGLF 425
Query: 254 RMARGYVQAHTIDSGFKSGETVVQYTVNV 168
R ARGY QA T D FK+G+ +V+Y V V
Sbjct: 426 RFARGYAQAKTHDLDFKTGDAIVEYNVYV 512
Score = 32.7 bits (65), Expect(2) = 1e-030
Identities = 10/18 (55%), Positives = 17/18 (94%)
Frame = -1 / +2
Query: 584 FFHDIVAGTSPTAIRIAQ 531
+FHDIV+G++PTA+ +A+
Sbjct: 176 YFHDIVSGSNPTAVPVAR 229
>gb|BU886325.1|BU886325 R043G11 Populus root cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 698
Score = 119 bits (254), Expect(2) = 2e-030
Identities = 51/89 (57%), Positives = 62/89 (69%)
Frame = -1 / +1
Query: 434 VGRAQGTYTFADQQTFGLLMVMDFVFTAGEHKGSTLSILGRXEVLSDVREMSIVGGSGKF 255
VG+AQG Y A QQ GLLM M+F F G++ GSTL++LGR EV S VREM ++GGSG F
Sbjct: 358 VGKAQGFYAQASQQDLGLLMAMNFAFIEGKYNGSTLTVLGRNEVFSTVREMPVIGGSGLF 537
Query: 254 RMARGYVQAHTIDSGFKSGETVVQYTVNV 168
R ARGYVQA T K+G+ V+Y V V
Sbjct: 538 RFARGYVQARTHMVDLKTGDATVEYNVYV 624
Score = 34.1 bits (68), Expect(2) = 2e-030
Identities = 16/35 (45%), Positives = 19/35 (54%)
Frame = -1 / +1
Query: 560 TSPTAIRIAQGAASNTSSTSFGAMVAIDDPLTTGP 456
T P I NTS T+FG + ID+PLT GP
Sbjct: 235 TGPNPSSIQVVPPLNTSITAFGLVRMIDNPLTLGP 339
>gb|DN489981.1|DN489981 T097G04.3pR Populus shoot meristem cDNA library Populus tremula x
Populus tremuloides cDNA clone T097G04 3', mRNA sequence
Length = 777
Score = 111 bits (237), Expect(3) = 4e-030
Identities = 50/89 (56%), Positives = 57/89 (64%)
Frame = -1 / -3
Query: 434 VGRAQGTYTFADQQTFGLLMVMDFVFTAGEHKGSTLSILGRXEVLSDVREMSIVGGSGKF 255
VGRAQG Y FA Q GLLMV++F F G GS LSILGR V ++REM IVGGSG F
Sbjct: 466 VGRAQGVYAFASQHDAGLLMVLNFAFLEGTCNGSALSILGRSPVFDNIREMPIVGGSGLF 287
Query: 254 RMARGYVQAHTIDSGFKSGETVVQYTVNV 168
R ARGY + + S KS VV+Y V V
Sbjct: 286 RFARGYSLSKIVSSSQKSRNVVVEYNVTV 200
Score = 30.9 bits (61), Expect(3) = 4e-030
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = -1 / -3
Query: 599 TTFKVFFHDIVAGTSPTAIRIA 534
T + +FHDI +G +PT +RIA
Sbjct: 622 TRLRFYFHDIPSGKNPTNMRIA 557
Score = 28.1 bits (55), Expect(3) = 4e-030
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -1 / -3
Query: 518 NTSSTSFGAMVAIDDPLTTGP 456
NT++ SFG+ +D PLT P
Sbjct: 547 NTTADSFGSTFMVDSPLTEEP 485
>gb|DT516903.1|DT516903 WS02432.B21_L22 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02432_L22 3', mRNA sequence
Length = 886
Score = 118 bits (252), Expect(2) = 5e-030
Identities = 50/89 (56%), Positives = 62/89 (69%)
Frame = -1 / -3
Query: 434 VGRAQGTYTFADQQTFGLLMVMDFVFTAGEHKGSTLSILGRXEVLSDVREMSIVGGSGKF 255
VG+AQG Y A QQ GLLM M+F F G++ GST+++LGR EV S VREM ++GGSG F
Sbjct: 533 VGKAQGFYAQASQQDLGLLMAMNFAFIEGKYNGSTITVLGRNEVFSTVREMPVIGGSGLF 354
Query: 254 RMARGYVQAHTIDSGFKSGETVVQYTVNV 168
R ARGYVQA T K+G+ V+Y V V
Sbjct: 353 RFARGYVQARTHMVDLKTGDATVEYNVYV 267
Score = 34.1 bits (68), Expect(2) = 5e-030
Identities = 16/35 (45%), Positives = 19/35 (54%)
Frame = -1 / -3
Query: 560 TSPTAIRIAQGAASNTSSTSFGAMVAIDDPLTTGP 456
T P I NTS T+FG + ID+PLT GP
Sbjct: 656 TGPNPSSIQVVPPLNTSITAFGLVRMIDNPLTLGP 552
>gb|DT483078.1|DT483078 WS02521.B21_J12 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02521_J12 3', mRNA sequence
Length = 875
Score = 118 bits (252), Expect(2) = 5e-030
Identities = 50/89 (56%), Positives = 62/89 (69%)
Frame = -1 / -2
Query: 434 VGRAQGTYTFADQQTFGLLMVMDFVFTAGEHKGSTLSILGRXEVLSDVREMSIVGGSGKF 255
VG+AQG Y A QQ GLLM M+F F G++ GST+++LGR EV S VREM ++GGSG F
Sbjct: 517 VGKAQGFYAQASQQDLGLLMAMNFAFIEGKYNGSTITVLGRNEVFSTVREMPVIGGSGLF 338
Query: 254 RMARGYVQAHTIDSGFKSGETVVQYTVNV 168
R ARGYVQA T K+G+ V+Y V V
Sbjct: 337 RFARGYVQARTHMVDLKTGDATVEYNVYV 251
Score = 34.1 bits (68), Expect(2) = 5e-030
Identities = 16/35 (45%), Positives = 19/35 (54%)
Frame = -1 / -2
Query: 560 TSPTAIRIAQGAASNTSSTSFGAMVAIDDPLTTGP 456
T P I NTS T+FG + ID+PLT GP
Sbjct: 640 TGPNPSSIQVVPPLNTSITAFGLVRMIDNPLTLGP 536
>gb|DT514797.1|DT514797 WS02425.B21_M24 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02425_M24 3', mRNA sequence
Length = 872
Score = 118 bits (252), Expect(2) = 5e-030
Identities = 50/89 (56%), Positives = 62/89 (69%)
Frame = -1 / -1
Query: 434 VGRAQGTYTFADQQTFGLLMVMDFVFTAGEHKGSTLSILGRXEVLSDVREMSIVGGSGKF 255
VG+AQG Y A QQ GLLM M+F F G++ GST+++LGR EV S VREM ++GGSG F
Sbjct: 530 VGKAQGFYAQASQQDLGLLMAMNFAFIEGKYNGSTITVLGRNEVFSTVREMPVIGGSGLF 351
Query: 254 RMARGYVQAHTIDSGFKSGETVVQYTVNV 168
R ARGYVQA T K+G+ V+Y V V
Sbjct: 350 RFARGYVQARTHMVDLKTGDATVEYNVYV 264
Score = 34.1 bits (68), Expect(2) = 5e-030
Identities = 16/35 (45%), Positives = 19/35 (54%)
Frame = -1 / -1
Query: 560 TSPTAIRIAQGAASNTSSTSFGAMVAIDDPLTTGP 456
T P I NTS T+FG + ID+PLT GP
Sbjct: 653 TGPNPSSIQVVPPLNTSITAFGLVRMIDNPLTLGP 549
>gb|DT510857.1|DT510857 WS02427.BR_N17 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02427_N17 5', mRNA sequence
Length = 858
Score = 118 bits (252), Expect(2) = 5e-030
Identities = 50/89 (56%), Positives = 62/89 (69%)
Frame = -1 / +3
Query: 434 VGRAQGTYTFADQQTFGLLMVMDFVFTAGEHKGSTLSILGRXEVLSDVREMSIVGGSGKF 255
VG+AQG Y A QQ GLLM M+F F G++ GST+++LGR EV S VREM ++GGSG F
Sbjct: 372 VGKAQGFYAQASQQDLGLLMAMNFAFIEGKYNGSTITVLGRNEVFSTVREMPVIGGSGLF 551
Query: 254 RMARGYVQAHTIDSGFKSGETVVQYTVNV 168
R ARGYVQA T K+G+ V+Y V V
Sbjct: 552 RFARGYVQARTHMVDLKTGDATVEYNVYV 638
Score = 34.1 bits (68), Expect(2) = 5e-030
Identities = 16/35 (45%), Positives = 19/35 (54%)
Frame = -1 / +3
Query: 560 TSPTAIRIAQGAASNTSSTSFGAMVAIDDPLTTGP 456
T P I NTS T+FG + ID+PLT GP
Sbjct: 249 TGPNPSSIQVVPPLNTSITAFGLVRMIDNPLTLGP 353
>gb|DT517096.1|DT517096 WS02433.B21_E19 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02433_E19 3', mRNA sequence
Length = 850
Score = 118 bits (252), Expect(2) = 5e-030
Identities = 50/89 (56%), Positives = 62/89 (69%)
Frame = -1 / -2
Query: 434 VGRAQGTYTFADQQTFGLLMVMDFVFTAGEHKGSTLSILGRXEVLSDVREMSIVGGSGKF 255
VG+AQG Y A QQ GLLM M+F F G++ GST+++LGR EV S VREM ++GGSG F
Sbjct: 471 VGKAQGFYAQASQQDLGLLMAMNFAFIEGKYNGSTITVLGRNEVFSTVREMPVIGGSGLF 292
Query: 254 RMARGYVQAHTIDSGFKSGETVVQYTVNV 168
R ARGYVQA T K+G+ V+Y V V
Sbjct: 291 RFARGYVQARTHMVDLKTGDATVEYNVYV 205
Score = 34.1 bits (68), Expect(2) = 5e-030
Identities = 16/35 (45%), Positives = 19/35 (54%)
Frame = -1 / -2
Query: 560 TSPTAIRIAQGAASNTSSTSFGAMVAIDDPLTTGP 456
T P I NTS T+FG + ID+PLT GP
Sbjct: 594 TGPNPSSIQVVPPLNTSITAFGLVRMIDNPLTLGP 490
>gb|DT510178.1|DT510178 WS02425.BR_M24 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02425_M24 5', mRNA sequence
Length = 848
Score = 118 bits (252), Expect(2) = 5e-030
Identities = 50/89 (56%), Positives = 62/89 (69%)
Frame = -1 / +1
Query: 434 VGRAQGTYTFADQQTFGLLMVMDFVFTAGEHKGSTLSILGRXEVLSDVREMSIVGGSGKF 255
VG+AQG Y A QQ GLLM M+F F G++ GST+++LGR EV S VREM ++GGSG F
Sbjct: 352 VGKAQGFYAQASQQDLGLLMAMNFAFIEGKYNGSTITVLGRNEVFSTVREMPVIGGSGLF 531
Query: 254 RMARGYVQAHTIDSGFKSGETVVQYTVNV 168
R ARGYVQA T K+G+ V+Y V V
Sbjct: 532 RFARGYVQARTHMVDLKTGDATVEYNVYV 618
Score = 34.1 bits (68), Expect(2) = 5e-030
Identities = 16/35 (45%), Positives = 19/35 (54%)
Frame = -1 / +1
Query: 560 TSPTAIRIAQGAASNTSSTSFGAMVAIDDPLTTGP 456
T P I NTS T+FG + ID+PLT GP
Sbjct: 229 TGPNPSSIQVVPPLNTSITAFGLVRMIDNPLTLGP 333
>gb|DT508118.1|DT508118 WS02420.BR_B20 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02420_B20 5', mRNA sequence
Length = 834
Score = 118 bits (252), Expect(2) = 5e-030
Identities = 50/89 (56%), Positives = 62/89 (69%)
Frame = -1 / +1
Query: 434 VGRAQGTYTFADQQTFGLLMVMDFVFTAGEHKGSTLSILGRXEVLSDVREMSIVGGSGKF 255
VG+AQG Y A QQ GLLM M+F F G++ GST+++LGR EV S VREM ++GGSG F
Sbjct: 361 VGKAQGFYAQASQQDLGLLMAMNFAFIEGKYNGSTITVLGRNEVFSTVREMPVIGGSGLF 540
Query: 254 RMARGYVQAHTIDSGFKSGETVVQYTVNV 168
R ARGYVQA T K+G+ V+Y V V
Sbjct: 541 RFARGYVQARTHMVDLKTGDATVEYNVYV 627
Score = 34.1 bits (68), Expect(2) = 5e-030
Identities = 16/35 (45%), Positives = 19/35 (54%)
Frame = -1 / +1
Query: 560 TSPTAIRIAQGAASNTSSTSFGAMVAIDDPLTTGP 456
T P I NTS T+FG + ID+PLT GP
Sbjct: 238 TGPNPSSIQVVPPLNTSITAFGLVRMIDNPLTLGP 342
>gb|DT512737.1|DT512737 WS02420.B21_B20 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02420_B20 3', mRNA sequence
Length = 834
Score = 118 bits (252), Expect(2) = 5e-030
Identities = 50/89 (56%), Positives = 62/89 (69%)
Frame = -1 / -1
Query: 434 VGRAQGTYTFADQQTFGLLMVMDFVFTAGEHKGSTLSILGRXEVLSDVREMSIVGGSGKF 255
VG+AQG Y A QQ GLLM M+F F G++ GST+++LGR EV S VREM ++GGSG F
Sbjct: 474 VGKAQGFYAQASQQDLGLLMAMNFAFIEGKYNGSTITVLGRNEVFSTVREMPVIGGSGLF 295
Query: 254 RMARGYVQAHTIDSGFKSGETVVQYTVNV 168
R ARGYVQA T K+G+ V+Y V V
Sbjct: 294 RFARGYVQARTHMVDLKTGDATVEYNVYV 208
Score = 34.1 bits (68), Expect(2) = 5e-030
Identities = 16/35 (45%), Positives = 19/35 (54%)
Frame = -1 / -1
Query: 560 TSPTAIRIAQGAASNTSSTSFGAMVAIDDPLTTGP 456
T P I NTS T+FG + ID+PLT GP
Sbjct: 597 TGPNPSSIQVVPPLNTSITAFGLVRMIDNPLTLGP 493
>gb|CV256484.1|CV256484 WS0243.B21_P16 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS0243_P16 3', mRNA sequence
Length = 811
Score = 118 bits (252), Expect(2) = 5e-030
Identities = 50/89 (56%), Positives = 62/89 (69%)
Frame = -1 / -2
Query: 434 VGRAQGTYTFADQQTFGLLMVMDFVFTAGEHKGSTLSILGRXEVLSDVREMSIVGGSGKF 255
VG+AQG Y A QQ GLLM M+F F G++ GST+++LGR EV S VREM ++GGSG F
Sbjct: 465 VGKAQGFYAQASQQDLGLLMAMNFAFIEGKYNGSTITVLGRNEVFSTVREMPVIGGSGLF 286
Query: 254 RMARGYVQAHTIDSGFKSGETVVQYTVNV 168
R ARGYVQA T K+G+ V+Y V V
Sbjct: 285 RFARGYVQARTHMVDLKTGDATVEYNVYV 199
Score = 34.1 bits (68), Expect(2) = 5e-030
Identities = 16/35 (45%), Positives = 19/35 (54%)
Frame = -1 / -2
Query: 560 TSPTAIRIAQGAASNTSSTSFGAMVAIDDPLTTGP 456
T P I NTS T+FG + ID+PLT GP
Sbjct: 588 TGPNPSSIQVVPPLNTSITAFGLVRMIDNPLTLGP 484
>gb|DT496046.1|DT496046 WS01122.BR_E01 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01122_E01 5', mRNA sequence
Length = 805
Score = 118 bits (252), Expect(2) = 5e-030
Identities = 50/89 (56%), Positives = 62/89 (69%)
Frame = -1 / +3
Query: 434 VGRAQGTYTFADQQTFGLLMVMDFVFTAGEHKGSTLSILGRXEVLSDVREMSIVGGSGKF 255
VG+AQG Y A QQ GLLM M+F F G++ GST+++LGR EV S VREM ++GGSG F
Sbjct: 291 VGKAQGFYAQASQQDLGLLMAMNFAFIEGKYNGSTITVLGRNEVFSTVREMPVIGGSGLF 470
Query: 254 RMARGYVQAHTIDSGFKSGETVVQYTVNV 168
R ARGYVQA T K+G+ V+Y V V
Sbjct: 471 RFARGYVQARTHMVDLKTGDATVEYNVYV 557
Score = 34.1 bits (68), Expect(2) = 5e-030
Identities = 16/35 (45%), Positives = 19/35 (54%)
Frame = -1 / +3
Query: 560 TSPTAIRIAQGAASNTSSTSFGAMVAIDDPLTTGP 456
T P I NTS T+FG + ID+PLT GP
Sbjct: 168 TGPNPSSIQVVPPLNTSITAFGLVRMIDNPLTLGP 272
>gb|DT478008.1|DT478008 WS02521.BR_J12 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02521_J12 5', mRNA sequence
Length = 798
Score = 118 bits (252), Expect(2) = 5e-030
Identities = 50/89 (56%), Positives = 62/89 (69%)
Frame = -1 / +2
Query: 434 VGRAQGTYTFADQQTFGLLMVMDFVFTAGEHKGSTLSILGRXEVLSDVREMSIVGGSGKF 255
VG+AQG Y A QQ GLLM M+F F G++ GST+++LGR EV S VREM ++GGSG F
Sbjct: 359 VGKAQGFYAQASQQDLGLLMAMNFAFIEGKYNGSTITVLGRNEVFSTVREMPVIGGSGLF 538
Query: 254 RMARGYVQAHTIDSGFKSGETVVQYTVNV 168
R ARGYVQA T K+G+ V+Y V V
Sbjct: 539 RFARGYVQARTHMVDLKTGDATVEYNVYV 625
Score = 34.1 bits (68), Expect(2) = 5e-030
Identities = 16/35 (45%), Positives = 19/35 (54%)
Frame = -1 / +2
Query: 560 TSPTAIRIAQGAASNTSSTSFGAMVAIDDPLTTGP 456
T P I NTS T+FG + ID+PLT GP
Sbjct: 236 TGPNPSSIQVVPPLNTSITAFGLVRMIDNPLTLGP 340
>gb|DN494791.1|DN494791 M127A10.5pR Populus female catkins cDNA library Populus trichocarpa
cDNA clone M127A10 5', mRNA sequence
Length = 694
Score = 118 bits (252), Expect(2) = 5e-030
Identities = 50/89 (56%), Positives = 62/89 (69%)
Frame = -1 / +1
Query: 434 VGRAQGTYTFADQQTFGLLMVMDFVFTAGEHKGSTLSILGRXEVLSDVREMSIVGGSGKF 255
VG+AQG Y A QQ GLLM M+F F G++ GST+++LGR EV S VREM ++GGSG F
Sbjct: 211 VGKAQGFYAQASQQDLGLLMAMNFAFIEGKYNGSTITVLGRNEVFSTVREMPVIGGSGLF 390
Query: 254 RMARGYVQAHTIDSGFKSGETVVQYTVNV 168
R ARGYVQA T K+G+ V+Y V V
Sbjct: 391 RFARGYVQARTHMVDLKTGDATVEYNVYV 477
Score = 34.1 bits (68), Expect(2) = 5e-030
Identities = 16/35 (45%), Positives = 19/35 (54%)
Frame = -1 / +1
Query: 560 TSPTAIRIAQGAASNTSSTSFGAMVAIDDPLTTGP 456
T P I NTS T+FG + ID+PLT GP
Sbjct: 88 TGPNPSSIQVVPPLNTSITAFGLVRMIDNPLTLGP 192
>gb|DT498331.1|DT498331 WS0115.BR_A19 PT-P-FL-A-2 Populus trichocarpa cDNA clone WS0115_A19
5', mRNA sequence
Length = 688
Score = 118 bits (252), Expect(2) = 5e-030
Identities = 50/89 (56%), Positives = 62/89 (69%)
Frame = -1 / +3
Query: 434 VGRAQGTYTFADQQTFGLLMVMDFVFTAGEHKGSTLSILGRXEVLSDVREMSIVGGSGKF 255
VG+AQG Y A QQ GLLM M+F F G++ GST+++LGR EV S VREM ++GGSG F
Sbjct: 288 VGKAQGFYAQASQQDLGLLMAMNFAFIEGKYNGSTITVLGRNEVFSTVREMPVIGGSGLF 467
Query: 254 RMARGYVQAHTIDSGFKSGETVVQYTVNV 168
R ARGYVQA T K+G+ V+Y V V
Sbjct: 468 RFARGYVQARTHMVDLKTGDATVEYNVYV 554
Score = 34.1 bits (68), Expect(2) = 5e-030
Identities = 16/35 (45%), Positives = 19/35 (54%)
Frame = -1 / +3
Query: 560 TSPTAIRIAQGAASNTSSTSFGAMVAIDDPLTTGP 456
T P I NTS T+FG + ID+PLT GP
Sbjct: 165 TGPNPSSIQVVPPLNTSITAFGLVRMIDNPLTLGP 269
>gb|BU869184.1|BU869184 M127A10 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 684
Score = 118 bits (252), Expect(2) = 5e-030
Identities = 50/89 (56%), Positives = 62/89 (69%)
Frame = -1 / +2
Query: 434 VGRAQGTYTFADQQTFGLLMVMDFVFTAGEHKGSTLSILGRXEVLSDVREMSIVGGSGKF 255
VG+AQG Y A QQ GLLM M+F F G++ GST+++LGR EV S VREM ++GGSG F
Sbjct: 212 VGKAQGFYAQASQQDLGLLMAMNFAFIEGKYNGSTITVLGRNEVFSTVREMPVIGGSGLF 391
Query: 254 RMARGYVQAHTIDSGFKSGETVVQYTVNV 168
R ARGYVQA T K+G+ V+Y V V
Sbjct: 392 RFARGYVQARTHMVDLKTGDATVEYNVYV 478
Score = 34.1 bits (68), Expect(2) = 5e-030
Identities = 16/35 (45%), Positives = 19/35 (54%)
Frame = -1 / +2
Query: 560 TSPTAIRIAQGAASNTSSTSFGAMVAIDDPLTTGP 456
T P I NTS T+FG + ID+PLT GP
Sbjct: 89 TGPNPSSIQVVPPLNTSITAFGLVRMIDNPLTLGP 193
>gb|CV248874.1|CV248874 WS01122.B21_E01 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01122_E01 3', mRNA sequence
Length = 686
Score = 118 bits (252), Expect(2) = 5e-030
Identities = 50/89 (56%), Positives = 62/89 (69%)
Frame = -1 / -1
Query: 434 VGRAQGTYTFADQQTFGLLMVMDFVFTAGEHKGSTLSILGRXEVLSDVREMSIVGGSGKF 255
VG+AQG Y A QQ GLLM M+F F G++ GST+++LGR EV S VREM ++GGSG F
Sbjct: 515 VGKAQGFYAQASQQDLGLLMAMNFAFIEGKYNGSTITVLGRNEVFSTVREMPVIGGSGLF 336
Query: 254 RMARGYVQAHTIDSGFKSGETVVQYTVNV 168
R ARGYVQA T K+G+ V+Y V V
Sbjct: 335 RFARGYVQARTHMVDLKTGDATVEYNVYV 249
Score = 34.1 bits (68), Expect(2) = 5e-030
Identities = 16/35 (45%), Positives = 19/35 (54%)
Frame = -1 / -1
Query: 560 TSPTAIRIAQGAASNTSSTSFGAMVAIDDPLTTGP 456
T P I NTS T+FG + ID+PLT GP
Sbjct: 638 TGPNPSSIQVVPPLNTSITAFGLVRMIDNPLTLGP 534
>gb|BU879790.1|BU879790 UM37TE04 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 520
Score = 118 bits (252), Expect(2) = 5e-030
Identities = 50/89 (56%), Positives = 62/89 (69%)
Frame = -1 / +3
Query: 434 VGRAQGTYTFADQQTFGLLMVMDFVFTAGEHKGSTLSILGRXEVLSDVREMSIVGGSGKF 255
VG+AQG Y A QQ GLLM M+F F G++ GST+++LGR EV S VREM ++GGSG F
Sbjct: 210 VGKAQGFYAQASQQDLGLLMAMNFAFIEGKYNGSTITVLGRNEVFSTVREMPVIGGSGLF 389
Query: 254 RMARGYVQAHTIDSGFKSGETVVQYTVNV 168
R ARGYVQA T K+G+ V+Y V V
Sbjct: 390 RFARGYVQARTHMVDLKTGDATVEYNVYV 476
Score = 34.1 bits (68), Expect(2) = 5e-030
Identities = 16/35 (45%), Positives = 19/35 (54%)
Frame = -1 / +3
Query: 560 TSPTAIRIAQGAASNTSSTSFGAMVAIDDPLTTGP 456
T P I NTS T+FG + ID+PLT GP
Sbjct: 87 TGPNPSSIQVVPPLNTSITAFGLVRMIDNPLTLGP 191
>gb|BU892875.1|BU892875 P070E11 Populus petioles cDNA library Populus tremula cDNA 5 prime,
mRNA sequence
Length = 713
Score = 119 bits (254), Expect(2) = 9e-030
Identities = 51/89 (57%), Positives = 62/89 (69%)
Frame = -1 / +3
Query: 434 VGRAQGTYTFADQQTFGLLMVMDFVFTAGEHKGSTLSILGRXEVLSDVREMSIVGGSGKF 255
VG+AQG Y A QQ GLLM M+F F G++ GSTL++LGR EV S VREM ++GGSG F
Sbjct: 372 VGKAQGFYAQASQQDLGLLMAMNFAFIEGKYNGSTLTVLGRNEVFSTVREMPVIGGSGLF 551
Query: 254 RMARGYVQAHTIDSGFKSGETVVQYTVNV 168
R ARGYVQA T K+G+ V+Y V V
Sbjct: 552 RFARGYVQARTHMVDLKTGDATVEYNVYV 638
Score = 32.2 bits (64), Expect(2) = 9e-030
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = -1 / +3
Query: 560 TSPTAIRIAQGAASNTSSTSFGAMVAIDDPLTTGP 456
T P + NTS T+FG + +D+PLT GP
Sbjct: 249 TGPNPSSVQVVPPLNTSITAFGLVRMMDNPLTLGP 353
>gb|CV226761.1|CV226761 WS0165.B21_D10 PT-DX-A-7 Populus trichocarpa cDNA clone WS0165_D10
3', mRNA sequence
Length = 799
Score = 111 bits (237), Expect(3) = 1e-029
Identities = 45/72 (62%), Positives = 56/72 (77%)
Frame = -1 / -1
Query: 434 VGRAQGTYTFADQQTFGLLMVMDFVFTAGEHKGSTLSILGRXEVLSDVREMSIVGGSGKF 255
VG+AQG Y A Q F LLMVM+F FT G++ GS++SILGR ++L+DVREM IVGGSG F
Sbjct: 502 VGKAQGLYALASQNDFCLLMVMNFAFTEGKYNGSSISILGRNQILNDVREMPIVGGSGLF 323
Query: 254 RMARGYVQAHTI 219
R+A GY AHT+
Sbjct: 322 RLAHGYALAHTV 287
Score = 35.0 bits (70), Expect(3) = 1e-029
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = -1 / -1
Query: 599 TTFKVFFHDIVAGTSPTAIRIA 534
T +FHDIV+G PTAIRIA
Sbjct: 649 THLHFYFHDIVSGKHPTAIRIA 584
Score = 22.1 bits (42), Expect(3) = 1e-029
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = -1 / -1
Query: 503 SFGAMVAIDDPLTTG 459
+FG + DDPLT G
Sbjct: 568 AFGDTMMADDPLTEG 524
>gb|CV234540.1|CV234540 WS01215.B21.1_E10 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01215_E10 3', mRNA sequence
Length = 783
Score = 119 bits (255), Expect(2) = 2e-029
Identities = 55/119 (46%), Positives = 72/119 (60%)
Frame = -1 / -1
Query: 524 ASNTSSTSFGAMVAIDDPLTTGPTRAAGTEVGRAQGTYTFADQQTFGLLMVMDFVFTAGE 345
A + +S + +++ D T + +GRAQG Y A Q+ LLM M+FVF G+
Sbjct: 552 APSNTSATLFGSISMIDDPLTEKPELSSKLIGRAQGFYGSAGQEETALLMAMNFVFLQGK 373
Query: 344 HKGSTLSILGRXEVLSDVREMSIVGGSGKFRMARGYVQAHTIDSGFKSGETVVQYTVNV 168
+ GST+SILGR V S VREM ++GGSG FR ARGY QA T KSG+ VV+Y V V
Sbjct: 372 YNGSTISILGRNHVFSKVREMPVIGGSGLFRFARGYAQASTHSFDLKSGDAVVEYNVYV 196
Score = 30.9 bits (61), Expect(2) = 2e-029
Identities = 10/31 (32%), Positives = 22/31 (70%)
Frame = -1 / -1
Query: 599 TTFKVFFHDIVAGTSPTAIRIAQGAASNTSS 507
T F+V++HDI + +PTA+ I + ++ +++
Sbjct: 621 THFRVYWHDIYSAPNPTAMPIVRAPSNTSAT 529
>gb|DT480883.1|DT480883 WS02530.BR_D15 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02530_D15 5', mRNA sequence
Length = 769
Score = 119 bits (255), Expect(2) = 2e-029
Identities = 55/119 (46%), Positives = 72/119 (60%)
Frame = -1 / +1
Query: 524 ASNTSSTSFGAMVAIDDPLTTGPTRAAGTEVGRAQGTYTFADQQTFGLLMVMDFVFTAGE 345
A + +S + +++ D T + +GRAQG Y A Q+ LLM M+FVF G+
Sbjct: 232 APSNTSATLFGSISMIDDPLTEKPELSSKLIGRAQGFYGSAGQEETALLMAMNFVFLQGK 411
Query: 344 HKGSTLSILGRXEVLSDVREMSIVGGSGKFRMARGYVQAHTIDSGFKSGETVVQYTVNV 168
+ GST+SILGR V S VREM ++GGSG FR ARGY QA T KSG+ VV+Y V V
Sbjct: 412 YNGSTISILGRNHVFSKVREMPVIGGSGLFRFARGYAQASTHSFDLKSGDAVVEYNVYV 588
Score = 30.9 bits (61), Expect(2) = 2e-029
Identities = 10/31 (32%), Positives = 22/31 (70%)
Frame = -1 / +1
Query: 599 TTFKVFFHDIVAGTSPTAIRIAQGAASNTSS 507
T F+V++HDI + +PTA+ I + ++ +++
Sbjct: 163 THFRVYWHDIYSAPNPTAMPIVRAPSNTSAT 255
>gb|DT486169.1|DT486169 WS02530.B21_D15 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02530_D15 3', mRNA sequence
Length = 768
Score = 119 bits (255), Expect(2) = 2e-029
Identities = 55/119 (46%), Positives = 72/119 (60%)
Frame = -1 / -1
Query: 524 ASNTSSTSFGAMVAIDDPLTTGPTRAAGTEVGRAQGTYTFADQQTFGLLMVMDFVFTAGE 345
A + +S + +++ D T + +GRAQG Y A Q+ LLM M+FVF G+
Sbjct: 585 APSNTSATLFGSISMIDDPLTEKPELSSKLIGRAQGFYGSAGQEETALLMAMNFVFLQGK 406
Query: 344 HKGSTLSILGRXEVLSDVREMSIVGGSGKFRMARGYVQAHTIDSGFKSGETVVQYTVNV 168
+ GST+SILGR V S VREM ++GGSG FR ARGY QA T KSG+ VV+Y V V
Sbjct: 405 YNGSTISILGRNHVFSKVREMPVIGGSGLFRFARGYAQASTHSFDLKSGDAVVEYNVYV 229
Score = 30.9 bits (61), Expect(2) = 2e-029
Identities = 10/31 (32%), Positives = 22/31 (70%)
Frame = -1 / -1
Query: 599 TTFKVFFHDIVAGTSPTAIRIAQGAASNTSS 507
T F+V++HDI + +PTA+ I + ++ +++
Sbjct: 654 THFRVYWHDIYSAPNPTAMPIVRAPSNTSAT 562
>gb|CV245789.1|CV245789 WS0259.B21_G06 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS0259_G06 3', mRNA sequence
Length = 757
Score = 119 bits (255), Expect(2) = 2e-029
Identities = 55/119 (46%), Positives = 72/119 (60%)
Frame = -1 / +2
Query: 524 ASNTSSTSFGAMVAIDDPLTTGPTRAAGTEVGRAQGTYTFADQQTFGLLMVMDFVFTAGE 345
A + +S + +++ D T + +GRAQG Y A Q+ LLM M+FVF G+
Sbjct: 233 APSNTSATLFGSISMIDDPLTEKPELSSKLIGRAQGFYGSAGQEETALLMAMNFVFLQGK 412
Query: 344 HKGSTLSILGRXEVLSDVREMSIVGGSGKFRMARGYVQAHTIDSGFKSGETVVQYTVNV 168
+ GST+SILGR V S VREM ++GGSG FR ARGY QA T KSG+ VV+Y V V
Sbjct: 413 YNGSTISILGRNHVFSKVREMPVIGGSGLFRFARGYAQASTHSFDLKSGDAVVEYNVYV 589
Score = 30.9 bits (61), Expect(2) = 2e-029
Identities = 10/31 (32%), Positives = 22/31 (70%)
Frame = -1 / +2
Query: 599 TTFKVFFHDIVAGTSPTAIRIAQGAASNTSS 507
T F+V++HDI + +PTA+ I + ++ +++
Sbjct: 164 THFRVYWHDIYSAPNPTAMPIVRAPSNTSAT 256
>gb|CV243558.1|CV243558 WS0252.B21_D10 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS0252_D10 3', mRNA sequence
Length = 748
Score = 119 bits (255), Expect(2) = 2e-029
Identities = 55/119 (46%), Positives = 72/119 (60%)
Frame = -1 / -1
Query: 524 ASNTSSTSFGAMVAIDDPLTTGPTRAAGTEVGRAQGTYTFADQQTFGLLMVMDFVFTAGE 345
A + +S + +++ D T + +GRAQG Y A Q+ LLM M+FVF G+
Sbjct: 538 APSNTSATLFGSISMIDDPLTEKPELSSKLIGRAQGFYGSAGQEETALLMAMNFVFLQGK 359
Query: 344 HKGSTLSILGRXEVLSDVREMSIVGGSGKFRMARGYVQAHTIDSGFKSGETVVQYTVNV 168
+ GST+SILGR V S VREM ++GGSG FR ARGY QA T KSG+ VV+Y V V
Sbjct: 358 YNGSTISILGRNHVFSKVREMPVIGGSGLFRFARGYAQASTHSFDLKSGDAVVEYNVYV 182
Score = 30.9 bits (61), Expect(2) = 2e-029
Identities = 10/31 (32%), Positives = 22/31 (70%)
Frame = -1 / -1
Query: 599 TTFKVFFHDIVAGTSPTAIRIAQGAASNTSS 507
T F+V++HDI + +PTA+ I + ++ +++
Sbjct: 607 THFRVYWHDIYSAPNPTAMPIVRAPSNTSAT 515
>gb|CV253151.1|CV253151 WS0221.B21_A12 PTxD-ICC-A-12 Populus trichocarpa x Populus
deltoides cDNA clone WS0221_A12 3', mRNA sequence
Length = 715
Score = 119 bits (255), Expect(2) = 2e-029
Identities = 55/119 (46%), Positives = 72/119 (60%)
Frame = -1 / -3
Query: 524 ASNTSSTSFGAMVAIDDPLTTGPTRAAGTEVGRAQGTYTFADQQTFGLLMVMDFVFTAGE 345
A + +S + +++ D T + +GRAQG Y A Q+ LLM M+FVF G+
Sbjct: 485 APSNTSATLFGSISMIDDPLTEKPELSSKLIGRAQGFYGSAGQEETALLMAMNFVFLQGK 306
Query: 344 HKGSTLSILGRXEVLSDVREMSIVGGSGKFRMARGYVQAHTIDSGFKSGETVVQYTVNV 168
+ GST+SILGR V S VREM ++GGSG FR ARGY QA T KSG+ VV+Y V V
Sbjct: 305 YNGSTISILGRNHVFSKVREMPVIGGSGLFRFARGYAQASTHSFDLKSGDAVVEYNVYV 129
Score = 30.9 bits (61), Expect(2) = 2e-029
Identities = 10/31 (32%), Positives = 22/31 (70%)
Frame = -1 / -3
Query: 599 TTFKVFFHDIVAGTSPTAIRIAQGAASNTSS 507
T F+V++HDI + +PTA+ I + ++ +++
Sbjct: 554 THFRVYWHDIYSAPNPTAMPIVRAPSNTSAT 462
>gb|CN549638.1|CN549638 GQ0242.B3_P20 GQ024 Populus trichocarpa x Populus deltoides cDNA
clone GQ0242_P20 5', mRNA sequence
Length = 702
Score = 119 bits (255), Expect(2) = 2e-029
Identities = 55/119 (46%), Positives = 72/119 (60%)
Frame = -1 / +3
Query: 524 ASNTSSTSFGAMVAIDDPLTTGPTRAAGTEVGRAQGTYTFADQQTFGLLMVMDFVFTAGE 345
A + +S + +++ D T + +GRAQG Y A Q+ LLM M+FVF G+
Sbjct: 231 APSNTSATLFGSISMIDDPLTEKPELSSKLIGRAQGFYGSAGQEETALLMAMNFVFLQGK 410
Query: 344 HKGSTLSILGRXEVLSDVREMSIVGGSGKFRMARGYVQAHTIDSGFKSGETVVQYTVNV 168
+ GST+SILGR V S VREM ++GGSG FR ARGY QA T KSG+ VV+Y V V
Sbjct: 411 YNGSTISILGRNHVFSKVREMPVIGGSGLFRFARGYAQASTHSFDLKSGDAVVEYNVYV 587
Score = 30.9 bits (61), Expect(2) = 2e-029
Identities = 10/31 (32%), Positives = 22/31 (70%)
Frame = -1 / +3
Query: 599 TTFKVFFHDIVAGTSPTAIRIAQGAASNTSS 507
T F+V++HDI + +PTA+ I + ++ +++
Sbjct: 162 THFRVYWHDIYSAPNPTAMPIVRAPSNTSAT 254
>gb|CV239848.1|CV239848 WS0233.B21_K12 PT-MB-A-13 Populus trichocarpa cDNA clone WS0233_K12
3', mRNA sequence
Length = 687
Score = 119 bits (255), Expect(2) = 2e-029
Identities = 55/119 (46%), Positives = 72/119 (60%)
Frame = -1 / -2
Query: 524 ASNTSSTSFGAMVAIDDPLTTGPTRAAGTEVGRAQGTYTFADQQTFGLLMVMDFVFTAGE 345
A + +S + +++ D T + +GRAQG Y A Q+ LLM M+FVF G+
Sbjct: 557 APSNTSATLFGSISMIDDPLTEKPELSSKLIGRAQGFYGSAGQEETALLMAMNFVFLQGK 378
Query: 344 HKGSTLSILGRXEVLSDVREMSIVGGSGKFRMARGYVQAHTIDSGFKSGETVVQYTVNV 168
+ GST+SILGR V S VREM ++GGSG FR ARGY QA T KSG+ VV+Y V V
Sbjct: 377 YNGSTISILGRNHVFSKVREMPVIGGSGLFRFARGYAQASTHSFDLKSGDAVVEYNVYV 201
Score = 30.9 bits (61), Expect(2) = 2e-029
Identities = 10/31 (32%), Positives = 22/31 (70%)
Frame = -1 / -2
Query: 599 TTFKVFFHDIVAGTSPTAIRIAQGAASNTSS 507
T F+V++HDI + +PTA+ I + ++ +++
Sbjct: 626 THFRVYWHDIYSAPNPTAMPIVRAPSNTSAT 534
>gb|DT486994.1|DT486994 WS02532.B21_H24 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02532_H24 3', mRNA sequence
Length = 672
Score = 119 bits (255), Expect(2) = 2e-029
Identities = 55/119 (46%), Positives = 72/119 (60%)
Frame = -1 / -1
Query: 524 ASNTSSTSFGAMVAIDDPLTTGPTRAAGTEVGRAQGTYTFADQQTFGLLMVMDFVFTAGE 345
A + +S + +++ D T + +GRAQG Y A Q+ LLM M+FVF G+
Sbjct: 537 APSNTSATLFGSISMIDDPLTEKPELSSKLIGRAQGFYGSAGQEETALLMAMNFVFLQGK 358
Query: 344 HKGSTLSILGRXEVLSDVREMSIVGGSGKFRMARGYVQAHTIDSGFKSGETVVQYTVNV 168
+ GST+SILGR V S VREM ++GGSG FR ARGY QA T KSG+ VV+Y V V
Sbjct: 357 YNGSTISILGRNHVFSKVREMPVIGGSGLFRFARGYAQASTHSFDLKSGDAVVEYNVYV 181
Score = 30.9 bits (61), Expect(2) = 2e-029
Identities = 10/31 (32%), Positives = 22/31 (70%)
Frame = -1 / -1
Query: 599 TTFKVFFHDIVAGTSPTAIRIAQGAASNTSS 507
T F+V++HDI + +PTA+ I + ++ +++
Sbjct: 606 THFRVYWHDIYSAPNPTAMPIVRAPSNTSAT 514
>gb|CV259409.1|CV259409 WS02011.B21_E13 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02011_E13 3', mRNA sequence
Length = 669
Score = 119 bits (255), Expect(2) = 2e-029
Identities = 55/119 (46%), Positives = 72/119 (60%)
Frame = -1 / -1
Query: 524 ASNTSSTSFGAMVAIDDPLTTGPTRAAGTEVGRAQGTYTFADQQTFGLLMVMDFVFTAGE 345
A + +S + +++ D T + +GRAQG Y A Q+ LLM M+FVF G+
Sbjct: 537 APSNTSATLFGSISMIDDPLTEKPELSSKLIGRAQGFYGSAGQEETALLMAMNFVFLQGK 358
Query: 344 HKGSTLSILGRXEVLSDVREMSIVGGSGKFRMARGYVQAHTIDSGFKSGETVVQYTVNV 168
+ GST+SILGR V S VREM ++GGSG FR ARGY QA T KSG+ VV+Y V V
Sbjct: 357 YNGSTISILGRNHVFSKVREMPVIGGSGLFRFARGYAQASTHSFDLKSGDAVVEYNVYV 181
Score = 30.9 bits (61), Expect(2) = 2e-029
Identities = 10/31 (32%), Positives = 22/31 (70%)
Frame = -1 / -1
Query: 599 TTFKVFFHDIVAGTSPTAIRIAQGAASNTSS 507
T F+V++HDI + +PTA+ I + ++ +++
Sbjct: 606 THFRVYWHDIYSAPNPTAMPIVRAPSNTSAT 514
>gb|DT478872.1|DT478872 WS02524.BR_A19 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02524_A19 5', mRNA sequence
Length = 653
Score = 119 bits (255), Expect(2) = 2e-029
Identities = 55/119 (46%), Positives = 72/119 (60%)
Frame = -1 / +1
Query: 524 ASNTSSTSFGAMVAIDDPLTTGPTRAAGTEVGRAQGTYTFADQQTFGLLMVMDFVFTAGE 345
A + +S + +++ D T + +GRAQG Y A Q+ LLM M+FVF G+
Sbjct: 136 APSNTSATLFGSISMIDDPLTEKPELSSKLIGRAQGFYGSAGQEETALLMAMNFVFLQGK 315
Query: 344 HKGSTLSILGRXEVLSDVREMSIVGGSGKFRMARGYVQAHTIDSGFKSGETVVQYTVNV 168
+ GST+SILGR V S VREM ++GGSG FR ARGY QA T KSG+ VV+Y V V
Sbjct: 316 YNGSTISILGRNHVFSKVREMPVIGGSGLFRFARGYAQASTHSFDLKSGDAVVEYNVYV 492
Score = 30.9 bits (61), Expect(2) = 2e-029
Identities = 10/31 (32%), Positives = 22/31 (70%)
Frame = -1 / +1
Query: 599 TTFKVFFHDIVAGTSPTAIRIAQGAASNTSS 507
T F+V++HDI + +PTA+ I + ++ +++
Sbjct: 67 THFRVYWHDIYSAPNPTAMPIVRAPSNTSAT 159
>gb|DT492173.1|DT492173 WS02549.C21_N17 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02549_N17 3', mRNA sequence
Length = 653
Score = 119 bits (255), Expect(2) = 2e-029
Identities = 55/119 (46%), Positives = 72/119 (60%)
Frame = -1 / -3
Query: 524 ASNTSSTSFGAMVAIDDPLTTGPTRAAGTEVGRAQGTYTFADQQTFGLLMVMDFVFTAGE 345
A + +S + +++ D T + +GRAQG Y A Q+ LLM M+FVF G+
Sbjct: 537 APSNTSATLFGSISMIDDPLTEKPELSSKLIGRAQGFYGSAGQEETALLMAMNFVFLQGK 358
Query: 344 HKGSTLSILGRXEVLSDVREMSIVGGSGKFRMARGYVQAHTIDSGFKSGETVVQYTVNV 168
+ GST+SILGR V S VREM ++GGSG FR ARGY QA T KSG+ VV+Y V V
Sbjct: 357 YNGSTISILGRNHVFSKVREMPVIGGSGLFRFARGYAQASTHSFDLKSGDAVVEYNVYV 181
Score = 30.9 bits (61), Expect(2) = 2e-029
Identities = 10/31 (32%), Positives = 22/31 (70%)
Frame = -1 / -3
Query: 599 TTFKVFFHDIVAGTSPTAIRIAQGAASNTSS 507
T F+V++HDI + +PTA+ I + ++ +++
Sbjct: 606 THFRVYWHDIYSAPNPTAMPIVRAPSNTSAT 514
>gb|CV231359.1|CV231359 WS0194.B21_E22 PT-DX-N-A-10 Populus trichocarpa cDNA clone
WS0194_E22 3', mRNA sequence
Length = 634
Score = 119 bits (255), Expect(2) = 2e-029
Identities = 55/119 (46%), Positives = 72/119 (60%)
Frame = -1 / -1
Query: 524 ASNTSSTSFGAMVAIDDPLTTGPTRAAGTEVGRAQGTYTFADQQTFGLLMVMDFVFTAGE 345
A + +S + +++ D T + +GRAQG Y A Q+ LLM M+FVF G+
Sbjct: 427 APSNTSATLFGSISMIDDPLTEKPELSSKLIGRAQGFYGSAGQEETALLMAMNFVFLQGK 248
Query: 344 HKGSTLSILGRXEVLSDVREMSIVGGSGKFRMARGYVQAHTIDSGFKSGETVVQYTVNV 168
+ GST+SILGR V S VREM ++GGSG FR ARGY QA T KSG+ VV+Y V V
Sbjct: 247 YNGSTISILGRNHVFSKVREMPVIGGSGLFRFARGYAQASTHSFDLKSGDAVVEYNVYV 71
Score = 30.9 bits (61), Expect(2) = 2e-029
Identities = 10/31 (32%), Positives = 22/31 (70%)
Frame = -1 / -1
Query: 599 TTFKVFFHDIVAGTSPTAIRIAQGAASNTSS 507
T F+V++HDI + +PTA+ I + ++ +++
Sbjct: 496 THFRVYWHDIYSAPNPTAMPIVRAPSNTSAT 404
>gb|BU878912.1|BU878912 V053D04 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 631
Score = 119 bits (255), Expect(2) = 2e-029
Identities = 55/119 (46%), Positives = 72/119 (60%)
Frame = -1 / +3
Query: 524 ASNTSSTSFGAMVAIDDPLTTGPTRAAGTEVGRAQGTYTFADQQTFGLLMVMDFVFTAGE 345
A + +S + +++ D T + +GRAQG Y A Q+ LLM M+FVF G+
Sbjct: 231 APSNTSATLFGSISMIDDPLTEKPELSSKLIGRAQGFYGSAGQEETALLMAMNFVFLQGK 410
Query: 344 HKGSTLSILGRXEVLSDVREMSIVGGSGKFRMARGYVQAHTIDSGFKSGETVVQYTVNV 168
+ GST+SILGR V S VREM ++GGSG FR ARGY QA T KSG+ VV+Y V V
Sbjct: 411 YNGSTISILGRNHVFSKVREMPVIGGSGLFRFARGYAQASTHSFDLKSGDAVVEYNVYV 587
Score = 30.9 bits (61), Expect(2) = 2e-029
Identities = 10/31 (32%), Positives = 22/31 (70%)
Frame = -1 / +3
Query: 599 TTFKVFFHDIVAGTSPTAIRIAQGAASNTSS 507
T F+V++HDI + +PTA+ I + ++ +++
Sbjct: 162 THFRVYWHDIYSAPNPTAMPIVRAPSNTSAT 254
>gb|CV239536.1|CV239536 WS0232.B21_L15 PT-MB-A-13 Populus trichocarpa cDNA clone WS0232_L15
3', mRNA sequence
Length = 580
Score = 119 bits (255), Expect(2) = 2e-029
Identities = 55/119 (46%), Positives = 72/119 (60%)
Frame = -1 / -1
Query: 524 ASNTSSTSFGAMVAIDDPLTTGPTRAAGTEVGRAQGTYTFADQQTFGLLMVMDFVFTAGE 345
A + +S + +++ D T + +GRAQG Y A Q+ LLM M+FVF G+
Sbjct: 445 APSNTSATLFGSISMIDDPLTEKPELSSKLIGRAQGFYGSAGQEETALLMAMNFVFLQGK 266
Query: 344 HKGSTLSILGRXEVLSDVREMSIVGGSGKFRMARGYVQAHTIDSGFKSGETVVQYTVNV 168
+ GST+SILGR V S VREM ++GGSG FR ARGY QA T KSG+ VV+Y V V
Sbjct: 265 YNGSTISILGRNHVFSKVREMPVIGGSGLFRFARGYAQASTHSFDLKSGDAVVEYNVYV 89
Score = 30.9 bits (61), Expect(2) = 2e-029
Identities = 10/31 (32%), Positives = 22/31 (70%)
Frame = -1 / -1
Query: 599 TTFKVFFHDIVAGTSPTAIRIAQGAASNTSS 507
T F+V++HDI + +PTA+ I + ++ +++
Sbjct: 514 THFRVYWHDIYSAPNPTAMPIVRAPSNTSAT 422
>gb|CV273763.1|CV273763 WS01712.B21_B10 PTxD-NR-A-8 Populus trichocarpa x Populus deltoides
cDNA clone WS01712_B10 3', mRNA sequence
Length = 775
Score = 119 bits (254), Expect(2) = 2e-029
Identities = 54/117 (46%), Positives = 72/117 (61%)
Frame = -1 / -3
Query: 518 NTSSTSFGAMVAIDDPLTTGPTRAAGTEVGRAQGTYTFADQQTFGLLMVMDFVFTAGEHK 339
+ +S + +++ D T + +GRAQG Y A Q+ LLM M+FVF G++
Sbjct: 536 SNTSATLFGSISMIDDPLTEKPELSSKLIGRAQGFYGSAGQEETALLMAMNFVFLQGKYN 357
Query: 338 GSTLSILGRXEVLSDVREMSIVGGSGKFRMARGYVQAHTIDSGFKSGETVVQYTVNV 168
GST+SILGR +V S VREM ++GGSG FR ARGY QA T KSG+ VV+Y V V
Sbjct: 356 GSTISILGRNQVFSKVREMPVIGGSGLFRFARGYAQASTHSFDLKSGDAVVEYNVYV 186
Score = 30.9 bits (61), Expect(2) = 2e-029
Identities = 10/31 (32%), Positives = 22/31 (70%)
Frame = -1 / -3
Query: 599 TTFKVFFHDIVAGTSPTAIRIAQGAASNTSS 507
T F+V++HDI + +PTA+ I + ++ +++
Sbjct: 611 THFRVYWHDIYSAPNPTAMPIVRSPSNTSAT 519
>gb|DT488095.1|DT488095 WS02535.B21_H24 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02535_H24 3', mRNA sequence
Length = 836
Score = 114 bits (243), Expect(2) = 3e-029
Identities = 48/89 (53%), Positives = 60/89 (67%)
Frame = -1 / -2
Query: 434 VGRAQGTYTFADQQTFGLLMVMDFVFTAGEHKGSTLSILGRXEVLSDVREMSIVGGSGKF 255
VGRAQG Y A QQ GLLM M+F F G++ GST+++LG+ V S VREM ++GGSG F
Sbjct: 532 VGRAQGLYAQASQQDIGLLMAMNFAFIEGKYNGSTITVLGKNAVFSTVREMPVIGGSGLF 353
Query: 254 RMARGYVQAHTIDSGFKSGETVVQYTVNV 168
R ARGYVQA T +G+ V+Y V V
Sbjct: 352 RFARGYVQARTHKLDMATGDATVEYNVYV 266
Score = 35.4 bits (71), Expect(2) = 3e-029
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = -1 / -2
Query: 521 SNTSSTSFGAMVAIDDPLTTGP 456
SNTS T+FG + ID+PLT GP
Sbjct: 616 SNTSRTAFGLVRMIDNPLTLGP 551
>gb|CV252840.1|CV252840 PX0019.B21.1_C23 PT-X-FL-A-1 Populus trichocarpa cDNA clone
PX0019_C23 3', mRNA sequence
Length = 720
Score = 114 bits (243), Expect(2) = 3e-029
Identities = 48/89 (53%), Positives = 60/89 (67%)
Frame = -1 / -3
Query: 434 VGRAQGTYTFADQQTFGLLMVMDFVFTAGEHKGSTLSILGRXEVLSDVREMSIVGGSGKF 255
VGRAQG Y A QQ GLLM M+F F G++ GST+++LG+ V S VREM ++GGSG F
Sbjct: 493 VGRAQGLYAQASQQDIGLLMAMNFAFIEGKYNGSTITVLGKNAVFSTVREMPVIGGSGLF 314
Query: 254 RMARGYVQAHTIDSGFKSGETVVQYTVNV 168
R ARGYVQA T +G+ V+Y V V
Sbjct: 313 RFARGYVQARTHKLDMATGDATVEYNVYV 227
Score = 35.4 bits (71), Expect(2) = 3e-029
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = -1 / -3
Query: 521 SNTSSTSFGAMVAIDDPLTTGP 456
SNTS T+FG + ID+PLT GP
Sbjct: 577 SNTSRTAFGLVRMIDNPLTLGP 512
>gb|CF237334.1|CF237334 Ptajxtjxt4H12H1216 Poplar cDNA library from young tension xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 718
Score = 115 bits (246), Expect(2) = 3e-029
Identities = 49/89 (55%), Positives = 61/89 (68%)
Frame = -1 / +2
Query: 434 VGRAQGTYTFADQQTFGLLMVMDFVFTAGEHKGSTLSILGRXEVLSDVREMSIVGGSGKF 255
VG+AQG Y A QQ GLLM M+F F G++ GST+++LGR EV S VREM ++GGSG F
Sbjct: 371 VGKAQGFYAQASQQDLGLLMAMNFAFIEGKYNGSTITVLGRNEVFSTVREMPVIGGSGLF 550
Query: 254 RMARGYVQAHTIDSGFKSGETVVQYTVNV 168
ARGYVQA T K+G+ V+Y V V
Sbjct: 551 XFARGYVQARTHMVDLKTGDATVEYNVYV 637
Score = 34.1 bits (68), Expect(2) = 3e-029
Identities = 16/35 (45%), Positives = 19/35 (54%)
Frame = -1 / +2
Query: 560 TSPTAIRIAQGAASNTSSTSFGAMVAIDDPLTTGP 456
T P I NTS T+FG + ID+PLT GP
Sbjct: 248 TGPNPSSIQVVPPLNTSITAFGLVRMIDNPLTLGP 352
>gb|CV230414.1|CV230414 WS01916.B21_H11 PT-DX-N-A-10 Populus trichocarpa cDNA clone
WS01916_H11 3', mRNA sequence
Length = 719
Score = 114 bits (243), Expect(2) = 3e-029
Identities = 48/89 (53%), Positives = 60/89 (67%)
Frame = -1 / -3
Query: 434 VGRAQGTYTFADQQTFGLLMVMDFVFTAGEHKGSTLSILGRXEVLSDVREMSIVGGSGKF 255
VGRAQG Y A QQ GLLM M+F F G++ GST+++LG+ V S VREM ++GGSG F
Sbjct: 495 VGRAQGLYAQASQQDIGLLMAMNFAFIEGKYNGSTITVLGKNAVFSTVREMPVIGGSGLF 316
Query: 254 RMARGYVQAHTIDSGFKSGETVVQYTVNV 168
R ARGYVQA T +G+ V+Y V V
Sbjct: 315 RFARGYVQARTHKLDMATGDATVEYNVYV 229
Score = 35.4 bits (71), Expect(2) = 3e-029
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = -1 / -3
Query: 521 SNTSSTSFGAMVAIDDPLTTGP 456
SNTS T+FG + ID+PLT GP
Sbjct: 579 SNTSRTAFGLVRMIDNPLTLGP 514
>gb|CV251260.1|CV251260 WS0116.B21_G06 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS0116_G06 3', mRNA sequence
Length = 719
Score = 114 bits (243), Expect(2) = 3e-029
Identities = 48/89 (53%), Positives = 60/89 (67%)
Frame = -1 / -2
Query: 434 VGRAQGTYTFADQQTFGLLMVMDFVFTAGEHKGSTLSILGRXEVLSDVREMSIVGGSGKF 255
VGRAQG Y A QQ GLLM M+F F G++ GST+++LG+ V S VREM ++GGSG F
Sbjct: 493 VGRAQGLYAQASQQDIGLLMAMNFAFIEGKYNGSTITVLGKNAVFSTVREMPVIGGSGLF 314
Query: 254 RMARGYVQAHTIDSGFKSGETVVQYTVNV 168
R ARGYVQA T +G+ V+Y V V
Sbjct: 313 RFARGYVQARTHKLDMATGDATVEYNVYV 227
Score = 35.4 bits (71), Expect(2) = 3e-029
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = -1 / -2
Query: 521 SNTSSTSFGAMVAIDDPLTTGP 456
SNTS T+FG + ID+PLT GP
Sbjct: 577 SNTSRTAFGLVRMIDNPLTLGP 512
>gb|CV252932.1|CV252932 PX0019.B21.1_I21 PT-X-FL-A-1 Populus trichocarpa cDNA clone
PX0019_I21 3', mRNA sequence
Length = 719
Score = 114 bits (243), Expect(2) = 3e-029
Identities = 48/89 (53%), Positives = 60/89 (67%)
Frame = -1 / -2
Query: 434 VGRAQGTYTFADQQTFGLLMVMDFVFTAGEHKGSTLSILGRXEVLSDVREMSIVGGSGKF 255
VGRAQG Y A QQ GLLM M+F F G++ GST+++LG+ V S VREM ++GGSG F
Sbjct: 493 VGRAQGLYAQASQQDIGLLMAMNFAFIEGKYNGSTITVLGKNAVFSTVREMPVIGGSGLF 314
Query: 254 RMARGYVQAHTIDSGFKSGETVVQYTVNV 168
R ARGYVQA T +G+ V+Y V V
Sbjct: 313 RFARGYVQARTHKLDMATGDATVEYNVYV 227
Score = 35.4 bits (71), Expect(2) = 3e-029
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = -1 / -2
Query: 521 SNTSSTSFGAMVAIDDPLTTGP 456
SNTS T+FG + ID+PLT GP
Sbjct: 577 SNTSRTAFGLVRMIDNPLTLGP 512
>gb|CX658695.1|CX658695 PO01021B02 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO01021B02 5', mRNA sequence
Length = 657
Score = 115 bits (246), Expect(2) = 3e-029
Identities = 49/89 (55%), Positives = 61/89 (68%)
Frame = -1 / +2
Query: 434 VGRAQGTYTFADQQTFGLLMVMDFVFTAGEHKGSTLSILGRXEVLSDVREMSIVGGSGKF 255
VG+AQG Y A QQ GLLM M+ F G++ GST+++LGR EV S VREM ++GGSG F
Sbjct: 347 VGKAQGFYAQASQQDLGLLMAMNLAFIEGKYNGSTITVLGRNEVFSTVREMPVIGGSGLF 526
Query: 254 RMARGYVQAHTIDSGFKSGETVVQYTVNV 168
R ARGYVQA T K+G+ V+Y V V
Sbjct: 527 RFARGYVQARTHMVDLKTGDATVEYNVYV 613
Score = 34.1 bits (68), Expect(2) = 3e-029
Identities = 16/35 (45%), Positives = 19/35 (54%)
Frame = -1 / +2
Query: 560 TSPTAIRIAQGAASNTSSTSFGAMVAIDDPLTTGP 456
T P I NTS T+FG + ID+PLT GP
Sbjct: 224 TGPNPSSIQVVPPLNTSITAFGLVRMIDNPLTLGP 328
>gb|DT498798.1|DT498798 WS0116.BR_G06 PT-P-FL-A-2 Populus trichocarpa cDNA clone WS0116_G06
5', mRNA sequence
Length = 659
Score = 114 bits (243), Expect(2) = 3e-029
Identities = 48/89 (53%), Positives = 60/89 (67%)
Frame = -1 / +3
Query: 434 VGRAQGTYTFADQQTFGLLMVMDFVFTAGEHKGSTLSILGRXEVLSDVREMSIVGGSGKF 255
VGRAQG Y A QQ GLLM M+F F G++ GST+++LG+ V S VREM ++GGSG F
Sbjct: 390 VGRAQGLYAQASQQDIGLLMAMNFAFIEGKYNGSTITVLGKNAVFSTVREMPVIGGSGLF 569
Query: 254 RMARGYVQAHTIDSGFKSGETVVQYTVNV 168
R ARGYVQA T +G+ V+Y V V
Sbjct: 570 RFARGYVQARTHKLDMATGDATVEYNVYV 656
Score = 35.4 bits (71), Expect(2) = 3e-029
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = -1 / +3
Query: 521 SNTSSTSFGAMVAIDDPLTTGP 456
SNTS T+FG + ID+PLT GP
Sbjct: 306 SNTSRTAFGLVRMIDNPLTLGP 371
>gb|CV232949.1|CV232949 WS0199.B21_C20 PT-DX-N-A-10 Populus trichocarpa cDNA clone
WS0199_C20 3', mRNA sequence
Length = 615
Score = 114 bits (243), Expect(2) = 3e-029
Identities = 48/89 (53%), Positives = 60/89 (67%)
Frame = -1 / -1
Query: 434 VGRAQGTYTFADQQTFGLLMVMDFVFTAGEHKGSTLSILGRXEVLSDVREMSIVGGSGKF 255
VGRAQG Y A QQ GLLM M+F F G++ GST+++LG+ V S VREM ++GGSG F
Sbjct: 495 VGRAQGLYAQASQQDIGLLMAMNFAFIEGKYNGSTITVLGKNAVFSTVREMPVIGGSGLF 316
Query: 254 RMARGYVQAHTIDSGFKSGETVVQYTVNV 168
R ARGYVQA T +G+ V+Y V V
Sbjct: 315 RFARGYVQARTHKLDMATGDATVEYNVYV 229
Score = 35.4 bits (71), Expect(2) = 3e-029
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = -1 / -1
Query: 521 SNTSSTSFGAMVAIDDPLTTGP 456
SNTS T+FG + ID+PLT GP
Sbjct: 579 SNTSRTAFGLVRMIDNPLTLGP 514
>gb|BU882625.1|BU882625 UM80TB12 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 596
Score = 118 bits (253), Expect(2) = 3e-029
Identities = 54/117 (46%), Positives = 71/117 (60%)
Frame = -1 / +2
Query: 524 ASNTSSTSFGAMVAIDDPLTTGPTRAAGTEVGRAQGTYTFADQQTFGLLMVMDFVFTAGE 345
A + +S + +++ D T + +GRAQG Y A Q+ LLM M+FVF G+
Sbjct: 242 APSNTSATLFGSISMIDDPLTEKPELSSKLIGRAQGFYGSAGQEETALLMAMNFVFLQGK 421
Query: 344 HKGSTLSILGRXEVLSDVREMSIVGGSGKFRMARGYVQAHTIDSGFKSGETVVQYTV 174
+ GST+SILGR V S VREM ++GGSG FR ARGY QA T KSG+ VV+Y V
Sbjct: 422 YNGSTISILGRNHVFSKVREMPVIGGSGLFRFARGYAQASTHSFDLKSGDAVVEYNV 592
Score = 30.9 bits (61), Expect(2) = 3e-029
Identities = 10/31 (32%), Positives = 22/31 (70%)
Frame = -1 / +2
Query: 599 TTFKVFFHDIVAGTSPTAIRIAQGAASNTSS 507
T F+V++HDI + +PTA+ I + ++ +++
Sbjct: 173 THFRVYWHDIYSAPNPTAMPIVRAPSNTSAT 265
>gb|CV256225.1|CV256225 WS0243.B21_E12 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS0243_E12 3', mRNA sequence
Length = 833
Score = 114 bits (244), Expect(2) = 6e-029
Identities = 49/89 (55%), Positives = 61/89 (68%)
Frame = -1 / -1
Query: 434 VGRAQGTYTFADQQTFGLLMVMDFVFTAGEHKGSTLSILGRXEVLSDVREMSIVGGSGKF 255
VG+AQ Y A QQ GLLM M+F F G++ GST+++LGR EV S VREM ++GGSG F
Sbjct: 473 VGKAQRFYAQASQQDLGLLMAMNFAFIEGKYNGSTITVLGRNEVFSTVREMPVIGGSGLF 294
Query: 254 RMARGYVQAHTIDSGFKSGETVVQYTVNV 168
R ARGYVQA T K+G+ V+Y V V
Sbjct: 293 RFARGYVQARTHMVDLKTGDATVEYNVYV 207
Score = 34.1 bits (68), Expect(2) = 6e-029
Identities = 16/35 (45%), Positives = 19/35 (54%)
Frame = -1 / -1
Query: 560 TSPTAIRIAQGAASNTSSTSFGAMVAIDDPLTTGP 456
T P I NTS T+FG + ID+PLT GP
Sbjct: 596 TGPNPSSIQVVPPLNTSITAFGLVRMIDNPLTLGP 492
Database: Populus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:49 PM
Number of letters in database: 203,408,664
Number of sequences in database: 369,679
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 482,322,396
Number of Sequences: 369679
Number of extensions: 5558540
Number of successful extensions: 28212
Number of sequences better than 1.0e-020: 109
length of database: 67,802,888
effective HSP length: 54
effective length of database: 47,840,222
effective search space used: 20475615016
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)