TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3230260.2.1
(863 letters)
Database: Populus_nucl_with_EST.fasta
369,679 sequences; 203,408,664 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|DT520028.1|DT520028 WS02446.B21.1_G01 PTxD-ICC-N-A-14 Po... 247 7e-065
gb|CV279266.1|CV279266 WS0148.B21_P15 PTxD-IL-A-5 Populus t... 237 5e-062
gb|CV260852.1|CV260852 WS02015.B21_C22 PTxN-IB-N-A-11 Popul... 201 9e-056
gb|DN491423.1|DN491423 UR101TA06.3pR Populus root cDNA libr... 209 2e-053
gb|DV466026.1|DV466026 MTUNUL1.P46.D03 NUL Populus fremonti... 209 3e-053
gb|CV263391.1|CV263391 WS02021.B21_F18 PTxN-IB-N-A-11 Popul... 177 1e-051
gb|DV465619.1|DV465619 MTUNUL1.P40.H09 NUL Populus fremonti... 177 9e-044
gb|DN489752.1|DN489752 T076A08.3pR Populus shoot meristem c... 175 3e-043
gb|CV265927.1|CV265927 WS02028.B21_K07 PTxN-IB-N-A-11 Popul... 141 6e-041
gb|CV236684.1|CV236684 WS01225.B21.1_A06 PT-GT-FL-A-3 Popul... 139 2e-032
gb|CV236829.1|CV236829 WS01225.B21.1_K06 PT-GT-FL-A-3 Popul... 139 2e-032
gb|CV266528.1|CV266528 WS0203.B21_E12 PTxN-IB-N-A-11 Populu... 139 2e-032
gb|CV234645.1|CV234645 WS01215.B21.1_L03 PT-GT-FL-A-3 Popul... 138 3e-032
gb|CN524508.1|CN524508 GQ015M13.T3_B12 GQ015 Populus tricho... 138 5e-032
gb|CV281862.1|CV281862 WS0183.B21_B01 PTxD-IL-N-A-9 Populus... 138 5e-032
emb|AJ224986.1|PTR224986 Populus trichocarpa mRNA for cinna... 138 5e-032
gb|AY479973.1| Populus tomentosa cinnamoyl CoA reductase mR... 137 1e-031
gb|AF217958.1| Populus tremuloides cinnamoyl CoA reductase ... 136 2e-031
gb|BU878087.1|BU878087 V043A04 Populus flower cDNA library ... 134 8e-031
gb|CX177347.1|CX177347 G06_45-77_14.ab1 leaf inoculated wit... 133 1e-030
gb|DT472073.1|DT472073 WS01225.BR.1_A06 PT-GT-FL-A-3 Populu... 133 2e-030
gb|DV466667.1|DV466667 MTUNUL1.P8.F08 NUL Populus fremontii... 133 2e-030
gb|DN490760.1|DN490760 UL83TE05.3pR Populus cold stressed l... 132 3e-030
gb|AJ770080.1|AJ770080 AJ770080 Populus euphratica leaf 3-6... 132 4e-030
gb|DT472319.1|DT472319 WS01225.BR_K06 PT-GT-FL-A-3 Populus ... 131 7e-030
gb|AJ769009.1|AJ769009 AJ769009 Populus euphratica leaf adu... 127 7e-029
gb|AJ769020.1|AJ769020 AJ769020 Populus euphratica leaf adu... 126 2e-028
gb|AJ778774.1|AJ778774 AJ778774 Populus euphratica cambium ... 124 6e-028
gb|AJ768870.1|AJ768870 AJ768870 Populus euphratica leaf adu... 123 1e-027
gb|BU836323.1|BU836323 T085A10 Populus apical shoot cDNA li... 123 2e-027
gb|AJ780841.1|AJ780841 AJ780841 Populus euphratica leaf 3-6... 123 2e-027
gb|CK318210.1|CK318210 B9P06g01 Populus stem seasonal libra... 122 2e-027
gb|DV464242.1|DV464242 MTUNUL1.P25.A01 NUL Populus fremonti... 122 2e-027
gb|AJ780609.1|AJ780609 AJ780609 Populus euphratica leaf 3-6... 122 3e-027
gb|AJ779719.1|AJ779719 AJ779719 Populus euphratica root 3-6... 120 1e-026
gb|CV273681.1|CV273681 WS01711.B21_N04 PTxD-NR-A-8 Populus ... 120 1e-026
gb|DT512017.1|DT512017 WS02418.B21_C02 PTxD-ICC-N-A-14 Popu... 120 1e-026
gb|CV245139.1|CV245139 WS0256.B21_J10 PT-MB-N-A-15 Populus ... 83 2e-026
gb|CX658554.1|CX658554 PO01036D06 Poplar SC cDNA library Po... 91 3e-026
emb|AJ295838.1|PTR295838 Populus balsamifera subsp. trichoc... 112 7e-026
gb|CV242405.1|CV242405 WS02514.B21.1_P14 PT-MB-N-A-15 Popul... 81 1e-025
gb|CV276161.1|CV276161 WS0178.B21.1_N12 PTxD-NR-A-8 Populus... 86 1e-025
gb|DT492194.1|DT492194 WS02549.C21_O15 PT-MB-N-A-15 Populus... 86 1e-025
gb|CV237437.1|CV237437 WS01227.B21.1_P20 PT-GT-FL-A-3 Popul... 86 1e-025
gb|BU811708.1|BU811708 UL87TD06 Populus leaf cDNA library P... 116 1e-025
gb|AJ779812.1|AJ779812 AJ779812 Populus euphratica root 3-6... 116 1e-025
gb|DV463065.1|DV463065 MTUNUL1.P11.C04 NUL Populus fremonti... 116 1e-025
gb|DT488885.1|DT488885 WS02537.B21_L11 PT-MB-N-A-15 Populus... 81 1e-025
gb|DT480386.1|DT480386 WS02528.BR_M02 PT-MB-N-A-15 Populus ... 91 2e-025
gb|CX178853.1|CX178853 D05_45-4_07.ab1 leaf inoculated with... 116 3e-025
gb|DT490964.1|DT490964 WS02546.C21.1_H02 PT-MB-N-A-15 Popul... 115 5e-025
gb|CK092035.1|CK092035 G063P24.3pR Populus tension wood cDN... 89 5e-025
gb|DN488870.1|DN488870 S042G10.3pR Populus imbibed seed cDN... 114 9e-025
gb|DT484440.1|DT484440 WS02525.B21_G20 PT-MB-N-A-15 Populus... 112 2e-024
gb|CV249027.1|CV249027 WS01122.B21_M15 PT-P-FL-A-2 Populus ... 112 3e-024
gb|CF231192.1|CF231192 PtaC0018E12E1210 Poplar cDNA library... 111 5e-024
gb|CN520573.1|CN520573 GQ0105.B3_E09 GQ010 Populus trichoca... 111 5e-024
gb|DT518419.1|DT518419 WS02438.B21_B12 PTxD-ICC-N-A-14 Popu... 111 9e-024
gb|BU890711.1|BU890711 P040F11 Populus petioles cDNA librar... 110 2e-023
gb|CV245418.1|CV245418 WS0257.B21_F20 PT-MB-N-A-15 Populus ... 77 3e-023
gb|CX176766.1|CX176766 D03_69-3_07.ab1 leaf inoculated with... 86 3e-023
gb|DV466303.1|DV466303 MTUNUL1.P49.H04 NUL Populus fremonti... 108 4e-023
gb|DT517212.1|DT517212 WS02433.B21_K06 PTxD-ICC-N-A-14 Popu... 107 8e-023
gb|CX173686.1|CX173686 E12_re-69-17_10.ab1 leaf inoculated ... 82 4e-022
gb|CV234726.1|CV234726 WS01215.B21.1_P22 PT-GT-FL-A-3 Popul... 105 5e-022
gb|CV246918.1|CV246918 WS01116.B21_G14 PT-P-FL-A-2 Populus ... 105 5e-022
gb|CX171591.1|CX171591 B05_69-93_03.ab1 leaf inoculated wit... 81 1e-021
gb|CK095802.1|CK095802 UA29DPE05.3pR Populus dormant cambiu... 103 1e-021
gb|DN501437.1|DN501437 UR101TA06.5pR Populus root cDNA libr... 101 5e-021
gb|DT496222.1|DT496222 WS01122.BR_M15 PT-P-FL-A-2 Populus t... 101 5e-021
gb|CV260168.1|CV260168 WS02013.B21_F14 PTxN-IB-N-A-11 Popul... 59 5e-021
>gb|DT520028.1|DT520028 WS02446.B21.1_G01 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02446_G01 3', mRNA sequence
Length = 838
Score = 247 bits (534), Expect = 7e-065
Identities = 104/209 (49%), Positives = 139/209 (66%)
Frame = -2 / -1
Query: 862 KACYEAKAKRXXXXXXXXXVFNNPDWPKGEAFTEDSWSDGEYCRKNEEWYFLSKTLAEHE 683
+AC EAK KR V NP PKG+ E+ WSD EYCR + WY LSKT AE E
Sbjct: 790 RACDEAKVKRVVIVSSMVAVCMNPSLPKGQVMDENWWSDKEYCRATKNWYCLSKTEAESE 611
Query: 682 AFAYAAKTGLDIVTICPSLVIGPLLQPAVNTSVKVFLSYIKGDQEIVKDGPKNLVDVRDV 503
A+ A ++GLD+VTICPSL++GP+L AVN S KV + +K E +++ +NLVDVRDV
Sbjct: 610 AWECAKRSGLDVVTICPSLILGPILHSAVNASSKVLIKLLKEGYESLENKLRNLVDVRDV 431
Query: 502 AGALLLAYENLQASGRYLCSSPAIRVSDIVNILKTEYPTYTYPQKFVEAEGSNTYNTEKL 323
A ALLL YE +A GRY+C++ IR D+V L+ YP Y YP+ F E + ++EKL
Sbjct: 430 AEALLLVYEKPEAEGRYICTAHEIRTEDLVEKLRNIYPNYNYPKSFTEEDEGINLSSEKL 251
Query: 322 RKLGWTSRPMEDTLRDSIECYRAMGILN* 236
++LGW+ RP+E+TL DS+E Y+ GIL+*
Sbjct: 250 QRLGWSYRPLEETLIDSVESYQKTGILD* 164
Score = 110 bits (235), Expect = 1e-023
Identities = 67/184 (36%), Positives = 87/184 (47%)
Frame = +3 / +3
Query: 243 RMPIAL*HSMLSRRVSSMGLEVHPSFRSFSVLYVLLPSASTNF*G*VYVGYSVFSMFTIS 422
++P+ * S S RVSS G +HPS +FS L + S+S G*+ +GY + T S
Sbjct: 171 KIPVF**LSTESMRVSSSGR*LHPSLCNFSELRFIPSSSSVKLLG*L*LGYIFLNFSTKS 350
Query: 423 ETLIAGELQRYRPDACRFXXXXXXXXXXXXXXXXFLGXXXXXXXXXXXXXRKTLTLVFTA 602
LI+ + Y P A F F +TL L FTA
Sbjct: 351 SVLIS*AVHIYLPSASGFSYTKSSASATSRTSTRFRSLFSNDSYPSFKSLIRTLLLAFTA 530
Query: 603 GCNKGPITNDGQIVTMSSPVLAA*AKASCSANVLERKYHSSFFLQYSPSDQLSSVKASPL 782
C GP +GQIVT SSP+L A + AS SA+VL+R+Y LQYS SD S P
Sbjct: 531 ECRIGPKMREGQIVTTSSPLLFAHSHASLSASVLDRQYQFLVALQYSLSDHQFSSIT*PF 710
Query: 783 GQSG 794
G+ G
Sbjct: 711 GKLG 722
>gb|CV279266.1|CV279266 WS0148.B21_P15 PTxD-IL-A-5 Populus trichocarpa x Populus deltoides
cDNA clone WS0148_P15 3', mRNA sequence
Length = 764
Score = 237 bits (513), Expect = 5e-062
Identities = 97/187 (51%), Positives = 130/187 (69%)
Frame = -2 / -3
Query: 796 NPDWPKGEAFTEDSWSDGEYCRKNEEWYFLSKTLAEHEAFAYAAKTGLDIVTICPSLVIG 617
NP PKG+ E+ WSD EYCR + WY LSKT AE EA+ A ++GLD+VTICPSL++G
Sbjct: 723 NPSLPKGQVMDENWWSDKEYCRATKNWYCLSKTEAESEAWECAKRSGLDVVTICPSLILG 544
Query: 616 PLLQPAVNTSVKVFLSYIKGDQEIVKDGPKNLVDVRDVAGALLLAYENLQASGRYLCSSP 437
P+L AVN S KV + +K E +++ +NLVDVRDVA ALLL YE +A GRY+C++
Sbjct: 543 PILHSAVNASSKVLIKLLKEGHESLENKLRNLVDVRDVAEALLLVYEKPEAEGRYICTAH 364
Query: 436 AIRVSDIVNILKTEYPTYTYPQKFVEAEGSNTYNTEKLRKLGWTSRPMEDTLRDSIECYR 257
IR D+V L+ YP Y YP+ F E E ++EKL++LGW+ RP+E+TL DS+E Y+
Sbjct: 363 EIRTEDLVEKLRNIYPNYNYPKSFTEEEEGINLSSEKLQRLGWSYRPLEETLIDSVESYQ 184
Query: 256 AMGILN* 236
GIL+*
Sbjct: 183 KTGILD* 163
Score = 73.0 bits (153), Expect(2) = 9e-021
Identities = 37/73 (50%), Positives = 45/73 (61%)
Frame = +3 / +2
Query: 576 KTLTLVFTAGCNKGPITNDGQIVTMSSPVLAA*AKASCSANVLERKYHSSFFLQYSPSDQ 755
+TL L FTA C GP +GQIVT SSP+L A + AS SA+VL+R+Y LQYS SD
Sbjct: 503 RTLLLAFTAECRIGPKMREGQIVTTSSPLLFAHSHASLSASVLDRQYQFLVALQYSLSDH 682
Query: 756 LSSVKASPLGQSG 794
S P G+ G
Sbjct: 683 QFSSIT*PFGKLG 721
Score = 47.3 bits (97), Expect(2) = 9e-021
Identities = 30/95 (31%), Positives = 42/95 (44%)
Frame = +3 / +2
Query: 243 RMPIAL*HSMLSRRVSSMGLEVHPSFRSFSVLYVLLPSASTNF*G*VYVGYSVFSMFTIS 422
++P+ * S S RVSS G +HPS +FS L + S+S G*+ +GY + T S
Sbjct: 170 KIPVF**LSTESMRVSSSGR*LHPSLCNFSELRFIPSSSSVKLLG*L*LGYIFLNFSTKS 349
Query: 423 ETLIAGELQRYRPDACRFXXXXXXXXXXXXXXXXF 527
LI+ + Y P A F F
Sbjct: 350 SVLIS*AVHIYLPSASGFSYTKSSASATSRTSTRF 454
>gb|CV260852.1|CV260852 WS02015.B21_C22 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02015_C22 3', mRNA sequence
Length = 895
Score = 201 bits (434), Expect(2) = 9e-056
Identities = 83/164 (50%), Positives = 116/164 (70%)
Frame = -2 / -2
Query: 727 NEEWYFLSKTLAEHEAFAYAAKTGLDIVTICPSLVIGPLLQPAVNTSVKVFLSYIKGDQE 548
++ WY LSKT AE EA+ A ++GLD+VTICPSL++GP+L AVN S KV + +K E
Sbjct: 651 HQNWYCLSKTEAESEAWECAKRSGLDVVTICPSLILGPILHSAVNASSKVLIKLLKEGYE 472
Query: 547 IVKDGPKNLVDVRDVAGALLLAYENLQASGRYLCSSPAIRVSDIVNILKTEYPTYTYPQK 368
+++ +NLVDVRDVA ALLL YE +A GRY+C++ IR D+V L+ YP Y YP+
Sbjct: 471 SLENKLRNLVDVRDVAEALLLVYEKPEAEGRYICTAHEIRTEDLVEKLRNIYPNYNYPKS 292
Query: 367 FVEAEGSNTYNTEKLRKLGWTSRPMEDTLRDSIECYRAMGILN* 236
F + E ++EKL++LGW+ RP+E+TL DS+E Y+ GIL+*
Sbjct: 291 FTDEEEGINLSSEKLQRLGWSYRPLEETLIDSVESYQKTGILD* 160
Score = 38.6 bits (78), Expect(2) = 9e-056
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = -2 / -1
Query: 796 NPDWPKGEAFTEDSWSDGEYCR 731
NP PKG+ E+ WSD EYCR
Sbjct: 883 NPSLPKGQVMDENWWSDKEYCR 818
>gb|DN491423.1|DN491423 UR101TA06.3pR Populus root cDNA library Populus tremula x Populus
tremuloides cDNA clone UR101TA06 3', mRNA sequence
Length = 686
Score = 209 bits (451), Expect = 2e-053
Identities = 89/180 (49%), Positives = 113/180 (62%)
Frame = -2 / -2
Query: 781 KGEAFTEDSWSDGEYCRKNEEWYFLSKTLAEHEAFAYAAKTGLDIVTICPSLVIGPLLQP 602
K +A EDSWSD E+C+ NE+WYFL+KT AE EA Y L IVTICPS++IGPLLQP
Sbjct: 679 KDQAMNEDSWSDFEFCKANEQWYFLAKTKAEKEALEYGKTNELKIVTICPSIIIGPLLQP 500
Query: 601 AVNTSVKVFLSYIKGDQEIVKDGPKNLVDVRDVAGALLLAYENLQASGRYLCSSPAIRVS 422
+NTS LSY+K E + G ++ VDVRD A ALLL YE +A GRY+CSS I
Sbjct: 499 TMNTSSLYLLSYLKDGLETLDSGTRSFVDVRDTAKALLLVYEKDEAEGRYICSSHDITTQ 320
Query: 421 DIVNILKTEYPTYTYPQKFVEAEGSNTYNTEKLRKLGWTSRPMEDTLRDSIECYRAMGIL 242
D+ LK YP Y YP+ F S ++EKL LGW R +E++L +++ Y G L
Sbjct: 319 DLAEKLKAMYPHYNYPKSFAGGMPSMDMSSEKLLNLGWKYRSLEESLVAAVKNYEERGDL 140
>gb|DV466026.1|DV466026 MTUNUL1.P46.D03 NUL Populus fremontii x Populus angustifolia cDNA,
mRNA sequence
Length = 872
Score = 209 bits (450), Expect = 3e-053
Identities = 83/166 (50%), Positives = 111/166 (66%)
Frame = -2 / +3
Query: 862 KACYEAKAKRXXXXXXXXXVFNNPDWPKGEAFTEDSWSDGEYCRKNEEWYFLSKTLAEHE 683
KAC EAK KR V +NP WPKG+ E+ WSD EYCR + WY LSKT AE E
Sbjct: 372 KACAEAKVKRVVIVSSGSAVLSNPSWPKGQVMDENCWSDKEYCRATKNWYNLSKTEAESE 551
Query: 682 AFAYAAKTGLDIVTICPSLVIGPLLQPAVNTSVKVFLSYIKGDQEIVKDGPKNLVDVRDV 503
A+ YA ++GLD+V ICPSL++GP+LQ VN S V + +K + +++ + ++DVRDV
Sbjct: 552 AWEYAKRSGLDVVAICPSLILGPILQSTVNASTMVLIKILKDGCDSLENKLRPIIDVRDV 731
Query: 502 AGALLLAYENLQASGRYLCSSPAIRVSDIVNILKTEYPTYTYPQKF 365
ALLLAYE +A GRY+C++ AIRV D+V L++ YP Y YP+ F
Sbjct: 732 TEALLLAYETPEAEGRYICTAHAIRVKDLVEKLRSMYPNYNYPKSF 869
>gb|CV263391.1|CV263391 WS02021.B21_F18 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02021_F18 3', mRNA sequence
Length = 687
Score = 177 bits (381), Expect(2) = 1e-051
Identities = 70/137 (51%), Positives = 96/137 (70%)
Frame = -2 / -3
Query: 763 EDSWSDGEYCRKNEEWYFLSKTLAEHEAFAYAAKTGLDIVTICPSLVIGPLLQPAVNTSV 584
E+ WSD EYCR + WY LSKT AE EA+ YA ++GLD+V ICPSL++GP+LQ VN S
Sbjct: 685 ENCWSDKEYCRATKNWYNLSKTEAESEAWEYAKRSGLDVVAICPSLILGPILQSTVNAST 506
Query: 583 KVFLSYIKGDQEIVKDGPKNLVDVRDVAGALLLAYENLQASGRYLCSSPAIRVSDIVNIL 404
V + +K + +++ + ++DVRDV ALLLAYE +A GRY+C++ AIRV D+V L
Sbjct: 505 MVLIKILKDGCDSLENKLRPIIDVRDVTEALLLAYETPEAEGRYICTAHAIRVKDLVEKL 326
Query: 403 KTEYPTYTYPQKFVEAE 353
++ YP Y YP+ F E E
Sbjct: 325 RSMYPNYNYPKSFTEEE 275
Score = 46.4 bits (95), Expect(2) = 1e-051
Identities = 17/34 (50%), Positives = 29/34 (85%)
Frame = -2 / -3
Query: 337 NTEKLRKLGWTSRPMEDTLRDSIECYRAMGILN* 236
++EKL++LGW+ R +E+TL DS+E Y+ +G+L+*
Sbjct: 256 SSEKLQRLGWSFRSLEETLIDSVENYQKIGLLD* 155
>gb|DV465619.1|DV465619 MTUNUL1.P40.H09 NUL Populus fremontii x Populus angustifolia cDNA,
mRNA sequence
Length = 773
Score = 177 bits (381), Expect = 9e-044
Identities = 73/140 (52%), Positives = 91/140 (65%)
Frame = -2 / +2
Query: 859 ACYEAKAKRXXXXXXXXXVFNNPDWPKGEAFTEDSWSDGEYCRKNEEWYFLSKTLAEHEA 680
AC K K+ V NP+WPK +A E+SWSD E+C+ NE+WYFL+KT AE EA
Sbjct: 350 ACSITKVKKVIAVSSIAAVMLNPNWPKDQAMNEESWSDFEFCKANEQWYFLAKTEAEKEA 529
Query: 679 FAYAAKTGLDIVTICPSLVIGPLLQPAVNTSVKVFLSYIKGDQEIVKDGPKNLVDVRDVA 500
Y L IVTICPS++IGPLLQP +N+S LSY+K E + G ++ VDVRD A
Sbjct: 530 LEYGKTNELKIVTICPSIIIGPLLQPTMNSSSLYLLSYLKDGLETLDSGTRSFVDVRDTA 709
Query: 499 GALLLAYENLQASGRYLCSS 440
ALLL YE +A GRY+CSS
Sbjct: 710 KALLLIYEKDEAEGRYICSS 769
>gb|DN489752.1|DN489752 T076A08.3pR Populus shoot meristem cDNA library Populus tremula x
Populus tremuloides cDNA clone T076A08 3', mRNA sequence
Length = 686
Score = 175 bits (377), Expect = 3e-043
Identities = 72/143 (50%), Positives = 101/143 (70%)
Frame = -2 / -2
Query: 664 KTGLDIVTICPSLVIGPLLQPAVNTSVKVFLSYIKGDQEIVKDGPKNLVDVRDVAGALLL 485
++GLD+VTICPSL++GP L AVN S KV + +K E +++ ++LVDVRDVA ALLL
Sbjct: 682 RSGLDVVTICPSLILGPNLHSAVNASSKVLIKLLKEGYESLENKLRHLVDVRDVAEALLL 503
Query: 484 AYENLQASGRYLCSSPAIRVSDIVNILKTEYPTYTYPQKFVEAEGSNTYNTEKLRKLGWT 305
YE +A GRY+C++ IR D+V L+ YP Y YP+ F E E ++EKL++LGW+
Sbjct: 502 VYEKPEAEGRYICTAHEIRTEDLVEKLRNIYPNYNYPKSFTEEEEGINLSSEKLQRLGWS 323
Query: 304 SRPMEDTLRDSIECYRAMGILN* 236
RP+E+TL DS+E Y+ GIL+*
Sbjct: 322 YRPLEETLTDSVESYQKTGILD* 254
>gb|CV265927.1|CV265927 WS02028.B21_K07 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02028_K07 3', mRNA sequence
Length = 726
Score = 141 bits (303), Expect(2) = 6e-041
Identities = 57/116 (49%), Positives = 81/116 (69%)
Frame = -2 / -3
Query: 700 TLAEHEAFAYAAKTGLDIVTICPSLVIGPLLQPAVNTSVKVFLSYIKGDQEIVKDGPKNL 521
T AE EA+ YA ++GLD+V ICPSL++GP+LQ VN S V + +K + +++ + +
Sbjct: 724 TEAESEAWEYAKRSGLDVVAICPSLILGPILQSTVNASTMVLIKILKDGCDSLENKLRPI 545
Query: 520 VDVRDVAGALLLAYENLQASGRYLCSSPAIRVSDIVNILKTEYPTYTYPQKFVEAE 353
+DVRDV ALLLAYE +A GRY+C++ AIRV D+V L++ YP Y YP+ F E E
Sbjct: 544 IDVRDVTEALLLAYETPEAEGRYICTAHAIRVKDLVEKLRSMYPNYNYPKSFTEEE 377
Score = 46.4 bits (95), Expect(2) = 6e-041
Identities = 17/34 (50%), Positives = 29/34 (85%)
Frame = -2 / -3
Query: 337 NTEKLRKLGWTSRPMEDTLRDSIECYRAMGILN* 236
++EKL++LGW+ R +E+TL DS+E Y+ +G+L+*
Sbjct: 358 SSEKLQRLGWSFRSLEETLIDSVENYQKIGLLD* 257
>gb|CV236684.1|CV236684 WS01225.B21.1_A06 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01225_A06 3', mRNA sequence
Length = 895
Score = 139 bits (298), Expect = 2e-032
Identities = 61/184 (33%), Positives = 95/184 (51%)
Frame = -2 / -3
Query: 847 AKAKRXXXXXXXXXVFNNPDWPKGEAFTEDSWSDGEYCRKNEEWYFLSKTLAEHEAFAYA 668
+ KR V D P+ + E WSD EYC+++ WY +KT+AE EA+ +
Sbjct: 809 SSVKRVVFTSSSSTVRYRDDTPQIFSLNESHWSDTEYCKRHNLWYAYAKTVAEKEAWRVS 630
Query: 667 AKTGLDIVTICPSLVIGPLLQPAVNTSVKVFLSYIKGDQEIVKDGPKNLVDVRDVAGALL 488
+ G+D+V+ PS V+GPLL P N+++ + S +KG + + + DV +
Sbjct: 629 KENGIDLVSFIPSFVVGPLLAPEPNSTLLLIQSVVKGSRGEYPNMTVGFTHIDDVVAGNI 450
Query: 487 LAYENLQASGRYLCSSPAIRVSDIVNILKTEYPTYTYPQKFVEAEGSNTYNTEKLRKLGW 308
LA EN +ASGR +CS P S I+ +L+ +YP+Y Y K EG N ++ K+
Sbjct: 449 LAMENSEASGRLVCSGPVAHWSQIIKMLRAKYPSYPYENKCSSQEGDNIPHSMDTTKIAQ 270
Query: 307 TSRP 296
P
Sbjct: 269 LGLP 258
>gb|CV236829.1|CV236829 WS01225.B21.1_K06 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01225_K06 3', mRNA sequence
Length = 868
Score = 139 bits (298), Expect = 2e-032
Identities = 61/184 (33%), Positives = 95/184 (51%)
Frame = -2 / -3
Query: 847 AKAKRXXXXXXXXXVFNNPDWPKGEAFTEDSWSDGEYCRKNEEWYFLSKTLAEHEAFAYA 668
+ KR V D P+ + E WSD EYC+++ WY +KT+AE EA+ +
Sbjct: 809 SSVKRVVFTSSSSTVRYRDDTPQIFSLNESHWSDTEYCKRHNLWYAYAKTVAEKEAWRVS 630
Query: 667 AKTGLDIVTICPSLVIGPLLQPAVNTSVKVFLSYIKGDQEIVKDGPKNLVDVRDVAGALL 488
+ G+D+V+ PS V+GPLL P N+++ + S +KG + + + DV +
Sbjct: 629 KENGIDLVSFIPSFVVGPLLAPEPNSTLLLIQSVVKGSRGEYPNMTVGFTHIDDVVAGNI 450
Query: 487 LAYENLQASGRYLCSSPAIRVSDIVNILKTEYPTYTYPQKFVEAEGSNTYNTEKLRKLGW 308
LA EN +ASGR +CS P S I+ +L+ +YP+Y Y K EG N ++ K+
Sbjct: 449 LAMENSEASGRLVCSGPVAHWSQIIKMLRAKYPSYPYENKCSSQEGDNIPHSMDTTKIAQ 270
Query: 307 TSRP 296
P
Sbjct: 269 LGLP 258
>gb|CV266528.1|CV266528 WS0203.B21_E12 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS0203_E12 3', mRNA sequence
Length = 823
Score = 139 bits (298), Expect = 2e-032
Identities = 61/184 (33%), Positives = 95/184 (51%)
Frame = -2 / -1
Query: 847 AKAKRXXXXXXXXXVFNNPDWPKGEAFTEDSWSDGEYCRKNEEWYFLSKTLAEHEAFAYA 668
+ KR V D P+ + E WSD EYC+++ WY +KT+AE EA+ +
Sbjct: 820 SSVKRVMFTSSSSTVRYRDDTPQIFSLNESHWSDTEYCKRHNLWYAYAKTVAEKEAWRVS 641
Query: 667 AKTGLDIVTICPSLVIGPLLQPAVNTSVKVFLSYIKGDQEIVKDGPKNLVDVRDVAGALL 488
+ G+D+V+ PS V+GPLL P N+++ + S +KG + + + DV +
Sbjct: 640 KENGIDLVSFIPSFVVGPLLAPEPNSTLLLIQSVVKGSRGEYPNMTVGFTHIDDVVAGNI 461
Query: 487 LAYENLQASGRYLCSSPAIRVSDIVNILKTEYPTYTYPQKFVEAEGSNTYNTEKLRKLGW 308
LA EN +ASGR +CS P S I+ +L+ +YP+Y Y K EG N ++ K+
Sbjct: 460 LAMENSEASGRLVCSGPVAHWSQIIKMLRAKYPSYPYENKCSSQEGDNIPHSMDTTKIAQ 281
Query: 307 TSRP 296
P
Sbjct: 280 LGLP 269
>gb|CV234645.1|CV234645 WS01215.B21.1_L03 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01215_L03 3', mRNA sequence
Length = 751
Score = 138 bits (297), Expect = 3e-032
Identities = 58/165 (35%), Positives = 91/165 (55%)
Frame = -2 / -3
Query: 790 DWPKGEAFTEDSWSDGEYCRKNEEWYFLSKTLAEHEAFAYAAKTGLDIVTICPSLVIGPL 611
D P+ + E WSD EYC+++ WY +KT+AE EA+ + + G+D+V+ PS V+GPL
Sbjct: 728 DTPQIFSLNESHWSDTEYCKRHNLWYAYAKTVAEKEAWRVSKENGIDLVSFIPSFVVGPL 549
Query: 610 LQPAVNTSVKVFLSYIKGDQEIVKDGPKNLVDVRDVAGALLLAYENLQASGRYLCSSPAI 431
L P N+++ + S +KG + + + DV +LA EN +ASGR +CS P
Sbjct: 548 LAPEPNSTLLLIQSVVKGSRGEYPNMTVGFTHIDDVVAGNILAMENSEASGRLVCSGPVA 369
Query: 430 RVSDIVNILKTEYPTYTYPQKFVEAEGSNTYNTEKLRKLGWTSRP 296
S I+ +L+ +YP+Y Y K EG N ++ K+ P
Sbjct: 368 HWSQIIKMLRAKYPSYPYENKCSSQEGDNIPHSMDTTKIAQLGLP 234
>gb|CN524508.1|CN524508 GQ015M13.T3_B12 GQ015 Populus trichocarpa x Populus deltoides cDNA
clone GQ015M13_B12 5', mRNA sequence
Length = 830
Score = 138 bits (296), Expect = 5e-032
Identities = 59/168 (35%), Positives = 90/168 (53%)
Frame = -2 / +3
Query: 847 AKAKRXXXXXXXXXVFNNPDWPKGEAFTEDSWSDGEYCRKNEEWYFLSKTLAEHEAFAYA 668
+ KR V D P+ + E WSD EYC+++ WY +KT+AE EA+ +
Sbjct: 168 SSVKRVVFTSSSSTVRYRDDTPQIFSLNESHWSDTEYCKRHNLWYAYAKTVAEKEAWRVS 347
Query: 667 AKTGLDIVTICPSLVIGPLLQPAVNTSVKVFLSYIKGDQEIVKDGPKNLVDVRDVAGALL 488
+ G+D+V+ PS V+GPLL P N+++ + S +KG + + + DV +
Sbjct: 348 KENGIDLVSFIPSFVVGPLLAPEPNSTLLLIQSVVKGSRGEYPNMTVGFTHIDDVVAGNI 527
Query: 487 LAYENLQASGRYLCSSPAIRVSDIVNILKTEYPTYTYPQKFVEAEGSN 344
LA EN +ASGR +CS P S I+ +L+ +YP+Y Y K EG N
Sbjct: 528 LAMENSEASGRLVCSGPVAHWSQIIKMLRAKYPSYPYENKCSSQEGDN 671
>gb|CV281862.1|CV281862 WS0183.B21_B01 PTxD-IL-N-A-9 Populus trichocarpa x Populus
deltoides cDNA clone WS0183_B01 3', mRNA sequence
Length = 832
Score = 138 bits (296), Expect = 5e-032
Identities = 59/175 (33%), Positives = 94/175 (53%)
Frame = -2 / -2
Query: 790 DWPKGEAFTEDSWSDGEYCRKNEEWYFLSKTLAEHEAFAYAAKTGLDIVTICPSLVIGPL 611
D P+ + E WSD EYC+++ WY +KT+AE EA+ + + G+D+V+ PS V+GPL
Sbjct: 810 DTPQIFSLNESHWSDTEYCKRHNLWYAYAKTVAEKEAWRVSKENGIDLVSFIPSFVVGPL 631
Query: 610 LQPAVNTSVKVFLSYIKGDQEIVKDGPKNLVDVRDVAGALLLAYENLQASGRYLCSSPAI 431
L P N+++ + S +KG + + + DV +LA EN +ASGR +CS P
Sbjct: 630 LAPEPNSTLLLIQSVVKGSRGEYPNMTVGFTHIDDVVAGNILAMENSEASGRLVCSGPVA 451
Query: 430 RVSDIVNILKTEYPTYTYPQKFVEAEGSNTYNTEKLRKLGWTSRPMEDTLRDSIE 266
S I+ +L+ +YP+Y Y K EG + ++ K+ P TL +
Sbjct: 450 HWSQIIKMLRAKYPSYPYENKCSSQEGDSIPHSMDTTKIAQLGLPPFKTLEQMFD 286
>emb|AJ224986.1|PTR224986 Populus trichocarpa mRNA for cinnamoyl CoA reductase
Length = 1376
Score = 138 bits (296), Expect = 5e-032
Identities = 62/164 (37%), Positives = 87/164 (53%)
Frame = -2 / +3
Query: 859 ACYEAKAKRXXXXXXXXXVFNNPDWPKGEAFTEDSWSDGEYCRKNEEWYFLSKTLAEHEA 680
A EAK +R V+ +P+ E WSD E+C+ + WY K +AE A
Sbjct: 441 AAAEAKVRRVVFTSSIGAVYMDPNKGPDVVIDESCWSDLEFCKNTKNWYCYGKAVAEQAA 620
Query: 679 FAYAAKTGLDIVTICPSLVIGPLLQPAVNTSVKVFLSYIKGDQEIVKDGPKNLVDVRDVA 500
+ A + G+D+V + P LV+GPLLQP VN S+ L Y+ G + + + V VRDVA
Sbjct: 621 WDMAKEKGVDLVVVNPVLVLGPLLQPTVNASITHILKYLTGSAKTYANSVQAYVHVRDVA 800
Query: 499 GALLLAYENLQASGRYLCSSPAIRVSDIVNILKTEYPTYTYPQK 368
A +L +E ASGRYLCS + ++V IL +P Y P K
Sbjct: 801 LAHILVFETPSASGRYLCSESVLHRGEVVEILAKFFPEYPIPTK 932
>gb|AY479973.1| Populus tomentosa cinnamoyl CoA reductase mRNA, complete cds
Length = 1113
Score = 137 bits (293), Expect = 1e-031
Identities = 62/164 (37%), Positives = 87/164 (53%)
Frame = -2 / +2
Query: 859 ACYEAKAKRXXXXXXXXXVFNNPDWPKGEAFTEDSWSDGEYCRKNEEWYFLSKTLAEHEA 680
A EAK +R V+ +P+ E WSD E+C+ + WY K +AE A
Sbjct: 395 AAAEAKVRRVVFTSSIGAVYMDPNKGPDVVIDESCWSDLEFCKNTKNWYCHGKAVAEQAA 574
Query: 679 FAYAAKTGLDIVTICPSLVIGPLLQPAVNTSVKVFLSYIKGDQEIVKDGPKNLVDVRDVA 500
+ A + G+D+V + P LV+GPLLQP VN S+ L Y+ G + + + V VRDVA
Sbjct: 575 WDMAKEKGVDLVVVNPVLVLGPLLQPTVNASIVHILKYLTGSAKTYANSVQAYVHVRDVA 754
Query: 499 GALLLAYENLQASGRYLCSSPAIRVSDIVNILKTEYPTYTYPQK 368
A +L +E ASGRYLCS + ++V IL +P Y P K
Sbjct: 755 LAHILVFETPSASGRYLCSESVLHRGEVVEILAKFFPEYPIPTK 886
>gb|AF217958.1| Populus tremuloides cinnamoyl CoA reductase mRNA, complete cds
Length = 1361
Score = 136 bits (291), Expect = 2e-031
Identities = 61/164 (37%), Positives = 86/164 (52%)
Frame = -2 / +1
Query: 859 ACYEAKAKRXXXXXXXXXVFNNPDWPKGEAFTEDSWSDGEYCRKNEEWYFLSKTLAEHEA 680
A EAK +R V+ +P+ E WSD E+C+ + WY K +AE A
Sbjct: 436 AAAEAKVRRVVFTSSIGAVYMDPNKGPDVVIDESCWSDLEFCKNTKNWYCYGKAVAEQAA 615
Query: 679 FAYAAKTGLDIVTICPSLVIGPLLQPAVNTSVKVFLSYIKGDQEIVKDGPKNLVDVRDVA 500
+ A + G+D+V + P LV+GPL QP VN S+ L Y+ G + + + V VRDVA
Sbjct: 616 WDMAKEKGVDLVVVNPVLVLGPLFQPTVNASIVHILKYLTGSAKTYANSVQAYVHVRDVA 795
Query: 499 GALLLAYENLQASGRYLCSSPAIRVSDIVNILKTEYPTYTYPQK 368
A +L +E ASGRYLCS + ++V IL +P Y P K
Sbjct: 796 LAHILVFETPSASGRYLCSESVLHRGEVVEILAKFFPEYPIPTK 927
>gb|BU878087.1|BU878087 V043A04 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 528
Score = 134 bits (287), Expect = 8e-031
Identities = 55/153 (35%), Positives = 86/153 (56%)
Frame = -2 / +3
Query: 754 WSDGEYCRKNEEWYFLSKTLAEHEAFAYAAKTGLDIVTICPSLVIGPLLQPAVNTSVKVF 575
WSD EYC+++ WY +KT+AE EA+ + + G+D+V+ PS V+GPLL P N+++ +
Sbjct: 27 WSDTEYCKRHNLWYAYAKTVAEKEAWRVSKENGIDLVSFIPSFVVGPLLAPEPNSTLLLI 206
Query: 574 LSYIKGDQEIVKDGPKNLVDVRDVAGALLLAYENLQASGRYLCSSPAIRVSDIVNILKTE 395
S +KG + + + DV +LA EN +ASGR +CS P S I+ +L+ +
Sbjct: 207 QSVVKGSRGEYPNMTVGFTHIDDVVAGNILAMENSEASGRLVCSGPVAHWSQIIKMLRAK 386
Query: 394 YPTYTYPQKFVEAEGSNTYNTEKLRKLGWTSRP 296
YP+Y Y K EG N ++ K+ P
Sbjct: 387 YPSYPYENKCSSQEGDNIPHSMDTTKIAQLGLP 485
>gb|CX177347.1|CX177347 G06_45-77_14.ab1 leaf inoculated with Marssonia pathogen of Populus
euramericana Populus x canadensis cDNA, mRNA sequence
Length = 669
Score = 133 bits (286), Expect = 1e-030
Identities = 52/101 (51%), Positives = 65/101 (64%)
Frame = -2 / +3
Query: 862 KACYEAKAKRXXXXXXXXXVFNNPDWPKGEAFTEDSWSDGEYCRKNEEWYFLSKTLAEHE 683
KAC EAK KR V +NP WPKG+ E+ WSD EYCR + WY LSKT AE E
Sbjct: 333 KACAEAKVKRVVIVSSGSAVLSNPSWPKGQVMDENCWSDKEYCRATKNWYNLSKTEAESE 512
Query: 682 AFAYAAKTGLDIVTICPSLVIGPLLQPAVNTSVKVFLSYIK 560
A+ YA ++GLD+V ICPSL++GP+LQ S KV + +K
Sbjct: 513 AWEYAKRSGLDLVAICPSLILGPILQSTAKRSTKVLIKILK 635
>gb|DT472073.1|DT472073 WS01225.BR.1_A06 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01225_A06 5', mRNA sequence
Length = 871
Score = 133 bits (284), Expect = 2e-030
Identities = 56/160 (35%), Positives = 87/160 (54%)
Frame = -2 / +3
Query: 847 AKAKRXXXXXXXXXVFNNPDWPKGEAFTEDSWSDGEYCRKNEEWYFLSKTLAEHEAFAYA 668
+ KR V D P+ + E WSD EYC+++ WY +KT+AE EA+ +
Sbjct: 387 SSVKRVVFTSSSSTVRYRDDTPQIFSLNESHWSDTEYCKRHNLWYAYAKTVAEKEAWRVS 566
Query: 667 AKTGLDIVTICPSLVIGPLLQPAVNTSVKVFLSYIKGDQEIVKDGPKNLVDVRDVAGALL 488
+ G+D+V+ PS V+GPLL P N+++ + S +KG + + + DV +
Sbjct: 567 KENGIDLVSFIPSFVVGPLLAPEPNSTLLLIQSVVKGSRGEYPNMTVGFTHIDDVVAGNI 746
Query: 487 LAYENLQASGRYLCSSPAIRVSDIVNILKTEYPTYTYPQK 368
LA EN +ASGR +CS P S I+ +L+ +YP+Y Y K
Sbjct: 747 LAMENSEASGRLVCSGPVAHWSQIIKMLRAKYPSYPYENK 866
>gb|DV466667.1|DV466667 MTUNUL1.P8.F08 NUL Populus fremontii x Populus angustifolia cDNA,
mRNA sequence
Length = 878
Score = 133 bits (284), Expect = 2e-030
Identities = 56/160 (35%), Positives = 87/160 (54%)
Frame = -2 / +1
Query: 847 AKAKRXXXXXXXXXVFNNPDWPKGEAFTEDSWSDGEYCRKNEEWYFLSKTLAEHEAFAYA 668
+ KR V D P+ + E WSD EYC+++ WY +KT+AE EA+ +
Sbjct: 388 SSVKRVVFTSSSSTVRYRDDTPQIFSLNESHWSDTEYCKRHNLWYAYAKTVAEKEAWRVS 567
Query: 667 AKTGLDIVTICPSLVIGPLLQPAVNTSVKVFLSYIKGDQEIVKDGPKNLVDVRDVAGALL 488
+ G+D+V+ PS V+GPLL P N+++ + S +KG + + + DV +
Sbjct: 568 KENGIDLVSFIPSFVVGPLLAPEPNSTLLLIQSVVKGSRGEYPNMTVGFTHIDDVVAGNI 747
Query: 487 LAYENLQASGRYLCSSPAIRVSDIVNILKTEYPTYTYPQK 368
LA EN +ASGR +CS P S I+ +L+ +YP+Y Y K
Sbjct: 748 LAMENSEASGRLVCSGPVAHWSQIIKMLRAKYPSYPYENK 867
>gb|DN490760.1|DN490760 UL83TE05.3pR Populus cold stressed leaves cDNA library Populus
tremula x Populus tremuloides cDNA clone UL83TE05 3',
mRNA sequence
Length = 753
Score = 132 bits (283), Expect = 3e-030
Identities = 58/175 (33%), Positives = 91/175 (52%)
Frame = -2 / -1
Query: 790 DWPKGEAFTEDSWSDGEYCRKNEEWYFLSKTLAEHEAFAYAAKTGLDIVTICPSLVIGPL 611
D P+ E WSD EYC+++ WY +K +AE A+ + + G+D+V+ PS V+GPL
Sbjct: 723 DTPQIFYLNESHWSDTEYCKRHNLWYAYAKAVAEK*AWRVSKENGIDLVSFIPSFVVGPL 544
Query: 610 LQPAVNTSVKVFLSYIKGDQEIVKDGPKNLVDVRDVAGALLLAYENLQASGRYLCSSPAI 431
L P N+++ + S +KG + + + DV +LA EN +ASGR LCS
Sbjct: 543 LAPEPNSTLLLIQSIVKGSRGEYPNMTVGFTHIDDVVAGSILAMENSEASGRLLCSGQVA 364
Query: 430 RVSDIVNILKTEYPTYTYPQKFVEAEGSNTYNTEKLRKLGWTSRPMEDTLRDSIE 266
S I+ +L+ +YP+Y Y K EG N ++ K+ P TL + +
Sbjct: 363 HWSQIIEMLRAKYPSYPYENKCSSQEGDNNPHSMDTTKIAQLGLPPFKTLEEMFD 199
>gb|AJ770080.1|AJ770080 AJ770080 Populus euphratica leaf 3-6 months, adult Populus
euphratica cDNA clone P0001100006H03F1, mRNA sequence
Length = 387
Score = 132 bits (282), Expect = 4e-030
Identities = 50/92 (54%), Positives = 63/92 (68%)
Frame = -2 / -1
Query: 862 KACYEAKAKRXXXXXXXXXVFNNPDWPKGEAFTEDSWSDGEYCRKNEEWYFLSKTLAEHE 683
KAC EAK +R V +NP WPKG+ E+ WSD EYCR + WY LSKT+AE E
Sbjct: 276 KACAEAKVRRVVIVSSGSAVLSNPSWPKGQVMDENCWSDKEYCRATKNWYNLSKTVAESE 97
Query: 682 AFAYAAKTGLDIVTICPSLVIGPLLQPAVNTS 587
A+ YA ++GLD+V ICPSL++GP+LQ VN S
Sbjct: 96 AWEYAKRSGLDVVAICPSLILGPILQSTVNAS 1
>gb|DT472319.1|DT472319 WS01225.BR_K06 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01225_K06 5', mRNA sequence
Length = 861
Score = 131 bits (280), Expect = 7e-030
Identities = 55/157 (35%), Positives = 86/157 (54%)
Frame = -2 / +1
Query: 847 AKAKRXXXXXXXXXVFNNPDWPKGEAFTEDSWSDGEYCRKNEEWYFLSKTLAEHEAFAYA 668
+ KR V D P+ + E WSD EYC+++ WY +KT+AE EA+ +
Sbjct: 391 SSVKRVVFTSSSSTVRYRDDTPQIFSLNESHWSDTEYCKRHNLWYAYAKTVAEKEAWRVS 570
Query: 667 AKTGLDIVTICPSLVIGPLLQPAVNTSVKVFLSYIKGDQEIVKDGPKNLVDVRDVAGALL 488
+ G+D+V+ PS V+GPLL P N+++ + S +KG + + + DV +
Sbjct: 571 KENGIDLVSFIPSFVVGPLLAPEPNSTLLLIQSVVKGSRGEYPNMTVGFTHIDDVVAGNI 750
Query: 487 LAYENLQASGRYLCSSPAIRVSDIVNILKTEYPTYTY 377
LA EN +ASGR +CS P S I+ +L+ +YP+Y Y
Sbjct: 751 LAMENSEASGRLVCSGPVAHWSQIIKMLRAKYPSYPY 861
>gb|AJ769009.1|AJ769009 AJ769009 Populus euphratica leaf adult Populus euphratica cDNA
clone P0000100024C11F1, mRNA sequence
Length = 652
Score = 127 bits (273), Expect = 7e-029
Identities = 53/109 (48%), Positives = 70/109 (64%)
Frame = -2 / +2
Query: 862 KACYEAKAKRXXXXXXXXXVFNNPDWPKGEAFTEDSWSDGEYCRKNEEWYFLSKTLAEHE 683
+AC EAK KR V NP PKG+ E+ WSD EYCR + WY LSKT AE E
Sbjct: 317 RACDEAKVKRVVVVSSVVAVCMNPSLPKGQVMDENWWSDKEYCRATKNWYCLSKTEAESE 496
Query: 682 AFAYAAKTGLDIVTICPSLVIGPLLQPAVNTSVKVFLSYIKGDQEIVKD 536
A+ YA ++GLD+VTICPSL++GP+L AV+ S KV + +K E +++
Sbjct: 497 AWEYAKRSGLDVVTICPSLILGPILPSAVSASSKVLIKLLKEGHESLEN 643
>gb|AJ769020.1|AJ769020 AJ769020 Populus euphratica leaf adult Populus euphratica cDNA
clone P0000100024D10F1, mRNA sequence
Length = 636
Score = 126 bits (270), Expect = 2e-028
Identities = 52/101 (51%), Positives = 66/101 (65%)
Frame = -2 / +2
Query: 862 KACYEAKAKRXXXXXXXXXVFNNPDWPKGEAFTEDSWSDGEYCRKNEEWYFLSKTLAEHE 683
+AC EAK KR V NP PKG+ E+ WSD EYCR + WY LSKT AE E
Sbjct: 317 RACDEAKVKRVVVVSSVVAVCMNPSLPKGQVMDENWWSDKEYCRATKNWYCLSKTEAESE 496
Query: 682 AFAYAAKTGLDIVTICPSLVIGPLLQPAVNTSVKVFLSYIK 560
A+ YA ++GLD+VTICPSL++GP+L AV+ S KV + +K
Sbjct: 497 AWEYAKRSGLDVVTICPSLILGPILPSAVSASSKVLIKLLK 619
>gb|AJ778774.1|AJ778774 AJ778774 Populus euphratica cambium 3-6 months Populus euphratica
cDNA clone P0000600006A09F1, mRNA sequence
Length = 697
Score = 124 bits (266), Expect = 6e-028
Identities = 55/139 (39%), Positives = 77/139 (55%)
Frame = -2 / +3
Query: 859 ACYEAKAKRXXXXXXXXXVFNNPDWPKGEAFTEDSWSDGEYCRKNEEWYFLSKTLAEHEA 680
A EAK +R V+ +P+ E WSD E+C+ + WY KT+AE +A
Sbjct: 36 AAAEAKVRRVVFTSSIGTVYMDPNRSPDVVVDESCWSDLEFCKNTKNWYCYGKTVAEQDA 215
Query: 679 FAYAAKTGLDIVTICPSLVIGPLLQPAVNTSVKVFLSYIKGDQEIVKDGPKNLVDVRDVA 500
+ A K G+D+V + P LV+GPLLQP VN S+ L Y+ G + + V VRDVA
Sbjct: 216 WDVARKKGVDLVVVNPVLVLGPLLQPTVNASMVHILKYLTGSARTYANSVQGYVHVRDVA 395
Query: 499 GALLLAYENLQASGRYLCS 443
A +L +E ASGRY+C+
Sbjct: 396 LAHILVFETPSASGRYICA 452
>gb|AJ768870.1|AJ768870 AJ768870 Populus euphratica leaf adult Populus euphratica cDNA
clone P0000100022G01F1, mRNA sequence
Length = 640
Score = 123 bits (264), Expect = 1e-027
Identities = 52/105 (49%), Positives = 66/105 (62%)
Frame = -2 / +2
Query: 862 KACYEAKAKRXXXXXXXXXVFNNPDWPKGEAFTEDSWSDGEYCRKNEEWYFLSKTLAEHE 683
+AC EAK KR V NP PKG+ E+ WSD EYCR + WY LSKT AE E
Sbjct: 323 RACDEAKVKRVVVVSSVVAVCMNPSLPKGQVMDENWWSDKEYCRATKNWYCLSKTEAESE 502
Query: 682 AFAYAAKTGLDIVTICPSLVIGPLLQPAVNTSVKVFLSYIKGDQE 548
A+ YA ++GLD+VTICPSL++ P+L AV+ S KV + +K E
Sbjct: 503 AWEYAKRSGLDVVTICPSLILRPILPSAVSASSKVLIKLLKEGHE 637
>gb|BU836323.1|BU836323 T085A10 Populus apical shoot cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 659
Score = 123 bits (263), Expect = 2e-027
Identities = 53/158 (33%), Positives = 85/158 (53%)
Frame = -2 / +2
Query: 739 YCRKNEEWYFLSKTLAEHEAFAYAAKTGLDIVTICPSLVIGPLLQPAVNTSVKVFLSYIK 560
YC+++ WY +KT+AE EA+ + + G+D+V+ PS V+GPLL P N+++ + S +K
Sbjct: 2 YCKRHNLWYAYAKTVAEKEAWRVSKENGIDLVSFIPSFVVGPLLAPEPNSTLLLIQSIVK 181
Query: 559 GDQEIVKDGPKNLVDVRDVAGALLLAYENLQASGRYLCSSPAIRVSDIVNILKTEYPTYT 380
G + + + DV +LA EN +ASGR LCS S I+ +L+ +YP+Y
Sbjct: 182 GSRGEYPNMTVGFTHIDDVVAGSILAMENSEASGRLLCSGQVAHWSQIIEMLRAKYPSYP 361
Query: 379 YPQKFVEAEGSNTYNTEKLRKLGWTSRPMEDTLRDSIE 266
Y K EG N ++ K+ P TL + +
Sbjct: 362 YENKCSSQEGDNNPHSMDTTKIVQLGLPPFKTLEEMFD 475
>gb|AJ780841.1|AJ780841 AJ780841 Populus euphratica leaf 3-6 months Populus euphratica cDNA
clone P0000900014A11F1, mRNA sequence
Length = 287
Score = 123 bits (263), Expect = 2e-027
Identities = 47/91 (51%), Positives = 59/91 (64%)
Frame = -2 / +2
Query: 859 ACYEAKAKRXXXXXXXXXVFNNPDWPKGEAFTEDSWSDGEYCRKNEEWYFLSKTLAEHEA 680
AC K K+ V NP+WPK +A E+SWSD E+C+ NE+WYFL+KT AE EA
Sbjct: 8 ACSRTKVKKVIAVSSIAAVMLNPNWPKDQAMNEESWSDFEFCKANEQWYFLAKTKAEKEA 187
Query: 679 FAYAAKTGLDIVTICPSLVIGPLLQPAVNTS 587
Y L I TICPS++IGPLLQP +N+S
Sbjct: 188 LEYGKANELKIATICPSIIIGPLLQPTMNSS 280
>gb|CK318210.1|CK318210 B9P06g01 Populus stem seasonal library Populus deltoides cDNA, mRNA
sequence
Length = 700
Score = 122 bits (262), Expect = 2e-027
Identities = 54/163 (33%), Positives = 86/163 (52%)
Frame = -2 / +2
Query: 859 ACYEAKAKRXXXXXXXXXVFNNPDWPKGEAFTEDSWSDGEYCRKNEEWYFLSKTLAEHEA 680
A E +R + +P+WP ED W+D EYC++N WY LSKTLAE A
Sbjct: 41 AAKENGVRRVVVTSSVSSIAPSPNWPADVIKNEDCWTDVEYCKQNGLWYPLSKTLAEKAA 220
Query: 679 FAYAAKTGLDIVTICPSLVIGPLLQPAVNTSVKVFLSYIKGDQEIVKDGPKNLVDVRDVA 500
+ ++ + GLD+V + P V+GP++ P +N S+ + + ++G E ++ V +DVA
Sbjct: 221 WEFSKEKGLDMVVVNPGTVMGPVISPVLNASMVMLVRLLQGCTETYQNFFIGSVHFKDVA 400
Query: 499 GALLLAYENLQASGRYLCSSPAIRVSDIVNILKTEYPTYTYPQ 371
A ++ YEN A+GR++C D + YP Y P+
Sbjct: 401 LAHIIVYENPSATGRHMCVEAISHYGDFAAKVAELYPEYKIPR 529
>gb|DV464242.1|DV464242 MTUNUL1.P25.A01 NUL Populus fremontii x Populus angustifolia cDNA,
mRNA sequence
Length = 866
Score = 122 bits (262), Expect = 2e-027
Identities = 55/143 (38%), Positives = 77/143 (53%)
Frame = -2 / +1
Query: 859 ACYEAKAKRXXXXXXXXXVFNNPDWPKGEAFTEDSWSDGEYCRKNEEWYFLSKTLAEHEA 680
A EAK +R V+ +P+ E WSD E+C+ + WY K +AE A
Sbjct: 433 AAAEAKVRRVVFTSSIGAVYMDPNKGPDVVIDESCWSDLEFCKNTKNWYCYGKAVAEQAA 612
Query: 679 FAYAAKTGLDIVTICPSLVIGPLLQPAVNTSVKVFLSYIKGDQEIVKDGPKNLVDVRDVA 500
+ A + G+D+V + P LV+GPLLQP VN S+ L Y+ G + + + V VRDVA
Sbjct: 613 WDMAKEKGVDLVVVNPVLVLGPLLQPTVNASITHILKYLTGSAKTYANSVQAYVHVRDVA 792
Query: 499 GALLLAYENLQASGRYLCSSPAI 431
A +L +E ASGRYLCS +
Sbjct: 793 LAHILVFETPSASGRYLCSESVL 861
>gb|AJ780609.1|AJ780609 AJ780609 Populus euphratica leaf 3-6 months Populus euphratica cDNA
clone P0000900010C07F1, mRNA sequence
Length = 287
Score = 122 bits (261), Expect = 3e-027
Identities = 47/91 (51%), Positives = 60/91 (65%)
Frame = -2 / +2
Query: 859 ACYEAKAKRXXXXXXXXXVFNNPDWPKGEAFTEDSWSDGEYCRKNEEWYFLSKTLAEHEA 680
AC K K+ V NP+WPK +A E+SWSD E+C+ +E+WYFL+KT AE EA
Sbjct: 8 ACSRTKVKKVIAVSSIAAVMLNPNWPKDQAMNEESWSDFEFCKADEQWYFLAKTKAEKEA 187
Query: 679 FAYAAKTGLDIVTICPSLVIGPLLQPAVNTS 587
Y L IVTICPS++IGPLLQP +N+S
Sbjct: 188 LEYEKANELKIVTICPSIIIGPLLQPTMNSS 280
>gb|AJ779719.1|AJ779719 AJ779719 Populus euphratica root 3-6 months Populus euphratica cDNA
clone P0000800005G06F1, mRNA sequence
Length = 676
Score = 120 bits (256), Expect = 1e-026
Identities = 50/135 (37%), Positives = 80/135 (59%)
Frame = -2 / +3
Query: 775 EAFTEDSWSDGEYCRKNEEWYFLSKTLAEHEAFAYAAKTGLDIVTICPSLVIGPLLQPAV 596
+ F E SW+D +YC+ ++WY +SKTLAE A+ +A + +D++ I P+ +GPLLQPA+
Sbjct: 9 KVFDESSWTDLDYCKSRQKWYPVSKTLAEKAAWEFAGRNAMDVLAIHPATCLGPLLQPAL 188
Query: 595 NTSVKVFLSYIKGDQEIVKDGPKNLVDVRDVAGALLLAYENLQASGRYLCSSPAIRVSDI 416
N S V ++G ++ + V VRDVA A +L +E ASGRYLC++ + D
Sbjct: 189 NASCAVLQQLLQGSRDTQEYHWLGAVHVRDVAMAQVLLFETPTASGRYLCTNGIYQFGDF 368
Query: 415 VNILKTEYPTYTYPQ 371
+ +P ++ Q
Sbjct: 369 AATVSRLFPEFSSSQ 413
>gb|CV273681.1|CV273681 WS01711.B21_N04 PTxD-NR-A-8 Populus trichocarpa x Populus deltoides
cDNA clone WS01711_N04 3', mRNA sequence
Length = 568
Score = 120 bits (256), Expect = 1e-026
Identities = 54/123 (43%), Positives = 72/123 (58%)
Frame = -2 / -3
Query: 610 LQPAVNTSVKVFLSYIKGDQEIVKDGPKNLVDVRDVAGALLLAYENLQASGRYLCSSPAI 431
LQP +N+S LSY+K E + G ++ VDVRD A ALLL YE +A GRY+CSS I
Sbjct: 566 LQPTMNSSSLYLLSYLKDGLETLDSGTRSFVDVRDTAKALLLIYEKDEAEGRYICSSHDI 387
Query: 430 RVSDIVNILKTEYPTYTYPQKFVEAEGSNTYNTEKLRKLGWTSRPMEDTLRDSIECYRAM 251
D+ LK YP Y YP+ F S ++EKL LGW R +E++L D+++ Y
Sbjct: 386 TTQDLAEKLKAMYPHYNYPKSFSGGMPSMDMSSEKLLNLGWKYRSLEESLVDAVKNYEER 207
Query: 250 GIL 242
G L
Sbjct: 206 GDL 198
>gb|DT512017.1|DT512017 WS02418.B21_C02 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02418_C02 3', mRNA sequence
Length = 849
Score = 120 bits (256), Expect = 1e-026
Identities = 60/152 (39%), Positives = 78/152 (51%)
Frame = -2 / -2
Query: 802 FNNPDWPKGEAFTEDSWSDGEYCRKNEEWYFLSKTLAEHEAFAYAAKTGLDIVTICPSLV 623
FN G E +SD +C N+ WY SKTLAE A+ + + G+D+VTI P V
Sbjct: 806 FNGKPLTPGVVVDETWFSDSAFCVSNKLWYMASKTLAEEAAWKFVKEKGIDMVTINPGFV 627
Query: 622 IGPLLQPAVNTSVKVFLSYIKGDQEIVKDGPKNLVDVRDVAGALLLAYENLQASGRYLCS 443
IGPLLQP + ++ ++FL I G + VDVRDVA A + A E ASGRY
Sbjct: 626 IGPLLQPTLKSTAELFLDRINGGAPGLPSEIYRFVDVRDVAYAHIQALEIPSASGRYCLV 447
Query: 442 SPAIRVSDIVNILKTEYPTYTYPQKFVEAEGS 347
SD V I YPT P+K + + S
Sbjct: 446 GRVAHFSDAVKIAHELYPTLPLPEKCADDKPS 351
>gb|CV245139.1|CV245139 WS0256.B21_J10 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS0256_J10 3', mRNA sequence
Length = 896
Score = 82.6 bits (174), Expect(2) = 2e-026
Identities = 36/93 (38%), Positives = 52/93 (55%)
Frame = -2 / -1
Query: 646 VTICPSLVIGPLLQPAVNTSVKVFLSYIKGDQEIVKDGPKNLVDVRDVAGALLLAYENLQ 467
+ + P +V+GPLLQP VN S+ L Y+ G + + + V VRDVA A +L +E
Sbjct: 653 LVVNPVVVLGPLLQPTVNASILHILKYLTGSAKTYANAVQAYVHVRDVAVAHILVFETPS 474
Query: 466 ASGRYLCSSPAIRVSDIVNILKTEYPTYTYPQK 368
ASGRY+C + ++V IL +P Y P K
Sbjct: 473 ASGRYICFEKMLHRGEVVEILAKFFPEYPIPTK 375
Score = 56.5 bits (117), Expect(2) = 2e-026
Identities = 25/70 (35%), Positives = 34/70 (48%)
Frame = -2 / -2
Query: 859 ACYEAKAKRXXXXXXXXXVFNNPDWPKGEAFTEDSWSDGEYCRKNEEWYFLSKTLAEHEA 680
A EAK +R V+ +P+ E WSD EYC+ + WY KT+AE A
Sbjct: 865 AASEAKVRRVVFTSSIGTVYMDPNRSPDVVVDESCWSDLEYCKNTKNWYCYGKTVAEQVA 686
Query: 679 FAYAAKTGLD 650
+ A K G+D
Sbjct: 685 WDVAKKKGVD 656
>gb|CX658554.1|CX658554 PO01036D06 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO01036D06 5', mRNA sequence
Length = 636
Score = 91.3 bits (193), Expect(2) = 3e-026
Identities = 41/100 (41%), Positives = 56/100 (56%)
Frame = -2 / +3
Query: 802 FNNPDWPKGEAFTEDSWSDGEYCRKNEEWYFLSKTLAEHEAFAYAAKTGLDIVTICPSLV 623
FN E +SD +C N+ WY SKTLAE A+ +A +TG+D+VTI P V
Sbjct: 33 FNGKPLTPDVVVDETWFSDSVFCVSNKLWYMASKTLAEEAAWKFAKETGIDMVTINPGFV 212
Query: 622 IGPLLQPAVNTSVKVFLSYIKGDQEIVKDGPKNLVDVRDV 503
IGPLLQP +N+S ++FL +I G + P + DV
Sbjct: 213 IGPLLQPTLNSSAELFLDHINGGAQGAPRLPSEIYRFVDV 332
Score = 47.3 bits (97), Expect(2) = 3e-026
Identities = 25/51 (49%), Positives = 27/51 (52%)
Frame = -2 / +3
Query: 520 VDVRDVAGALLLAYENLQASGRYLCSSPAIRVSDIVNILKTEYPTYTYPQK 368
VDVRDVA A + A E ASGRY VSD V I YPT P+K
Sbjct: 324 VDVRDVAYAHIQALEIPSASGRYCLVGRVTNVSDAVKIAHELYPTLPLPEK 476
>emb|AJ295838.1|PTR295838 Populus balsamifera subsp. trichocarpa ccr gene for cinnamoyl-CoA
reductase, exons 1-5
Length = 4044
Score = 112 bits (240), Expect(2) = 7e-026
Identities = 49/119 (41%), Positives = 68/119 (57%)
Frame = -2 / +1
Query: 724 EEWYFLSKTLAEHEAFAYAAKTGLDIVTICPSLVIGPLLQPAVNTSVKVFLSYIKGDQEI 545
+ WY K +AE A+ A + G+D+V + P LV+GPLLQP VN S+ L Y+ G +
Sbjct: 2059 QNWYCYGKAVAEQAAWDMAKEKGVDLVVVNPVLVLGPLLQPTVNASITHILKYLTGSAKT 2238
Query: 544 VKDGPKNLVDVRDVAGALLLAYENLQASGRYLCSSPAIRVSDIVNILKTEYPTYTYPQK 368
+ + V VRDVA A +L +E ASGRYLCS + ++V IL +P Y P K
Sbjct: 2239 YANSVQAYVHVRDVALAHILVFETPSASGRYLCSESVLHRGEVVEILAKFFPEYPIPTK 2415
Score = 29.5 bits (58), Expect(2) = 7e-026
Identities = 13/46 (28%), Positives = 20/46 (43%)
Frame = -2 / +2
Query: 859 ACYEAKAKRXXXXXXXXXVFNNPDWPKGEAFTEDSWSDGEYCRKNE 722
A EAK +R V+ +P+ E WSD E+C+ +
Sbjct: 1625 AAAEAKVRRVVFTSSIGAVYMDPNKGPDVVIDESCWSDLEFCKNTK 1762
>gb|CV242405.1|CV242405 WS02514.B21.1_P14 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02514_P14 3', mRNA sequence
Length = 898
Score = 80.8 bits (170), Expect(2) = 1e-025
Identities = 29/69 (42%), Positives = 46/69 (66%)
Frame = -2 / -2
Query: 763 EDSWSDGEYCRKNEEWYFLSKTLAEHEAFAYAAKTGLDIVTICPSLVIGPLLQPAVNTSV 584
E WSD EYC++ + WY +KT+ E EA+ A + G+D+V + PS V+GPLL P +++
Sbjct: 756 ESHWSDPEYCKRYDLWYAYAKTIGEKEAWRSAKENGIDLVVVNPSFVVGPLLAPQPTSTL 577
Query: 583 KVFLSYIKG 557
+ L+ +KG
Sbjct: 576 LLILAIVKG 550
Score = 56.1 bits (116), Expect(2) = 1e-025
Identities = 26/85 (30%), Positives = 43/85 (50%)
Frame = -2 / -2
Query: 520 VDVRDVAGALLLAYENLQASGRYLCSSPAIRVSDIVNILKTEYPTYTYPQKFVEAEGSNT 341
V + DV A +LA E+ +ASGR +CS S+I+ +L+ +YP+Y Y K +G
Sbjct: 513 VHIDDVVAAHILAMEDKKASGRLVCSGSVAHWSEIIEMLRAKYPSYPYENKCSSQKGDCN 334
Query: 340 YNTEKLRKLGWTSRPMEDTLRDSIE 266
++ K+ P TL + +
Sbjct: 333 PHSMDTTKIATLGFPPFKTLEEMFD 259
>gb|CV276161.1|CV276161 WS0178.B21.1_N12 PTxD-NR-A-8 Populus trichocarpa x Populus
deltoides cDNA clone WS0178_N12 3', mRNA sequence
Length = 890
Score = 86.3 bits (182), Expect(2) = 1e-025
Identities = 36/82 (43%), Positives = 49/82 (59%)
Frame = -2 / -2
Query: 802 FNNPDWPKGEAFTEDSWSDGEYCRKNEEWYFLSKTLAEHEAFAYAAKTGLDIVTICPSLV 623
FN E +SD ++C K++ WY LSKTLAE A+ + + G+D+VT+ P LV
Sbjct: 796 FNGKSLAPDVVVDETWFSDSDFCEKSKLWYHLSKTLAEEAAWKFTKENGIDMVTLNPGLV 617
Query: 622 IGPLLQPAVNTSVKVFLSYIKG 557
IGPLLQP +N S + L I G
Sbjct: 616 IGPLLQPTLNQSAESVLDLING 551
Score = 50.6 bits (104), Expect(2) = 1e-025
Identities = 24/51 (47%), Positives = 29/51 (56%)
Frame = -2 / -2
Query: 520 VDVRDVAGALLLAYENLQASGRYLCSSPAIRVSDIVNILKTEYPTYTYPQK 368
VDVRDVA A + A EN A+GRY I S+ V IL YP T P++
Sbjct: 517 VDVRDVANAHIYALENPSANGRYCLVGTVIHSSEAVKILSKLYPDLTIPKQ 365
>gb|DT492194.1|DT492194 WS02549.C21_O15 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02549_O15 3', mRNA sequence
Length = 884
Score = 86.3 bits (182), Expect(2) = 1e-025
Identities = 36/82 (43%), Positives = 49/82 (59%)
Frame = -2 / -2
Query: 802 FNNPDWPKGEAFTEDSWSDGEYCRKNEEWYFLSKTLAEHEAFAYAAKTGLDIVTICPSLV 623
FN E +SD ++C K++ WY LSKTLAE A+ + + G+D+VT+ P LV
Sbjct: 784 FNGKSLAPDVVVDETWFSDSDFCEKSKLWYHLSKTLAEEAAWKFTKENGIDMVTLNPGLV 605
Query: 622 IGPLLQPAVNTSVKVFLSYIKG 557
IGPLLQP +N S + L I G
Sbjct: 604 IGPLLQPTLNQSAESVLDLING 539
Score = 50.6 bits (104), Expect(2) = 1e-025
Identities = 24/51 (47%), Positives = 29/51 (56%)
Frame = -2 / -2
Query: 520 VDVRDVAGALLLAYENLQASGRYLCSSPAIRVSDIVNILKTEYPTYTYPQK 368
VDVRDVA A + A EN A+GRY I S+ V IL YP T P++
Sbjct: 505 VDVRDVANAHIYALENPSANGRYCLVGTVIHSSEAVKILSKLYPDLTIPKQ 353
>gb|CV237437.1|CV237437 WS01227.B21.1_P20 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01227_P20 3', mRNA sequence
Length = 865
Score = 86.3 bits (182), Expect(2) = 1e-025
Identities = 36/82 (43%), Positives = 49/82 (59%)
Frame = -2 / -3
Query: 802 FNNPDWPKGEAFTEDSWSDGEYCRKNEEWYFLSKTLAEHEAFAYAAKTGLDIVTICPSLV 623
FN E +SD ++C K++ WY LSKTLAE A+ + + G+D+VT+ P LV
Sbjct: 824 FNGKSLAPDVVVDETWFSDSDFCEKSKLWYHLSKTLAEEAAWKFTKENGIDMVTLNPGLV 645
Query: 622 IGPLLQPAVNTSVKVFLSYIKG 557
IGPLLQP +N S + L I G
Sbjct: 644 IGPLLQPTLNQSAESVLDLING 579
Score = 50.6 bits (104), Expect(2) = 1e-025
Identities = 24/51 (47%), Positives = 29/51 (56%)
Frame = -2 / -3
Query: 520 VDVRDVAGALLLAYENLQASGRYLCSSPAIRVSDIVNILKTEYPTYTYPQK 368
VDVRDVA A + A EN A+GRY I S+ V IL YP T P++
Sbjct: 545 VDVRDVANAHIYALENPSANGRYCLVGTVIHSSEAVKILSKLYPDLTIPKQ 393
>gb|BU811708.1|BU811708 UL87TD06 Populus leaf cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 541
Score = 116 bits (249), Expect = 1e-025
Identities = 51/153 (33%), Positives = 82/153 (53%)
Frame = -2 / +3
Query: 733 RKNEEWYFLSKTLAEHEAFAYAAKTGLDIVTICPSLVIGPLLQPAVNTSVKVFLSYIKGD 554
+++ WY +KT+AE EA+ + + G+D+V+ PS V+GPLL P N+++ + S +KG
Sbjct: 3 KRHNLWYAYAKTVAEKEAWRVSKENGIDLVSFIPSFVVGPLLAPEPNSTLLLIQSIVKGS 182
Query: 553 QEIVKDGPKNLVDVRDVAGALLLAYENLQASGRYLCSSPAIRVSDIVNILKTEYPTYTYP 374
+ + + DV +LA EN +ASGR LCS S I+ +L+ +YP+Y Y
Sbjct: 183 RGEYPNMTVGFTHIDDVVAGSILAMENSEASGRLLCSGQVAHWSQIIEMLRAKYPSYPYE 362
Query: 373 QKFVEAEGSNTYNTEKLRKLGWTSRPMEDTLRD 275
K EG N ++ K+ P TL +
Sbjct: 363 NKCSSQEGDNNPHSMDTTKIAQLGLPPFKTLEE 461
>gb|AJ779812.1|AJ779812 AJ779812 Populus euphratica root 3-6 months Populus euphratica cDNA
clone P0000800008A03F1, mRNA sequence
Length = 623
Score = 116 bits (249), Expect = 1e-025
Identities = 49/127 (38%), Positives = 76/127 (59%)
Frame = -2 / +3
Query: 763 EDSWSDGEYCRKNEEWYFLSKTLAEHEAFAYAAKTGLDIVTICPSLVIGPLLQPAVNTSV 584
E SW+D +YC+ ++WY +SKTLAE A+ +A + +D+V I P+ +GPLLQPA+N S
Sbjct: 18 ESSWTDLDYCKSRQKWYPVSKTLAEKAAWEFAGRNAMDVVEIHPATCLGPLLQPALNASC 197
Query: 583 KVFLSYIKGDQEIVKDGPKNLVDVRDVAGALLLAYENLQASGRYLCSSPAIRVSDIVNIL 404
V ++G ++ + V VRDVA A +L +E ASGRYLC++ + D +
Sbjct: 198 AVLQQLLQGSRDTQEYHWLGAVHVRDVAMAQVLLFETPTASGRYLCTNGIYQFGDFAATV 377
Query: 403 KTEYPTY 383
+P +
Sbjct: 378 SRLFPEF 398
>gb|DV463065.1|DV463065 MTUNUL1.P11.C04 NUL Populus fremontii x Populus angustifolia cDNA,
mRNA sequence
Length = 796
Score = 116 bits (249), Expect = 1e-025
Identities = 51/148 (34%), Positives = 79/148 (53%)
Frame = -2 / +1
Query: 847 AKAKRXXXXXXXXXVFNNPDWPKGEAFTEDSWSDGEYCRKNEEWYFLSKTLAEHEAFAYA 668
+ KR V D P+ + E WSD EYC+++ WY +KT+AE EA+ +
Sbjct: 352 SSVKRVVFTSSSSTVRYRDDTPQIFSLNESHWSDTEYCKRHNLWYAYAKTVAEKEAWRVS 531
Query: 667 AKTGLDIVTICPSLVIGPLLQPAVNTSVKVFLSYIKGDQEIVKDGPKNLVDVRDVAGALL 488
+ G+D+V+ PS V+GPLL P N+++ + S +KG + + + DV +
Sbjct: 532 KENGIDLVSFIPSFVVGPLLAPEPNSTLLLIQSVVKGSRGEYPNMTVGFTHIDDVVAGNI 711
Query: 487 LAYENLQASGRYLCSSPAIRVSDIVNIL 404
LA EN +ASGR +CS P S I+ +L
Sbjct: 712 LAMENSEASGRLVCSGPVAHWSQIIKML 795
>gb|DT488885.1|DT488885 WS02537.B21_L11 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02537_L11 3', mRNA sequence
Length = 854
Score = 80.8 bits (170), Expect(2) = 1e-025
Identities = 33/69 (47%), Positives = 46/69 (66%)
Frame = -2 / -1
Query: 763 EDSWSDGEYCRKNEEWYFLSKTLAEHEAFAYAAKTGLDIVTICPSLVIGPLLQPAVNTSV 584
E +SD C++ + WY LSKTLAE A+ +A + D+VT+ PS VIGPLLQP +N SV
Sbjct: 719 ETWYSDPAICKELKAWYALSKTLAEEAAWNFAKENATDLVTVHPSFVIGPLLQPTLNLSV 540
Query: 583 KVFLSYIKG 557
++ L + G
Sbjct: 539 EMILDLVNG 513
Score = 55.6 bits (115), Expect(2) = 1e-025
Identities = 24/65 (36%), Positives = 38/65 (58%)
Frame = -2 / -1
Query: 550 EIVKDGPKNLVDVRDVAGALLLAYENLQASGRYLCSSPAIRVSDIVNILKTEYPTYTYPQ 371
E +G +DVRDVA A + A+E ASGRY+ ++ S+++ I++ YPT P+
Sbjct: 509 ETYPNGYYRCIDVRDVANAHIQAFEIPSASGRYVLTAYVTTFSEVLKIIRENYPTLRLPE 330
Query: 370 KFVEA 356
K E+
Sbjct: 329 KSTES 315
>gb|DT480386.1|DT480386 WS02528.BR_M02 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02528_M02 5', mRNA sequence
Length = 839
Score = 90.9 bits (192), Expect(2) = 2e-025
Identities = 37/82 (45%), Positives = 54/82 (65%)
Frame = -2 / +2
Query: 598 VNTSVKVFLSYIKGDQEIVKDGPKNLVDVRDVAGALLLAYENLQASGRYLCSSPAIRVSD 419
VN S V + +K + +++ + ++DVRDV ALLLAYE +A GRY+C++ AIRV D
Sbjct: 2 VNASTMVLIKILKDGCDSLENKLRPIIDVRDVTEALLLAYETPEAEGRYICTAHAIRVKD 181
Query: 418 IVNILKTEYPTYTYPQKFVEAE 353
+V L++ YP Y YP+ F E E
Sbjct: 182 LVEKLRSMYPNYNYPKSFTEEE 247
Score = 45.5 bits (93), Expect(2) = 2e-025
Identities = 17/34 (50%), Positives = 28/34 (82%)
Frame = -2 / +2
Query: 337 NTEKLRKLGWTSRPMEDTLRDSIECYRAMGILN* 236
++EKL++LGW+ R +E+TL DS+E Y+ G+L+*
Sbjct: 266 SSEKLQRLGWSFRSLEETLIDSVENYQKTGLLD* 367
>gb|CX178853.1|CX178853 D05_45-4_07.ab1 leaf inoculated with Marssonia pathogen of Populus
euramericana Populus x canadensis cDNA, mRNA sequence
Length = 576
Score = 116 bits (247), Expect = 3e-025
Identities = 52/121 (42%), Positives = 70/121 (57%)
Frame = -2 / -2
Query: 604 PAVNTSVKVFLSYIKGDQEIVKDGPKNLVDVRDVAGALLLAYENLQASGRYLCSSPAIRV 425
P +N+S LSY+K E + G ++ VDVRD A ALLL YE +A GRY+CSS I
Sbjct: 575 PTMNSSSLYLLSYLKDGLETLDSGTRSFVDVRDTAKALLLIYEKDEAEGRYICSSHDITT 396
Query: 424 SDIVNILKTEYPTYTYPQKFVEAEGSNTYNTEKLRKLGWTSRPMEDTLRDSIECYRAMGI 245
D+ LK YP Y YP+ F S ++EKL LGW R +E++L D+++ Y G
Sbjct: 395 QDLAEKLKAMYPHYNYPKSFSGGMPSMDMSSEKLLNLGWKYRSLEESLVDAVKNYEERGD 216
Query: 244 L 242
L
Sbjct: 215 L 213
Database: Populus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:49 PM
Number of letters in database: 203,408,664
Number of sequences in database: 369,679
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 414,201,997
Number of Sequences: 369679
Number of extensions: 6116577
Number of successful extensions: 83681
Number of sequences better than 1.0e-020: 79
length of database: 67,802,888
effective HSP length: 52
effective length of database: 48,579,580
effective search space used: 11416201300
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)