TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3204680.2.1
(672 letters)
Database: Populus_nucl_with_EST.fasta
369,679 sequences; 203,408,664 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CN520678.1|CN520678 GQ0105.B3_G08 GQ010 Populus trichoca... 373 e-103
gb|DT516698.1|DT516698 WS02432.B21_C13 PTxD-ICC-N-A-14 Popu... 373 e-103
gb|DR448910.1|DR448910 qi3 Populus simonii Carr Populus sim... 345 2e-094
gb|BU897901.1|BU897901 X071F05 Populus wood cDNA library Po... 224 8e-090
gb|CF234427.1|CF234427 Ptajxojxo2E10E1010 Poplar cDNA libra... 296 1e-079
gb|CK102426.1|CK102426 G077P24.5pR Populus tension wood cDN... 272 9e-079
gb|DT479200.1|DT479200 WS02525.BR_A24 PT-MB-N-A-15 Populus ... 284 5e-076
gb|DT484312.1|DT484312 WS02525.B21_A24 PT-MB-N-A-15 Populus... 284 5e-076
gb|DT508385.1|DT508385 WS02420.BR_N08 PTxD-ICC-N-A-14 Popul... 284 5e-076
gb|DT512995.1|DT512995 WS02420.B21_N08 PTxD-ICC-N-A-14 Popu... 284 5e-076
gb|CK088015.1|CK088015 A031P29.3pR Hybrid aspen plasmid lib... 281 3e-075
gb|CV255453.1|CV255453 WS02414.B21_A22 PTxD-ICC-N-A-14 Popu... 280 6e-075
gb|CN522880.1|CN522880 GQ0122.B3_M23 GQ012 Populus trichoca... 272 1e-072
gb|BU862883.1|BU862883 S021B03 Populus imbibed seed cDNA li... 272 2e-072
gb|BU865374.1|BU865374 S052H04 Populus imbibed seed cDNA li... 272 2e-072
gb|BU894809.1|BU894809 X015C11 Populus wood cDNA library Po... 261 3e-069
gb|CX657151.1|CX657151 PO02030H12 Poplar SC cDNA library Po... 221 5e-057
gb|CK087727.1|CK087727 A019P11.3pR Hybrid aspen plasmid lib... 201 4e-051
gb|AI163062.1|AI163062 A031p29u Hybrid aspen plasmid librar... 145 4e-042
gb|CX658497.1|CX658497 PO01035G05 Poplar SC cDNA library Po... 162 2e-039
gb|CV265001.1|CV265001 WS02026.B21_B01 PTxN-IB-N-A-11 Popul... 132 3e-039
gb|DT523819.1|DT523819 WS02040.B21_L16 PTxN-IB-N-A-11 Popul... 132 3e-039
gb|CV276058.1|CV276058 WS0178.B21.1_H22 PTxD-NR-A-8 Populus... 131 3e-039
gb|CX656688.1|CX656688 PO02022C11 Poplar SC cDNA library Po... 160 6e-039
gb|BU885984.1|BU885984 R038H11 Populus root cDNA library Po... 143 2e-037
gb|BU884373.1|BU884373 R009G07 Populus root cDNA library Po... 146 1e-034
gb|CV258894.1|CV258894 WS0201.B21_M19 PTxN-IB-N-A-11 Populu... 118 7e-033
gb|CX182528.1|CX182528 H02_45-85_16.ab1 leaf inoculated wit... 140 9e-033
gb|CX656419.1|CX656419 PO01001D08 Poplar SC cDNA library Po... 118 1e-032
gb|CA934253.1|CA934253 MTU3TS.P5.B08 Aspen stem cDNA Librar... 116 1e-032
gb|CA933918.1|CA933918 MTU3TS.P14.D04 Aspen stem cDNA Libra... 116 2e-032
gb|DN488090.1|DN488090 R032A09.3pR Populus root cDNA librar... 117 3e-032
gb|CA927044.1|CA927044 MTU6CR.P4.C03 Aspen root cDNA Librar... 114 6e-032
gb|AJ776291.1|AJ776291 AJ776291 Populus euphratica root 3-6... 130 7e-030
gb|CB240336.1|CB240336 PopSC00315 Poplar SC cDNA library Po... 106 9e-030
gb|DN497770.1|DN497770 R032A09.5pR Populus root cDNA librar... 112 1e-029
gb|CA926209.1|CA926209 MTU6CR.P11.C07 Aspen root cDNA Libra... 128 4e-029
gb|AJ774952.1|AJ774952 AJ774952 Populus euphratica shoot 3-... 125 2e-028
gb|DT484480.1|DT484480 WS02525.B21_I14 PT-MB-N-A-15 Populus... 124 6e-028
gb|CV240954.1|CV240954 WS02510.B21_N03 PT-MB-N-A-15 Populus... 118 3e-026
gb|CX173811.1|CX173811 C01_69-21_05.ab1 leaf inoculated wit... 118 3e-026
gb|CV228282.1|CV228282 WS0191.B21_J20 PT-DX-N-A-10 Populus ... 117 5e-026
gb|CK089237.1|CK089237 B006P10.3pR Hybrid aspen plasmid lib... 116 1e-025
gb|DT485951.1|DT485951 WS02529.B21_J22 PT-MB-N-A-15 Populus... 114 7e-025
gb|CV272891.1|CV272891 WS0171.B21_A11 PTxD-NR-A-8 Populus t... 113 9e-025
gb|BP935724.1|BP935724 BP935724 full-length enriched poplar... 113 1e-024
gb|CX658837.1|CX658837 PO01022H11 Poplar SC cDNA library Po... 111 3e-024
gb|CA926423.1|CA926423 MTU6CR.P14.H04 Aspen root cDNA Libra... 111 6e-024
gb|DT479341.1|DT479341 WS02525.BR_I14 PT-MB-N-A-15 Populus ... 109 2e-023
gb|CX172457.1|CX172457 C02_69-2_06.ab1 leaf inoculated with... 85 8e-023
gb|CX177966.1|CX177966 F04_45-113_12.ab1 leaf inoculated wi... 92 2e-022
gb|CX179866.1|CX179866 E06_45-82_10.ab1 leaf inoculated wit... 92 2e-022
gb|CX182471.1|CX182471 B01_45-90_03.ab1 leaf inoculated wit... 92 2e-022
gb|CX184042.1|CX184042 H09_45-84_15.ab1 leaf inoculated wit... 92 2e-022
gb|CX182180.1|CX182180 C01_45-23_05.ab1 leaf inoculated wit... 92 2e-022
gb|CX282510.1|CX282510 15.1.12 Populus tremula X Populus al... 105 2e-022
gb|CA932458.1|CA932458 MTU5CS.P13.C03 Aspen stem cDNA Libra... 105 4e-022
gb|CN524579.1|CN524579 GQ015M13.T3_C09 GQ015 Populus tricho... 104 5e-022
gb|BU832899.1|BU832899 T039E09 Populus apical shoot cDNA li... 102 3e-021
gb|DT512426.1|DT512426 WS02419.B21_D24 PTxD-ICC-N-A-14 Popu... 81 6e-021
gb|CN524204.1|CN524204 GQ015M02.T3_D08 GQ015 Populus tricho... 81 6e-021
>gb|CN520678.1|CN520678 GQ0105.B3_G08 GQ010 Populus trichocarpa x Populus deltoides cDNA
clone GQ0105_G08 5', mRNA sequence
Length = 757
Score = 373 bits (808), Expect = e-103
Identities = 143/185 (77%), Positives = 164/185 (88%)
Frame = +1 / +2
Query: 4 RVKVSDPLEEGCRLGPVVSEGQYEKIKKFISNAKSQGATILTGGVRPAHLEKGFFIEPTI 183
++K+SDP EEGCRLGPVVS GQYEK+ +FI+ A+S+GATIL+GG RP H KGFF+EPTI
Sbjct: 140 KIKISDPFEEGCRLGPVVSGGQYEKVLEFIATARSEGATILSGGDRPKHFTKGFFVEPTI 319
Query: 184 ITDITTSMEIWREEVFGPVLCVKEFSTEDEAIELANDTQYGLAGAVISGDRERCQRLSEE 363
ITD+TTSM+IWREEVFGPVLCVK FSTEDEAIELANDT YGL AVIS D ERC R+++
Sbjct: 320 ITDVTTSMQIWREEVFGPVLCVKTFSTEDEAIELANDTHYGLGAAVISNDLERCDRVTKA 499
Query: 364 IDAGCIWVNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLSVKQVTEYISDEPWGWYQS 543
AG +W+NCSQPCFCQAPWGG KRSGFGRELGE G++NYLSVKQVT+YISDEPWGWYQS
Sbjct: 500 FRAGIVWINCSQPCFCQAPWGGIKRSGFGRELGEWGLENYLSVKQVTQYISDEPWGWYQS 679
Query: 544 PSKL* 558
P+KL*
Sbjct: 680 PAKL* 694
Score = 123 bits (263), Expect(2) = 5e-037
Identities = 62/137 (45%), Positives = 69/137 (50%)
Frame = -2 / -2
Query: 419 GAWQKQGCEQFTQMHPASISSDNLWQRSRSPEITAPAKPYCXXXXXXXXXXXXXXXLTHR 240
GA QK GCEQ PA + SRS +ITA KP LTHR
Sbjct: 555 GA*QKHGCEQLIHTIPARKALVTRSHLSRSFDITAAPKP*WVSFANSMASSSVLNVLTHR 376
Query: 239 TGPKTXXXXXXXXXXXXXXXXXXIKNPFSRCAGLTPPVRIVAPWLLAFDMNFLIFSYCPS 60
TGPKT KNP +C G +PP+++VAP LLA MN FSYCP
Sbjct: 375 TGPKTSSLQICMEVVTSVMMVGSTKNPLVKCLGRSPPLKMVAPSLLAVAMNSNTFSYCPP 196
Query: 59 LTTGPSLQPSSSGSETL 9
LTTGPSLQPSS GSE L
Sbjct: 195 LTTGPSLQPSSKGSEIL 145
Score = 68.9 bits (144), Expect(3) = 1e-023
Identities = 30/57 (52%), Positives = 38/57 (66%)
Frame = -1 / -1
Query: 318 STSQTILCIVGKFDGFIFSAKFFNAQDWTKDFLPPDFH*CGDISNNSWFNKEPLLKM 148
S+S I+ ++ +FDGFIFS K FN Q+ K+F PD H ISN+ WFNKE L KM
Sbjct: 454 SSS*AIMGVICQFDGFIFSTKCFNTQNRPKNFFSPDLHGGRYISNDGWFNKESLGKM 284
Score = 51.0 bits (105), Expect(2) = 5e-037
Identities = 17/23 (73%), Positives = 19/23 (82%)
Frame = -2 / -2
Query: 557 YSLEGDWYHPHGSSEMYSVTCLT 489
YSL GDWY PHGSS++Y VTC T
Sbjct: 693 YSLAGDWYQPHGSSDIYCVTCFT 625
Score = 49.2 bits (101), Expect(3) = 1e-023
Identities = 25/57 (43%), Positives = 31/57 (54%)
Frame = -1 / -1
Query: 552 LGGGLVPSPXXXXXXXXXXXDAQVVINAPFSKLTSKSTALVPAPGSLAEAGLRAVYP 382
LGG LVP+P QV+ +PFS T K+TAL +P SL EA L A+ P
Sbjct: 688 LGGRLVPTPWFIRYILRYLLHTQVIFKSPFS*FTPKTTALNASPWSLTEAWL*AIDP 518
Score = 29.0 bits (57), Expect(3) = 1e-023
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = -1 / -1
Query: 75 LILSFTNNWPKPATLFKWIRNLN 7
LIL TNN KP T F+ I N N
Sbjct: 211 LILPSTNNRAKPTTFFERIGNFN 143
>gb|DT516698.1|DT516698 WS02432.B21_C13 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02432_C13 3', mRNA sequence
Length = 914
Score = 373 bits (808), Expect = e-103
Identities = 143/185 (77%), Positives = 164/185 (88%)
Frame = +1 / -2
Query: 4 RVKVSDPLEEGCRLGPVVSEGQYEKIKKFISNAKSQGATILTGGVRPAHLEKGFFIEPTI 183
++K+SDP EEGCRLGPVVS GQYEK+ +FI+ A+S+GATIL+GG RP H KGFF+EPTI
Sbjct: 856 KIKISDPFEEGCRLGPVVSGGQYEKVLEFIATARSEGATILSGGDRPKHFTKGFFVEPTI 677
Query: 184 ITDITTSMEIWREEVFGPVLCVKEFSTEDEAIELANDTQYGLAGAVISGDRERCQRLSEE 363
ITD+TTSM+IWREEVFGPVLCVK FSTEDEAIELANDT YGL AVIS D ERC R+++
Sbjct: 676 ITDVTTSMQIWREEVFGPVLCVKTFSTEDEAIELANDTHYGLGAAVISNDLERCDRVTKA 497
Query: 364 IDAGCIWVNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLSVKQVTEYISDEPWGWYQS 543
AG +W+NCSQPCFCQAPWGG KRSGFGRELGE G++NYLSVKQVT+YISDEPWGWYQS
Sbjct: 496 FRAGIVWINCSQPCFCQAPWGGIKRSGFGRELGEWGLENYLSVKQVTQYISDEPWGWYQS 317
Query: 544 PSKL* 558
P+KL*
Sbjct: 316 PAKL* 302
Score = 123 bits (263), Expect(2) = 5e-037
Identities = 62/137 (45%), Positives = 69/137 (50%)
Frame = -2 / +3
Query: 419 GAWQKQGCEQFTQMHPASISSDNLWQRSRSPEITAPAKPYCXXXXXXXXXXXXXXXLTHR 240
GA QK GCEQ PA + SRS +ITA KP LTHR
Sbjct: 441 GA*QKHGCEQLIHTIPARKALVTRSHLSRSFDITAAPKP*WVSFANSMASSSVLNVLTHR 620
Query: 239 TGPKTXXXXXXXXXXXXXXXXXXIKNPFSRCAGLTPPVRIVAPWLLAFDMNFLIFSYCPS 60
TGPKT KNP +C G +PP+++VAP LLA MN FSYCP
Sbjct: 621 TGPKTSSLQICMEVVTSVMMVGSTKNPLVKCLGRSPPLKMVAPSLLAVAMNSNTFSYCPP 800
Query: 59 LTTGPSLQPSSSGSETL 9
LTTGPSLQPSS GSE L
Sbjct: 801 LTTGPSLQPSSKGSEIL 851
Score = 68.9 bits (144), Expect(3) = 1e-023
Identities = 30/57 (52%), Positives = 38/57 (66%)
Frame = -1 / +2
Query: 318 STSQTILCIVGKFDGFIFSAKFFNAQDWTKDFLPPDFH*CGDISNNSWFNKEPLLKM 148
S+S I+ ++ +FDGFIFS K FN Q+ K+F PD H ISN+ WFNKE L KM
Sbjct: 542 SSS*AIMGVICQFDGFIFSTKCFNTQNRPKNFFSPDLHGGRYISNDGWFNKESLGKM 712
Score = 51.0 bits (105), Expect(2) = 5e-037
Identities = 17/23 (73%), Positives = 19/23 (82%)
Frame = -2 / +3
Query: 557 YSLEGDWYHPHGSSEMYSVTCLT 489
YSL GDWY PHGSS++Y VTC T
Sbjct: 303 YSLAGDWYQPHGSSDIYCVTCFT 371
Score = 49.2 bits (101), Expect(3) = 1e-023
Identities = 25/57 (43%), Positives = 31/57 (54%)
Frame = -1 / +2
Query: 552 LGGGLVPSPXXXXXXXXXXXDAQVVINAPFSKLTSKSTALVPAPGSLAEAGLRAVYP 382
LGG LVP+P QV+ +PFS T K+TAL +P SL EA L A+ P
Sbjct: 308 LGGRLVPTPWFIRYILRYLLHTQVIFKSPFS*FTPKTTALNASPWSLTEAWL*AIDP 478
Score = 29.0 bits (57), Expect(3) = 1e-023
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = -1 / +2
Query: 75 LILSFTNNWPKPATLFKWIRNLN 7
LIL TNN KP T F+ I N N
Sbjct: 785 LILPSTNNRAKPTTFFERIGNFN 853
>gb|DR448910.1|DR448910 qi3 Populus simonii Carr Populus simonii cDNA similar to betaine
aldehyde dehydrogenase (BADH) of Populus simonii Carr,
mRNA sequence
Length = 1491
Score = 345 bits (747), Expect = 2e-094
Identities = 130/181 (71%), Positives = 154/181 (85%)
Frame = +1 / +1
Query: 4 RVKVSDPLEEGCRLGPVVSEGQYEKIKKFISNAKSQGATILTGGVRPAHLEKGFFIEPTI 183
++K+SDPLEEGCRLGP+VS QYEK+ K+IS AK +GATIL GG RP HLEKG+F++PTI
Sbjct: 946 KIKISDPLEEGCRLGPIVSRRQYEKVMKYISTAKEEGATILCGGARPEHLEKGYFVQPTI 1125
Query: 184 ITDITTSMEIWREEVFGPVLCVKEFSTEDEAIELANDTQYGLAGAVISGDRERCQRLSEE 363
ITD+ TSM+IW EEVFGPVL VK F+TEDEA+ELANDT YGLA AVIS D +RC+R+++
Sbjct: 1126 ITDVKTSMQIWIEEVFGPVLWVKTFATEDEAVELANDTHYGLAAAVISKDLDRCERMAKA 1305
Query: 364 IDAGCIWVNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLSVKQVTEYISDEPWGWYQS 543
G +WVNCSQPCF QAPWGG KRSGFGRELGE G+D YL+VKQVT Y+S EPWGWY+S
Sbjct: 1306 FQVGAVWVNCSQPCFYQAPWGGKKRSGFGRELGERGLDIYLNVKQVTRYVSSEPWGWYKS 1485
Query: 544 P 546
P
Sbjct: 1486 P 1488
Score = 106 bits (227), Expect(2) = 1e-040
Identities = 54/131 (41%), Positives = 72/131 (54%)
Frame = -1 / -1
Query: 540 LVPSPXXXXXXXXXXXDAQVVINAPFSKLTSKSTALVPAPGSLAEAGLRAVYPDASSVNL 361
LVP+P QV + +PF K T K+T+L +P L EA L AV PD S +
Sbjct: 1482 LVPTPWLTRNIPCDLLYVQVDVQSPFPKFTPKTTSLFASPWGLVEARL*AVDPDGSDLKC 1303
Query: 360 LR*PLATLPITRNYSTSQTILCIVGKFDGFIFSAKFFNAQDWTKDFLPPDFH*CGDISNN 181
L L + I R Y +S+TI+ I+ +F+GFIFS K FN ++ +K FL PD H + N
Sbjct: 1302 LSHSLTPIKILRYYCSSKTIMGIICQFNGFIFSCKCFNPKNRSKYFLYPDLHGSLHVCYN 1123
Query: 180 SWFNKEPLLKM 148
SW NK L M
Sbjct: 1122 SWLNKVTFL*M 1090
Score = 79.4 bits (167), Expect(2) = 1e-040
Identities = 33/53 (62%), Positives = 39/53 (73%)
Frame = -2 / -2
Query: 167 KNPFSRCAGLTPPVRIVAPWLLAFDMNFLIFSYCPSLTTGPSLQPSSSGSETL 9
K PFS+C+G PP +IVAP LA +M F+ FSYC LT GPSLQPSS GS+ L
Sbjct: 1109 K*PFSKCSGRAPPHKIVAPSSLAVEMYFITFSYCRRLTIGPSLQPSSKGSDIL 951
>gb|BU897901.1|BU897901 X071F05 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 709
Score = 224 bits (483), Expect(3) = 8e-090
Identities = 85/109 (77%), Positives = 96/109 (88%)
Frame = +1 / +2
Query: 202 SMEIWREEVFGPVLCVKEFSTEDEAIELANDTQYGLAGAVISGDRERCQRLSEEIDAGCI 381
SM+IWREEVFGPVLCVK FSTEDEAI+LANDT YGL AVIS D ERC R+++ AG +
Sbjct: 254 SMQIWREEVFGPVLCVKTFSTEDEAIDLANDTHYGLGAAVISDDPERCDRVAKAFRAGIV 433
Query: 382 WVNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLSVKQVTEYISDEPW 528
W+NCSQPCFCQAPWGG KRSGFGRELGE G++NYLSVKQVT+YIS+EPW
Sbjct: 434 WINCSQPCFCQAPWGGIKRSGFGRELGEWGLENYLSVKQVTQYISEEPW 580
Score = 119 bits (255), Expect(3) = 8e-090
Identities = 46/66 (69%), Positives = 57/66 (86%)
Frame = +1 / +1
Query: 4 RVKVSDPLEEGCRLGPVVSEGQYEKIKKFISNAKSQGATILTGGVRPAHLEKGFFIEPTI 183
++K+SDP +EGCRLGP+VS QY+KI KFI+ AKS+GATIL+GG RP HL KGFF+EPTI
Sbjct: 55 KIKISDPFKEGCRLGPLVSGEQYDKILKFIATAKSEGATILSGGDRPEHLNKGFFVEPTI 234
Query: 184 ITDITT 201
I D+TT
Sbjct: 235 IIDVTT 252
Score = 81.3 bits (171), Expect(4) = 1e-030
Identities = 33/53 (62%), Positives = 40/53 (75%)
Frame = -2 / -3
Query: 167 KNPFSRCAGLTPPVRIVAPWLLAFDMNFLIFSYCPSLTTGPSLQPSSSGSETL 9
KNP +C+G +PP+++VAP LLA MNF I SYC LT+GPSLQPS GSE L
Sbjct: 218 KNPLFKCSGRSPPLKMVAPSLLAVAMNFNILSYCSPLTSGPSLQPSLKGSEIL 60
Score = 39.1 bits (79), Expect(4) = 1e-030
Identities = 16/38 (42%), Positives = 24/38 (63%)
Frame = -1 / -1
Query: 318 STSQTILCIVGKFDGFIFSAKFFNAQDWTKDFLPPDFH 205
S+S I+ ++ + +GFIFS K FN + K+F PD H
Sbjct: 370 SSS*AIMGVICQINGFIFSTKCFNT*NRPKNFFSPDLH 257
Score = 39.1 bits (79), Expect(4) = 1e-030
Identities = 19/35 (54%), Positives = 23/35 (65%)
Frame = -1 / -1
Query: 483 VVINAPFSKLTSKSTALVPAPGSLAEAGLRAVYPD 379
VV +PFS T K+TAL +P SL EA L A+ PD
Sbjct: 535 VVFKSPFS*FTPKTTALNASPWSLTEAWL*AIDPD 431
Score = 28.6 bits (56), Expect(4) = 1e-030
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -2 / -2
Query: 566 LPVYSLEGDWYHPHGSSEMYSVTCLT 489
L + +L + HGSSE+Y VTC T
Sbjct: 618 LAIIALREPGTNXHGSSEIY*VTCFT 541
Score = 26.3 bits (51), Expect(3) = 8e-090
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = +1 / +3
Query: 529 GWYQSPSKL* 558
GWYQ+PSKL*
Sbjct: 582 GWYQAPSKL* 611
>gb|CF234427.1|CF234427 Ptajxojxo2E10E1010 Poplar cDNA library from young opposite xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 655
Score = 296 bits (640), Expect = 1e-079
Identities = 113/143 (79%), Positives = 126/143 (88%)
Frame = +1 / +1
Query: 130 GGVRPAHLEKGFFIEPTIITDITTSMEIWREEVFGPVLCVKEFSTEDEAIELANDTQYGL 309
GG RP H KGFF+EPTIITD+TTSM+IWREEVFGPVLCVK FS+EDEAIELANDT YGL
Sbjct: 4 GGDRPKHFTKGFFVEPTIITDVTTSMQIWREEVFGPVLCVKTFSSEDEAIELANDTHYGL 183
Query: 310 AGAVISGDRERCQRLSEEIDAGCIWVNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLS 489
AVIS D ERC R+++ AG +W+NCSQPCFCQAPWGG KRSGFGRELGE G++NYLS
Sbjct: 184 GAAVISNDLERCDRVTKAFRAGIVWINCSQPCFCQAPWGGIKRSGFGRELGEWGLENYLS 363
Query: 490 VKQVTEYISDEPWGWYQSPSKL* 558
VKQVT+YISDEPWGWYQSP+KL*
Sbjct: 364 VKQVTQYISDEPWGWYQSPAKL* 432
>gb|CK102426.1|CK102426 G077P24.5pR Populus tension wood cDNA library Populus tremula x
Populus tremuloides cDNA clone G077P24 5', mRNA sequence
Length = 501
Score = 272 bits (589), Expect(2) = 9e-079
Identities = 104/140 (74%), Positives = 121/140 (86%)
Frame = +1 / +2
Query: 64 GQYEKIKKFISNAKSQGATILTGGVRPAHLEKGFFIEPTIITDITTSMEIWREEVFGPVL 243
GQYEK+ +FI+ A+S+GATIL+GG RP H KGFF+EPTIITD+TTSM+IWREEVFGPVL
Sbjct: 5 GQYEKVLEFIATARSEGATILSGGDRPKHFTKGFFVEPTIITDVTTSMQIWREEVFGPVL 184
Query: 244 CVKEFSTEDEAIELANDTQYGLAGAVISGDRERCQRLSEEIDAGCIWVNCSQPCFCQAPW 423
CVK FS+EDEAIELANDT YGL AVIS D ERC R+++ AG +W+NCSQPCFCQAPW
Sbjct: 185 CVKTFSSEDEAIELANDTHYGLGAAVISNDLERCDRVTKAFRAGIVWINCSQPCFCQAPW 364
Query: 424 GGNKRSGFGRELGEGGIDNY 483
GG KRSGFGRELGE G++NY
Sbjct: 365 GGIKRSGFGRELGEWGLENY 424
Score = 90.4 bits (191), Expect(2) = 1e-021
Identities = 47/119 (39%), Positives = 54/119 (45%)
Frame = -2 / -1
Query: 419 GAWQKQGCEQFTQMHPASISSDNLWQRSRSPEITAPAKPYCXXXXXXXXXXXXXXXLTHR 240
GA QK GCEQ PA + SRS +ITA KP LTHR
Sbjct: 360 GA*QKHGCEQLIHTIPARKALVTRSHLSRSFDITAAPKP*WVSFANSMASSSELNVLTHR 181
Query: 239 TGPKTXXXXXXXXXXXXXXXXXXIKNPFSRCAGLTPPVRIVAPWLLAFDMNFLIFSYCP 63
TGPKT KNP +C G +PP+++VAP LLA MN FSYCP
Sbjct: 180 TGPKTSSLQICMEVVTSVMMVGSTKNPLVKCLGRSPPLKMVAPSLLAVAMNSNTFSYCP 4
Score = 41.4 bits (84), Expect(2) = 9e-079
Identities = 16/22 (72%), Positives = 18/22 (81%)
Frame = +1 / +3
Query: 466 GGIDNYLSVKQVTEYISDEPWG 531
G + LSVKQVT+YISDEPWG
Sbjct: 408 GDLKITLSVKQVTQYISDEPWG 473
Score = 32.7 bits (65), Expect(2) = 1e-021
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = -2 / -3
Query: 533 HPHGSSEMYSVTCLT 489
+PHGSSE+Y VTC T
Sbjct: 475 NPHGSSEIYCVTCFT 431
>gb|DT479200.1|DT479200 WS02525.BR_A24 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02525_A24 5', mRNA sequence
Length = 538
Score = 284 bits (614), Expect = 5e-076
Identities = 108/137 (78%), Positives = 121/137 (88%)
Frame = +1 / +2
Query: 148 HLEKGFFIEPTIITDITTSMEIWREEVFGPVLCVKEFSTEDEAIELANDTQYGLAGAVIS 327
HL KGFF+EPTII D+TTSM+IWREEVFGPVLCVK FSTEDEAI+LANDT YGL AVIS
Sbjct: 53 HLNKGFFVEPTIIIDVTTSMQIWREEVFGPVLCVKTFSTEDEAIDLANDTHYGLGAAVIS 232
Query: 328 GDRERCQRLSEEIDAGCIWVNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLSVKQVTE 507
D ERC R+++ AG +W+NCSQPCFCQAPWGG KRSGFGRELGE G++NYLSVKQVT
Sbjct: 233 NDPERCDRVAKAFRAGIVWINCSQPCFCQAPWGGIKRSGFGRELGEWGLENYLSVKQVTR 412
Query: 508 YISDEPWGWYQSPSKL* 558
YIS+EPWGWYQ+PSKL*
Sbjct: 413 YISEEPWGWYQAPSKL* 463
>gb|DT484312.1|DT484312 WS02525.B21_A24 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02525_A24 3', mRNA sequence
Length = 538
Score = 284 bits (614), Expect = 5e-076
Identities = 108/137 (78%), Positives = 121/137 (88%)
Frame = +1 / -2
Query: 148 HLEKGFFIEPTIITDITTSMEIWREEVFGPVLCVKEFSTEDEAIELANDTQYGLAGAVIS 327
HL KGFF+EPTII D+TTSM+IWREEVFGPVLCVK FSTEDEAI+LANDT YGL AVIS
Sbjct: 486 HLNKGFFVEPTIIIDVTTSMQIWREEVFGPVLCVKTFSTEDEAIDLANDTHYGLGAAVIS 307
Query: 328 GDRERCQRLSEEIDAGCIWVNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLSVKQVTE 507
D ERC R+++ AG +W+NCSQPCFCQAPWGG KRSGFGRELGE G++NYLSVKQVT
Sbjct: 306 NDPERCDRVAKAFRAGIVWINCSQPCFCQAPWGGIKRSGFGRELGEWGLENYLSVKQVTR 127
Query: 508 YISDEPWGWYQSPSKL* 558
YIS+EPWGWYQ+PSKL*
Sbjct: 126 YISEEPWGWYQAPSKL* 76
>gb|DT508385.1|DT508385 WS02420.BR_N08 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02420_N08 5', mRNA sequence
Length = 566
Score = 284 bits (614), Expect = 5e-076
Identities = 108/137 (78%), Positives = 121/137 (88%)
Frame = +1 / +3
Query: 148 HLEKGFFIEPTIITDITTSMEIWREEVFGPVLCVKEFSTEDEAIELANDTQYGLAGAVIS 327
HL KGFF+EPTII D+TTSM+IWREEVFGPVLCVK FSTEDEAI+LANDT YGL AVIS
Sbjct: 6 HLNKGFFVEPTIIIDVTTSMQIWREEVFGPVLCVKTFSTEDEAIDLANDTHYGLGAAVIS 185
Query: 328 GDRERCQRLSEEIDAGCIWVNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLSVKQVTE 507
D ERC R+++ AG +W+NCSQPCFCQAPWGG KRSGFGRELGE G++NYLSVKQVT
Sbjct: 186 NDPERCDRVAKAFRAGIVWINCSQPCFCQAPWGGIKRSGFGRELGEWGLENYLSVKQVTR 365
Query: 508 YISDEPWGWYQSPSKL* 558
YIS+EPWGWYQ+PSKL*
Sbjct: 366 YISEEPWGWYQAPSKL* 416
>gb|DT512995.1|DT512995 WS02420.B21_N08 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02420_N08 3', mRNA sequence
Length = 566
Score = 284 bits (614), Expect = 5e-076
Identities = 108/137 (78%), Positives = 121/137 (88%)
Frame = +1 / -3
Query: 148 HLEKGFFIEPTIITDITTSMEIWREEVFGPVLCVKEFSTEDEAIELANDTQYGLAGAVIS 327
HL KGFF+EPTII D+TTSM+IWREEVFGPVLCVK FSTEDEAI+LANDT YGL AVIS
Sbjct: 561 HLNKGFFVEPTIIIDVTTSMQIWREEVFGPVLCVKTFSTEDEAIDLANDTHYGLGAAVIS 382
Query: 328 GDRERCQRLSEEIDAGCIWVNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLSVKQVTE 507
D ERC R+++ AG +W+NCSQPCFCQAPWGG KRSGFGRELGE G++NYLSVKQVT
Sbjct: 381 NDPERCDRVAKAFRAGIVWINCSQPCFCQAPWGGIKRSGFGRELGEWGLENYLSVKQVTR 202
Query: 508 YISDEPWGWYQSPSKL* 558
YIS+EPWGWYQ+PSKL*
Sbjct: 201 YISEEPWGWYQAPSKL* 151
>gb|CK088015.1|CK088015 A031P29.3pR Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA clone A031P29 3', mRNA sequence
Length = 611
Score = 281 bits (608), Expect = 3e-075
Identities = 107/136 (78%), Positives = 121/136 (88%)
Frame = +1 / -2
Query: 151 LEKGFFIEPTIITDITTSMEIWREEVFGPVLCVKEFSTEDEAIELANDTQYGLAGAVISG 330
L KGFF+EPTII D+TTSM+IWREEVFGPVLCVK FSTEDEAI+LANDT YGL AVIS
Sbjct: 610 LNKGFFVEPTIIIDVTTSMQIWREEVFGPVLCVKTFSTEDEAIDLANDTHYGLGAAVISN 431
Query: 331 DRERCQRLSEEIDAGCIWVNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLSVKQVTEY 510
D ERC R+++ AG +W+NCSQPCFCQAPWGG KRSGFGRELGE G++NYLSVKQVT+Y
Sbjct: 430 DPERCDRVAKAFRAGIVWINCSQPCFCQAPWGGIKRSGFGRELGEWGLENYLSVKQVTQY 251
Query: 511 ISDEPWGWYQSPSKL* 558
IS+EPWGWYQ+PSKL*
Sbjct: 250 ISEEPWGWYQAPSKL* 203
Score = 53.8 bits (111), Expect(3) = 7e-022
Identities = 23/55 (41%), Positives = 35/55 (63%)
Frame = -1 / +2
Query: 318 STSQTILCIVGKFDGFIFSAKFFNAQDWTKDFLPPDFH*CGDISNNSWFNKEPLL 154
S+S I+ ++ + +GFIFS K FN + K+F PD H I+++ WFNKE L+
Sbjct: 443 SSS*AIMGVICQINGFIFSTKCFNT*NRPKNFFSPDLHGGRYINDDGWFNKESLV 607
Score = 48.3 bits (99), Expect(3) = 7e-022
Identities = 17/23 (73%), Positives = 18/23 (78%)
Frame = -2 / +3
Query: 557 YSLEGDWYHPHGSSEMYSVTCLT 489
YS EG WY PHGSSE+Y VTC T
Sbjct: 204 YSFEGAWYQPHGSSEIY*VTCFT 272
Score = 39.1 bits (79), Expect(3) = 7e-022
Identities = 19/35 (54%), Positives = 23/35 (65%)
Frame = -1 / +2
Query: 483 VVINAPFSKLTSKSTALVPAPGSLAEAGLRAVYPD 379
VV +PFS T K+TAL +P SL EA L A+ PD
Sbjct: 278 VVFKSPFS*FTPKTTALNASPWSLTEAWL*AIDPD 382
>gb|CV255453.1|CV255453 WS02414.B21_A22 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02414_A22 3', mRNA sequence
Length = 606
Score = 280 bits (606), Expect = 6e-075
Identities = 107/136 (78%), Positives = 120/136 (88%)
Frame = +1 / -1
Query: 151 LEKGFFIEPTIITDITTSMEIWREEVFGPVLCVKEFSTEDEAIELANDTQYGLAGAVISG 330
L KGFF+EPTII D+TTSM+IWREEVFGPVLCVK FSTEDEAI+LANDT YGL AVIS
Sbjct: 603 LNKGFFVEPTIIIDVTTSMQIWREEVFGPVLCVKTFSTEDEAIDLANDTHYGLGAAVISN 424
Query: 331 DRERCQRLSEEIDAGCIWVNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLSVKQVTEY 510
D ERC R+++ AG +W+NCSQPCFCQAPWGG KRSGFGRELGE G++NYLSVKQVT Y
Sbjct: 423 DPERCDRVAKAFRAGIVWINCSQPCFCQAPWGGIKRSGFGRELGEWGLENYLSVKQVTRY 244
Query: 511 ISDEPWGWYQSPSKL* 558
IS+EPWGWYQ+PSKL*
Sbjct: 243 ISEEPWGWYQAPSKL* 196
>gb|CN522880.1|CN522880 GQ0122.B3_M23 GQ012 Populus trichocarpa x Populus deltoides cDNA
clone GQ0122_M23 5', mRNA sequence
Length = 562
Score = 272 bits (589), Expect = 1e-072
Identities = 108/146 (73%), Positives = 120/146 (82%)
Frame = +1 / -1
Query: 121 ILTGGVRPAHLEKGFFIEPTIITDITTSMEIWREEVFGPVLCVKEFSTEDEAIELANDTQ 300
IL+GG RP HL KG + II D+TTSM REEVFGPVLCVK FSTEDEAI+LANDT
Sbjct: 562 ILSGGDRPKHLNKGXXVXXXIIIDVTTSMXXXREEVFGPVLCVKTFSTEDEAIDLANDTH 383
Query: 301 YGLAGAVISGDRERCQRLSEEIDAGCIWVNCSQPCFCQAPWGGNKRSGFGRELGEGGIDN 480
YGL AVIS D ERC R+++ AG +WVNCSQPCFCQAPWGG KRSGFGRELGE G++N
Sbjct: 382 YGLGAAVISNDPERCDRVAKAFRAGIVWVNCSQPCFCQAPWGGIKRSGFGRELGEWGLEN 203
Query: 481 YLSVKQVTEYISDEPWGWYQSPSKL* 558
YLSVKQVT YIS+EPWGWYQ+PSKL*
Sbjct: 202 YLSVKQVTRYISEEPWGWYQAPSKL* 125
>gb|BU862883.1|BU862883 S021B03 Populus imbibed seed cDNA library Populus tremula cDNA 5
prime, mRNA sequence
Length = 422
Score = 272 bits (588), Expect = 2e-072
Identities = 104/140 (74%), Positives = 120/140 (85%)
Frame = +1 / +2
Query: 10 KVSDPLEEGCRLGPVVSEGQYEKIKKFISNAKSQGATILTGGVRPAHLEKGFFIEPTIIT 189
K+SDP EEGCRLGPVVS GQYEK+ +FI+ A+S+GATIL+GG RP H KGFF+EPTIIT
Sbjct: 2 KISDPFEEGCRLGPVVSGGQYEKVLEFIATARSEGATILSGGDRPKHFTKGFFVEPTIIT 181
Query: 190 DITTSMEIWREEVFGPVLCVKEFSTEDEAIELANDTQYGLAGAVISGDRERCQRLSEEID 369
D+TTSM+IWREEVFGPVLCVK FS+EDEAIELANDT YGL AVIS D ERC R+++
Sbjct: 182 DVTTSMQIWREEVFGPVLCVKTFSSEDEAIELANDTHYGLGAAVISNDLERCDRVTKAFR 361
Query: 370 AGCIWVNCSQPCFCQAPWGG 429
AG +W+NCSQ CFCQAPWGG
Sbjct: 362 AGIVWINCSQACFCQAPWGG 421
Score = 120 bits (257), Expect = 8e-027
Identities = 61/137 (44%), Positives = 68/137 (49%)
Frame = -2 / -3
Query: 419 GAWQKQGCEQFTQMHPASISSDNLWQRSRSPEITAPAKPYCXXXXXXXXXXXXXXXLTHR 240
GA QK CEQ PA + SRS +ITA KP LTHR
Sbjct: 411 GA*QKHACEQLIHTIPARKALVTRSHLSRSFDITAAPKP*WVSFANSMASSSELNVLTHR 232
Query: 239 TGPKTXXXXXXXXXXXXXXXXXXIKNPFSRCAGLTPPVRIVAPWLLAFDMNFLIFSYCPS 60
TGPKT KNP +C G +PP+++VAP LLA MN FSYCP
Sbjct: 231 TGPKTSSLQICMEVVTSVMMVGSTKNPLVKCLGRSPPLKMVAPSLLAVAMNSNTFSYCPP 52
Query: 59 LTTGPSLQPSSSGSETL 9
LTTGPSLQPSS GSE L
Sbjct: 51 LTTGPSLQPSSKGSEIL 1
>gb|BU865374.1|BU865374 S052H04 Populus imbibed seed cDNA library Populus tremula cDNA 5
prime, mRNA sequence
Length = 433
Score = 272 bits (588), Expect = 2e-072
Identities = 107/144 (74%), Positives = 122/144 (84%)
Frame = +1 / +2
Query: 40 RLGPVVSEGQYEKIKKFISNAKSQGATILTGGVRPAHLEKGFFIEPTIITDITTSMEIWR 219
RLGPVVS QYEK+ +FI+ A+S+GATIL+GG RP H KGFF+EPTIITD+TTSM+IWR
Sbjct: 2 RLGPVVSGRQYEKVLEFIATARSEGATILSGGDRPKHFTKGFFVEPTIITDVTTSMQIWR 181
Query: 220 EEVFGPVLCVKEFSTEDEAIELANDTQYGLAGAVISGDRERCQRLSEEIDAGCIWVNCSQ 399
EEVFGPVLCVK FS+EDEAIELANDT YGL AVIS D ERC R+++ AG +W+NCSQ
Sbjct: 182 EEVFGPVLCVKTFSSEDEAIELANDTHYGLGAAVISNDLERCDRVTKAFRAGIVWINCSQ 361
Query: 400 PCFCQAPWGGNKRSGFGRELGEGG 471
PCFCQAPWGG KRSGFGREL E G
Sbjct: 362 PCFCQAPWGGIKRSGFGRELREWG 433
Score = 101 bits (215), Expect = 5e-021
Identities = 53/127 (41%), Positives = 60/127 (47%)
Frame = -2 / -2
Query: 419 GAWQKQGCEQFTQMHPASISSDNLWQRSRSPEITAPAKPYCXXXXXXXXXXXXXXXLTHR 240
GA QK GCEQ PA + SRS +ITA KP LTHR
Sbjct: 381 GA*QKHGCEQLIHTIPARKALVTRSHLSRSFDITAAPKP*WVSFANSMASSSELNVLTHR 202
Query: 239 TGPKTXXXXXXXXXXXXXXXXXXIKNPFSRCAGLTPPVRIVAPWLLAFDMNFLIFSYCPS 60
TGPKT KNP +C G +PP+++VAP LLA MN FSYC
Sbjct: 201 TGPKTSSLQICMEVVTSVMMVGSTKNPLVKCLGRSPPLKMVAPSLLAVAMNSNTFSYCLP 22
Query: 59 LTTGPSL 39
LTTGPSL
Sbjct: 21 LTTGPSL 1
>gb|BU894809.1|BU894809 X015C11 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 652
Score = 261 bits (565), Expect = 3e-069
Identities = 100/125 (80%), Positives = 112/125 (89%)
Frame = +1 / +3
Query: 184 ITDITTSMEIWREEVFGPVLCVKEFSTEDEAIELANDTQYGLAGAVISGDRERCQRLSEE 363
ITD+TTSM+IWREEVFGPVLCVK FS+EDEAIELANDT YGL AVIS D ERC R+++
Sbjct: 3 ITDVTTSMQIWREEVFGPVLCVKTFSSEDEAIELANDTHYGLRAAVISNDLERCDRVTKA 182
Query: 364 IDAGCIWVNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLSVKQVTEYISDEPWGWYQS 543
AG +W+NCSQPCFCQAPWGG KRSGFGRELGE G++NYLSVKQVT+YISDEPWGWYQS
Sbjct: 183 FRAGIVWINCSQPCFCQAPWGGIKRSGFGRELGEWGLENYLSVKQVTQYISDEPWGWYQS 362
Query: 544 PSKL* 558
P+KL*
Sbjct: 363 PAKL* 377
>gb|CX657151.1|CX657151 PO02030H12 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO02030H12 5', mRNA sequence
Length = 352
Score = 221 bits (476), Expect = 5e-057
Identities = 88/117 (75%), Positives = 100/117 (85%)
Frame = +1 / +2
Query: 4 RVKVSDPLEEGCRLGPVVSEGQYEKIKKFISNAKSQGATILTGGVRPAHLEKGFFIEPTI 183
R+K+SDP EEGCRLGPVVS GQYEK+ +FI+ A S+GATIL+GG RP H KGFF+EPTI
Sbjct: 2 RIKISDPFEEGCRLGPVVSGGQYEKVLEFIATAXSEGATILSGGNRPKHFTKGFFVEPTI 181
Query: 184 ITDITTSMEIWREEVFGPVLCVKEFSTEDEAIELANDTQYGLAGAVISGDRERCQRL 354
ITD+TTSM+IWREEV GPVLCVK FS+EDEAIELANDT YGL AVIS D ERC R+
Sbjct: 182 ITDVTTSMQIWREEVLGPVLCVKTFSSEDEAIELANDTHYGLGAAVISNDLERCDRV 352
Score = 105 bits (224), Expect = 3e-022
Identities = 51/110 (46%), Positives = 56/110 (50%)
Frame = -2 / -2
Query: 338 SRSPEITAPAKPYCXXXXXXXXXXXXXXXLTHRTGPKTXXXXXXXXXXXXXXXXXXIKNP 159
SRS +ITA KP LTHRTGPKT KNP
Sbjct: 336 SRSFDITAAPKP*WVSFANSMASSSELNVLTHRTGPKTSSLQICMEVVTSVMMVGSTKNP 157
Query: 158 FSRCAGLTPPVRIVAPWLLAFDMNFLIFSYCPSLTTGPSLQPSSSGSETL 9
+C G PP+++VAP L A MN FSYCP LTTGPSLQPSS GSE L
Sbjct: 156 LVKCLGRLPPLKMVAPSLXAVAMNSNTFSYCPPLTTGPSLQPSSKGSEIL 7
>gb|CK087727.1|CK087727 A019P11.3pR Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA clone A019P11 3', mRNA sequence
Length = 608
Score = 201 bits (433), Expect = 4e-051
Identities = 76/98 (77%), Positives = 86/98 (87%)
Frame = +1 / -1
Query: 265 EDEAIELANDTQYGLAGAVISGDRERCQRLSEEIDAGCIWVNCSQPCFCQAPWGGNKRSG 444
EDEAIELAN+T YGL AVIS D ERC R+++ AG +W+NCSQPCFCQAPWGG KRSG
Sbjct: 599 EDEAIELANNTHYGLGAAVISNDLERCDRVTKAFRAGIVWINCSQPCFCQAPWGGIKRSG 420
Query: 445 FGRELGEGGIDNYLSVKQVTEYISDEPWGWYQSPSKL* 558
FGRELGE G++NYLSVKQVT+YISDEPWGWYQSP+KL*
Sbjct: 419 FGRELGEWGLENYLSVKQVTQYISDEPWGWYQSPAKL* 306
>gb|AI163062.1|AI163062 A031p29u Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA 5', mRNA sequence
Length = 404
Score = 145 bits (312), Expect(3) = 4e-042
Identities = 56/77 (72%), Positives = 68/77 (88%)
Frame = +1 / +3
Query: 4 RVKVSDPLEEGCRLGPVVSEGQYEKIKKFISNAKSQGATILTGGVRPAHLEKGFFIEPTI 183
++K+SDP +EGCRLGP+VS QY+KI KFI+ AKS+GATIL+GG RP HL KGFF+EPTI
Sbjct: 69 KIKISDPFKEGCRLGPLVSGEQYDKILKFIATAKSEGATILSGGDRPEHLNKGFFVEPTI 248
Query: 184 ITDITTSMEIWREEVFG 234
I D+TTSM+IWREEVFG
Sbjct: 249 IIDVTTSMQIWREEVFG 299
Score = 40.0 bits (81), Expect(3) = 4e-042
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = +1 / +2
Query: 229 FGPVLCVKEFSTEDEAIEL 285
F PVLCVK FSTEDEAI+L
Sbjct: 293 FWPVLCVKTFSTEDEAIDL 349
Score = 24.0 bits (46), Expect(3) = 4e-042
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +1 / +1
Query: 286 ANDTQYGLAGAV 321
ANDT YGL AV
Sbjct: 349 ANDTHYGLGAAV 384
>gb|CX658497.1|CX658497 PO01035G05 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO01035G05 5', mRNA sequence
Length = 504
Score = 162 bits (348), Expect = 2e-039
Identities = 58/76 (76%), Positives = 68/76 (89%)
Frame = +1 / +3
Query: 331 DRERCQRLSEEIDAGCIWVNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLSVKQVTEY 510
D ERC R+++ AG +W+NCSQPCFCQAPWGG KRSGFGRELGE G++NYL+VKQVT+Y
Sbjct: 6 DLERCDRVTKAFRAGIVWINCSQPCFCQAPWGGIKRSGFGRELGEWGLENYLNVKQVTQY 185
Query: 511 ISDEPWGWYQSPSKL* 558
ISDEPWGWYQSP+KL*
Sbjct: 186 ISDEPWGWYQSPAKL* 233
>gb|CV265001.1|CV265001 WS02026.B21_B01 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02026_B01 3', mRNA sequence
Length = 907
Score = 132 bits (282), Expect(2) = 3e-039
Identities = 54/125 (43%), Positives = 77/125 (61%)
Frame = +1 / -1
Query: 154 EKGFFIEPTIITDITTSMEIWREEVFGPVLCVKEFSTEDEAIELANDTQYGLAGAVISGD 333
+KG+FIEPT+ TD+ M I +E+FGPV+ + +F T DEAI+ AN+T+YGLA +++ +
Sbjct: 637 KKGYFIEPTVFTDVKEDMMIATDEIFGPVMSLMKFKTIDEAIKKANNTKYGLAAGIVTKN 458
Query: 334 RERCQRLSEEIDAGCIWVNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLSVKQVTEYI 513
+ +S I AG IW+NC +GG K SGFGR LG + +L VK V I
Sbjct: 457 LDVANTVSRSIRAGTIWINCYFAFDNDCSYGGYKMSGFGRHLGMEALHKFLQVKSVVTPI 278
Query: 514 SDEPW 528
+ PW
Sbjct: 277 YNSPW 263
Score = 50.1 bits (103), Expect(2) = 3e-039
Identities = 19/41 (46%), Positives = 28/41 (68%)
Frame = +1 / -1
Query: 13 VSDPLEEGCRLGPVVSEGQYEKIKKFISNAKSQGATILTGG 135
V DP + RLGP V + Q++KI +I + K +GA++LTGG
Sbjct: 772 VGDPFDPRSRLGPQVDKQQFDKILSYIEHGKREGASLLTGG 650
>gb|DT523819.1|DT523819 WS02040.B21_L16 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02040_L16 3', mRNA sequence
Length = 843
Score = 132 bits (282), Expect(2) = 3e-039
Identities = 54/125 (43%), Positives = 77/125 (61%)
Frame = +1 / -1
Query: 154 EKGFFIEPTIITDITTSMEIWREEVFGPVLCVKEFSTEDEAIELANDTQYGLAGAVISGD 333
+KG+FIEPT+ TD+ M I +E+FGPV+ + +F T DEAI+ AN+T+YGLA +++ +
Sbjct: 555 KKGYFIEPTVFTDVKEDMMIATDEIFGPVMSLMKFKTIDEAIKKANNTKYGLAAGIVTKN 376
Query: 334 RERCQRLSEEIDAGCIWVNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLSVKQVTEYI 513
+ +S I AG IW+NC +GG K SGFGR LG + +L VK V I
Sbjct: 375 LDVANTVSRSIRAGTIWINCYFAFDNDCSYGGYKMSGFGRHLGMEALHKFLQVKSVVTPI 196
Query: 514 SDEPW 528
+ PW
Sbjct: 195 YNSPW 181
Score = 50.1 bits (103), Expect(2) = 3e-039
Identities = 19/41 (46%), Positives = 28/41 (68%)
Frame = +1 / -1
Query: 13 VSDPLEEGCRLGPVVSEGQYEKIKKFISNAKSQGATILTGG 135
V DP + RLGP V + Q++KI +I + K +GA++LTGG
Sbjct: 690 VGDPFDPRSRLGPQVDKQQFDKILSYIEHGKREGASLLTGG 568
>gb|CV276058.1|CV276058 WS0178.B21.1_H22 PTxD-NR-A-8 Populus trichocarpa x Populus
deltoides cDNA clone WS0178_H22 3', mRNA sequence
Length = 831
Score = 131 bits (281), Expect(2) = 3e-039
Identities = 54/125 (43%), Positives = 77/125 (61%)
Frame = +1 / -2
Query: 154 EKGFFIEPTIITDITTSMEIWREEVFGPVLCVKEFSTEDEAIELANDTQYGLAGAVISGD 333
+KG+FIEPT+ TD+ M I +E+FGPV+ + +F T DEAI+ AN+T+YGLA +++ +
Sbjct: 662 KKGYFIEPTVFTDVKEDMMIATDEIFGPVMSLMKFKTIDEAIKKANNTKYGLAAGIVTKN 483
Query: 334 RERCQRLSEEIDAGCIWVNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLSVKQVTEYI 513
+ +S I AG IW+NC +GG K SGFGR LG + +L VK V I
Sbjct: 482 LDVANTVSRSIRAGTIWINCYFAFDNDCSYGGYKMSGFGRHLGIEALHKFLQVKSVVTPI 303
Query: 514 SDEPW 528
+ PW
Sbjct: 302 YNSPW 288
Score = 50.1 bits (103), Expect(2) = 3e-039
Identities = 19/41 (46%), Positives = 28/41 (68%)
Frame = +1 / -2
Query: 13 VSDPLEEGCRLGPVVSEGQYEKIKKFISNAKSQGATILTGG 135
V DP + RLGP V + Q++KI +I + K +GA++LTGG
Sbjct: 797 VGDPFDPRSRLGPQVDKQQFDKILSYIEHGKREGASLLTGG 675
>gb|CX656688.1|CX656688 PO02022C11 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO02022C11 5', mRNA sequence
Length = 366
Score = 160 bits (345), Expect = 6e-039
Identities = 59/78 (75%), Positives = 68/78 (87%)
Frame = +1 / +3
Query: 325 SGDRERCQRLSEEIDAGCIWVNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLSVKQVT 504
S D ERC R+++ AG +W+NCSQPCFCQAPWGG KRSG GRELGE G++NYLSVKQVT
Sbjct: 3 SNDLERCDRVTKASRAGIVWINCSQPCFCQAPWGGIKRSGSGRELGEWGLENYLSVKQVT 182
Query: 505 EYISDEPWGWYQSPSKL* 558
+YISDEPWGWYQSP+KL*
Sbjct: 183 QYISDEPWGWYQSPAKL* 236
>gb|BU885984.1|BU885984 R038H11 Populus root cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 351
Score = 143 bits (306), Expect(2) = 2e-037
Identities = 51/61 (83%), Positives = 58/61 (95%)
Frame = +1 / +1
Query: 376 CIWVNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLSVKQVTEYISDEPWGWYQSPSKL 555
C ++NCSQPCFCQAPWGG KRSGFGRELGE G++NYLSVKQVT+YIS+EPWGWYQ+PSKL
Sbjct: 40 CCYINCSQPCFCQAPWGGIKRSGFGRELGEWGLENYLSVKQVTQYISEEPWGWYQAPSKL 219
Query: 556 * 558
*
Sbjct: 220 * 222
Score = 32.2 bits (64), Expect(2) = 2e-037
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = +1 / +2
Query: 277 IELANDTQYGLAGAVIS 327
I+LANDT YGL AVIS
Sbjct: 2 IDLANDTHYGLGAAVIS 52
>gb|BU884373.1|BU884373 R009G07 Populus root cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 388
Score = 146 bits (314), Expect = 1e-034
Identities = 52/63 (82%), Positives = 59/63 (93%)
Frame = +1 / +1
Query: 370 AGCIWVNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLSVKQVTEYISDEPWGWYQSPS 549
AG +W+NC QPCFCQAPWGG KRSGFGRELGE G++NYLSVKQVT+YIS+EPWGWYQ+PS
Sbjct: 13 AGIVWINCPQPCFCQAPWGGIKRSGFGRELGEWGLENYLSVKQVTQYISEEPWGWYQAPS 192
Query: 550 KL* 558
KL*
Sbjct: 193 KL* 201
>gb|CV258894.1|CV258894 WS0201.B21_M19 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS0201_M19 3', mRNA sequence
Length = 910
Score = 118 bits (253), Expect(2) = 7e-033
Identities = 48/124 (38%), Positives = 71/124 (57%)
Frame = +1 / -1
Query: 157 KGFFIEPTIITDITTSMEIWREEVFGPVLCVKEFSTEDEAIELANDTQYGLAGAVISGDR 336
KG+FI+PT+ +++ M I ++E+FGPV + +F DE I+ AN T+YGLA + + +
Sbjct: 523 KGYFIQPTVFSNVQDDMLIAKDEIFGPVQSILKFKNIDEVIQRANTTRYGLAAGIFTKNV 344
Query: 337 ERCQRLSEEIDAGCIWVNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLSVKQVTEYIS 516
+ LS + G +WVNC P+GG K SG GRE G + NYL VK V +
Sbjct: 343 DTANTLSRALRVGSVWVNCFDVFDAAIPFGGYKMSGIGREKGIYSLHNYLQVKAVVTPLK 164
Query: 517 DEPW 528
+ W
Sbjct: 163 NPAW 152
Score = 41.8 bits (85), Expect(2) = 7e-033
Identities = 16/43 (37%), Positives = 24/43 (55%)
Frame = +1 / -1
Query: 13 VSDPLEEGCRLGPVVSEGQYEKIKKFISNAKSQGATILTGGVR 141
V DP ++G GP + Q+EKI ++I + AT+ GG R
Sbjct: 661 VGDPFKKGVEQGPQIDSEQFEKILRYIKSGAESNATLECGGQR 533
>gb|CX182528.1|CX182528 H02_45-85_16.ab1 leaf inoculated with Marssonia pathogen of Populus
euramericana Populus x canadensis cDNA, mRNA sequence
Length = 478
Score = 140 bits (300), Expect = 9e-033
Identities = 51/58 (87%), Positives = 56/58 (96%)
Frame = +1 / +1
Query: 385 VNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLSVKQVTEYISDEPWGWYQSPSKL* 558
+NCSQPCFCQAPWGG KRSGFGRELGE G++NYLSVKQVT+YISDEPWGWYQSP+KL*
Sbjct: 31 INCSQPCFCQAPWGGIKRSGFGRELGEWGLENYLSVKQVTQYISDEPWGWYQSPAKL* 204
>gb|CX656419.1|CX656419 PO01001D08 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO01001D08 5', mRNA sequence
Length = 664
Score = 118 bits (252), Expect(2) = 1e-032
Identities = 47/124 (37%), Positives = 71/124 (57%)
Frame = +1 / -3
Query: 157 KGFFIEPTIITDITTSMEIWREEVFGPVLCVKEFSTEDEAIELANDTQYGLAGAVISGDR 336
KG+FI+PT+ +++ M I ++E+FGPV + +F DE I+ AN T+YGLA + + +
Sbjct: 518 KGYFIQPTVFSNVQDDMLIAKDEIFGPVQSILKFKNIDEVIQRANTTRYGLAAGIFTKNV 339
Query: 337 ERCQRLSEEIDAGCIWVNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLSVKQVTEYIS 516
+ LS + G +W+NC P+GG K SG GRE G + NYL VK V +
Sbjct: 338 DTANTLSRALRVGSVWINCFDVFDAAIPFGGYKMSGIGREKGIYSLHNYLQVKAVVTPLK 159
Query: 517 DEPW 528
+ W
Sbjct: 158 NPAW 147
Score = 41.4 bits (84), Expect(2) = 1e-032
Identities = 16/43 (37%), Positives = 24/43 (55%)
Frame = +1 / -3
Query: 13 VSDPLEEGCRLGPVVSEGQYEKIKKFISNAKSQGATILTGGVR 141
V DP ++G GP + Q+EKI ++I + AT+ GG R
Sbjct: 656 VGDPFKKGVEQGPQIDSEQFEKILRYIKSGVESNATLECGGQR 528
>gb|CA934253.1|CA934253 MTU3TS.P5.B08 Aspen stem cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 537
Score = 116 bits (249), Expect(2) = 1e-032
Identities = 46/123 (37%), Positives = 70/123 (56%)
Frame = +1 / +2
Query: 160 GFFIEPTIITDITTSMEIWREEVFGPVLCVKEFSTEDEAIELANDTQYGLAGAVISGDRE 339
G++I+PT+ +D+ M I +EE+FGPV + +F DE I+ +N T+YGLA + + + +
Sbjct: 143 GYYIQPTVFSDVQDDMLIAKEEIFGPVQSIFKFKDLDEVIQRSNSTRYGLAAGIFTHNLD 322
Query: 340 RCQRLSEEIDAGCIWVNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLSVKQVTEYISD 519
LS + G +W+NC P+GG K SG GRE G + NYL VK V + +
Sbjct: 323 TANTLSRALKVGTVWINCYDVFDAAIPFGGYKMSGNGREKGIYSLSNYLQVKAVVTSLKN 502
Query: 520 EPW 528
W
Sbjct: 503 PAW 511
Score = 42.8 bits (87), Expect(2) = 1e-032
Identities = 18/43 (41%), Positives = 22/43 (51%)
Frame = +1 / +2
Query: 13 VSDPLEEGCRLGPVVSEGQYEKIKKFISNAKSQGATILTGGVR 141
V DP EG GP V Q+EKI + I + GA + GG R
Sbjct: 2 VGDPFREGIEQGPQVDSDQFEKILRIIRSGVESGANLQAGGDR 130
>gb|CA933918.1|CA933918 MTU3TS.P14.D04 Aspen stem cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 537
Score = 116 bits (248), Expect(2) = 2e-032
Identities = 46/123 (37%), Positives = 70/123 (56%)
Frame = +1 / -2
Query: 160 GFFIEPTIITDITTSMEIWREEVFGPVLCVKEFSTEDEAIELANDTQYGLAGAVISGDRE 339
G++I+PT+ +D+ M I +EE+FGPV + +F DE I+ +N T+YGLA + + + +
Sbjct: 395 GYYIQPTVFSDVQDDMLIAKEEIFGPVQSIFKFKDLDEVIQRSNGTRYGLAAGIFTHNLD 216
Query: 340 RCQRLSEEIDAGCIWVNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLSVKQVTEYISD 519
LS + G +W+NC P+GG K SG GRE G + NYL VK V + +
Sbjct: 215 TANTLSRALKVGTVWINCYDVFDAAIPFGGYKMSGNGREKGIYSLSNYLQVKAVVTSLKN 36
Query: 520 EPW 528
W
Sbjct: 35 PAW 27
Score = 42.8 bits (87), Expect(2) = 2e-032
Identities = 18/43 (41%), Positives = 22/43 (51%)
Frame = +1 / -2
Query: 13 VSDPLEEGCRLGPVVSEGQYEKIKKFISNAKSQGATILTGGVR 141
V DP EG GP V Q+EKI + I + GA + GG R
Sbjct: 536 VGDPFREGIEQGPQVDSDQFEKILRIIRSGVESGANLQAGGDR 408
>gb|DN488090.1|DN488090 R032A09.3pR Populus root cDNA library Populus tremula x Populus
tremuloides cDNA clone V017A09 3', mRNA sequence
Length = 713
Score = 117 bits (250), Expect(2) = 3e-032
Identities = 46/124 (37%), Positives = 71/124 (57%)
Frame = +1 / -3
Query: 157 KGFFIEPTIITDITTSMEIWREEVFGPVLCVKEFSTEDEAIELANDTQYGLAGAVISGDR 336
KG+FI+PT+ +++ M I ++E+FGPV + +F DE I +N T+YGLA + + +
Sbjct: 486 KGYFIQPTVFSNVEDDMLIAQDEIFGPVQSILKFKNVDEVIRRSNSTRYGLAAGIFTQNV 307
Query: 337 ERCQRLSEEIDAGCIWVNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLSVKQVTEYIS 516
+ LS + G +W+NC P+GG K SG GRE G ++NYL VK V +
Sbjct: 306 DTANTLSRALRVGTVWINCFDVFDAAIPFGGYKMSGIGREKGIYSLNNYLQVKAVVTPLK 127
Query: 517 DEPW 528
+ W
Sbjct: 126 NPAW 115
Score = 40.9 bits (83), Expect(2) = 3e-032
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = +1 / -3
Query: 13 VSDPLEEGCRLGPVVSEGQYEKIKKFISNAKSQGATILTGGVR 141
V DP ++G GP + Q+EK+ ++I + AT+ GG R
Sbjct: 624 VGDPFKKGVEQGPQIDSDQFEKVLRYIRSGVESNATLECGGQR 496
>gb|CA927044.1|CA927044 MTU6CR.P4.C03 Aspen root cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 537
Score = 114 bits (244), Expect(2) = 6e-032
Identities = 45/123 (36%), Positives = 70/123 (56%)
Frame = +1 / +2
Query: 160 GFFIEPTIITDITTSMEIWREEVFGPVLCVKEFSTEDEAIELANDTQYGLAGAVISGDRE 339
G++I+PT+ +D+ M I +EE+FGPV + +F DE I+ ++ T+YGLA + + + +
Sbjct: 143 GYYIQPTVFSDVQDDMLIAKEEIFGPVQSIFKFKDLDEVIQRSDSTRYGLAAGIFTHNLD 322
Query: 340 RCQRLSEEIDAGCIWVNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLSVKQVTEYISD 519
LS + G +W+NC P+GG K SG GRE G + NYL VK V + +
Sbjct: 323 TANTLSRALKVGTVWINCYDVFDATIPFGGYKMSGNGREKGIYSLSNYLQVKAVVTSLKN 502
Query: 520 EPW 528
W
Sbjct: 503 PAW 511
Score = 42.8 bits (87), Expect(2) = 6e-032
Identities = 18/43 (41%), Positives = 22/43 (51%)
Frame = +1 / +2
Query: 13 VSDPLEEGCRLGPVVSEGQYEKIKKFISNAKSQGATILTGGVR 141
V DP EG GP V Q+EKI + I + GA + GG R
Sbjct: 2 VGDPFREGIEQGPQVDSDQFEKILRIIRSGVESGANLKAGGDR 130
>gb|AJ776291.1|AJ776291 AJ776291 Populus euphratica root 3-6 months Populus euphratica cDNA
clone P0000400011D07F1, mRNA sequence
Length = 604
Score = 130 bits (279), Expect = 7e-030
Identities = 50/68 (73%), Positives = 61/68 (89%)
Frame = +1 / +1
Query: 7 VKVSDPLEEGCRLGPVVSEGQYEKIKKFISNAKSQGATILTGGVRPAHLEKGFFIEPTII 186
+K+SDP EEGCRLGPVVS GQYEK+ +FI+ A+S+GATIL+GG RP HL KGFF+EPTII
Sbjct: 400 IKISDPFEEGCRLGPVVSGGQYEKVLEFIATARSEGATILSGGDRPKHLTKGFFVEPTII 579
Query: 187 TDITTSME 210
TD+TTSM+
Sbjct: 580 TDVTTSMQ 603
>gb|CB240336.1|CB240336 PopSC00315 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PopSC00315, mRNA sequence
Length = 444
Score = 106 bits (227), Expect(2) = 9e-030
Identities = 43/98 (43%), Positives = 63/98 (64%)
Frame = +1 / +3
Query: 154 EKGFFIEPTIITDITTSMEIWREEVFGPVLCVKEFSTEDEAIELANDTQYGLAGAVISGD 333
+KG+FIEPT+ TD+ M I +E+FGPV+ + +F T DEAI+ AN+T+YGLA +++ +
Sbjct: 111 KKGYFIEPTVFTDVKEEMMIATDEIFGPVMSLMKFKTIDEAIKKANNTKYGLAAGIVTKN 290
Query: 334 RERCQRLSEEIDAGCIWVNCSQPCFCQAPWGGNKRSGF 447
+ +S I AG IW+NC +GG K SGF
Sbjct: 291 LDVANTVSRSIRAGTIWINCYFAFDQDCSYGGYKMSGF 404
Score = 43.2 bits (88), Expect(2) = 9e-030
Identities = 16/32 (50%), Positives = 24/32 (75%)
Frame = +1 / +3
Query: 40 RLGPVVSEGQYEKIKKFISNAKSQGATILTGG 135
RLGP V + Q++KI +I + K +GA++LTGG
Sbjct: 3 RLGPQVDKQQFDKILSYIEHGKREGASLLTGG 98
>gb|DN497770.1|DN497770 R032A09.5pR Populus root cDNA library Populus tremula x Populus
tremuloides cDNA clone V017A09 5', mRNA sequence
Length = 705
Score = 112 bits (239), Expect(2) = 1e-029
Identities = 45/115 (39%), Positives = 68/115 (59%)
Frame = +1 / +2
Query: 157 KGFFIEPTIITDITTSMEIWREEVFGPVLCVKEFSTEDEAIELANDTQYGLAGAVISGDR 336
KG+FI+PT+ +++ M I ++E+FGPV + +F DE I +N T+YGLA + + +
Sbjct: 230 KGYFIQPTVCSNVEDDMLIAQDEIFGPVHSIWKFKNVDEVIRRSNSTRYGLAAGIFTQNV 409
Query: 337 ERCQRLSEEIDAGCIWVNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLSVKQV 501
+ LS + G +W+NC P+GG K SG GRE G ++NYL VK V
Sbjct: 410 DTANTLSRALRVGTVWINCFDVFDAAIPFGGYKMSGIGREKGIYSLNNYLQVKAV 574
Score = 37.3 bits (75), Expect(2) = 1e-029
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +1 / +2
Query: 13 VSDPLEEGCRLGPVVSEGQYEKIKKFISNAKSQGATILTGGVR 141
V DP ++G GP + ++EK+ +I + AT+ GG R
Sbjct: 92 VGDPFKKGVEQGPQIHSDRFEKVLMYIRSGVESNATLECGGQR 220
>gb|CA926209.1|CA926209 MTU6CR.P11.C07 Aspen root cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 550
Score = 128 bits (274), Expect = 4e-029
Identities = 53/125 (42%), Positives = 76/125 (60%)
Frame = +1 / +1
Query: 154 EKGFFIEPTIITDITTSMEIWREEVFGPVLCVKEFSTEDEAIELANDTQYGLAGAVISGD 333
+KG+FIEPTI TD+ M I +E+FGPV+ + +F T +EAI+ AN+T+YGLA +++ +
Sbjct: 58 KKGYFIEPTIFTDVKEDMMIATDEIFGPVMSLMKFKTIEEAIKKANNTKYGLAAGIVTKN 237
Query: 334 RERCQRLSEEIDAGCIWVNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLSVKQVTEYI 513
+ +S I AG IW+NC +GG K SGFGR LG + +L K V I
Sbjct: 238 LDVANTVSRSIRAGTIWINCYFAFDHDCSYGGYKMSGFGRHLGIEALHKFLQAKSVVTPI 417
Query: 514 SDEPW 528
+ PW
Sbjct: 418 YNSPW 432
>gb|AJ774952.1|AJ774952 AJ774952 Populus euphratica shoot 3-6 months Populus euphratica
cDNA clone P0000300026B08F1, mRNA sequence
Length = 566
Score = 125 bits (268), Expect = 2e-028
Identities = 52/121 (42%), Positives = 73/121 (60%)
Frame = +1 / +3
Query: 166 FIEPTIITDITTSMEIWREEVFGPVLCVKEFSTEDEAIELANDTQYGLAGAVISGDRERC 345
FIEPT+ TD+ M I +E+FGPV+ + +F T DEAI+ AN+T+YGLA +++ + +
Sbjct: 3 FIEPTVFTDVKADMMIATDEIFGPVMSLMKFKTIDEAIKKANNTKYGLAAGIVTKNLDVA 182
Query: 346 QRLSEEIDAGCIWVNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLSVKQVTEYISDEP 525
+S I AG IW+NC +GG K SGFGR LG + +L VK V I + P
Sbjct: 183 NTVSRSIRAGTIWINCYFAFDNDCSYGGYKMSGFGRHLGMEALHKFLQVKSVVTPIYNSP 362
Query: 526 W 528
W
Sbjct: 363 W 365
>gb|DT484480.1|DT484480 WS02525.B21_I14 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02525_I14 3', mRNA sequence
Length = 761
Score = 124 bits (265), Expect = 6e-028
Identities = 50/115 (43%), Positives = 74/115 (64%)
Frame = +1 / -3
Query: 160 GFFIEPTIITDITTSMEIWREEVFGPVLCVKEFSTEDEAIELANDTQYGLAGAVISGDRE 339
G+FIEPT+ +++T +M I +E+FGPV + +F T DE IE AN+T YGLA +++ + +
Sbjct: 498 GYFIEPTVFSNVTDNMSICTDEIFGPVQSILKFKTLDEIIERANNTSYGLAAGILTKNID 319
Query: 340 RCQRLSEEIDAGCIWVNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLSVKQVT 504
S ++AG +WVNC QAP+GG K+SG GRE GE ++ Y K V+
Sbjct: 318 NALVFSNAVEAGSVWVNCYLAITLQAPFGGYKQSGLGREGGEEVLELYQETKTVS 154
>gb|CV240954.1|CV240954 WS02510.B21_N03 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02510_N03 3', mRNA sequence
Length = 726
Score = 118 bits (253), Expect = 3e-026
Identities = 48/124 (38%), Positives = 71/124 (57%)
Frame = +1 / -1
Query: 157 KGFFIEPTIITDITTSMEIWREEVFGPVLCVKEFSTEDEAIELANDTQYGLAGAVISGDR 336
KG+FI+PT+ +++ M I ++E+FGPV + +F DE I+ AN T+YGLA + + +
Sbjct: 660 KGYFIQPTVFSNVQDDMLIAKDEIFGPVQSILKFKNIDEVIQRANTTRYGLAAGIFTKNV 481
Query: 337 ERCQRLSEEIDAGCIWVNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLSVKQVTEYIS 516
+ LS + G +WVNC P+GG K SG GRE G + NYL VK V +
Sbjct: 480 DTANTLSRALRVGSVWVNCFDVFDAAIPFGGYKMSGIGREKGIYSLHNYLQVKAVVTPLK 301
Query: 517 DEPW 528
+ W
Sbjct: 300 NPAW 289
>gb|CX173811.1|CX173811 C01_69-21_05.ab1 leaf inoculated with Marssonia pathogen of Populus
deltoides Populus deltoides cDNA, mRNA sequence
Length = 579
Score = 118 bits (253), Expect = 3e-026
Identities = 48/124 (38%), Positives = 71/124 (57%)
Frame = +1 / -1
Query: 157 KGFFIEPTIITDITTSMEIWREEVFGPVLCVKEFSTEDEAIELANDTQYGLAGAVISGDR 336
KG+FI+PT+ +++ M I ++E+FGPV + +F DE I+ AN T+YGLA + + +
Sbjct: 537 KGYFIQPTVFSNVQDDMLIAKDEIFGPVQSILKFKNIDEVIQRANTTRYGLAAGIFTKNV 358
Query: 337 ERCQRLSEEIDAGCIWVNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLSVKQVTEYIS 516
+ LS + G +WVNC P+GG K SG GRE G + NYL VK V +
Sbjct: 357 DTANTLSRALRVGSVWVNCFDVFDAAIPFGGYKMSGIGREKGIYSLHNYLQVKAVVTPLK 178
Query: 517 DEPW 528
+ W
Sbjct: 177 NPAW 166
>gb|CV228282.1|CV228282 WS0191.B21_J20 PT-DX-N-A-10 Populus trichocarpa cDNA clone
WS0191_J20 3', mRNA sequence
Length = 651
Score = 117 bits (251), Expect = 5e-026
Identities = 47/124 (37%), Positives = 71/124 (57%)
Frame = +1 / +3
Query: 157 KGFFIEPTIITDITTSMEIWREEVFGPVLCVKEFSTEDEAIELANDTQYGLAGAVISGDR 336
KG+FI+PT+ +++ M I ++E+FGPV + +F DE I +N T+YGLA + + +
Sbjct: 132 KGYFIQPTVFSNVEDDMLIAQDEIFGPVQSILKFKNVDEVIRRSNSTRYGLAAGIFTKNV 311
Query: 337 ERCQRLSEEIDAGCIWVNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLSVKQVTEYIS 516
+ LS + G +WVNC P+GG K SG GRE G ++NYL VK V +
Sbjct: 312 DTANTLSRALRVGTVWVNCFDVFDAAIPFGGYKMSGIGREKGIYSLNNYLQVKAVVTPLK 491
Query: 517 DEPW 528
+ W
Sbjct: 492 NPAW 503
>gb|CK089237.1|CK089237 B006P10.3pR Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA clone B006P10 3', mRNA sequence
Length = 655
Score = 116 bits (249), Expect = 1e-025
Identities = 46/123 (37%), Positives = 70/123 (56%)
Frame = +1 / -2
Query: 160 GFFIEPTIITDITTSMEIWREEVFGPVLCVKEFSTEDEAIELANDTQYGLAGAVISGDRE 339
G++I+PT+ +D+ M I +EE+FGPV + +F DE I+ +N T+YGLA + + + +
Sbjct: 561 GYYIQPTVFSDVQDDMLIAKEEIFGPVQSIFKFKDLDEVIQRSNSTRYGLAAGIFTHNLD 382
Query: 340 RCQRLSEEIDAGCIWVNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLSVKQVTEYISD 519
LS + G +W+NC P+GG K SG GRE G + NYL VK V + +
Sbjct: 381 TANTLSRALKVGTVWINCYDVFDAAIPFGGYKMSGNGREKGIYSLSNYLQVKAVVTSLKN 202
Query: 520 EPW 528
W
Sbjct: 201 PAW 193
>gb|DT485951.1|DT485951 WS02529.B21_J22 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02529_J22 3', mRNA sequence
Length = 797
Score = 114 bits (243), Expect = 7e-025
Identities = 45/123 (36%), Positives = 71/123 (57%)
Frame = +1 / -2
Query: 160 GFFIEPTIITDITTSMEIWREEVFGPVLCVKEFSTEDEAIELANDTQYGLAGAVISGDRE 339
G++I+PT+ +D+ M I +EE+FGPV + +F DE I+ +N+++YGLA + + + +
Sbjct: 685 GYYIQPTVFSDVQDDMLIAKEEIFGPV*SIFKFKDLDEVIQRSNNSRYGLAAGIFTHNLD 506
Query: 340 RCQRLSEEIDAGCIWVNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLSVKQVTEYISD 519
LS + G +W+NC P+GG K SG GRE G +NYL VK V + +
Sbjct: 505 TANTLSRALKVGTVWINCYDVFDAAIPFGGYKMSGNGREKGIYSFNNYLQVKAVVTSLKN 326
Query: 520 EPW 528
W
Sbjct: 325 PAW 317
>gb|CV272891.1|CV272891 WS0171.B21_A11 PTxD-NR-A-8 Populus trichocarpa x Populus deltoides
cDNA clone WS0171_A11 3', mRNA sequence
Length = 464
Score = 113 bits (242), Expect = 9e-025
Identities = 43/49 (87%), Positives = 47/49 (95%)
Frame = +1 / +3
Query: 412 QAPWGGNKRSGFGRELGEGGIDNYLSVKQVTEYISDEPWGWYQSPSKL* 558
QAPWGG KRSGFGRELGE G++NYLSVKQVT+YISDEPWGWYQSP+KL*
Sbjct: 3 QAPWGGIKRSGFGRELGEWGLENYLSVKQVTQYISDEPWGWYQSPAKL* 149
>gb|BP935724.1|BP935724 BP935724 full-length enriched poplar cDNA library Populus nigra
cDNA clone PnFL1-080_C06.r 3', mRNA sequence
Length = 652
Score = 113 bits (241), Expect = 1e-024
Identities = 44/123 (35%), Positives = 71/123 (57%)
Frame = +1 / -2
Query: 160 GFFIEPTIITDITTSMEIWREEVFGPVLCVKEFSTEDEAIELANDTQYGLAGAVISGDRE 339
G++I+PT+ +D+ M I +EE+FGPV + +F DE I+ +N+++YGLA + + + +
Sbjct: 582 GYYIQPTVFSDVQDDMLIAKEEIFGPVQSIFKFKDLDEVIQRSNNSRYGLAAGIFTHNLD 403
Query: 340 RCQRLSEEIDAGCIWVNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLSVKQVTEYISD 519
LS + G +W+NC P+GG K SG GRE G ++NY VK V + +
Sbjct: 402 TANTLSRALKVGTVWINCYDVFDAAIPFGGYKMSGNGREKGIYSLNNYSQVKAVVTSLKN 223
Query: 520 EPW 528
W
Sbjct: 222 PAW 214
>gb|CX658837.1|CX658837 PO01022H11 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO01022H11 5', mRNA sequence
Length = 509
Score = 111 bits (238), Expect = 3e-024
Identities = 45/121 (37%), Positives = 68/121 (56%)
Frame = +1 / +2
Query: 166 FIEPTIITDITTSMEIWREEVFGPVLCVKEFSTEDEAIELANDTQYGLAGAVISGDRERC 345
FI+PT+ +++ M I ++E+FGPV + +F DE I+ AN T+YGLA + + + +
Sbjct: 2 FIQPTVFSNVQDDMLIAKDEIFGPVQSILKFKNIDEVIQRANTTRYGLAAGIFTKNVDTA 181
Query: 346 QRLSEEIDAGCIWVNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLSVKQVTEYISDEP 525
LS + G +W+NC P+GG K SG GRE G + NYL VK V + +
Sbjct: 182 NTLSRALRVGSVWINCFDVFDAAIPFGGYKMSGIGREKGIYSLHNYLQVKAVVTPLKNPA 361
Query: 526 W 528
W
Sbjct: 362 W 364
>gb|CA926423.1|CA926423 MTU6CR.P14.H04 Aspen root cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 429
Score = 111 bits (236), Expect = 6e-024
Identities = 44/123 (35%), Positives = 69/123 (56%)
Frame = +1 / -2
Query: 160 GFFIEPTIITDITTSMEIWREEVFGPVLCVKEFSTEDEAIELANDTQYGLAGAVISGDRE 339
G++I+PT+ +D+ + I +E +FGPV + +F DE I+ +N T+YGLA + + + +
Sbjct: 395 GYYIQPTVFSDVQDDVLIAKE*IFGPVQSIFKFKDLDEVIQRSNSTRYGLAAGIFTHNLD 216
Query: 340 RCQRLSEEIDAGCIWVNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLSVKQVTEYISD 519
LS + G +W+NC P+GG K SG GRE G + NYL VK V + +
Sbjct: 215 TANTLSRALKVGTVWINCYDVFDAAIPFGGYKMSGNGREKGIYSLSNYLQVKAVVTSLKN 36
Query: 520 EPW 528
W
Sbjct: 35 PAW 27
>gb|DT479341.1|DT479341 WS02525.BR_I14 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02525_I14 5', mRNA sequence
Length = 805
Score = 109 bits (232), Expect = 2e-023
Identities = 42/95 (44%), Positives = 63/95 (66%)
Frame = +1 / +1
Query: 160 GFFIEPTIITDITTSMEIWREEVFGPVLCVKEFSTEDEAIELANDTQYGLAGAVISGDRE 339
G+FIEPT+ +++T +M I +E+FGPV + +F T DE IE AN+T YGLA +++ + +
Sbjct: 520 GYFIEPTVFSNVTDNMSICTDEIFGPVQSILKFKTLDEIIERANNTSYGLAAGILTKNID 699
Query: 340 RCQRLSEEIDAGCIWVNCSQPCFCQAPWGGNKRSG 444
S ++AG +WVNC QAP+GG K+SG
Sbjct: 700 NALVFSNAVEAGSVWVNCYLAITLQAPFGGYKQSG 804
>gb|CX172457.1|CX172457 C02_69-2_06.ab1 leaf inoculated with Marssonia pathogen of Populus
deltoides Populus deltoides cDNA, mRNA sequence
Length = 628
Score = 85.4 bits (180), Expect(2) = 8e-023
Identities = 31/79 (39%), Positives = 50/79 (63%)
Frame = +1 / +3
Query: 157 KGFFIEPTIITDITTSMEIWREEVFGPVLCVKEFSTEDEAIELANDTQYGLAGAVISGDR 336
KG+FI+PT+ +++ M I ++E+FGPV + +F DE I+ AN T+YGLA + + +
Sbjct: 369 KGYFIQPTVFSNVQDDMLIAKDEIFGPVQSILKFKNIDEVIQRANTTRYGLAAGIFTKNV 548
Query: 337 ERCQRLSEEIDAGCIWVNC 393
+ LS + G +WVNC
Sbjct: 549 DTANTLSRALRVGSVWVNC 605
Score = 41.4 bits (84), Expect(2) = 8e-023
Identities = 16/43 (37%), Positives = 24/43 (55%)
Frame = +1 / +3
Query: 13 VSDPLEEGCRLGPVVSEGQYEKIKKFISNAKSQGATILTGGVR 141
V DP ++G GP + Q+EKI ++I + AT+ GG R
Sbjct: 231 VGDPFKKGVEQGPQIDSEQFEKILRYIKSGVESNATLECGGQR 359
Database: Populus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:49 PM
Number of letters in database: 203,408,664
Number of sequences in database: 369,679
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 345,851,700
Number of Sequences: 369679
Number of extensions: 4740038
Number of successful extensions: 48287
Number of sequences better than 1.0e-020: 70
length of database: 67,802,888
effective HSP length: 51
effective length of database: 48,949,259
effective search space used: 8419272548
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)