TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3199064.2.1
(589 letters)
Database: Populus_nucl_with_EST.fasta
369,679 sequences; 203,408,664 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BU820365.1|BU820365 UA54DPD02 Populus tremula cambium cD... 186 1e-046
gb|BU879341.1|BU879341 V059A06 Populus flower cDNA library ... 185 2e-046
gb|CV234154.1|CV234154 WS01213.B21_N07 PT-GT-FL-A-3 Populus... 185 2e-046
gb|CF229780.1|CF229780 PtaXM0029F11F1111 Poplar cDNA librar... 178 2e-044
gb|BI130722.1|BI130722 G109P76Y Populus cambium cDNA librar... 178 3e-044
gb|BI130908.1|BI130908 G112P52Y Populus cambium cDNA librar... 178 3e-044
gb|BU831561.1|BU831561 T023A06 Populus apical shoot cDNA li... 178 3e-044
gb|BU895169.1|BU895169 X020C01 Populus wood cDNA library Po... 178 3e-044
gb|CF119737.1|CF119737 MTU10CS.P5.G01 Aspen stem cDNA Libra... 178 3e-044
gb|CF234458.1|CF234458 Ptajxojxo2H10H1016 Poplar cDNA libra... 178 3e-044
gb|CF234532.1|CF234532 PtaJXO0010H6A0701 Poplar cDNA librar... 178 3e-044
gb|CF234728.1|CF234728 PtaJXT0014D8D0808 Poplar cDNA librar... 178 3e-044
gb|CF236455.1|CF236455 PtaJXT3A12A1202 Poplar cDNA library ... 178 3e-044
gb|CK103101.1|CK103101 G103P49.5pR Populus tension wood cDN... 177 5e-044
gb|CN520973.1|CN520973 GQ0105.B3_K21 GQ010 Populus trichoca... 176 1e-043
gb|CX169075.1|CX169075 F08_69-78_12.ab1 leaf inoculated wit... 176 1e-043
gb|CF119060.1|CF119060 MTU10CS.P12.H12 Aspen stem cDNA Libr... 176 1e-043
gb|BI129788.1|BI129788 G095P61Y Populus cambium cDNA librar... 175 2e-043
gb|BI131744.1|BI131744 G125P08Y Populus cambium cDNA librar... 175 2e-043
gb|CK319038.1|CK319038 X9P06b12 Populus stem seasonal libra... 175 2e-043
gb|CX657777.1|CX657777 PO01005B11 Poplar SC cDNA library Po... 175 2e-043
gb|DT472200.1|DT472200 WS01225.BR.1_M09 PT-GT-FL-A-3 Populu... 175 2e-043
gb|BI131276.1|BI131276 G118P15Y Populus cambium cDNA librar... 174 4e-043
gb|CF237149.1|CF237149 Ptajxtjxt2F5F0511 Poplar cDNA librar... 174 4e-043
gb|AY341026.1| Populus tremuloides sucrose synthase mRNA, c... 174 5e-043
gb|BI130316.1|BI130316 G103P76Y Populus cambium cDNA librar... 172 1e-042
gb|BI131511.1|BI131511 G121P89Y Populus cambium cDNA librar... 171 2e-042
gb|CF235263.1|CF235263 PtaJXT0020F9F0911 Poplar cDNA librar... 171 3e-042
gb|BI130271.1|BI130271 G103P21Y Populus cambium cDNA librar... 169 1e-041
gb|CF233466.1|CF233466 PtaJXO0023H9H0915 Poplar cDNA librar... 169 1e-041
gb|CF236082.1|CF236082 PtaJXT0030D7D0707 Poplar cDNA librar... 155 5e-039
gb|CK319573.1|CK319573 B9SP02h04 Populus stem seasonal libr... 121 6e-037
gb|AJ775898.1|AJ775898 AJ775898 Populus euphratica root 3-6... 144 6e-036
gb|BI130652.1|BI130652 G108P76Y Populus cambium cDNA librar... 147 7e-035
gb|BI130127.1|BI130127 G100P68Y Populus cambium cDNA librar... 145 2e-034
gb|CN519255.1|CN519255 GQ0104.B3_D16 GQ010 Populus trichoca... 142 2e-033
gb|CF234998.1|CF234998 PtaJXT0017F5F0511 Poplar cDNA librar... 111 2e-031
gb|AI162587.1|AI162587 A019P79U Hybrid aspen plasmid librar... 83 3e-029
gb|CN517985.1|CN517985 GQ0092.B3_C05 GQ009 Populus trichoca... 127 8e-029
gb|BI128475.1|BI128475 G076P35Y Populus cambium cDNA librar... 126 1e-028
gb|BI132288.1|BI132288 G134P67Y Populus cambium cDNA librar... 113 3e-028
gb|CX171077.1|CX171077 B07_69-63_03.ab1 leaf inoculated wit... 125 3e-028
gb|CK320848.1|CK320848 X9SP07c09 Populus stem seasonal libr... 122 3e-027
gb|BI128330.1|BI128330 G074P31Y Populus cambium cDNA librar... 117 5e-026
gb|CF234726.1|CF234726 PtaJXT0014D6D0608 Poplar cDNA librar... 112 1e-024
gb|BP928698.1|BP928698 BP928698 full-length enriched poplar... 112 1e-024
gb|CK103506.1|CK103506 G120P78.5pR Populus tension wood cDN... 108 3e-023
gb|BI127350.1|BI127350 G058P96Y Populus cambium cDNA librar... 108 4e-023
gb|BI128110.1|BI128110 G070P93Y Populus cambium cDNA librar... 107 7e-023
gb|BI128348.1|BI128348 G074P55Y Populus cambium cDNA librar... 106 1e-022
gb|CF216331.1|CF216331 PT1162 Hybrid aspen xylem up-regulat... 106 1e-022
gb|BI130456.1|BI130456 G105P82Y Populus cambium cDNA librar... 105 2e-022
gb|DT509220.1|DT509220 WS02423.BR_C06 PTxD-ICC-N-A-14 Popul... 105 2e-022
gb|BI130293.1|BI130293 G103P48Y Populus cambium cDNA librar... 65 4e-022
gb|AJ772533.1|AJ772533 AJ772533 Populus euphratica shoot in... 104 6e-022
gb|BU820099.1|BU820099 UA51CPC06 Populus tremula cambium cD... 103 1e-021
gb|AI162073.1|AI162073 A011P70U Hybrid aspen plasmid librar... 91 2e-021
gb|CK116502.1|CK116502 B012P78 Hybrid aspen plasmid library... 102 2e-021
gb|BU821510.1|BU821510 UB24CPB03 Populus tremula cambium cD... 101 3e-021
>gb|BU820365.1|BU820365 UA54DPD02 Populus tremula cambium cDNA library Populus tremula cDNA
5 prime, mRNA sequence
Length = 551
Score = 186 bits (400), Expect = 1e-046
Identities = 78/102 (76%), Positives = 88/102 (86%)
Frame = +3 / +2
Query: 3 RVVHGIDVFDPKFNIVSPGADMSIYFPHTEKAKRLTSLHGSIENLIYDPEQNDEHIGHLD 182
RVVHGI+VFD KFNIVSPGADM IYFP+++ KRLT+LHGSIE ++YD EQ DE IG L
Sbjct: 173 RVVHGINVFDTKFNIVSPGADMDIYFPYSDNQKRLTTLHGSIEKMLYDSEQTDEWIGSLT 352
Query: 183 DRSKPILFSMARLDRVKNITGLVEAFAKCAKLRELVNLVVVA 308
DRSKPI+FSMARLDRVKNITGLVE + K +LRELVNLVVVA
Sbjct: 353 DRSKPIIFSMARLDRVKNITGLVECYGKNTRLRELVNLVVVA 478
Score = 109 bits (233), Expect = 1e-023
Identities = 59/102 (57%), Positives = 63/102 (61%)
Frame = -1 / -3
Query: 307 ATTTRFTXXXXXXXXXXXXXSPVMFFTLSSLAMEKRMGFDRSSRCPMCSSFCSGS*IKFS 128
ATTTRFT +PVMF T SSLAMEK MGFD S R P+ SS CS S FS
Sbjct: 477 ATTTRFTSSLSLVFLP*HSTNPVMFLTRSSLAMEKIMGFDLSVRLPIHSSVCSESYNIFS 298
Query: 127 IEP*REVSRLAFSVCGKYMDMSAPGETILNFGSKTSIPWTTR 2
IEP R VS S GK M +SAPGETILNF S T +P TTR
Sbjct: 297 IEPCRVVSLF*LSEYGK*MSISAPGETILNFVSNTLMP*TTR 172
Score = 100 bits (213), Expect = 8e-021
Identities = 48/105 (45%), Positives = 67/105 (63%)
Frame = -3 / -2
Query: 320 VPVRCNDDKVYQLPQLSALSKSFDQPCYVLHPVESCHGEEDGL*PVIQMPNVFIVLLRVI 141
+ V + DKV+QLPQ L+ + Q CYVL PV+ CHG+ GL*P+ Q N I LLR+I
Sbjct: 490 INVTSHHDKVHQLPQSGILTIALYQSCYVLDPVQPCHGKNYGL*PIGQTTNPLISLLRII 311
Query: 140 NQIFD*TMKRGESLGLLGMWKVYGHVSSRRDYIELWIEDIDPMDN 6
+F *TM +S ++ +W+V H+ RRD IEL I+ I+ M+N
Sbjct: 310 *HLFY*TM*GCKSFLIVRVWEVNVHIGPRRDDIELCIKYINAMNN 176
>gb|BU879341.1|BU879341 V059A06 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 530
Score = 185 bits (398), Expect = 2e-046
Identities = 77/102 (75%), Positives = 90/102 (88%)
Frame = +3 / +1
Query: 3 RVVHGIDVFDPKFNIVSPGADMSIYFPHTEKAKRLTSLHGSIENLIYDPEQNDEHIGHLD 182
RVVHGI+VFD KFNIVSPGADM IYFP+++K KRLT+LHGSIE ++YD EQ D+ IG L
Sbjct: 73 RVVHGINVFDTKFNIVSPGADMDIYFPYSDKQKRLTTLHGSIEKMLYDSEQTDDWIGTLT 252
Query: 183 DRSKPILFSMARLDRVKNITGLVEAFAKCAKLRELVNLVVVA 308
D+SKPI+FSMARLDRVKNI+GLVE + K A+LRELVNLVVVA
Sbjct: 253 DKSKPIIFSMARLDRVKNISGLVECYGKNARLRELVNLVVVA 378
Score = 105 bits (225), Expect = 2e-022
Identities = 57/102 (55%), Positives = 61/102 (59%)
Frame = -1 / -1
Query: 307 ATTTRFTXXXXXXXXXXXXXSPVMFFTLSSLAMEKRMGFDRSSRCPMCSSFCSGS*IKFS 128
ATTTRFT +P MF T SSLAMEK MGFD S P+ SS CS S FS
Sbjct: 377 ATTTRFTSSLSLAFLP*HSTNPDMFLTRSSLAMEKIMGFDLSVSVPIQSSVCSESYNIFS 198
Query: 127 IEP*REVSRLAFSVCGKYMDMSAPGETILNFGSKTSIPWTTR 2
IEP R VS S GK M +SAPGETILNF S T +P TTR
Sbjct: 197 IEPCRVVSLFCLSEYGK*MSISAPGETILNFVSNTLMP*TTR 72
>gb|CV234154.1|CV234154 WS01213.B21_N07 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01213_N07 3', mRNA sequence
Length = 713
Score = 185 bits (398), Expect = 2e-046
Identities = 77/102 (75%), Positives = 90/102 (88%)
Frame = +3 / -2
Query: 3 RVVHGIDVFDPKFNIVSPGADMSIYFPHTEKAKRLTSLHGSIENLIYDPEQNDEHIGHLD 182
RVVHGI+VFD KFNIVSPGADM IYFP+++K KRLT+LHGSIE ++YD EQ D+ IG L
Sbjct: 709 RVVHGINVFDTKFNIVSPGADMDIYFPYSDKQKRLTTLHGSIEKMLYDSEQTDDWIGTLT 530
Query: 183 DRSKPILFSMARLDRVKNITGLVEAFAKCAKLRELVNLVVVA 308
D+SKPI+FSMARLDRVKNI+GLVE + K A+LRELVNLVVVA
Sbjct: 529 DKSKPIIFSMARLDRVKNISGLVECYGKNARLRELVNLVVVA 404
Score = 105 bits (225), Expect = 2e-022
Identities = 57/102 (55%), Positives = 61/102 (59%)
Frame = -1 / +3
Query: 307 ATTTRFTXXXXXXXXXXXXXSPVMFFTLSSLAMEKRMGFDRSSRCPMCSSFCSGS*IKFS 128
ATTTRFT +P MF T SSLAMEK MGFD S P+ SS CS S FS
Sbjct: 405 ATTTRFTSSLSLAFLP*HSTNPDMFLTRSSLAMEKIMGFDLSVSVPIQSSVCSESYNIFS 584
Query: 127 IEP*REVSRLAFSVCGKYMDMSAPGETILNFGSKTSIPWTTR 2
IEP R VS S GK M +SAPGETILNF S T +P TTR
Sbjct: 585 IEPCRVVSLFCLSEYGK*MSISAPGETILNFVSNTLMP*TTR 710
>gb|CF229780.1|CF229780 PtaXM0029F11F1111 Poplar cDNA library from mature xylem Populus
alba x Populus tremula cDNA 5', mRNA sequence
Length = 656
Score = 178 bits (384), Expect = 2e-044
Identities = 78/114 (68%), Positives = 87/114 (76%)
Frame = +3 / +1
Query: 3 RVVHGIDVFDPKFNIVSPGADMSIYFPHTEKAKRLTSLHGSIENLIYDPEQNDEHIGHLD 182
RVVHGIDVFDPKFNIVSPGAD SIYFP+TE+ LTS HG IE L+Y P +NDEH+ L
Sbjct: 58 RVVHGIDVFDPKFNIVSPGADESIYFPYTEEKLGLTSFHGEIEELLYSPVENDEHLCVLK 237
Query: 183 DRSKPILFSMARLDRVKNITGLVEAFAKCAKLRELVNLVVVATHGHSASGIYEE 344
DR+KPILF+MARLDRVKN+TGLVE + K KLREL NLVVV S EE
Sbjct: 238 DRNKPILFTMARLDRVKNLTGLVEWYGKNTKLRELANLVVVGGDRRKESKDIEE 399
>gb|BI130722.1|BI130722 G109P76Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 484
Score = 178 bits (383), Expect = 3e-044
Identities = 78/114 (68%), Positives = 87/114 (76%)
Frame = +3 / +1
Query: 3 RVVHGIDVFDPKFNIVSPGADMSIYFPHTEKAKRLTSLHGSIENLIYDPEQNDEHIGHLD 182
RVVHGIDVFDPKFNIVSPGAD SIYFP+TE+ RLTS H IE L+Y P +NDEH+ L
Sbjct: 103 RVVHGIDVFDPKFNIVSPGADESIYFPYTEEKLRLTSFHEEIEELLYSPVENDEHLCVLK 282
Query: 183 DRSKPILFSMARLDRVKNITGLVEAFAKCAKLRELVNLVVVATHGHSASGIYEE 344
DR+KPILF+MARLDRVKN+TGLVE + K KLREL NLVVV S EE
Sbjct: 283 DRNKPILFTMARLDRVKNLTGLVEWYGKNTKLRELANLVVVGGDRRKESKDIEE 444
>gb|BI130908.1|BI130908 G112P52Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 485
Score = 178 bits (383), Expect = 3e-044
Identities = 78/114 (68%), Positives = 87/114 (76%)
Frame = +3 / +3
Query: 3 RVVHGIDVFDPKFNIVSPGADMSIYFPHTEKAKRLTSLHGSIENLIYDPEQNDEHIGHLD 182
RVVHGIDVFDPKFNIVSPGAD SIYFP+TE+ RLTS H IE L+Y P +NDEH+ L
Sbjct: 102 RVVHGIDVFDPKFNIVSPGADESIYFPYTEEKLRLTSFHEEIEELLYSPVENDEHLCVLK 281
Query: 183 DRSKPILFSMARLDRVKNITGLVEAFAKCAKLRELVNLVVVATHGHSASGIYEE 344
DR+KPILF+MARLDRVKN+TGLVE + K KLREL NLVVV S EE
Sbjct: 282 DRNKPILFTMARLDRVKNLTGLVEWYGKNTKLRELANLVVVGGDRRKESKDIEE 443
>gb|BU831561.1|BU831561 T023A06 Populus apical shoot cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 577
Score = 178 bits (383), Expect = 3e-044
Identities = 78/114 (68%), Positives = 87/114 (76%)
Frame = +3 / +1
Query: 3 RVVHGIDVFDPKFNIVSPGADMSIYFPHTEKAKRLTSLHGSIENLIYDPEQNDEHIGHLD 182
RVVHGIDVFDPKFNIVSPGAD SIYFP+TE+ RLTS H IE L+Y P +NDEH+ L
Sbjct: 205 RVVHGIDVFDPKFNIVSPGADESIYFPYTEEKLRLTSFHEEIEELLYSPVENDEHLCVLK 384
Query: 183 DRSKPILFSMARLDRVKNITGLVEAFAKCAKLRELVNLVVVATHGHSASGIYEE 344
DR+KPILF+MARLDRVKN+TGLVE + K KLREL NLVVV S EE
Sbjct: 385 DRNKPILFTMARLDRVKNLTGLVEWYGKNTKLRELANLVVVGGDRRKESKDIEE 546
>gb|BU895169.1|BU895169 X020C01 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 568
Score = 178 bits (383), Expect = 3e-044
Identities = 78/114 (68%), Positives = 87/114 (76%)
Frame = +3 / +3
Query: 3 RVVHGIDVFDPKFNIVSPGADMSIYFPHTEKAKRLTSLHGSIENLIYDPEQNDEHIGHLD 182
RVVHGIDVFDPKFNIVSPGAD SIYFP+TE+ RLTS H IE L+Y P +NDEH+ L
Sbjct: 84 RVVHGIDVFDPKFNIVSPGADESIYFPYTEEKLRLTSFHEEIEELLYSPVENDEHLCVLK 263
Query: 183 DRSKPILFSMARLDRVKNITGLVEAFAKCAKLRELVNLVVVATHGHSASGIYEE 344
DR+KPILF+MARLDRVKN+TGLVE + K KLREL NLVVV S EE
Sbjct: 264 DRNKPILFTMARLDRVKNLTGLVEWYGKNTKLRELANLVVVGGDRRKESKDIEE 425
>gb|CF119737.1|CF119737 MTU10CS.P5.G01 Aspen stem cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 398
Score = 178 bits (383), Expect = 3e-044
Identities = 78/114 (68%), Positives = 87/114 (76%)
Frame = +3 / +1
Query: 3 RVVHGIDVFDPKFNIVSPGADMSIYFPHTEKAKRLTSLHGSIENLIYDPEQNDEHIGHLD 182
RVVHGIDVFDPKFNIVSPGAD SIYFP+TE+ RLTS H IE L+Y P +NDEH+ L
Sbjct: 37 RVVHGIDVFDPKFNIVSPGADESIYFPYTEQKLRLTSFHEEIEELLYSPVENDEHLCVLK 216
Query: 183 DRSKPILFSMARLDRVKNITGLVEAFAKCAKLRELVNLVVVATHGHSASGIYEE 344
DR+KPILF+MARLDRVKN+TGLVE + K KLREL NLVVV S EE
Sbjct: 217 DRNKPILFTMARLDRVKNLTGLVEWYGKNTKLRELANLVVVGGDRRKESKDIEE 378
>gb|CF234458.1|CF234458 Ptajxojxo2H10H1016 Poplar cDNA library from young opposite xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 677
Score = 178 bits (383), Expect = 3e-044
Identities = 78/114 (68%), Positives = 87/114 (76%)
Frame = +3 / +2
Query: 3 RVVHGIDVFDPKFNIVSPGADMSIYFPHTEKAKRLTSLHGSIENLIYDPEQNDEHIGHLD 182
RVVHGIDVFDPKFNIVSPGAD SIYFP+TE+ RLTS H IE L+Y P +NDEH+ L
Sbjct: 308 RVVHGIDVFDPKFNIVSPGADESIYFPYTEEKLRLTSFHEEIEELLYSPVENDEHLCVLK 487
Query: 183 DRSKPILFSMARLDRVKNITGLVEAFAKCAKLRELVNLVVVATHGHSASGIYEE 344
DR+KPILF+MARLDRVKN+TGLVE + K KLREL NLVVV S EE
Sbjct: 488 DRNKPILFTMARLDRVKNLTGLVEWYGKNTKLRELANLVVVGGDRRKESKDIEE 649
>gb|CF234532.1|CF234532 PtaJXO0010H6A0701 Poplar cDNA library from young opposite xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 705
Score = 178 bits (383), Expect = 3e-044
Identities = 78/114 (68%), Positives = 87/114 (76%)
Frame = +3 / +1
Query: 3 RVVHGIDVFDPKFNIVSPGADMSIYFPHTEKAKRLTSLHGSIENLIYDPEQNDEHIGHLD 182
RVVHGIDVFDPKFNIVSPGAD SIYFP+TE+ RLTS H IE L+Y P +NDEH+ L
Sbjct: 178 RVVHGIDVFDPKFNIVSPGADESIYFPYTEEKLRLTSFHEEIEELLYSPVENDEHLCVLK 357
Query: 183 DRSKPILFSMARLDRVKNITGLVEAFAKCAKLRELVNLVVVATHGHSASGIYEE 344
DR+KPILF+MARLDRVKN+TGLVE + K KLREL NLVVV S EE
Sbjct: 358 DRNKPILFTMARLDRVKNLTGLVEWYGKNTKLRELANLVVVGGDRRKESKDIEE 519
>gb|CF234728.1|CF234728 PtaJXT0014D8D0808 Poplar cDNA library from young tension xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 474
Score = 178 bits (383), Expect = 3e-044
Identities = 78/114 (68%), Positives = 87/114 (76%)
Frame = +3 / +2
Query: 3 RVVHGIDVFDPKFNIVSPGADMSIYFPHTEKAKRLTSLHGSIENLIYDPEQNDEHIGHLD 182
RVVHGIDVFDPKFNIVSPGAD SIYFP+TE+ RLTS H IE L+Y P +NDEH+ L
Sbjct: 113 RVVHGIDVFDPKFNIVSPGADESIYFPYTEEKLRLTSFHEEIEELLYSPVENDEHLCVLK 292
Query: 183 DRSKPILFSMARLDRVKNITGLVEAFAKCAKLRELVNLVVVATHGHSASGIYEE 344
DR+KPILF+MARLDRVKN+TGLVE + K KLREL NLVVV S EE
Sbjct: 293 DRNKPILFTMARLDRVKNLTGLVEWYGKNTKLRELANLVVVGGDRRKESKDIEE 454
>gb|CF236455.1|CF236455 PtaJXT3A12A1202 Poplar cDNA library from young tension xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 688
Score = 178 bits (383), Expect = 3e-044
Identities = 78/114 (68%), Positives = 87/114 (76%)
Frame = +3 / +2
Query: 3 RVVHGIDVFDPKFNIVSPGADMSIYFPHTEKAKRLTSLHGSIENLIYDPEQNDEHIGHLD 182
RVVHGIDVFDPKFNIVSPGAD SIYFP+TE+ RLTS H IE L+Y P +NDEH+ L
Sbjct: 116 RVVHGIDVFDPKFNIVSPGADESIYFPYTEEKLRLTSFHEEIEELLYSPVENDEHLCVLK 295
Query: 183 DRSKPILFSMARLDRVKNITGLVEAFAKCAKLRELVNLVVVATHGHSASGIYEE 344
DR+KPILF+MARLDRVKN+TGLVE + K KLREL NLVVV S EE
Sbjct: 296 DRNKPILFTMARLDRVKNLTGLVEWYGKNTKLRELANLVVVGGDRRKESKDIEE 457
>gb|CK103101.1|CK103101 G103P49.5pR Populus tension wood cDNA library Populus tremula x
Populus tremuloides cDNA clone G103P49 5', mRNA sequence
Length = 524
Score = 177 bits (381), Expect = 5e-044
Identities = 75/101 (74%), Positives = 84/101 (83%)
Frame = +3 / +3
Query: 3 RVVHGIDVFDPKFNIVSPGADMSIYFPHTEKAKRLTSLHGSIENLIYDPEQNDEHIGHLD 182
RVVHGIDVFDPKFNIVSPGAD SIYFP+TE+ RLTS H IE L+Y P +NDEH+ L
Sbjct: 186 RVVHGIDVFDPKFNIVSPGADESIYFPYTEEKLRLTSFHEEIEELLYSPVENDEHLCVLK 365
Query: 183 DRSKPILFSMARLDRVKNITGLVEAFAKCAKLRELVNLVVV 305
DR+KPILF+MARLDRVKN+TGLVE + K KLREL NLVVV
Sbjct: 366 DRNKPILFTMARLDRVKNLTGLVEWYGKNTKLRELANLVVV 488
>gb|CN520973.1|CN520973 GQ0105.B3_K21 GQ010 Populus trichocarpa x Populus deltoides cDNA
clone GQ0105_K21 5', mRNA sequence
Length = 821
Score = 176 bits (379), Expect = 1e-043
Identities = 78/114 (68%), Positives = 86/114 (75%)
Frame = +3 / +3
Query: 3 RVVHGIDVFDPKFNIVSPGADMSIYFPHTEKAKRLTSLHGSIENLIYDPEQNDEHIGHLD 182
RVVHGIDVFDPKFNIVSPGAD SIYFP+TEK RLTS H IE L+Y +NDEH+ L
Sbjct: 183 RVVHGIDVFDPKFNIVSPGADESIYFPYTEKKLRLTSFHEEIEELLYSSVENDEHLCVLK 362
Query: 183 DRSKPILFSMARLDRVKNITGLVEAFAKCAKLRELVNLVVVATHGHSASGIYEE 344
DR+KPILF+MARLDRVKN+TGLVE + K KLREL NLVVV S EE
Sbjct: 363 DRNKPILFTMARLDRVKNLTGLVEWYGKNTKLRELANLVVVGGDRRKESKDIEE 524
>gb|CX169075.1|CX169075 F08_69-78_12.ab1 leaf inoculated with Marssonia pathogen of Populus
deltoides Populus deltoides cDNA, mRNA sequence
Length = 653
Score = 176 bits (379), Expect = 1e-043
Identities = 78/114 (68%), Positives = 86/114 (75%)
Frame = +3 / +1
Query: 3 RVVHGIDVFDPKFNIVSPGADMSIYFPHTEKAKRLTSLHGSIENLIYDPEQNDEHIGHLD 182
RVVHGIDVFDPKFNIVSPGAD SIYFP+TEK RLTS H IE L+Y +NDEH+ L
Sbjct: 187 RVVHGIDVFDPKFNIVSPGADESIYFPYTEKKLRLTSFHEEIEELLYSSVENDEHLCVLK 366
Query: 183 DRSKPILFSMARLDRVKNITGLVEAFAKCAKLRELVNLVVVATHGHSASGIYEE 344
DR+KPILF+MARLDRVKN+TGLVE + K KLREL NLVVV S EE
Sbjct: 367 DRNKPILFTMARLDRVKNLTGLVEWYGKNTKLRELANLVVVGGDRRKESKDIEE 528
>gb|CF119060.1|CF119060 MTU10CS.P12.H12 Aspen stem cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 398
Score = 176 bits (378), Expect = 1e-043
Identities = 77/114 (67%), Positives = 86/114 (75%)
Frame = +3 / +1
Query: 3 RVVHGIDVFDPKFNIVSPGADMSIYFPHTEKAKRLTSLHGSIENLIYDPEQNDEHIGHLD 182
RVVHGIDVFDPKFNIV PGAD SIYFP+TE+ RLTS H IE L+Y P +NDEH+ L
Sbjct: 37 RVVHGIDVFDPKFNIVPPGADESIYFPYTEQKLRLTSFHEEIEELLYSPVENDEHLCVLK 216
Query: 183 DRSKPILFSMARLDRVKNITGLVEAFAKCAKLRELVNLVVVATHGHSASGIYEE 344
DR+KPILF+MARLDRVKN+TGLVE + K KLREL NLVVV S EE
Sbjct: 217 DRNKPILFTMARLDRVKNLTGLVEWYGKNTKLRELANLVVVGGDRRKESKDIEE 378
>gb|BI129788.1|BI129788 G095P61Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 485
Score = 175 bits (377), Expect = 2e-043
Identities = 75/114 (65%), Positives = 89/114 (78%)
Frame = +3 / +2
Query: 3 RVVHGIDVFDPKFNIVSPGADMSIYFPHTEKAKRLTSLHGSIENLIYDPEQNDEHIGHLD 182
RVVHGIDVFDPKFNIVSPGAD SIYFP+T++ +RLTS H I+ L+Y P +N+EH+ L
Sbjct: 137 RVVHGIDVFDPKFNIVSPGADESIYFPYTDEKRRLTSFHPEIDELLYSPVENEEHLCVLK 316
Query: 183 DRSKPILFSMARLDRVKNITGLVEAFAKCAKLRELVNLVVVATHGHSASGIYEE 344
DR+KPILF+MARLDRVKN++GLVE + K KLRELVNLVVV S EE
Sbjct: 317 DRNKPILFTMARLDRVKNLSGLVEWYGKNTKLRELVNLVVVGGDRRKESKDLEE 478
>gb|BI131744.1|BI131744 G125P08Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 482
Score = 175 bits (377), Expect = 2e-043
Identities = 75/114 (65%), Positives = 89/114 (78%)
Frame = +3 / +2
Query: 3 RVVHGIDVFDPKFNIVSPGADMSIYFPHTEKAKRLTSLHGSIENLIYDPEQNDEHIGHLD 182
RVVHGIDVFDPKFNIVSPGAD SIYFP+T++ +RLTS H I+ L+Y P +N+EH+ L
Sbjct: 32 RVVHGIDVFDPKFNIVSPGADESIYFPYTDEKRRLTSFHPEIDELLYSPVENEEHLCVLK 211
Query: 183 DRSKPILFSMARLDRVKNITGLVEAFAKCAKLRELVNLVVVATHGHSASGIYEE 344
DR+KPILF+MARLDRVKN++GLVE + K KLRELVNLVVV S EE
Sbjct: 212 DRNKPILFTMARLDRVKNLSGLVEWYGKNTKLRELVNLVVVGGDRRKESKDLEE 373
>gb|CK319038.1|CK319038 X9P06b12 Populus stem seasonal library Populus deltoides cDNA, mRNA
sequence
Length = 708
Score = 175 bits (377), Expect = 2e-043
Identities = 75/101 (74%), Positives = 83/101 (82%)
Frame = +3 / +1
Query: 3 RVVHGIDVFDPKFNIVSPGADMSIYFPHTEKAKRLTSLHGSIENLIYDPEQNDEHIGHLD 182
RVVHGIDVFDPKFNIVSPGAD SIYFP+TEK RLTS H IE L+Y +NDEH+ L
Sbjct: 298 RVVHGIDVFDPKFNIVSPGADESIYFPYTEKKLRLTSFHEEIEELLYSSVENDEHLCVLK 477
Query: 183 DRSKPILFSMARLDRVKNITGLVEAFAKCAKLRELVNLVVV 305
DR+KPILF+MARLDRVKN+TGLVE + K KLREL NLVVV
Sbjct: 478 DRNKPILFTMARLDRVKNLTGLVEWYGKNTKLRELANLVVV 600
>gb|CX657777.1|CX657777 PO01005B11 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO01005B11 5', mRNA sequence
Length = 701
Score = 175 bits (377), Expect = 2e-043
Identities = 75/114 (65%), Positives = 89/114 (78%)
Frame = +3 / +2
Query: 3 RVVHGIDVFDPKFNIVSPGADMSIYFPHTEKAKRLTSLHGSIENLIYDPEQNDEHIGHLD 182
RVVHGIDVFDPKFNIVSPGAD SIYFP+T++ +RLTS H I+ L+Y P +N+EH+ L
Sbjct: 14 RVVHGIDVFDPKFNIVSPGADESIYFPYTDEKRRLTSFHPEIDELLYSPVENEEHLCVLK 193
Query: 183 DRSKPILFSMARLDRVKNITGLVEAFAKCAKLRELVNLVVVATHGHSASGIYEE 344
DR+KPILF+MARLDRVKN++GLVE + K KLRELVNLVVV S EE
Sbjct: 194 DRNKPILFTMARLDRVKNLSGLVEWYGKNTKLRELVNLVVVGGDRRKESKDLEE 355
>gb|DT472200.1|DT472200 WS01225.BR.1_M09 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01225_M09 5', mRNA sequence
Length = 899
Score = 175 bits (377), Expect = 2e-043
Identities = 75/114 (65%), Positives = 89/114 (78%)
Frame = +3 / +3
Query: 3 RVVHGIDVFDPKFNIVSPGADMSIYFPHTEKAKRLTSLHGSIENLIYDPEQNDEHIGHLD 182
RVVHGIDVFDPKFNIVSPGAD SIYFP+T++ +RLTS H I+ L+Y P +N+EH+ L
Sbjct: 39 RVVHGIDVFDPKFNIVSPGADESIYFPYTDEKRRLTSFHPEIDELLYSPVENEEHLCVLK 218
Query: 183 DRSKPILFSMARLDRVKNITGLVEAFAKCAKLRELVNLVVVATHGHSASGIYEE 344
DR+KPILF+MARLDRVKN++GLVE + K KLRELVNLVVV S EE
Sbjct: 219 DRNKPILFTMARLDRVKNLSGLVEWYGKNTKLRELVNLVVVGGDRRKESKDLEE 380
>gb|BI131276.1|BI131276 G118P15Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 360
Score = 174 bits (375), Expect = 4e-043
Identities = 77/114 (67%), Positives = 86/114 (75%)
Frame = +3 / +3
Query: 3 RVVHGIDVFDPKFNIVSPGADMSIYFPHTEKAKRLTSLHGSIENLIYDPEQNDEHIGHLD 182
RVV GIDVFDPKFNIVSPGAD SIYFP+TE+ RLTS H IE L+Y P +NDEH+ L
Sbjct: 12 RVVRGIDVFDPKFNIVSPGADESIYFPYTEEKLRLTSFHEEIEELLYSPVENDEHLCVLK 191
Query: 183 DRSKPILFSMARLDRVKNITGLVEAFAKCAKLRELVNLVVVATHGHSASGIYEE 344
DR+KPILF+MARLDRVKN+TGLVE + K KLREL NLVVV S EE
Sbjct: 192 DRNKPILFTMARLDRVKNLTGLVEWYGKNTKLRELANLVVVGGDRRKESKDIEE 353
>gb|CF237149.1|CF237149 Ptajxtjxt2F5F0511 Poplar cDNA library from young tension xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 565
Score = 174 bits (375), Expect = 4e-043
Identities = 74/101 (73%), Positives = 83/101 (82%)
Frame = +3 / +3
Query: 3 RVVHGIDVFDPKFNIVSPGADMSIYFPHTEKAKRLTSLHGSIENLIYDPEQNDEHIGHLD 182
RVVHGIDVFDPKFNIVSPGAD SIYFP+TE+ RLTS H IE L+Y P +NDEH+ L
Sbjct: 138 RVVHGIDVFDPKFNIVSPGADESIYFPYTEEKLRLTSFHEEIEELLYSPVENDEHLCVLK 317
Query: 183 DRSKPILFSMARLDRVKNITGLVEAFAKCAKLRELVNLVVV 305
DR+KPILF+MARLDRV N+TGLVE + K KLREL NLVVV
Sbjct: 318 DRNKPILFTMARLDRVXNLTGLVEWYGKNTKLRELANLVVV 440
>gb|AY341026.1| Populus tremuloides sucrose synthase mRNA, complete cds
Length = 2792
Score = 174 bits (374), Expect = 5e-043
Identities = 76/114 (66%), Positives = 87/114 (76%)
Frame = +3 / +3
Query: 3 RVVHGIDVFDPKFNIVSPGADMSIYFPHTEKAKRLTSLHGSIENLIYDPEQNDEHIGHLD 182
RVVHGIDVFDPKFNIVSPGAD SIYFP+TE+ RLTS H IE L+Y P +NDEH+ L
Sbjct: 1644 RVVHGIDVFDPKFNIVSPGADESIYFPYTEQKLRLTSFHEEIEELLYSPVENDEHLCVLK 1823
Query: 183 DRSKPILFSMARLDRVKNITGLVEAFAKCAKLRELVNLVVVATHGHSASGIYEE 344
DR+KPILF+MARLDRVKN+TGLVE + K KLRE++NL VV S EE
Sbjct: 1824 DRNKPILFTMARLDRVKNLTGLVEWYGKNTKLREVLNLDVVGGDRRKESKDIEE 1985
>gb|BI130316.1|BI130316 G103P76Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 520
Score = 172 bits (371), Expect = 1e-042
Identities = 74/114 (64%), Positives = 88/114 (77%)
Frame = +3 / +2
Query: 3 RVVHGIDVFDPKFNIVSPGADMSIYFPHTEKAKRLTSLHGSIENLIYDPEQNDEHIGHLD 182
RVVHGIDVFDPKFNIVSPGAD SIYFP+T++ +R TS H I+ L+Y P +N+EH+ L
Sbjct: 59 RVVHGIDVFDPKFNIVSPGADESIYFPYTDEKRRWTSFHPEIDELLYSPVENEEHLCVLK 238
Query: 183 DRSKPILFSMARLDRVKNITGLVEAFAKCAKLRELVNLVVVATHGHSASGIYEE 344
DR+KPILF+MARLDRVKN++GLVE + K KLRELVNLVVV S EE
Sbjct: 239 DRNKPILFTMARLDRVKNLSGLVEWYGKNTKLRELVNLVVVGGDRRKESKDLEE 400
>gb|BI131511.1|BI131511 G121P89Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 482
Score = 171 bits (369), Expect = 2e-042
Identities = 74/114 (64%), Positives = 88/114 (77%)
Frame = +3 / +3
Query: 3 RVVHGIDVFDPKFNIVSPGADMSIYFPHTEKAKRLTSLHGSIENLIYDPEQNDEHIGHLD 182
RVVHGIDVFDPKFNIVSPGAD SIYFP+T++ +RLTS H I+ L+Y P +N+EH+ L
Sbjct: 18 RVVHGIDVFDPKFNIVSPGADESIYFPYTDEKRRLTSFHPEIDELLYSPVENEEHLCVLK 197
Query: 183 DRSKPILFSMARLDRVKNITGLVEAFAKCAKLRELVNLVVVATHGHSASGIYEE 344
DR+KPILF+MARLDRVKN++GLVE + K KLRELV LVVV S EE
Sbjct: 198 DRNKPILFTMARLDRVKNLSGLVEWYGKNTKLRELVYLVVVGGDRRKESKDLEE 359
>gb|CF235263.1|CF235263 PtaJXT0020F9F0911 Poplar cDNA library from young tension xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 772
Score = 171 bits (368), Expect = 3e-042
Identities = 73/101 (72%), Positives = 82/101 (81%)
Frame = +3 / +2
Query: 3 RVVHGIDVFDPKFNIVSPGADMSIYFPHTEKAKRLTSLHGSIENLIYDPEQNDEHIGHLD 182
RVVHGIDVFDPKFNIVSPGAD SIYFP+TE+ RLTS H IE L+Y P +NDEH+ L
Sbjct: 383 RVVHGIDVFDPKFNIVSPGADESIYFPYTEEKLRLTSFHEEIEELLYSPVENDEHLCVLK 562
Query: 183 DRSKPILFSMARLDRVKNITGLVEAFAKCAKLRELVNLVVV 305
DR+KPILF+MARLDRVKN+TGLVE + K LREL LVVV
Sbjct: 563 DRNKPILFTMARLDRVKNLTGLVEWYGKNTXLRELAXLVVV 685
>gb|BI130271.1|BI130271 G103P21Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 456
Score = 169 bits (364), Expect = 1e-041
Identities = 70/101 (69%), Positives = 85/101 (84%)
Frame = +3 / +2
Query: 3 RVVHGIDVFDPKFNIVSPGADMSIYFPHTEKAKRLTSLHGSIENLIYDPEQNDEHIGHLD 182
RVVHGIDVFDPKFNIVSPGAD SIYFP+T++ +R TS H I+ L+Y P +N+EH+ L
Sbjct: 59 RVVHGIDVFDPKFNIVSPGADESIYFPYTDEKRRWTSFHPEIDELLYSPVENEEHLCVLK 238
Query: 183 DRSKPILFSMARLDRVKNITGLVEAFAKCAKLRELVNLVVV 305
DR+KPILF+MARLDRVKN++GLVE + K KLRELV+LVVV
Sbjct: 239 DRNKPILFTMARLDRVKNLSGLVEWYGKNTKLRELVHLVVV 361
>gb|CF233466.1|CF233466 PtaJXO0023H9H0915 Poplar cDNA library from young opposite xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 710
Score = 169 bits (364), Expect = 1e-041
Identities = 75/113 (66%), Positives = 84/113 (74%)
Frame = +3 / +1
Query: 6 VVHGIDVFDPKFNIVSPGADMSIYFPHTEKAKRLTSLHGSIENLIYDPEQNDEHIGHLDD 185
V HGIDVFDPKFNIVSPGAD SIY P+TE+ RLTS H IE L+Y P +NDEH+ L D
Sbjct: 163 VGHGIDVFDPKFNIVSPGADESIYXPYTEEKLRLTSFHEEIEELLYSPVENDEHLCVLKD 342
Query: 186 RSKPILFSMARLDRVKNITGLVEAFAKCAKLRELVNLVVVATHGHSASGIYEE 344
R+KPILF+MARLDRVKN+TGLVE + K KLREL NLVVV S EE
Sbjct: 343 RNKPILFTMARLDRVKNLTGLVEWYGKNTKLRELANLVVVGGDRRKESKDIEE 501
>gb|CF236082.1|CF236082 PtaJXT0030D7D0707 Poplar cDNA library from young tension xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 606
Score = 155 bits (334), Expect(2) = 5e-039
Identities = 64/84 (76%), Positives = 72/84 (85%)
Frame = +3 / +3
Query: 3 RVVHGIDVFDPKFNIVSPGADMSIYFPHTEKAKRLTSLHGSIENLIYDPEQNDEHIGHLD 182
RVVHGIDVFDPKFNIVSPGAD SIYFP+TE+ RLTS H IE L+Y P +NDEH+ L
Sbjct: 282 RVVHGIDVFDPKFNIVSPGADESIYFPYTEEKLRLTSFHEEIEELLYSPVENDEHLCVLK 461
Query: 183 DRSKPILFSMARLDRVKNITGLVE 254
DR+KPILF+MARLDRVKN+TGLVE
Sbjct: 462 DRNKPILFTMARLDRVKNLTGLVE 533
Score = 24.9 bits (48), Expect(2) = 5e-039
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = +3 / +2
Query: 258 FAKCAKLRELVNLVVV 305
+ K KLREL NLVVV
Sbjct: 539 WXKNTKLRELANLVVV 586
>gb|CK319573.1|CK319573 B9SP02h04 Populus stem seasonal library Populus deltoides cDNA,
mRNA sequence
Length = 722
Score = 121 bits (259), Expect(2) = 6e-037
Identities = 56/92 (60%), Positives = 64/92 (69%)
Frame = +3 / +2
Query: 69 SIYFPHTEKAKRLTSLHGSIENLIYDPEQNDEHIGHLDDRSKPILFSMARLDRVKNITGL 248
SIYFP+TEK RLTS H IE L+Y +NDEH+ L DR+KPILF+MARLDRVKN+TGL
Sbjct: 65 SIYFPYTEKKLRLTSFHEEIEELLYSSVENDEHLCVLKDRNKPILFTMARLDRVKNLTGL 244
Query: 249 VEAFAKCAKLRELVNLVVVATHGHSASGIYEE 344
VE + K KLREL LVVV S EE
Sbjct: 245 VEWYGKNTKLRELFFLVVVGGDRRKESKDIEE 340
Score = 52.4 bits (108), Expect(2) = 6e-037
Identities = 21/26 (80%), Positives = 21/26 (80%)
Frame = +3 / +1
Query: 6 VVHGIDVFDPKFNIVSPGADMSIYFP 83
VVHGIDVFDPKFNIVSPGAD P
Sbjct: 1 VVHGIDVFDPKFNIVSPGADEQHILP 78
>gb|AJ775898.1|AJ775898 AJ775898 Populus euphratica root 3-6 months Populus euphratica cDNA
clone P0000400006H03F1, mRNA sequence
Length = 510
Score = 144 bits (308), Expect(2) = 6e-036
Identities = 64/103 (62%), Positives = 76/103 (73%)
Frame = +3 / +3
Query: 36 KFNIVSPGADMSIYFPHTEKAKRLTSLHGSIENLIYDPEQNDEHIGHLDDRSKPILFSMA 215
+ +IVSPGAD SIYFP+TE+ +RLTS H IE L+Y +NDEH+ L DR+KPILF+MA
Sbjct: 21 QIHIVSPGADESIYFPYTEEKRRLTSFHEEIEELLYSSVENDEHLCVLKDRNKPILFTMA 200
Query: 216 RLDRVKNITGLVEAFAKCAKLRELVNLVVVATHGHSASGIYEE 344
RLDRVKN+TGLVE + K KLRELVNLVVV S EE
Sbjct: 201 RLDRVKNLTGLVEWYGKNTKLRELVNLVVVGGDRRKESKDIEE 329
Score = 26.7 bits (52), Expect(2) = 6e-036
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +3 / +1
Query: 15 GIDVFDPKFNI 47
GIDVFDPKF +
Sbjct: 1 GIDVFDPKFTL 33
>gb|BI130652.1|BI130652 G108P76Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 464
Score = 147 bits (315), Expect = 7e-035
Identities = 58/82 (70%), Positives = 71/82 (86%)
Frame = +3 / +2
Query: 3 RVVHGIDVFDPKFNIVSPGADMSIYFPHTEKAKRLTSLHGSIENLIYDPEQNDEHIGHLD 182
RVVHGIDVFDPKFNIVSPGAD SIYFP+T++ +RLTS H I+ L+Y P +N+EH+ L
Sbjct: 218 RVVHGIDVFDPKFNIVSPGADESIYFPYTDEKRRLTSFHPEIDELLYSPVENEEHLCVLK 397
Query: 183 DRSKPILFSMARLDRVKNITGL 248
DR+KPILF+MARLDRVKN++GL
Sbjct: 398 DRNKPILFTMARLDRVKNLSGL 463
>gb|BI130127.1|BI130127 G100P68Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 360
Score = 145 bits (311), Expect = 2e-034
Identities = 57/81 (70%), Positives = 70/81 (86%)
Frame = +3 / +2
Query: 3 RVVHGIDVFDPKFNIVSPGADMSIYFPHTEKAKRLTSLHGSIENLIYDPEQNDEHIGHLD 182
RVVHGIDVFDPKFNIVSPGAD SIYFP+T++ +RLTS H I+ L+Y P +N+EH+ L
Sbjct: 116 RVVHGIDVFDPKFNIVSPGADESIYFPYTDEKRRLTSFHPEIDELLYSPVENEEHLCVLK 295
Query: 183 DRSKPILFSMARLDRVKNITG 245
DR+KPILF+MARLDRVKN++G
Sbjct: 296 DRNKPILFTMARLDRVKNLSG 358
>gb|CN519255.1|CN519255 GQ0104.B3_D16 GQ010 Populus trichocarpa x Populus deltoides cDNA
clone GQ0104_D16 5', mRNA sequence
Length = 735
Score = 142 bits (304), Expect = 2e-033
Identities = 60/88 (68%), Positives = 67/88 (76%)
Frame = +3 / +3
Query: 3 RVVHGIDVFDPKFNIVSPGADMSIYFPHTEKAKRLTSLHGSIENLIYDPEQNDEHIGHLD 182
RVVHGIDVFDPKFNIVSPGAD SIYFP+TEK RLTS H IE L+Y +NDEH+ L
Sbjct: 468 RVVHGIDVFDPKFNIVSPGADESIYFPYTEKKLRLTSFHEEIEELLYSSVENDEHLCVLK 647
Query: 183 DRSKPILFSMARLDRVKNITGLVEAFAK 266
DR+KPILF+MARLDRV T V + K
Sbjct: 648 DRNKPILFTMARLDRVXXXTXXVXXYGK 731
>gb|CF234998.1|CF234998 PtaJXT0017F5F0511 Poplar cDNA library from young tension xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 760
Score = 111 bits (237), Expect(2) = 2e-031
Identities = 45/63 (71%), Positives = 51/63 (80%)
Frame = +3 / +2
Query: 3 RVVHGIDVFDPKFNIVSPGADMSIYFPHTEKAKRLTSLHGSIENLIYDPEQNDEHIGHLD 182
RVVHGIDVFDPKFNIVSPGAD SIYFP+TE+ RLTS H IE L+Y P +NDEH+ L
Sbjct: 485 RVVHGIDVFDPKFNIVSPGADESIYFPYTEEKLRLTSFHEEIEELLYSPVENDEHLCVLK 664
Query: 183 DRS 191
DR+
Sbjct: 665 DRN 673
Score = 44.1 bits (90), Expect(2) = 2e-031
Identities = 18/29 (62%), Positives = 23/29 (79%)
Frame = +3 / +1
Query: 192 KPILFSMARLDRVKNITGLVEAFAKCAKL 278
+P LF+MARLDRVKN+TGLV+ + KL
Sbjct: 673 QPFLFTMARLDRVKNLTGLVKWYGXNTKL 759
>gb|AI162587.1|AI162587 A019P79U Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA 5', mRNA sequence
Length = 417
Score = 83.1 bits (175), Expect(2) = 3e-029
Identities = 35/49 (71%), Positives = 38/49 (77%)
Frame = +3 / +1
Query: 3 RVVHGIDVFDPKFNIVSPGADMSIYFPHTEKAKRLTSLHGSIENLIYDP 149
RVVHGI VF PKFNIVSPGAD SIYFP+TE+ RLTS H IE L+ P
Sbjct: 145 RVVHGIXVFVPKFNIVSPGADESIYFPYTEEXLRLTSFHEEIEELLTAP 291
Score = 65.2 bits (136), Expect(2) = 3e-029
Identities = 27/45 (60%), Positives = 33/45 (73%)
Frame = +3 / +3
Query: 141 YDPEQNDEHIGHLDDRSKPILFSMARLDRVKNITGLVEAFAKCAK 275
Y P +ND H+ L DR+KPILF+MARLD VKN+TGLV + K K
Sbjct: 282 YSPVENDXHLCVLKDRNKPILFTMARLDXVKNLTGLVXWYGKNTK 416
>gb|CN517985.1|CN517985 GQ0092.B3_C05 GQ009 Populus trichocarpa x Populus deltoides cDNA
clone GQ0092_C05 5', mRNA sequence
Length = 262
Score = 127 bits (271), Expect = 8e-029
Identities = 53/75 (70%), Positives = 59/75 (78%)
Frame = +3 / +2
Query: 3 RVVHGIDVFDPKFNIVSPGADMSIYFPHTEKAKRLTSLHGSIENLIYDPEQNDEHIGHLD 182
RVVHGIDVFDPKFNIVSP AD SIYFP+TEK TS H IE L+Y +NDEH+ L
Sbjct: 38 RVVHGIDVFDPKFNIVSPXADESIYFPYTEKKLXXTSFHEEIEELLYSSVENDEHLCVLK 217
Query: 183 DRSKPILFSMARLDR 227
DR+KPILF+MARLDR
Sbjct: 218 DRNKPILFTMARLDR 262
>gb|BI128475.1|BI128475 G076P35Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 520
Score = 126 bits (269), Expect = 1e-028
Identities = 51/70 (72%), Positives = 58/70 (82%)
Frame = +3 / +1
Query: 3 RVVHGIDVFDPKFNIVSPGADMSIYFPHTEKAKRLTSLHGSIENLIYDPEQNDEHIGHLD 182
RVVHGIDVFDPKFNIVSPGAD SIYFP+TE+ RLTS H IE L+Y P +NDEH+ L
Sbjct: 310 RVVHGIDVFDPKFNIVSPGADESIYFPYTEEKLRLTSFHEEIEELLYSPVENDEHLCVLK 489
Query: 183 DRSKPILFSM 212
DR+KPILF+M
Sbjct: 490 DRNKPILFTM 519
>gb|BI132288.1|BI132288 G134P67Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 392
Score = 113 bits (242), Expect(2) = 3e-028
Identities = 46/64 (71%), Positives = 52/64 (81%)
Frame = +3 / +2
Query: 3 RVVHGIDVFDPKFNIVSPGADMSIYFPHTEKAKRLTSLHGSIENLIYDPEQNDEHIGHLD 182
RVVHGIDVFDPKFNIVSPGAD SIYFP+TE+ RLTS H IE L+Y P +NDEH+ L
Sbjct: 164 RVVHGIDVFDPKFNIVSPGADESIYFPYTEEKLRLTSFHEEIEELLYSPVENDEHLCVLK 343
Query: 183 DRSK 194
DR+K
Sbjct: 344 DRNK 355
Score = 30.9 bits (61), Expect(2) = 3e-028
Identities = 12/14 (85%), Positives = 14/14 (100%)
Frame = +3 / +3
Query: 189 SKPILFSMARLDRV 230
+KPILF+MARLDRV
Sbjct: 351 TKPILFTMARLDRV 392
>gb|CX171077.1|CX171077 B07_69-63_03.ab1 leaf inoculated with Marssonia pathogen of Populus
deltoides Populus deltoides cDNA, mRNA sequence
Length = 686
Score = 125 bits (267), Expect = 3e-028
Identities = 54/77 (70%), Positives = 63/77 (81%)
Frame = +3 / +2
Query: 78 FPHTEKAKRLTSLHGSIENLIYDPEQNDEHIGHLDDRSKPILFSMARLDRVKNITGLVEA 257
F +K KRLT+LHGSIE ++YD EQ D+ IG L DRSKPI+FSMARLDRVKNI+GLVE
Sbjct: 17 FGTRDKQKRLTTLHGSIEKMLYDSEQTDDWIGTLTDRSKPIIFSMARLDRVKNISGLVEC 196
Query: 258 FAKCAKLRELVNLVVVA 308
+ K +LRELVNLVVVA
Sbjct: 197 YGKNTRLRELVNLVVVA 247
>gb|CK320848.1|CK320848 X9SP07c09 Populus stem seasonal library Populus deltoides cDNA,
mRNA sequence
Length = 653
Score = 122 bits (260), Expect = 3e-027
Identities = 51/70 (72%), Positives = 56/70 (80%)
Frame = +3 / +1
Query: 3 RVVHGIDVFDPKFNIVSPGADMSIYFPHTEKAKRLTSLHGSIENLIYDPEQNDEHIGHLD 182
RVVHGIDVFDPKFNIVSPGAD SIYFP+TEK RLTS H IE L Y +NDEH+ L
Sbjct: 442 RVVHGIDVFDPKFNIVSPGADESIYFPYTEKKLRLTSFHEEIEELPYSSVENDEHLCVLK 621
Query: 183 DRSKPILFSM 212
DR+KPILF+M
Sbjct: 622 DRNKPILFTM 651
>gb|BI128330.1|BI128330 G074P31Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 311
Score = 117 bits (251), Expect = 5e-026
Identities = 51/90 (56%), Positives = 65/90 (72%)
Frame = +3 / +2
Query: 75 YFPHTEKAKRLTSLHGSIENLIYDPEQNDEHIGHLDDRSKPILFSMARLDRVKNITGLVE 254
YFP+T++ +RLTS H I+ L+Y P +N+EH+ L DR+K ILF+MARLDRVKN++GLVE
Sbjct: 2 YFPYTDEKRRLTSFHPEIDELLYSPVENEEHLCVLKDRNKTILFTMARLDRVKNLSGLVE 181
Query: 255 AFAKCAKLRELVNLVVVATHGHSASGIYEE 344
+ K KLRELVNLVVV S EE
Sbjct: 182 WYGKNTKLRELVNLVVVGGDRRKESKDLEE 271
>gb|CF234726.1|CF234726 PtaJXT0014D6D0608 Poplar cDNA library from young tension xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 506
Score = 112 bits (240), Expect = 1e-024
Identities = 51/87 (58%), Positives = 60/87 (68%)
Frame = +3 / +2
Query: 84 HTEKAKRLTSLHGSIENLIYDPEQNDEHIGHLDDRSKPILFSMARLDRVKNITGLVEAFA 263
+TE+ RLTS H IE L+Y P +NDEH+ L DR+KPILF+MARLDRVKN+TGLVE +
Sbjct: 2 YTEEKLRLTSFHEEIEELLYSPVENDEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYG 181
Query: 264 KCAKLRELVNLVVVATHGHSASGIYEE 344
K KLRE NLVVV S EE
Sbjct: 182 KNTKLREXANLVVVGGDRRKESKDIEE 262
>gb|BP928698.1|BP928698 BP928698 full-length enriched poplar cDNA library Populus nigra
cDNA clone PnFL1-087_F11.f 5', mRNA sequence
Length = 549
Score = 112 bits (240), Expect = 1e-024
Identities = 45/61 (73%), Positives = 52/61 (85%)
Frame = +3 / +2
Query: 3 RVVHGIDVFDPKFNIVSPGADMSIYFPHTEKAKRLTSLHGSIENLIYDPEQNDEHIGHLD 182
RVVHGI+VFD KFNIVSPGADM IYFP+++K KRLT+LHGSIE ++YD EQ DE IG L
Sbjct: 365 RVVHGINVFDTKFNIVSPGADMDIYFPYSDKQKRLTTLHGSIEKMLYDSEQTDEWIGTLT 544
Query: 183 D 185
D
Sbjct: 545 D 547
>gb|CK103506.1|CK103506 G120P78.5pR Populus tension wood cDNA library Populus tremula x
Populus tremuloides cDNA clone G120P78 5', mRNA sequence
Length = 602
Score = 108 bits (231), Expect = 3e-023
Identities = 42/64 (65%), Positives = 52/64 (81%)
Frame = +3 / +3
Query: 3 RVVHGIDVFDPKFNIVSPGADMSIYFPHTEKAKRLTSLHGSIENLIYDPEQNDEHIGHLD 182
RVVHGIDVFDPKFNIVSPGAD SIYFP+T++ +RLTS H I+ L+Y P +N+EH+ L
Sbjct: 405 RVVHGIDVFDPKFNIVSPGADESIYFPYTDEKRRLTSFHPEIDELLYSPVENEEHLCVLK 584
Query: 183 DRSK 194
DR +
Sbjct: 585 DRKQ 596
>gb|BI127350.1|BI127350 G058P96Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 473
Score = 108 bits (230), Expect = 4e-023
Identities = 42/62 (67%), Positives = 51/62 (82%)
Frame = +3 / +1
Query: 3 RVVHGIDVFDPKFNIVSPGADMSIYFPHTEKAKRLTSLHGSIENLIYDPEQNDEHIGHLD 182
RVVHGIDVFDPKFNIVSPGAD SIYFP+T++ +RLTS H I+ L+Y P +N+EH+ L
Sbjct: 286 RVVHGIDVFDPKFNIVSPGADESIYFPYTDEKRRLTSFHPEIDELLYSPVENEEHLCVLK 465
Query: 183 DR 188
DR
Sbjct: 466 DR 471
>gb|BI128110.1|BI128110 G070P93Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 538
Score = 107 bits (228), Expect = 7e-023
Identities = 42/56 (75%), Positives = 47/56 (83%)
Frame = +3 / +1
Query: 3 RVVHGIDVFDPKFNIVSPGADMSIYFPHTEKAKRLTSLHGSIENLIYDPEQNDEHI 170
RVVHGIDVFDPKFNIVSPGAD SIYFP+TE+ RLTS H IE L+Y P +NDEH+
Sbjct: 367 RVVHGIDVFDPKFNIVSPGADESIYFPYTEEKLRLTSFHEEIEELLYSPVENDEHL 534
>gb|BI128348.1|BI128348 G074P55Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 452
Score = 106 bits (226), Expect = 1e-022
Identities = 49/81 (60%), Positives = 56/81 (69%)
Frame = +3 / +2
Query: 102 RLTSLHGSIENLIYDPEQNDEHIGHLDDRSKPILFSMARLDRVKNITGLVEAFAKCAKLR 281
RLTS IE L+Y P +NDEH+ L DR+KPILF+MARLDRVKN+TGLVE + K KLR
Sbjct: 11 RLTSCREEIEELLYSPVENDEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNTKLR 190
Query: 282 ELVNLVVVATHGHSASGIYEE 344
EL NLVVV S EE
Sbjct: 191 ELANLVVVGGDRRKESKDIEE 253
Database: Populus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:49 PM
Number of letters in database: 203,408,664
Number of sequences in database: 369,679
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 317,389,727
Number of Sequences: 369679
Number of extensions: 4333427
Number of successful extensions: 63209
Number of sequences better than 1.0e-020: 78
length of database: 67,802,888
effective HSP length: 51
effective length of database: 48,949,259
effective search space used: 7048693296
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)