TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3115208.2.3
(672 letters)
Database: Populus_nucl_with_EST.fasta
369,679 sequences; 203,408,664 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CV275896.1|CV275896 WS0177.B21_P21 PTxD-NR-A-8 Populus t... 194 5e-049
gb|DN490449.1|DN490449 UK131TE03.3pR Populus apical shoot c... 188 3e-047
gb|CF232662.1|CF232662 PtaJXO0014B9B0903 Poplar cDNA librar... 187 8e-047
gb|CF232732.1|CF232732 PtaJXO0015B7B0703 Poplar cDNA librar... 183 1e-045
gb|CX655574.1|CX655574 PO02036F11 Poplar SC cDNA library Po... 182 3e-045
gb|CV238057.1|CV238057 WS0125.B21_C06 PT-GT-FL-A-3 Populus ... 181 4e-045
gb|CV256643.1|CV256643 WS0244.B21_G18 PTxD-ICC-N-A-14 Popul... 181 4e-045
gb|DN489317.1|DN489317 T023D01.3pR Populus shoot meristem c... 181 4e-045
gb|DT510085.1|DT510085 WS02425.BR_I20 PTxD-ICC-N-A-14 Popul... 181 4e-045
gb|DT514705.1|DT514705 WS02425.B21_I20 PTxD-ICC-N-A-14 Popu... 181 4e-045
gb|DT517583.1|DT517583 WS02434.B21_L14 PTxD-ICC-N-A-14 Popu... 181 4e-045
gb|DT516575.1|DT516575 WS02431.B21_M23 PTxD-ICC-N-A-14 Popu... 179 1e-044
gb|BU832092.1|BU832092 T029C12 Populus apical shoot cDNA li... 178 2e-044
gb|DT512199.1|DT512199 WS02418.B21_K02 PTxD-ICC-N-A-14 Popu... 178 2e-044
gb|DT520978.1|DT520978 WS02033.B21_B04 PTxN-IB-N-A-11 Popul... 178 2e-044
gb|DT525144.1|DT525144 WS02044.C21_J01 PTxN-IB-N-A-11 Popul... 178 2e-044
gb|CK092927.1|CK092927 G100P57.3pR Populus tension wood cDN... 177 9e-044
gb|BP934231.1|BP934231 BP934231 full-length enriched poplar... 174 4e-043
gb|CN523502.1|CN523502 GQ015M07.T3_B08 GQ015 Populus tricho... 171 3e-042
gb|DT476539.1|DT476539 WS01229.B21_P03 PT-GT-FL-A-3 Populus... 171 3e-042
gb|DT485142.1|DT485142 WS02527.B21_G13 PT-MB-N-A-15 Populus... 171 3e-042
gb|DT511310.1|DT511310 WS02416.B21_B23 PTxD-ICC-N-A-14 Popu... 171 3e-042
gb|DT518220.1|DT518220 WS02436.B21_I16 PTxD-ICC-N-A-14 Popu... 171 3e-042
gb|DN492283.1|DN492283 V062A01.3pR Populus male catkins cDN... 169 1e-041
gb|CV130787.1|CV130787 B9SP10h10 Populus stem seasonal libr... 168 3e-041
gb|CB240309.1|CB240309 PopSC00287 Poplar SC cDNA library Po... 163 1e-039
gb|CF233492.1|CF233492 PtaJXO0024C2C0206 Poplar cDNA librar... 162 2e-039
gb|BU831146.1|BU831146 T017G12 Populus apical shoot cDNA li... 152 2e-036
gb|DT508892.1|DT508892 WS02422.BR_D15 PTxD-ICC-N-A-14 Popul... 150 6e-036
gb|DT513501.1|DT513501 WS02422.B21_D15 PTxD-ICC-N-A-14 Popu... 149 1e-035
gb|DN483723.1|DN483723 PSO202D09 Populus tomentiglandulosa ... 136 3e-035
gb|BI131350.1|BI131350 G119P62Y Populus cambium cDNA librar... 146 2e-034
gb|CA824413.1|CA824413 R41F09 two-month-old roots from clon... 144 4e-034
gb|CV274281.1|CV274281 WS0172.B21_M11 PTxD-NR-A-8 Populus t... 144 4e-034
gb|AJ777809.1|AJ777809 AJ777809 Populus euphratica root 3-6... 143 1e-033
gb|DT518576.1|DT518576 WS02438.B21_J08 PTxD-ICC-N-A-14 Popu... 139 1e-032
gb|BU832276.1|BU832276 T031F10 Populus apical shoot cDNA li... 138 2e-032
gb|DT482101.1|DT482101 WS02533.BR_O14 PT-MB-N-A-15 Populus ... 134 6e-031
gb|DT487515.1|DT487515 WS02533.B21_O14 PT-MB-N-A-15 Populus... 134 6e-031
gb|DN484355.1|DN484355 G130P50.3pR Populus tension wood cDN... 133 8e-031
gb|AI164321.1|AI164321 A059P32U Hybrid aspen plasmid librar... 118 1e-030
gb|CA931453.1|CA931453 MTU2TA.P7.E06 Aspen apex cDNA Librar... 131 5e-030
gb|BU812401.1|BU812401 UL95TH09 Populus leaf cDNA library P... 129 2e-029
gb|CA930944.1|CA930944 MTU2TA.P12.F04 Aspen apex cDNA Libra... 127 9e-029
gb|CX655663.1|CX655663 PO02038B07 Poplar SC cDNA library Po... 127 9e-029
gb|AC149575.1| Populus trichocarpa clone Pop1-41G18, comple... 102 2e-028
gb|DN502243.1|DN502243 V062A01.5pR Populus male catkins cDN... 68 1e-027
gb|CV230926.1|CV230926 WS0193.B21_A09 PT-DX-N-A-10 Populus ... 122 3e-027
gb|AI164970.1|AI164970 A071P61U Hybrid aspen plasmid librar... 120 8e-027
gb|BI131980.1|BI131980 G128P78Y Populus cambium cDNA librar... 118 4e-026
gb|CV268506.1|CV268506 WS0205.B21_K21 PTxN-IB-N-A-11 Populu... 116 1e-025
gb|CA933814.1|CA933814 MTU3TS.P13.A11 Aspen stem cDNA Libra... 112 2e-024
gb|CX282655.1|CX282655 18-2.5.2 Populus tremula X Populus a... 112 2e-024
gb|CK103714.1|CK103714 G128P78.5pR Populus tension wood cDN... 111 3e-024
gb|BI132032.1|BI132032 G130P01Y Populus cambium cDNA librar... 111 6e-024
gb|CA927109.1|CA927109 MTU6CR.P5.A10 Aspen root cDNA Librar... 110 1e-023
gb|CV272489.1|CV272489 WS0157.B21_M22 PTxN-IB-A-6 Populus t... 108 3e-023
gb|CV232951.1|CV232951 WS0199.B21_C22 PT-DX-N-A-10 Populus ... 76 3e-021
gb|CK103730.1|CK103730 G130P01.5pR Populus tension wood cDN... 101 4e-021
gb|CX175429.1|CX175429 D03_69-77_07.ab1 leaf inoculated wit... 100 9e-021
>gb|CV275896.1|CV275896 WS0177.B21_P21 PTxD-NR-A-8 Populus trichocarpa x Populus deltoides
cDNA clone WS0177_P21 3', mRNA sequence
Length = 878
Score = 194 bits (418), Expect = 5e-049
Identities = 75/134 (55%), Positives = 96/134 (71%)
Frame = +2 / -1
Query: 20 GPLHVIPNVITAEFRTFIEIVFENPEKSIDSLHVDGYAFFGVGMGPGKWSPEVRKTYNLL 199
G ++ +V+ A+FR + EIVFENPE ++ S H+DG+ FF VGM G+WSP R +YNL
Sbjct: 728 GGAYLQTSVMAADFRGYAEIVFENPEDNVQSWHIDGHNFFVVGMDGGQWSPASRLSYNLR 549
Query: 200 DTVSRHTIQVYPRSWTAIMLTFDNAGMWSVHSNIWERYYLGEQFYISVVSPARSLRDEYN 379
DT+SR T+QVYP SWTA+ + DN GMW+V S W R YLG+QFY+ V SPA S RDEY
Sbjct: 548 DTISRCTVQVYPESWTAVYMPLDNVGMWNVRSENWARQYLGQQFYLRVYSPANSWRDEYP 369
Query: 380 MPDNALRCGKVVGL 421
+P NAL CG+ GL
Sbjct: 368 IPTNALLCGRAAGL 327
Score = 110 bits (234), Expect = 1e-023
Identities = 60/121 (49%), Positives = 71/121 (58%)
Frame = -1 / +1
Query: 405 PQRRALSGMLYSSRSDRAGETTLM*NCSPR*YRSQMLECTLHMPALSNVSMIAVHDRGYT 226
PQRRA G+ YSS + AGE T *NC P+ R+Q + T H+P LS AVHD G T
Sbjct: 343 PQRRAFVGIGYSSLHEFAGE*TRR*NCCPKYCRAQFSDLTFHIPTLSRGM*TAVHDSG*T 522
Query: 225 WIVCRLTVSSRLYVFLTSGDHFPGPIPTPKKA*PSTWRESMLFSGFSKTISMKVRNSAVM 46
V R VS +L + L +GDH P IPT KK PS ++ L SGFSKTIS SA M
Sbjct: 523 *TVQREIVSLKL*LNLLAGDHCPPSIPTTKKLCPSMCQDCTLSSGFSKTISA*PLKSAAM 702
Query: 45 T 43
T
Sbjct: 703 T 705
>gb|DN490449.1|DN490449 UK131TE03.3pR Populus apical shoot cDNA library Populus tremula x
Populus tremuloides cDNA clone UK131TE03 3', mRNA
sequence
Length = 667
Score = 188 bits (405), Expect = 3e-047
Identities = 69/134 (51%), Positives = 98/134 (73%)
Frame = +2 / -3
Query: 20 GPLHVIPNVITAEFRTFIEIVFENPEKSIDSLHVDGYAFFGVGMGPGKWSPEVRKTYNLL 199
G + +V++A F+EIVF+N EK++ S H+DGY F+ +G G G+W+ R TYNL+
Sbjct: 563 GAAFLSTSVMSANLHDFLEIVFQNDEKTMQSWHLDGYDFWVIGYGNGQWTSAKRSTYNLV 384
Query: 200 DTVSRHTIQVYPRSWTAIMLTFDNAGMWSVHSNIWERYYLGEQFYISVVSPARSLRDEYN 379
D ++RHT+QVYP SWTAI ++ DN GMW++ S IWER YLG+QFY+ V + SL +EY+
Sbjct: 383 DALTRHTVQVYPNSWTAIYVSLDNQGMWNLRSAIWERQYLGQQFYLRVWTQVHSLENEYD 204
Query: 380 MPDNALRCGKVVGL 421
+P NALRCGK +G+
Sbjct: 203 IPSNALRCGKAIGI 162
>gb|CF232662.1|CF232662 PtaJXO0014B9B0903 Poplar cDNA library from young opposite xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 675
Score = 187 bits (402), Expect = 8e-047
Identities = 68/134 (50%), Positives = 98/134 (73%)
Frame = +2 / +3
Query: 20 GPLHVIPNVITAEFRTFIEIVFENPEKSIDSLHVDGYAFFGVGMGPGKWSPEVRKTYNLL 199
G + +V++A F+E+VF+N EK++ S H+DGY F+ +G G G W+ R TYNL+
Sbjct: 87 GAAFLSTSVMSANLHDFLEVVFQNDEKTMQSWHLDGYDFWVIGYGNGLWNSAKRSTYNLV 266
Query: 200 DTVSRHTIQVYPRSWTAIMLTFDNAGMWSVHSNIWERYYLGEQFYISVVSPARSLRDEYN 379
D ++RHT+QVYP+SWTAI ++ DN GMW++ S IWER YLG+QFY+ V + SL +EY+
Sbjct: 267 DALTRHTVQVYPKSWTAIYVSLDNQGMWNMRSAIWERQYLGQQFYLRVWTQVHSLANEYD 446
Query: 380 MPDNALRCGKVVGL 421
+P NALRCGK +G+
Sbjct: 447 IPSNALRCGKAIGI 488
>gb|CF232732.1|CF232732 PtaJXO0015B7B0703 Poplar cDNA library from young opposite xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 566
Score = 183 bits (394), Expect = 1e-045
Identities = 66/123 (53%), Positives = 92/123 (74%)
Frame = +2 / +3
Query: 53 AEFRTFIEIVFENPEKSIDSLHVDGYAFFGVGMGPGKWSPEVRKTYNLLDTVSRHTIQVY 232
A F+E+VF+N EK++ S H+DGY F+ +G G G W+ R TYNL+D ++RHT+QVY
Sbjct: 3 ANLHDFLEVVFQNDEKTMQSWHLDGYDFWVIGYGNGLWNSAKRSTYNLVDALTRHTVQVY 182
Query: 233 PRSWTAIMLTFDNAGMWSVHSNIWERYYLGEQFYISVVSPARSLRDEYNMPDNALRCGKV 412
P+SWTAI ++ DN GMW++ S IWER YLG+QFY+ V + SL +EY++P NALRCGK
Sbjct: 183 PKSWTAIYVSLDNQGMWNMRSAIWERQYLGQQFYLRVWTQVHSLANEYDIPSNALRCGKA 362
Query: 413 VGL 421
+G+
Sbjct: 363 IGI 371
>gb|CX655574.1|CX655574 PO02036F11 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO02036F11 5', mRNA sequence
Length = 520
Score = 182 bits (391), Expect = 3e-045
Identities = 68/131 (51%), Positives = 92/131 (70%)
Frame = +2 / +2
Query: 26 LHVIPNVITAEFRTFIEIVFENPEKSIDSLHVDGYAFFGVGMGPGKWSPEVRKTYNLLDT 205
+++ +V+ A+FR F+EIVF+N E + S H++GY+F+ VGM G W+P R YNL D
Sbjct: 59 MYLDTSVLGADFRAFVEIVFQNHENIVQSWHINGYSFWVVGMDGGVWTPASRNQYNLRDA 238
Query: 206 VSRHTIQVYPRSWTAIMLTFDNAGMWSVHSNIWERYYLGEQFYISVVSPARSLRDEYNMP 385
VSR T QVYP+SWTAI + DN GMW++ + W R YLG+QFY+ V SP S RDEY +P
Sbjct: 239 VSRCTTQVYPKSWTAIYIALDNVGMWNIRTEFWARQYLGQQFYMRVYSPVESPRDEYPIP 418
Query: 386 DNALRCGKVVG 418
NAL CG+ +G
Sbjct: 419 KNALLCGRAIG 451
Score = 105 bits (224), Expect = 3e-022
Identities = 58/122 (47%), Positives = 68/122 (55%)
Frame = -1 / -2
Query: 408 LPQRRALSGMLYSSRSDRAGETTLM*NCSPR*YRSQMLECTLHMPALSNVSMIAVHDRGY 229
LPQRRA G+ YSSR D GE T +*NC PR +Q H+P LS+ IAVHD GY
Sbjct: 441 LPQRRAFLGIGYSSRGDSTGE*TRI*NC*PRYCLAQNSVLMFHIPTLSSAM*IAVHDLGY 262
Query: 228 TWIVCRLTVSSRLYVFLTSGDHFPGPIPTPKKA*PSTWRESMLFSGFSKTISMKVRNSAV 49
T +V R T S RLY +G H P IPT +K P + +FS F TIS K SA
Sbjct: 261 T*VVQRETASLRLY*LRLAGVHTPPSIPTTQKEYPLMCQLWTMFSWF*NTISTKALKSAP 82
Query: 48 MT 43
T
Sbjct: 81 KT 76
>gb|CV238057.1|CV238057 WS0125.B21_C06 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS0125_C06 3', mRNA sequence
Length = 697
Score = 181 bits (390), Expect = 4e-045
Identities = 71/125 (56%), Positives = 90/125 (72%)
Frame = +2 / -1
Query: 44 VITAEFRTFIEIVFENPEKSIDSLHVDGYAFFGVGMGPGKWSPEVRKTYNLLDTVSRHTI 223
V++A FR FIEIVF+N E ++ S H+DG++FF VGM G+W+P R YNL DTV+R T
Sbjct: 628 VMSANFREFIEIVFQNWEDTVQSWHIDGHSFFVVGMDGGQWTPASRARYNLRDTVARCTT 449
Query: 224 QVYPRSWTAIMLTFDNAGMWSVHSNIWERYYLGEQFYISVVSPARSLRDEYNMPDNALRC 403
QVYP+SWTAI + DN GMW++ S W R YLG+QFY+ V SPA S RDE +P NAL C
Sbjct: 448 QVYPKSWTAIYMALDNVGMWNIRSENWARQYLGQQFYLRVYSPAHSWRDELPIPKNALLC 269
Query: 404 GKVVG 418
G+ G
Sbjct: 268 GRARG 254
Score = 100 bits (213), Expect = 9e-021
Identities = 58/121 (47%), Positives = 69/121 (57%)
Frame = -1 / +3
Query: 405 PQRRALSGMLYSSRSDRAGETTLM*NCSPR*YRSQMLECTLHMPALSNVSMIAVHDRGYT 226
PQRRA G+ SS + AGE TL *NC P+ +Q + H+P LS IAVHD G T
Sbjct: 267 PQRRAFFGIGNSSLHECAGE*TLR*NC*PKYCLAQFSDLMFHIPTLSKAM*IAVHDLG*T 446
Query: 225 WIVCRLTVSSRLYVFLTSGDHFPGPIPTPKKA*PSTWRESMLFSGFSKTISMKVRNSAVM 46
+V R TVS +L L +G H P IPT KK *PS + + S F KTISM R A M
Sbjct: 447 *VVQRATVSLKL*RALLAGVHCPPSIPTTKKE*PSMCHD*TVSSQFWKTISMNSRKLADM 626
Query: 45 T 43
T
Sbjct: 627 T 629
>gb|CV256643.1|CV256643 WS0244.B21_G18 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS0244_G18 3', mRNA sequence
Length = 860
Score = 181 bits (390), Expect = 4e-045
Identities = 68/131 (51%), Positives = 92/131 (70%)
Frame = +2 / -1
Query: 26 LHVIPNVITAEFRTFIEIVFENPEKSIDSLHVDGYAFFGVGMGPGKWSPEVRKTYNLLDT 205
+++ +V+ A+FR F+EIVF+N E + S H++GY+F+ VGM G W+P R YNL D
Sbjct: 599 MYLDTSVMGADFRAFVEIVFQNHENIVQSWHINGYSFWVVGMDGGVWTPASRNQYNLRDA 420
Query: 206 VSRHTIQVYPRSWTAIMLTFDNAGMWSVHSNIWERYYLGEQFYISVVSPARSLRDEYNMP 385
VSR T QVYP+SWTAI + DN GMW++ + W R YLG+QFY+ V SP S RDEY +P
Sbjct: 419 VSRCTTQVYPKSWTAIYIALDNVGMWNIRTEFWARQYLGQQFYMRVYSPVESPRDEYPIP 240
Query: 386 DNALRCGKVVG 418
NAL CG+ +G
Sbjct: 239 KNALLCGRAIG 207
Score = 108 bits (230), Expect = 4e-023
Identities = 59/122 (48%), Positives = 69/122 (56%)
Frame = -1 / +1
Query: 408 LPQRRALSGMLYSSRSDRAGETTLM*NCSPR*YRSQMLECTLHMPALSNVSMIAVHDRGY 229
LPQRRA G+ YSSR D GE T +*NC PR +Q H+P LS+ IAVHD GY
Sbjct: 217 LPQRRAFLGIGYSSRGDSTGE*TRI*NC*PRYCLAQNSVLMFHIPTLSSAM*IAVHDLGY 396
Query: 228 TWIVCRLTVSSRLYVFLTSGDHFPGPIPTPKKA*PSTWRESMLFSGFSKTISMKVRNSAV 49
T +V R T S RLY +G H P IPT +K P + +FS F TIS K SA
Sbjct: 397 T*VVQRETASLRLY*LRLAGVHTPPSIPTTQKEYPLMCQLWTMFSWF*NTISTKALKSAP 576
Query: 48 MT 43
MT
Sbjct: 577 MT 582
>gb|DN489317.1|DN489317 T023D01.3pR Populus shoot meristem cDNA library Populus tremula x
Populus tremuloides cDNA clone T023D01 3', mRNA sequence
Length = 745
Score = 181 bits (390), Expect = 4e-045
Identities = 71/125 (56%), Positives = 90/125 (72%)
Frame = +2 / -3
Query: 44 VITAEFRTFIEIVFENPEKSIDSLHVDGYAFFGVGMGPGKWSPEVRKTYNLLDTVSRHTI 223
V++A FR FIEIVF+N E ++ S H+DG++FF VGM G+W+P R YNL DTV+R T
Sbjct: 509 VMSANFREFIEIVFQNWEDTVQSWHIDGHSFFVVGMDGGQWTPASRARYNLRDTVARCTT 330
Query: 224 QVYPRSWTAIMLTFDNAGMWSVHSNIWERYYLGEQFYISVVSPARSLRDEYNMPDNALRC 403
QVYP+SWTAI + DN GMW++ S W R YLG+QFY+ V SPA S RDE +P NAL C
Sbjct: 329 QVYPKSWTAIYMALDNVGMWNIRSENWARQYLGQQFYLRVYSPAHSWRDELPIPKNALLC 150
Query: 404 GKVVG 418
G+ G
Sbjct: 149 GRARG 135
Score = 100 bits (213), Expect = 9e-021
Identities = 58/121 (47%), Positives = 69/121 (57%)
Frame = -1 / +1
Query: 405 PQRRALSGMLYSSRSDRAGETTLM*NCSPR*YRSQMLECTLHMPALSNVSMIAVHDRGYT 226
PQRRA G+ SS + AGE TL *NC P+ +Q + H+P LS IAVHD G T
Sbjct: 148 PQRRAFFGIGNSSLHECAGE*TLR*NC*PKYCLAQFSDLMFHIPTLSKAM*IAVHDLG*T 327
Query: 225 WIVCRLTVSSRLYVFLTSGDHFPGPIPTPKKA*PSTWRESMLFSGFSKTISMKVRNSAVM 46
+V R TVS +L L +G H P IPT KK *PS + + S F KTISM R A M
Sbjct: 328 *VVQRATVSLKL*RALLAGVHCPPSIPTTKKE*PSMCHD*TVSSQFWKTISMNSRKLADM 507
Query: 45 T 43
T
Sbjct: 508 T 510
>gb|DT510085.1|DT510085 WS02425.BR_I20 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02425_I20 5', mRNA sequence
Length = 837
Score = 181 bits (390), Expect = 4e-045
Identities = 68/131 (51%), Positives = 92/131 (70%)
Frame = +2 / +3
Query: 26 LHVIPNVITAEFRTFIEIVFENPEKSIDSLHVDGYAFFGVGMGPGKWSPEVRKTYNLLDT 205
+++ +V+ A+FR F+EIVF+N E + S H++GY+F+ VGM G W+P R YNL D
Sbjct: 267 MYLDTSVMGADFRAFVEIVFQNHENIVQSWHINGYSFWVVGMDGGVWTPASRNQYNLRDA 446
Query: 206 VSRHTIQVYPRSWTAIMLTFDNAGMWSVHSNIWERYYLGEQFYISVVSPARSLRDEYNMP 385
VSR T QVYP+SWTAI + DN GMW++ + W R YLG+QFY+ V SP S RDEY +P
Sbjct: 447 VSRCTTQVYPKSWTAIYIALDNVGMWNIRTEFWARQYLGQQFYMRVYSPVESPRDEYPIP 626
Query: 386 DNALRCGKVVG 418
NAL CG+ +G
Sbjct: 627 KNALLCGRAIG 659
Score = 108 bits (230), Expect = 4e-023
Identities = 59/122 (48%), Positives = 69/122 (56%)
Frame = -1 / -3
Query: 408 LPQRRALSGMLYSSRSDRAGETTLM*NCSPR*YRSQMLECTLHMPALSNVSMIAVHDRGY 229
LPQRRA G+ YSSR D GE T +*NC PR +Q H+P LS+ IAVHD GY
Sbjct: 649 LPQRRAFLGIGYSSRGDSTGE*TRI*NC*PRYCLAQNSVLMFHIPTLSSAM*IAVHDLGY 470
Query: 228 TWIVCRLTVSSRLYVFLTSGDHFPGPIPTPKKA*PSTWRESMLFSGFSKTISMKVRNSAV 49
T +V R T S RLY +G H P IPT +K P + +FS F TIS K SA
Sbjct: 469 T*VVQRETASLRLY*LRLAGVHTPPSIPTTQKEYPLMCQLWTMFSWF*NTISTKALKSAP 290
Query: 48 MT 43
MT
Sbjct: 289 MT 284
>gb|DT514705.1|DT514705 WS02425.B21_I20 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02425_I20 3', mRNA sequence
Length = 853
Score = 181 bits (390), Expect = 4e-045
Identities = 68/131 (51%), Positives = 92/131 (70%)
Frame = +2 / -3
Query: 26 LHVIPNVITAEFRTFIEIVFENPEKSIDSLHVDGYAFFGVGMGPGKWSPEVRKTYNLLDT 205
+++ +V+ A+FR F+EIVF+N E + S H++GY+F+ VGM G W+P R YNL D
Sbjct: 587 MYLDTSVMGADFRAFVEIVFQNHENIVQSWHINGYSFWVVGMDGGVWTPASRNQYNLRDA 408
Query: 206 VSRHTIQVYPRSWTAIMLTFDNAGMWSVHSNIWERYYLGEQFYISVVSPARSLRDEYNMP 385
VSR T QVYP+SWTAI + DN GMW++ + W R YLG+QFY+ V SP S RDEY +P
Sbjct: 407 VSRCTTQVYPKSWTAIYIALDNVGMWNIRTEFWARQYLGQQFYMRVYSPVESPRDEYPIP 228
Query: 386 DNALRCGKVVG 418
NAL CG+ +G
Sbjct: 227 KNALLCGRAIG 195
Score = 108 bits (230), Expect = 4e-023
Identities = 59/122 (48%), Positives = 69/122 (56%)
Frame = -1 / +1
Query: 408 LPQRRALSGMLYSSRSDRAGETTLM*NCSPR*YRSQMLECTLHMPALSNVSMIAVHDRGY 229
LPQRRA G+ YSSR D GE T +*NC PR +Q H+P LS+ IAVHD GY
Sbjct: 205 LPQRRAFLGIGYSSRGDSTGE*TRI*NC*PRYCLAQNSVLMFHIPTLSSAM*IAVHDLGY 384
Query: 228 TWIVCRLTVSSRLYVFLTSGDHFPGPIPTPKKA*PSTWRESMLFSGFSKTISMKVRNSAV 49
T +V R T S RLY +G H P IPT +K P + +FS F TIS K SA
Sbjct: 385 T*VVQRETASLRLY*LRLAGVHTPPSIPTTQKEYPLMCQLWTMFSWF*NTISTKALKSAP 564
Query: 48 MT 43
MT
Sbjct: 565 MT 570
>gb|DT517583.1|DT517583 WS02434.B21_L14 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02434_L14 3', mRNA sequence
Length = 829
Score = 181 bits (390), Expect = 4e-045
Identities = 68/131 (51%), Positives = 92/131 (70%)
Frame = +2 / -2
Query: 26 LHVIPNVITAEFRTFIEIVFENPEKSIDSLHVDGYAFFGVGMGPGKWSPEVRKTYNLLDT 205
+++ +V+ A+FR F+EIVF+N E + S H++GY+F+ VGM G W+P R YNL D
Sbjct: 594 MYLDTSVMGADFRAFVEIVFQNHENIVQSWHINGYSFWVVGMDGGVWTPASRNQYNLRDA 415
Query: 206 VSRHTIQVYPRSWTAIMLTFDNAGMWSVHSNIWERYYLGEQFYISVVSPARSLRDEYNMP 385
VSR T QVYP+SWTAI + DN GMW++ + W R YLG+QFY+ V SP S RDEY +P
Sbjct: 414 VSRCTTQVYPKSWTAIYIALDNVGMWNIRTEFWARQYLGQQFYMRVYSPVESPRDEYPIP 235
Query: 386 DNALRCGKVVG 418
NAL CG+ +G
Sbjct: 234 KNALLCGRAIG 202
Score = 108 bits (230), Expect = 4e-023
Identities = 59/122 (48%), Positives = 69/122 (56%)
Frame = -1 / +2
Query: 408 LPQRRALSGMLYSSRSDRAGETTLM*NCSPR*YRSQMLECTLHMPALSNVSMIAVHDRGY 229
LPQRRA G+ YSSR D GE T +*NC PR +Q H+P LS+ IAVHD GY
Sbjct: 212 LPQRRAFLGIGYSSRGDSTGE*TRI*NC*PRYCLAQNSVLMFHIPTLSSAM*IAVHDLGY 391
Query: 228 TWIVCRLTVSSRLYVFLTSGDHFPGPIPTPKKA*PSTWRESMLFSGFSKTISMKVRNSAV 49
T +V R T S RLY +G H P IPT +K P + +FS F TIS K SA
Sbjct: 392 T*VVQRETASLRLY*LRLAGVHTPPSIPTTQKEYPLMCQLWTMFSWF*NTISTKALKSAP 571
Query: 48 MT 43
MT
Sbjct: 572 MT 577
>gb|DT516575.1|DT516575 WS02431.B21_M23 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02431_M23 3', mRNA sequence
Length = 712
Score = 179 bits (386), Expect = 1e-044
Identities = 71/125 (56%), Positives = 90/125 (72%)
Frame = +2 / -3
Query: 44 VITAEFRTFIEIVFENPEKSIDSLHVDGYAFFGVGMGPGKWSPEVRKTYNLLDTVSRHTI 223
V++A FR FIEIVF+N E ++ S H+DG++FF VGM G+W+ R YNL DTV+R T
Sbjct: 629 VMSANFREFIEIVFQNWEDTVQSWHIDGHSFFVVGMDGGQWTTASRARYNLRDTVARCTT 450
Query: 224 QVYPRSWTAIMLTFDNAGMWSVHSNIWERYYLGEQFYISVVSPARSLRDEYNMPDNALRC 403
QVYP+SWTAI + DN GMW++ S W R YLG+QFY+ V SPA S RDE +P NAL C
Sbjct: 449 QVYPKSWTAIYMALDNVGMWNIRSENWARQYLGQQFYLRVYSPAHSWRDELPIPKNALLC 270
Query: 404 GKVVG 418
G+V G
Sbjct: 269 GRVRG 255
>gb|BU832092.1|BU832092 T029C12 Populus apical shoot cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 780
Score = 178 bits (384), Expect = 2e-044
Identities = 69/133 (51%), Positives = 93/133 (69%)
Frame = +2 / +1
Query: 20 GPLHVIPNVITAEFRTFIEIVFENPEKSIDSLHVDGYAFFGVGMGPGKWSPEVRKTYNLL 199
G L++ +V+T +R F+EIVF+N E + S H+DGY+FF VGM G+W+ R YNL
Sbjct: 115 GGLYLDTSVLTLPYRAFVEIVFQNNEDIVQSWHLDGYSFFVVGMDGGQWTTASRNQYNLR 294
Query: 200 DTVSRHTIQVYPRSWTAIMLTFDNAGMWSVHSNIWERYYLGEQFYISVVSPARSLRDEYN 379
D VSR TIQVYP++WTAI + DN GMW++ + W R YLG+QFY+ V + + SLRDEY
Sbjct: 295 DGVSRCTIQVYPKAWTAIYIPLDNVGMWNLRTEFWARQYLGQQFYLRVYTDSTSLRDEYP 474
Query: 380 MPDNALRCGKVVG 418
+P NAL CG+ G
Sbjct: 475 IPKNALLCGRASG 513
>gb|DT512199.1|DT512199 WS02418.B21_K02 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02418_K02 3', mRNA sequence
Length = 927
Score = 178 bits (384), Expect = 2e-044
Identities = 69/133 (51%), Positives = 93/133 (69%)
Frame = +2 / -3
Query: 20 GPLHVIPNVITAEFRTFIEIVFENPEKSIDSLHVDGYAFFGVGMGPGKWSPEVRKTYNLL 199
G L++ +V+T +R F+EIVF+N E + S H+DGY+FF VGM G+W+ R YNL
Sbjct: 784 GGLYLDTSVLTLPYRAFVEIVFQNNEDIVQSWHLDGYSFFVVGMDGGQWTTASRNQYNLR 605
Query: 200 DTVSRHTIQVYPRSWTAIMLTFDNAGMWSVHSNIWERYYLGEQFYISVVSPARSLRDEYN 379
D VSR TIQVYP++WTAI + DN GMW++ + W R YLG+QFY+ V + + SLRDEY
Sbjct: 604 DGVSRCTIQVYPKAWTAIYIPLDNVGMWNLRTEFWARQYLGQQFYLRVYTDSTSLRDEYP 425
Query: 380 MPDNALRCGKVVG 418
+P NAL CG+ G
Sbjct: 424 IPKNALLCGRASG 386
>gb|DT520978.1|DT520978 WS02033.B21_B04 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02033_B04 3', mRNA sequence
Length = 868
Score = 178 bits (384), Expect = 2e-044
Identities = 69/133 (51%), Positives = 93/133 (69%)
Frame = +2 / -2
Query: 20 GPLHVIPNVITAEFRTFIEIVFENPEKSIDSLHVDGYAFFGVGMGPGKWSPEVRKTYNLL 199
G L++ +V+T +R F+EIVF+N E + S H+DGY+FF VGM G+W+ R YNL
Sbjct: 627 GGLYLDTSVLTLPYRAFVEIVFQNNEDIVQSWHLDGYSFFVVGMDGGQWTTASRNQYNLR 448
Query: 200 DTVSRHTIQVYPRSWTAIMLTFDNAGMWSVHSNIWERYYLGEQFYISVVSPARSLRDEYN 379
D VSR TIQVYP++WTAI + DN GMW++ + W R YLG+QFY+ V + + SLRDEY
Sbjct: 447 DGVSRCTIQVYPKAWTAIYIPLDNVGMWNLRTEFWARQYLGQQFYLRVYTDSTSLRDEYP 268
Query: 380 MPDNALRCGKVVG 418
+P NAL CG+ G
Sbjct: 267 IPKNALLCGRASG 229
>gb|DT525144.1|DT525144 WS02044.C21_J01 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02044_J01 3', mRNA sequence
Length = 868
Score = 178 bits (384), Expect = 2e-044
Identities = 69/133 (51%), Positives = 93/133 (69%)
Frame = +2 / -2
Query: 20 GPLHVIPNVITAEFRTFIEIVFENPEKSIDSLHVDGYAFFGVGMGPGKWSPEVRKTYNLL 199
G L++ +V+T +R F+EIVF+N E + S H+DGY+FF VGM G+W+ R YNL
Sbjct: 627 GGLYLDTSVLTLPYRAFVEIVFQNNEDIVQSWHLDGYSFFVVGMDGGQWTTASRNQYNLR 448
Query: 200 DTVSRHTIQVYPRSWTAIMLTFDNAGMWSVHSNIWERYYLGEQFYISVVSPARSLRDEYN 379
D VSR TIQVYP++WTAI + DN GMW++ + W R YLG+QFY+ V + + SLRDEY
Sbjct: 447 DGVSRCTIQVYPKAWTAIYIPLDNVGMWNLRTEFWARQYLGQQFYLRVYTDSTSLRDEYP 268
Query: 380 MPDNALRCGKVVG 418
+P NAL CG+ G
Sbjct: 267 IPKNALLCGRASG 229
>gb|CK092927.1|CK092927 G100P57.3pR Populus tension wood cDNA library Populus tremula x
Populus tremuloides cDNA clone G100P57 3', mRNA sequence
Length = 826
Score = 177 bits (380), Expect = 9e-044
Identities = 68/131 (51%), Positives = 92/131 (70%)
Frame = +2 / -1
Query: 26 LHVIPNVITAEFRTFIEIVFENPEKSIDSLHVDGYAFFGVGMGPGKWSPEVRKTYNLLDT 205
L++ +V+T +R F+EIVF+N E + S H+DGY+FF VGM G+W+ R YNL D
Sbjct: 778 LYLDTSVLTLPYRAFVEIVFQNNEDIVQSWHLDGYSFFVVGMDGGQWTTASRNQYNLRDG 599
Query: 206 VSRHTIQVYPRSWTAIMLTFDNAGMWSVHSNIWERYYLGEQFYISVVSPARSLRDEYNMP 385
VSR TIQVYP++WTAI + DN GMW++ + W R YLG+QFY+ V + + SLRDEY +P
Sbjct: 598 VSRCTIQVYPKAWTAIYIPLDNVGMWNLRTEFWARQYLGQQFYLRVYTDSTSLRDEYPIP 419
Query: 386 DNALRCGKVVG 418
NAL CG+ G
Sbjct: 418 KNALLCGRASG 386
>gb|BP934231.1|BP934231 BP934231 full-length enriched poplar cDNA library Populus nigra
cDNA clone PnFL1-062_A03.r 3', mRNA sequence
Length = 706
Score = 174 bits (375), Expect = 4e-043
Identities = 67/126 (53%), Positives = 88/126 (69%)
Frame = +2 / -3
Query: 41 NVITAEFRTFIEIVFENPEKSIDSLHVDGYAFFGVGMGPGKWSPEVRKTYNLLDTVSRHT 220
+V+T +R F+EIVF N E + S H+DGY+FF VGM G+W+ R YNL D VSR T
Sbjct: 701 SVLTLPYRAFVEIVFRNNEDIVQSWHLDGYSFFVVGMDGGQWTTASRNQYNLRDGVSRCT 522
Query: 221 IQVYPRSWTAIMLTFDNAGMWSVHSNIWERYYLGEQFYISVVSPARSLRDEYNMPDNALR 400
IQVYP++WTAI + DN GMW++ + W R YLG+QFY+ V + + SLRDEY +P NAL
Sbjct: 521 IQVYPKAWTAIYIPLDNVGMWNLRTEFWARQYLGQQFYLRVYTDSTSLRDEYPIPKNALL 342
Query: 401 CGKVVG 418
CG+ G
Sbjct: 341 CGRASG 324
>gb|CN523502.1|CN523502 GQ015M07.T3_B08 GQ015 Populus trichocarpa x Populus deltoides cDNA
clone GQ015M07_B08 5', mRNA sequence
Length = 777
Score = 171 bits (369), Expect = 3e-042
Identities = 68/143 (47%), Positives = 94/143 (65%)
Frame = +2 / +3
Query: 20 GPLHVIPNVITAEFRTFIEIVFENPEKSIDSLHVDGYAFFGVGMGPGKWSPEVRKTYNLL 199
G L++ V+T +R ++EIVF+N E + S H+DGY+FF VGM G+W+ R YNL
Sbjct: 222 GGLYLDTAVLTVPYRAYVEIVFQNDEDILQSWHLDGYSFFVVGMDGGQWTTASRDQYNLR 401
Query: 200 DTVSRHTIQVYPRSWTAIMLTFDNAGMWSVHSNIWERYYLGEQFYISVVSPARSLRDEYN 379
D V+R T QVYP++WTAI + DN GMW++ + W R YLG+QFY+ V + + SLRDE+
Sbjct: 402 DAVARCTTQVYPKAWTAIYIPLDNVGMWNLRTEFWARQYLGQQFYLRVYTDSTSLRDEFP 581
Query: 380 MPDNALRCGKVVGLPLPPSYAPA 448
+P NAL CG+ G P A A
Sbjct: 582 IPKNALLCGRASGRRTRPL*ASA 650
>gb|DT476539.1|DT476539 WS01229.B21_P03 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01229_P03 3', mRNA sequence
Length = 869
Score = 171 bits (369), Expect = 3e-042
Identities = 68/143 (47%), Positives = 94/143 (65%)
Frame = +2 / -1
Query: 20 GPLHVIPNVITAEFRTFIEIVFENPEKSIDSLHVDGYAFFGVGMGPGKWSPEVRKTYNLL 199
G L++ V+T +R ++EIVF+N E + S H+DGY+FF VGM G+W+ R YNL
Sbjct: 773 GGLYLDTAVLTVPYRAYVEIVFQNDEDILQSWHLDGYSFFVVGMDGGQWTTASRDQYNLR 594
Query: 200 DTVSRHTIQVYPRSWTAIMLTFDNAGMWSVHSNIWERYYLGEQFYISVVSPARSLRDEYN 379
D V+R T QVYP++WTAI + DN GMW++ + W R YLG+QFY+ V + + SLRDE+
Sbjct: 593 DAVARCTTQVYPKAWTAIYIPLDNVGMWNLRTEFWARQYLGQQFYLRVYTDSTSLRDEFP 414
Query: 380 MPDNALRCGKVVGLPLPPSYAPA 448
+P NAL CG+ G P A A
Sbjct: 413 IPKNALLCGRASGRRTRPL*ASA 345
>gb|DT485142.1|DT485142 WS02527.B21_G13 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02527_G13 3', mRNA sequence
Length = 904
Score = 171 bits (369), Expect = 3e-042
Identities = 68/143 (47%), Positives = 94/143 (65%)
Frame = +2 / -2
Query: 20 GPLHVIPNVITAEFRTFIEIVFENPEKSIDSLHVDGYAFFGVGMGPGKWSPEVRKTYNLL 199
G L++ V+T +R ++EIVF+N E + S H+DGY+FF VGM G+W+ R YNL
Sbjct: 768 GGLYLDTAVLTVPYRAYVEIVFQNDEDILQSWHLDGYSFFVVGMDGGQWTTASRDQYNLR 589
Query: 200 DTVSRHTIQVYPRSWTAIMLTFDNAGMWSVHSNIWERYYLGEQFYISVVSPARSLRDEYN 379
D V+R T QVYP++WTAI + DN GMW++ + W R YLG+QFY+ V + + SLRDE+
Sbjct: 588 DAVARCTTQVYPKAWTAIYIPLDNVGMWNLRTEFWARQYLGQQFYLRVYTDSTSLRDEFP 409
Query: 380 MPDNALRCGKVVGLPLPPSYAPA 448
+P NAL CG+ G P A A
Sbjct: 408 IPKNALLCGRASGRRTRPL*ASA 340
>gb|DT511310.1|DT511310 WS02416.B21_B23 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02416_B23 3', mRNA sequence
Length = 914
Score = 171 bits (369), Expect = 3e-042
Identities = 68/143 (47%), Positives = 94/143 (65%)
Frame = +2 / -2
Query: 20 GPLHVIPNVITAEFRTFIEIVFENPEKSIDSLHVDGYAFFGVGMGPGKWSPEVRKTYNLL 199
G L++ V+T +R ++EIVF+N E + S H+DGY+FF VGM G+W+ R YNL
Sbjct: 748 GGLYLDTAVLTVPYRAYVEIVFQNDEDILQSWHLDGYSFFVVGMDGGQWTTASRDQYNLR 569
Query: 200 DTVSRHTIQVYPRSWTAIMLTFDNAGMWSVHSNIWERYYLGEQFYISVVSPARSLRDEYN 379
D V+R T QVYP++WTAI + DN GMW++ + W R YLG+QFY+ V + + SLRDE+
Sbjct: 568 DAVARCTTQVYPKAWTAIYIPLDNVGMWNLRTEFWARQYLGQQFYLRVYTDSTSLRDEFP 389
Query: 380 MPDNALRCGKVVGLPLPPSYAPA 448
+P NAL CG+ G P A A
Sbjct: 388 IPKNALLCGRASGRRTRPL*ASA 320
>gb|DT518220.1|DT518220 WS02436.B21_I16 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02436_I16 3', mRNA sequence
Length = 915
Score = 171 bits (369), Expect = 3e-042
Identities = 68/143 (47%), Positives = 94/143 (65%)
Frame = +2 / -3
Query: 20 GPLHVIPNVITAEFRTFIEIVFENPEKSIDSLHVDGYAFFGVGMGPGKWSPEVRKTYNLL 199
G L++ V+T +R ++EIVF+N E + S H+DGY+FF VGM G+W+ R YNL
Sbjct: 748 GGLYLDTAVLTVPYRAYVEIVFQNDEDILQSWHLDGYSFFVVGMDGGQWTTASRDQYNLR 569
Query: 200 DTVSRHTIQVYPRSWTAIMLTFDNAGMWSVHSNIWERYYLGEQFYISVVSPARSLRDEYN 379
D V+R T QVYP++WTAI + DN GMW++ + W R YLG+QFY+ V + + SLRDE+
Sbjct: 568 DAVARCTTQVYPKAWTAIYIPLDNVGMWNLRTEFWARQYLGQQFYLRVYTDSTSLRDEFP 389
Query: 380 MPDNALRCGKVVGLPLPPSYAPA 448
+P NAL CG+ G P A A
Sbjct: 388 IPKNALLCGRASGRRTRPL*ASA 320
>gb|DN492283.1|DN492283 V062A01.3pR Populus male catkins cDNA library Populus trichocarpa
cDNA clone V062A01 3', mRNA sequence
Length = 750
Score = 169 bits (364), Expect = 1e-041
Identities = 66/135 (48%), Positives = 90/135 (66%)
Frame = +2 / -2
Query: 44 VITAEFRTFIEIVFENPEKSIDSLHVDGYAFFGVGMGPGKWSPEVRKTYNLLDTVSRHTI 223
V+T +R ++EIVF+N E + S H+DGY+FF VGM G+W+ R YNL D V+R T
Sbjct: 740 VLTVPYRAYVEIVFQNDEDILQSWHLDGYSFFVVGMDGGQWTTASRDQYNLRDAVARCTT 561
Query: 224 QVYPRSWTAIMLTFDNAGMWSVHSNIWERYYLGEQFYISVVSPARSLRDEYNMPDNALRC 403
QVYP++WTAI + DN GMW++ + W R YLG+QFY+ V + + SLRDE+ +P NAL C
Sbjct: 560 QVYPKAWTAIYIPLDNVGMWNLRTEFWARQYLGQQFYLRVYTDSTSLRDEFPIPKNALLC 381
Query: 404 GKVVGLPLPPSYAPA 448
G+ G P A A
Sbjct: 380 GRASGRRTRPL*ASA 336
>gb|CV130787.1|CV130787 B9SP10h10 Populus stem seasonal library Populus deltoides cDNA,
mRNA sequence
Length = 720
Score = 168 bits (362), Expect = 3e-041
Identities = 64/110 (58%), Positives = 79/110 (71%)
Frame = +2 / +1
Query: 92 PEKSIDSLHVDGYAFFGVGMGPGKWSPEVRKTYNLLDTVSRHTIQVYPRSWTAIMLTFDN 271
PE ++ S H+DG+ FF VGM G+WSP R +YNL DT+SR T+QVYP SWTA+ + DN
Sbjct: 37 PEDNVQSWHIDGHNFFVVGMDGGQWSPASRLSYNLRDTISRCTVQVYPESWTAVYMPLDN 216
Query: 272 AGMWSVHSNIWERYYLGEQFYISVVSPARSLRDEYNMPDNALRCGKVVGL 421
GMW+V S W R YLG+QFY+ V SPA S RDEY +P NAL CG+ GL
Sbjct: 217 VGMWNVRSENWARQYLGQQFYLRVYSPANSWRDEYPIPTNALLCGQAAGL 366
>gb|CB240309.1|CB240309 PopSC00287 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PopSC00287, mRNA sequence
Length = 473
Score = 163 bits (350), Expect = 1e-039
Identities = 63/115 (54%), Positives = 81/115 (70%)
Frame = +2 / +2
Query: 74 EIVFENPEKSIDSLHVDGYAFFGVGMGPGKWSPEVRKTYNLLDTVSRHTIQVYPRSWTAI 253
EIVF+N E + S H+DGY+FF VGM G+W+ R YNL D VSR TIQVYP++WTAI
Sbjct: 2 EIVFQNNEDIVQSWHLDGYSFFVVGMDGGQWTTASRNQYNLRDGVSRCTIQVYPKAWTAI 181
Query: 254 MLTFDNAGMWSVHSNIWERYYLGEQFYISVVSPARSLRDEYNMPDNALRCGKVVG 418
+ DN GMW++ + W R YLG+QFY+ V + + SLRDEY +P NAL CG+ G
Sbjct: 182 YIPLDNVGMWNLRTEFWARQYLGQQFYLRVYTDSTSLRDEYPIPKNALLCGRASG 346
>gb|CF233492.1|CF233492 PtaJXO0024C2C0206 Poplar cDNA library from young opposite xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 757
Score = 162 bits (348), Expect = 2e-039
Identities = 61/117 (52%), Positives = 82/117 (70%)
Frame = +2 / +2
Query: 26 LHVIPNVITAEFRTFIEIVFENPEKSIDSLHVDGYAFFGVGMGPGKWSPEVRKTYNLLDT 205
+++ +V+ A+FR F+EIVF+N E + S H++GY+F+ VGM G W+P R YNL D
Sbjct: 194 MYLDTSVLGADFRAFVEIVFQNHENIVQSWHINGYSFWVVGMDGGVWTPASRNQYNLRDA 373
Query: 206 VSRHTIQVYPRSWTAIMLTFDNAGMWSVHSNIWERYYLGEQFYISVVSPARSLRDEY 376
VSR T QVYP+SWTAI + DN GMW++ + W R YLG+QFY+ V SP S RDEY
Sbjct: 374 VSRCTTQVYPKSWTAIYIALDNVGMWNIRTEFWARQYLGQQFYMRVYSPVESPRDEY 544
>gb|BU831146.1|BU831146 T017G12 Populus apical shoot cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 695
Score = 152 bits (326), Expect = 2e-036
Identities = 58/112 (51%), Positives = 76/112 (67%)
Frame = +2 / +3
Query: 83 FENPEKSIDSLHVDGYAFFGVGMGPGKWSPEVRKTYNLLDTVSRHTIQVYPRSWTAIMLT 262
+ E + S H+DGY+FF VGM G+W+ R YNL D VSR TIQVYP++WTAI +
Sbjct: 3 YSKHEDIVQSWHLDGYSFFVVGMDGGQWTTASRNQYNLRDGVSRCTIQVYPKAWTAIYIP 182
Query: 263 FDNAGMWSVHSNIWERYYLGEQFYISVVSPARSLRDEYNMPDNALRCGKVVG 418
DN GMW++ + W R YLG+QFY+ V + + SLRDEY +P NAL CG+ G
Sbjct: 183 LDNVGMWNLRTEFWARQYLGQQFYLRVYTDSTSLRDEYPIPKNALLCGRASG 338
>gb|DT508892.1|DT508892 WS02422.BR_D15 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02422_D15 5', mRNA sequence
Length = 506
Score = 150 bits (323), Expect = 6e-036
Identities = 56/109 (51%), Positives = 77/109 (70%)
Frame = +2 / +1
Query: 26 LHVIPNVITAEFRTFIEIVFENPEKSIDSLHVDGYAFFGVGMGPGKWSPEVRKTYNLLDT 205
+++ +V+ A+FR F+EIVF+N E + S H++GY+F+ VGM G W+P R YNL D
Sbjct: 172 MYLDTSVMGADFRAFVEIVFQNHENIVQSWHINGYSFWVVGMDGGVWTPASRNQYNLRDA 351
Query: 206 VSRHTIQVYPRSWTAIMLTFDNAGMWSVHSNIWERYYLGEQFYISVVSP 352
VSR T QVYP+SWTAI + DN GMW++ + W R YLG+QFY+ V SP
Sbjct: 352 VSRCTTQVYPKSWTAIYIALDNVGMWNIRTEFWARQYLGQQFYMRVYSP 498
>gb|DT513501.1|DT513501 WS02422.B21_D15 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02422_D15 3', mRNA sequence
Length = 507
Score = 149 bits (321), Expect = 1e-035
Identities = 56/108 (51%), Positives = 77/108 (71%)
Frame = +2 / -1
Query: 26 LHVIPNVITAEFRTFIEIVFENPEKSIDSLHVDGYAFFGVGMGPGKWSPEVRKTYNLLDT 205
+++ +V+ A+FR F+EIVF+N E + S H++GY+F+ VGM G W+P R YNL D
Sbjct: 336 MYLDTSVMGADFRAFVEIVFQNHENIVQSWHINGYSFWVVGMDGGVWTPASRNQYNLRDA 157
Query: 206 VSRHTIQVYPRSWTAIMLTFDNAGMWSVHSNIWERYYLGEQFYISVVS 349
VSR T QVYP+SWTAI + DN GMW++ + W R YLG+QFY+SV S
Sbjct: 156 VSRCTTQVYPKSWTAIYIALDNVGMWNIRTEFWARQYLGQQFYMSVYS 13
>gb|DN483723.1|DN483723 PSO202D09 Populus tomentiglandulosa T. Lee cDNA library Populus
tomentiglandulosa cDNA, mRNA sequence
Length = 1202
Score = 136 bits (292), Expect(2) = 3e-035
Identities = 53/104 (50%), Positives = 69/104 (66%)
Frame = +2 / +2
Query: 20 GPLHVIPNVITAEFRTFIEIVFENPEKSIDSLHVDGYAFFGVGMGPGKWSPEVRKTYNLL 199
G L++ +V+T +R F+EIVF+N E + S H+DGY FF VGM G+W+ R YNL
Sbjct: 530 GGLYLDTSVLTLPYRAFVEIVFQNNEDIVQSWHLDGYCFFVVGMDGGQWTTASRNQYNLR 709
Query: 200 DTVSRHTIQVYPRSWTAIMLTFDNAGMWSVHSNIWERYYLGEQF 331
D VSR TIQVYP+ WTAI + DN GMW++ + W R YLG F
Sbjct: 710 DGVSRCTIQVYPKXWTAIYIPLDNVGMWNLXTEFWARQYLGXXF 841
Score = 31.8 bits (63), Expect(2) = 3e-035
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +2 / +1
Query: 332 YISVVSPARSLRDEYNMPDNALRCGKVVG 418
Y+ V + + SLRDEY +P AL G+ G
Sbjct: 841 YLRVYTDSTSLRDEYPIPKXALLXGRAXG 927
>gb|BI131350.1|BI131350 G119P62Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 389
Score = 146 bits (313), Expect = 2e-034
Identities = 55/105 (52%), Positives = 72/105 (68%)
Frame = +2 / +1
Query: 104 IDSLHVDGYAFFGVGMGPGKWSPEVRKTYNLLDTVSRHTIQVYPRSWTAIMLTFDNAGMW 283
+ S H+DGY+FF VGM G+W+ R YNL D V+R T QVYP +WTAI + DN GMW
Sbjct: 7 LQSWHLDGYSFFVVGMDGGQWTTASRDQYNLRDAVARCTTQVYPNAWTAIYIPLDNVGMW 186
Query: 284 SVHSNIWERYYLGEQFYISVVSPARSLRDEYNMPDNALRCGKVVG 418
++ + W R YLG+QFY+ V + + SLRDEY +P NAL CG+ G
Sbjct: 187 NLRTEFWARQYLGQQFYLRVYTDSTSLRDEYPIPKNALLCGRASG 321
>gb|CA824413.1|CA824413 R41F09 two-month-old roots from clone 'Beaupre' Populus trichocarpa
x Populus deltoides cDNA 5', mRNA sequence
Length = 601
Score = 144 bits (310), Expect = 4e-034
Identities = 54/139 (38%), Positives = 89/139 (64%)
Frame = +2 / +1
Query: 14 VNGPLHVIPNVITAEFRTFIEIVFENPEKSIDSLHVDGYAFFGVGMGPGKWSPEVRKTYN 193
+ GP + +VI +R F+E++ +N + + S H+ GYA F VGM G+W+ R TYN
Sbjct: 118 LTGPPKMATSVINGTYRGFMEVILQNNDTKMHSYHLSGYAVFVVGMDYGEWTENSRGTYN 297
Query: 194 LLDTVSRHTIQVYPRSWTAIMLTFDNAGMWSVHSNIWERYYLGEQFYISVVSPARSLRDE 373
D ++R T+Q YP +WTAI+++ DN G+W++ + + +YLG++ YI +V+P + + E
Sbjct: 298 KWDGIARSTVQAYPGAWTAILVSLDNVGVWNLRTENLDSWYLGQETYIRIVNPEETNKTE 477
Query: 374 YNMPDNALRCGKVVGLPLP 430
+PDNAL CG++ L P
Sbjct: 478 LPIPDNALFCGELSKLQKP 534
>gb|CV274281.1|CV274281 WS0172.B21_M11 PTxD-NR-A-8 Populus trichocarpa x Populus deltoides
cDNA clone WS0172_M11 3', mRNA sequence
Length = 903
Score = 144 bits (310), Expect = 4e-034
Identities = 54/139 (38%), Positives = 89/139 (64%)
Frame = +2 / -1
Query: 14 VNGPLHVIPNVITAEFRTFIEIVFENPEKSIDSLHVDGYAFFGVGMGPGKWSPEVRKTYN 193
+ GP + +VI +R F+E++ +N + + S H+ GYA F VGM G+W+ R TYN
Sbjct: 780 LTGPPKMATSVINGTYRGFMEVILQNNDTKMHSYHLSGYAVFVVGMDYGEWTENSRGTYN 601
Query: 194 LLDTVSRHTIQVYPRSWTAIMLTFDNAGMWSVHSNIWERYYLGEQFYISVVSPARSLRDE 373
D ++R T+Q YP +WTAI+++ DN G+W++ + + +YLG++ YI +V+P + + E
Sbjct: 600 KWDGIARSTVQAYPGAWTAILVSLDNVGVWNLRTENLDSWYLGQETYIRIVNPEETNKTE 421
Query: 374 YNMPDNALRCGKVVGLPLP 430
+PDNAL CG++ L P
Sbjct: 420 LPIPDNALFCGELSKLQKP 364
>gb|AJ777809.1|AJ777809 AJ777809 Populus euphratica root 3-6 months Populus euphratica cDNA
clone P0000400035D05F1, mRNA sequence
Length = 736
Score = 143 bits (307), Expect = 1e-033
Identities = 52/139 (37%), Positives = 89/139 (64%)
Frame = +2 / +1
Query: 14 VNGPLHVIPNVITAEFRTFIEIVFENPEKSIDSLHVDGYAFFGVGMGPGKWSPEVRKTYN 193
+ GP + +VI +R F+E++ +N + + S H+ GYA F VGM G+W+ R TYN
Sbjct: 175 LTGPPKMATSVINGTYRGFMEVILQNNDTKMHSYHLSGYAVFVVGMDYGEWTENSRGTYN 354
Query: 194 LLDTVSRHTIQVYPRSWTAIMLTFDNAGMWSVHSNIWERYYLGEQFYISVVSPARSLRDE 373
D ++R T+Q YP +WT I+++ DN G+W++ + + +YLG++ Y+ +V+P ++ + E
Sbjct: 355 KWDGIARSTVQAYPGAWTTILVSLDNVGVWNLRTENLDSWYLGQETYVRIVNPEKTNKTE 534
Query: 374 YNMPDNALRCGKVVGLPLP 430
+PDNAL CG++ L P
Sbjct: 535 LPIPDNALFCGELSKLQKP 591
>gb|DT518576.1|DT518576 WS02438.B21_J08 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02438_J08 3', mRNA sequence
Length = 860
Score = 139 bits (299), Expect = 1e-032
Identities = 50/122 (40%), Positives = 82/122 (67%)
Frame = +2 / -1
Query: 41 NVITAEFRTFIEIVFENPEKSIDSLHVDGYAFFGVGMGPGKWSPEVRKTYNLLDTVSRHT 220
+VI +R F+E++ +N + + S H+ GYA F VGM G+W+ R TYN D ++R T
Sbjct: 779 SVINGTYRGFMEVILQNNDTKMQSYHLSGYAVFVVGMDYGEWTENSRGTYNKWDGIARST 600
Query: 221 IQVYPRSWTAIMLTFDNAGMWSVHSNIWERYYLGEQFYISVVSPARSLRDEYNMPDNALR 400
+QVYP +WTAI+++ DN G+W++ + + +YLG++ Y+ +V+P + + E +PDNAL
Sbjct: 599 VQVYPGAWTAILVSLDNVGVWNLRTENLDSWYLGQETYVRIVNPEETNKTELPIPDNALF 420
Query: 401 CG 406
CG
Sbjct: 419 CG 414
>gb|BU832276.1|BU832276 T031F10 Populus apical shoot cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 719
Score = 138 bits (297), Expect = 2e-032
Identities = 50/122 (40%), Positives = 82/122 (67%)
Frame = +2 / +2
Query: 41 NVITAEFRTFIEIVFENPEKSIDSLHVDGYAFFGVGMGPGKWSPEVRKTYNLLDTVSRHT 220
+VI +R F+E++ +N + + S H+ GYA F VGM G+W+ R TYN D ++R T
Sbjct: 275 SVINGTYRGFMEVILQNNDTKMQSYHLSGYAVFVVGMDYGEWTENSRGTYNKWDGIARST 454
Query: 221 IQVYPRSWTAIMLTFDNAGMWSVHSNIWERYYLGEQFYISVVSPARSLRDEYNMPDNALR 400
+QVYP +WTAI+++ DN G+W++ + + +YLG++ Y+ +V+P + + E +PDNAL
Sbjct: 455 VQVYPGAWTAILVSLDNVGVWNLRTENLDSWYLGQETYVRIVNPEDTNKTELPVPDNALF 634
Query: 401 CG 406
CG
Sbjct: 635 CG 640
>gb|DT482101.1|DT482101 WS02533.BR_O14 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02533_O14 5', mRNA sequence
Length = 802
Score = 134 bits (287), Expect = 6e-031
Identities = 50/113 (44%), Positives = 79/113 (69%)
Frame = +2 / +1
Query: 14 VNGPLHVIPNVITAEFRTFIEIVFENPEKSIDSLHVDGYAFFGVGMGPGKWSPEVRKTYN 193
+N P V ++I F+ F+EI+F+N + ++ S H+DGYAFF VGM G W+ R TYN
Sbjct: 193 MNRPPKVDTSLINGTFKGFMEIIFQNNDTAVQSYHMDGYAFFVVGMDFGVWTENSRSTYN 372
Query: 194 LLDTVSRHTIQVYPRSWTAIMLTFDNAGMWSVHSNIWERYYLGEQFYISVVSP 352
D V+R T QV+P +WTAI+++ DNAG+W++ S + +YLG++ Y+S+++P
Sbjct: 373 KWDGVARSTTQVFPGAWTAILVSLDNAGIWNLRSENLDSWYLGQEVYLSIMNP 531
>gb|DT487515.1|DT487515 WS02533.B21_O14 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02533_O14 3', mRNA sequence
Length = 877
Score = 134 bits (287), Expect = 6e-031
Identities = 50/113 (44%), Positives = 79/113 (69%)
Frame = +2 / -3
Query: 14 VNGPLHVIPNVITAEFRTFIEIVFENPEKSIDSLHVDGYAFFGVGMGPGKWSPEVRKTYN 193
+N P V ++I F+ F+EI+F+N + ++ S H+DGYAFF VGM G W+ R TYN
Sbjct: 692 MNRPPKVDTSLINGTFKGFMEIIFQNNDTAVQSYHMDGYAFFVVGMDFGVWTENSRSTYN 513
Query: 194 LLDTVSRHTIQVYPRSWTAIMLTFDNAGMWSVHSNIWERYYLGEQFYISVVSP 352
D V+R T QV+P +WTAI+++ DNAG+W++ S + +YLG++ Y+S+++P
Sbjct: 512 KWDGVARSTTQVFPGAWTAILVSLDNAGIWNLRSENLDSWYLGQEVYLSIMNP 354
>gb|DN484355.1|DN484355 G130P50.3pR Populus tension wood cDNA library Populus tremula x
Populus tremuloides cDNA clone G130P50 3', mRNA sequence
Length = 685
Score = 133 bits (286), Expect = 8e-031
Identities = 48/121 (39%), Positives = 80/121 (66%)
Frame = +2 / -3
Query: 68 FIEIVFENPEKSIDSLHVDGYAFFGVGMGPGKWSPEVRKTYNLLDTVSRHTIQVYPRSWT 247
F+E++ +N + + S H+ GYA F VGM G+W+ R TYN D ++R T+Q YP +WT
Sbjct: 680 FMEVILQNNDTKMHSYHLSGYAVFVVGMDYGEWTENSRGTYNKWDGIARSTVQAYPGAWT 501
Query: 248 AIMLTFDNAGMWSVHSNIWERYYLGEQFYISVVSPARSLRDEYNMPDNALRCGKVVGLPL 427
AI+++ DN G+W++ + + +YLG++ Y+ +V+P + + E +PDNAL CG++ L
Sbjct: 500 AILVSLDNVGVWNLRTENLDSWYLGQETYVRIVNPEETNKTELPIPDNALFCGELSKLQK 321
Query: 428 P 430
P
Sbjct: 320 P 318
>gb|AI164321.1|AI164321 A059P32U Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA 5', mRNA sequence
Length = 452
Score = 118 bits (252), Expect(2) = 1e-030
Identities = 42/76 (55%), Positives = 58/76 (76%)
Frame = +2 / +1
Query: 95 EKSIDSLHVDGYAFFGVGMGPGKWSPEVRKTYNLLDTVSRHTIQVYPRSWTAIMLTFDNA 274
+K++ S H+DGY F+ +G G G+W+ R TYNL+D ++RHT+QVYP SWTAI ++ DN
Sbjct: 1 KKTMRSWHLDGYDFWVIGYGNGQWTSAKRSTYNLVDALTRHTVQVYPNSWTAIYVSLDNQ 180
Query: 275 GMWSVHSNIWERYYLG 322
GMW++ S IWER YLG
Sbjct: 181 GMWNLRSAIWERQYLG 228
Score = 35.0 bits (70), Expect(2) = 1e-030
Identities = 12/19 (63%), Positives = 16/19 (84%)
Frame = +2 / +2
Query: 353 ARSLRDEYNMPDNALRCGK 409
+ SL +EY++P NALRCGK
Sbjct: 257 SHSLENEYDIPSNALRCGK 313
>gb|CA931453.1|CA931453 MTU2TA.P7.E06 Aspen apex cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 580
Score = 131 bits (280), Expect = 5e-030
Identities = 49/122 (40%), Positives = 78/122 (63%)
Frame = +2 / -1
Query: 41 NVITAEFRTFIEIVFENPEKSIDSLHVDGYAFFGVGMGPGKWSPEVRKTYNLLDTVSRHT 220
+VI A + FIEI+ + + + S H++GY+FF VGM G WS R +YN D +SR T
Sbjct: 580 SVINATSKGFIEIILQTNDTRMQSFHMNGYSFFVVGMDWGIWSENSRGSYNKWDAISRST 401
Query: 221 IQVYPRSWTAIMLTFDNAGMWSVHSNIWERYYLGEQFYISVVSPARSLRDEYNMPDNALR 400
++VYP WTA++ + DNAG+W++ +R+YLG++ Y+ +++P + E P+N L
Sbjct: 400 VEVYPGGWTAVLASLDNAGVWNLRVENLDRWYLGQETYMRIINPEENGETEMPPPNNVLY 221
Query: 401 CG 406
CG
Sbjct: 220 CG 215
>gb|BU812401.1|BU812401 UL95TH09 Populus leaf cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 506
Score = 129 bits (276), Expect = 2e-029
Identities = 52/105 (49%), Positives = 67/105 (63%)
Frame = +2 / +3
Query: 134 FFGVGMGPGKWSPEVRKTYNLLDTVSRHTIQVYPRSWTAIMLTFDNAGMWSVHSNIWERY 313
FF VGM G+W+ R YNL D V+R T QVYP +WTAI + DN GMW++ + W R
Sbjct: 3 FFVVGMDGGQWTTAGRDQYNLRDAVARCTTQVYPNAWTAIYIPLDNVGMWNLRTEFWARQ 182
Query: 314 YLGEQFYISVVSPARSLRDEYNMPDNALRCGKVVGLPLPPSYAPA 448
YLG+QFY+ V + + SLRDE+ +P NAL CG+ G P A A
Sbjct: 183 YLGQQFYLRVYTDSTSLRDEFPIPKNALLCGRASGRRTRPL*ASA 317
>gb|CA930944.1|CA930944 MTU2TA.P12.F04 Aspen apex cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 438
Score = 127 bits (271), Expect = 9e-029
Identities = 47/113 (41%), Positives = 74/113 (65%)
Frame = +2 / +2
Query: 14 VNGPLHVIPNVITAEFRTFIEIVFENPEKSIDSLHVDGYAFFGVGMGPGKWSPEVRKTYN 193
+N H +VI A F+ FIEI+ +N + + S H++GY+FF VGM G WS R +YN
Sbjct: 68 LNRTFHRDTSVINATFKGFIEIILQNNDTRMQSFHMNGYSFFVVGMDWGIWSENSRGSYN 247
Query: 194 LLDTVSRHTIQVYPRSWTAIMLTFDNAGMWSVHSNIWERYYLGEQFYISVVSP 352
D +SR T++VYP WTA++ + DNAG+W++ +R+YLG+ Y+ +++P
Sbjct: 248 KWDAISRSTVEVYPGGWTAVLASLDNAGVWNLRVENLDRWYLGQDTYMRIINP 406
>gb|CX655663.1|CX655663 PO02038B07 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO02038B07 5', mRNA sequence
Length = 576
Score = 127 bits (271), Expect = 9e-029
Identities = 48/95 (50%), Positives = 66/95 (69%)
Frame = +2 / +2
Query: 20 GPLHVIPNVITAEFRTFIEIVFENPEKSIDSLHVDGYAFFGVGMGPGKWSPEVRKTYNLL 199
G L++ +V+T +R F+EIVF+N E + S H+DGY+FF VGM G+W+ R YNL
Sbjct: 290 GGLYLDTSVLTLPYRAFVEIVFQNNEDIVQSWHLDGYSFFVVGMDGGQWTTASRNQYNLR 469
Query: 200 DTVSRHTIQVYPRSWTAIMLTFDNAGMWSVHSNIW 304
D VSR TIQVYP++WTAI + DN GMW++ + W
Sbjct: 470 DGVSRCTIQVYPKAWTAIYIPLDNVGMWNLRTEFW 574
>gb|AC149575.1| Populus trichocarpa clone Pop1-41G18, complete sequence
Length = 111678
Score = 102 bits (218), Expect(2) = 2e-028
Identities = 38/66 (57%), Positives = 47/66 (71%)
Frame = +2 / -1
Query: 221 IQVYPRSWTAIMLTFDNAGMWSVHSNIWERYYLGEQFYISVVSPARSLRDEYNMPDNALR 400
+QVYP+SWTAI + DN GMW++ S W R YLG+QFY+ V SPA S RDE +P NAL
Sbjct: 49368 MQVYPKSWTAIYMALDNVGMWNIRSENWARQYLGQQFYLRVYSPAHSWRDELPIPKNALL 49189
Query: 401 CGKVVG 418
CG+ G
Sbjct: 49188 CGRARG 49171
Score = 52.4 bits (108), Expect(2) = 2e-028
Identities = 20/35 (57%), Positives = 28/35 (80%)
Frame = +2 / -2
Query: 44 VITAEFRTFIEIVFENPEKSIDSLHVDGYAFFGVG 148
V++A FR FIEIVF+N E ++ S H+DG++FF VG
Sbjct: 49763 VMSANFREFIEIVFQNWEDTVQSWHIDGHSFFVVG 49659
>gb|DN502243.1|DN502243 V062A01.5pR Populus male catkins cDNA library Populus trichocarpa
cDNA clone V062A01 5', mRNA sequence
Length = 530
Score = 67.5 bits (141), Expect(3) = 1e-027
Identities = 24/44 (54%), Positives = 31/44 (70%)
Frame = +2 / +2
Query: 158 GKWSPEVRKTYNLLDTVSRHTIQVYPRSWTAIMLTFDNAGMWSV 289
G+W+ R YNL D V+R T QVYP++WTAI + DN GMWS+
Sbjct: 101 GQWTTASRDQYNLRDAVARCTTQVYPKAWTAIYIPLDNVGMWSI 232
Score = 51.5 bits (106), Expect(3) = 1e-027
Identities = 19/35 (54%), Positives = 26/35 (74%)
Frame = +2 / +3
Query: 314 YLGEQFYISVVSPARSLRDEYNMPDNALRCGKVVG 418
YLG+QFY+ V + + SLRDE+ +P NAL CG+ G
Sbjct: 231 YLGQQFYLRVYTDSTSLRDEFPIPKNALLCGRASG 335
Score = 41.8 bits (85), Expect(3) = 1e-027
Identities = 14/30 (46%), Positives = 22/30 (73%)
Frame = +2 / +2
Query: 44 VITAEFRTFIEIVFENPEKSIDSLHVDGYA 133
V+T +R ++EIVF+N E + S H+DGY+
Sbjct: 11 VLTVPYRAYVEIVFQNDEDILQSWHLDGYS 100
>gb|CV230926.1|CV230926 WS0193.B21_A09 PT-DX-N-A-10 Populus trichocarpa cDNA clone
WS0193_A09 3', mRNA sequence
Length = 438
Score = 122 bits (260), Expect = 3e-027
Identities = 45/77 (58%), Positives = 55/77 (71%)
Frame = +2 / -3
Query: 188 YNLLDTVSRHTIQVYPRSWTAIMLTFDNAGMWSVHSNIWERYYLGEQFYISVVSPARSLR 367
YNL D VSR T QVYP+SWTAI + DN GMW++ + W R YLG+QFY+ V SP S R
Sbjct: 433 YNLRDAVSRCTTQVYPKSWTAIYIALDNVGMWNIRTEFWARQYLGQQFYMRVYSPVESPR 254
Query: 368 DEYNMPDNALRCGKVVG 418
DEY +P NAL CG+ +G
Sbjct: 253 DEYPIPKNALLCGRAIG 203
>gb|AI164970.1|AI164970 A071P61U Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA 5', mRNA sequence
Length = 384
Score = 120 bits (257), Expect = 8e-027
Identities = 43/101 (42%), Positives = 69/101 (68%)
Frame = +2 / +2
Query: 110 SLHVDGYAFFGVGMGPGKWSPEVRKTYNLLDTVSRHTIQVYPRSWTAIMLTFDNAGMWSV 289
S H+ GYA F VGM G+W+ R TYN D ++R T+Q YP +WTAI+++ DN G+W++
Sbjct: 11 SYHLSGYAVFVVGMDYGEWTENSRGTYNKWDGIARSTVQAYPGAWTAILVSLDNVGVWNL 190
Query: 290 HSNIWERYYLGEQFYISVVSPARSLRDEYNMPDNALRCGKV 412
+ + +YLG++ Y+ +V+P + + E +PDNAL CG++
Sbjct: 191 RTENLDSWYLGQETYVRIVNPEETNKTELPIPDNALFCGEL 313
>gb|BI131980.1|BI131980 G128P78Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 314
Score = 118 bits (252), Expect = 4e-026
Identities = 44/76 (57%), Positives = 54/76 (71%)
Frame = +2 / +1
Query: 188 YNLLDTVSRHTIQVYPRSWTAIMLTFDNAGMWSVHSNIWERYYLGEQFYISVVSPARSLR 367
YNL D VSR T QVYP+SWTAI + DN GMW++ + W R YLG+QFY+ V SP S R
Sbjct: 1 YNLRDAVSRCTTQVYPKSWTAIYIALDNVGMWNIRTEFWARQYLGQQFYMRVYSPVESPR 180
Query: 368 DEYNMPDNALRCGKVV 415
DEY +P NAL CG+ +
Sbjct: 181 DEYPIPKNALLCGRAL 228
Database: Populus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:49 PM
Number of letters in database: 203,408,664
Number of sequences in database: 369,679
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 285,963,935
Number of Sequences: 369679
Number of extensions: 3608151
Number of successful extensions: 61151
Number of sequences better than 1.0e-020: 66
length of database: 67,802,888
effective HSP length: 51
effective length of database: 48,949,259
effective search space used: 8419272548
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)