TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3071418.2.1
(1432 letters)
Database: Populus_nucl_with_EST.fasta
369,679 sequences; 203,408,664 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CK096481.1|CK096481 UB15CPH11.3pR Populus active cambium... 135 1e-044
gb|CV280707.1|CV280707 WS0137.B21_G07 PTxD-IL-FL-A-4 Populu... 139 5e-044
gb|CV280517.1|CV280517 WS0136.B21_J20 PTxD-IL-FL-A-4 Populu... 139 5e-044
gb|DT476355.1|DT476355 WS01229.B21_E11 PT-GT-FL-A-3 Populus... 138 8e-044
gb|DT503437.1|DT503437 WS0136.BR_J20 PTxD-IL-FL-A-4 Populus... 139 4e-043
gb|DT503659.1|DT503659 WS0137.BR_G07 PTxD-IL-FL-A-4 Populus... 139 4e-043
gb|DT504273.1|DT504273 WS01312.B21_L07 PTxD-IL-FL-A-4 Popul... 134 1e-042
gb|DV465820.1|DV465820 MTUNUL1.P43.E12 NUL Populus fremonti... 125 5e-038
gb|DN488662.1|DN488662 S021B06.3pR Populus imbibed seed cDN... 158 9e-038
gb|CA932779.1|CA932779 MTU5CS.P17.C10 Aspen stem cDNA Libra... 107 3e-036
gb|AJ772970.1|AJ772970 AJ772970 Populus euphratica leaf 3-6... 79 1e-035
gb|DT493173.1|DT493173 WS02553.C21_J21 PT-MB-N-A-15 Populus... 124 3e-035
gb|CV235235.1|CV235235 WS01218.B21_E23 PT-GT-FL-A-3 Populus... 107 7e-035
gb|DT502488.1|DT502488 WS0133.BR_C08 PTxD-IL-FL-A-4 Populus... 111 8e-035
gb|DN490332.1|DN490332 UK116TF06.3pR Populus apical shoot c... 124 1e-034
gb|DT505641.1|DT505641 WS01811.C21_H13 PTxD-IL-N-A-9 Populu... 113 1e-032
gb|CV225757.1|CV225757 WS0162.B21_E24 PT-DX-A-7 Populus tri... 120 2e-032
gb|CV239394.1|CV239394 WS0232.B21_E06 PT-MB-A-13 Populus tr... 108 2e-030
gb|DT489174.1|DT489174 WS02538.B21_H23 PT-MB-N-A-15 Populus... 108 2e-030
gb|CV234439.1|CV234439 WS01214.B21_O21 PT-GT-FL-A-3 Populus... 108 2e-030
gb|CV240212.1|CV240212 WS0234.B21_M02 PT-MB-A-13 Populus tr... 106 5e-030
gb|CA933451.1|CA933451 MTU5CS.P8.C02 Aspen stem cDNA Librar... 81 2e-028
gb|CA932285.1|CA932285 MTU5CS.P11.A06 Aspen stem cDNA Libra... 81 2e-028
emb|AJ698925.1| Populus deltoides x Populus maximowiczii pa... 73 4e-027
gb|CK099728.1|CK099728 A082P19.5pR Hybrid aspen plasmid lib... 122 7e-027
gb|CN523142.1|CN523142 GQ015M01.B3_G24 GQ015 Populus tricho... 120 3e-026
gb|CV234783.1|CV234783 WS01216.B21_E17 PT-GT-FL-A-3 Populus... 78 4e-026
gb|AJ771700.1|AJ771700 AJ771700 Populus euphratica root 3-6... 113 2e-024
gb|CX659487.1|CX659487 PO01031C05 Poplar SC cDNA library Po... 94 4e-024
gb|CX659497.1|CX659497 PO01031D04 Poplar SC cDNA library Po... 94 4e-024
gb|CX659511.1|CX659511 PO01031E10 Poplar SC cDNA library Po... 94 4e-024
gb|DT484406.1|DT484406 WS02525.B21_F04 PT-MB-N-A-15 Populus... 95 4e-023
gb|DT501087.1|DT501087 WS0131.BR_H01 PTxD-IL-FL-A-4 Populus... 69 2e-022
gb|AI165359.1|AI165359 A082p19u Hybrid aspen plasmid librar... 80 9e-022
emb|A26486.1| Poplar pOMT1.A/pOMT1.B combined sequence 95 6e-021
>gb|CK096481.1|CK096481 UB15CPH11.3pR Populus active cambium cDNA library Populus tremula
cDNA clone UB15CPH11 3', mRNA sequence
Length = 882
Score = 135 bits (290), Expect(3) = 1e-044
Identities = 55/117 (47%), Positives = 73/117 (62%)
Frame = -1 / -2
Query: 799 VNALLNKGMAADSRFLMPIVLRECGETFRGIDSLVDVXXXXXXXXXXXXXAFPHLKCSVL 620
+N L N+ MA DS +VL +C F G+ SLVDV AFPH+ C+V
Sbjct: 776 LNNLFNEAMARDSILASKLVLFKCKGIFEGVSSLVDVGGGLGTMAKGIAEAFPHMDCTVF 597
Query: 619 DLPHVVAGAPSDGNVQFVAGNMFESIPPATAVFLKKTLHDWGDDECVKILKNCKQAI 449
DLPHVV+ N+++V G+MF+ +PPA A+ LK LHDW D++CVKILK C+QAI
Sbjct: 596 DLPHVVSDLQGCKNLKYVGGDMFQGVPPAEAILLKWILHDWSDEDCVKILKRCRQAI 426
Score = 48.7 bits (100), Expect(3) = 1e-044
Identities = 18/38 (47%), Positives = 29/38 (76%)
Frame = -1 / -2
Query: 343 MMAVNGVERDEQEWKKIFTEAGFKDYKILPVIGDVSVI 230
M+ +G+ER+E+EW K+F +AGF +YKI PV+ ++I
Sbjct: 311 MVDADGMERNEKEWAKLFFDAGFLNYKIHPVLATRALI 198
Score = 35.4 bits (71), Expect(3) = 1e-044
Identities = 15/31 (48%), Positives = 22/31 (70%)
Frame = -1 / -2
Query: 430 GKVIILDVVVGYKQSNIKHQETQVMFDLYMM 338
GKVII+D+V+ + ETQ++FDL+MM
Sbjct: 401 GKVIIIDMVIENLNGDEGSIETQLLFDLHMM 309
>gb|CV280707.1|CV280707 WS0137.B21_G07 PTxD-IL-FL-A-4 Populus trichocarpa x Populus
deltoides cDNA clone WS0137_G07 3', mRNA sequence
Length = 919
Score = 139 bits (298), Expect(3) = 5e-044
Identities = 57/117 (48%), Positives = 76/117 (64%)
Frame = -1 / -2
Query: 799 VNALLNKGMAADSRFLMPIVLRECGETFRGIDSLVDVXXXXXXXXXXXXXAFPHLKCSVL 620
+N L N+ MA DS +V+ +C F G+ SLVDV AFPH+ C+VL
Sbjct: 750 INNLCNEVMARDSILACKLVVNKCKGIFEGVSSLVDVGGGLGTMAKGITEAFPHMDCTVL 571
Query: 619 DLPHVVAGAPSDGNVQFVAGNMFESIPPATAVFLKKTLHDWGDDECVKILKNCKQAI 449
DLPHVV+ N++FVAG+MF+++PPA A+ LK LH+W D++CVKILK CKQAI
Sbjct: 570 DLPHVVSDLQGCKNLKFVAGDMFQAVPPAEAILLKWILHNWSDEDCVKILKRCKQAI 400
Score = 52.8 bits (109), Expect(3) = 5e-044
Identities = 19/38 (50%), Positives = 29/38 (76%)
Frame = -1 / -2
Query: 343 MMAVNGVERDEQEWKKIFTEAGFKDYKILPVIGDVSVI 230
M+ G+ER+E+EW K+F +AGF +YKI PV+G ++I
Sbjct: 285 MVVAGGMERNEKEWAKLFFDAGFLNYKIYPVLGPRALI 172
Score = 25.4 bits (49), Expect(3) = 5e-044
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = -1 / -2
Query: 370 ETQVMFDLYMMAVNG 326
ETQ+ FDL MM V G
Sbjct: 315 ETQLFFDLQMMVVAG 271
>gb|CV280517.1|CV280517 WS0136.B21_J20 PTxD-IL-FL-A-4 Populus trichocarpa x Populus
deltoides cDNA clone WS0136_J20 3', mRNA sequence
Length = 893
Score = 139 bits (298), Expect(3) = 5e-044
Identities = 57/117 (48%), Positives = 76/117 (64%)
Frame = -1 / -2
Query: 799 VNALLNKGMAADSRFLMPIVLRECGETFRGIDSLVDVXXXXXXXXXXXXXAFPHLKCSVL 620
+N L N+ MA DS +V+ +C F G+ SLVDV AFPH+ C+VL
Sbjct: 742 INNLCNEVMARDSILACKLVVNKCKGIFEGVSSLVDVGGGLGTMAKGITEAFPHMDCTVL 563
Query: 619 DLPHVVAGAPSDGNVQFVAGNMFESIPPATAVFLKKTLHDWGDDECVKILKNCKQAI 449
DLPHVV+ N++FVAG+MF+++PPA A+ LK LH+W D++CVKILK CKQAI
Sbjct: 562 DLPHVVSDLQGCKNLKFVAGDMFQAVPPAEAILLKWILHNWSDEDCVKILKRCKQAI 392
Score = 52.8 bits (109), Expect(3) = 5e-044
Identities = 19/38 (50%), Positives = 29/38 (76%)
Frame = -1 / -2
Query: 343 MMAVNGVERDEQEWKKIFTEAGFKDYKILPVIGDVSVI 230
M+ G+ER+E+EW K+F +AGF +YKI PV+G ++I
Sbjct: 277 MVVAGGMERNEKEWAKLFFDAGFLNYKIYPVLGPRALI 164
Score = 25.4 bits (49), Expect(3) = 5e-044
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = -1 / -2
Query: 370 ETQVMFDLYMMAVNG 326
ETQ+ FDL MM V G
Sbjct: 307 ETQLFFDLQMMVVAG 263
>gb|DT476355.1|DT476355 WS01229.B21_E11 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01229_E11 3', mRNA sequence
Length = 887
Score = 138 bits (295), Expect(3) = 8e-044
Identities = 56/117 (47%), Positives = 76/117 (64%)
Frame = -1 / -2
Query: 799 VNALLNKGMAADSRFLMPIVLRECGETFRGIDSLVDVXXXXXXXXXXXXXAFPHLKCSVL 620
+N L N+ MA DS +V+ +C F G+ SLVDV AFPH+ C+VL
Sbjct: 817 INNLCNEVMARDSILACKLVVNKCKGIFEGVSSLVDVGGGIGTMAKGITEAFPHMDCTVL 638
Query: 619 DLPHVVAGAPSDGNVQFVAGNMFESIPPATAVFLKKTLHDWGDDECVKILKNCKQAI 449
DLPHVV+ N+++VAG+MF+++PPA A+ LK LH+W D++CVKILK CKQAI
Sbjct: 637 DLPHVVSDLQGCKNLKYVAGDMFQAVPPAEAILLKWMLHNWSDEDCVKILKRCKQAI 467
Score = 53.8 bits (111), Expect(3) = 8e-044
Identities = 20/38 (52%), Positives = 30/38 (78%)
Frame = -1 / -2
Query: 343 MMAVNGVERDEQEWKKIFTEAGFKDYKILPVIGDVSVI 230
M+ V G+ER+E+EW K+F +AGF +YKI PV+G ++I
Sbjct: 352 MVVVGGMERNEKEWAKLFFDAGFLNYKIHPVLGTRALI 239
Score = 24.9 bits (48), Expect(3) = 8e-044
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = -1 / -2
Query: 370 ETQVMFDLYMMAVNG 326
ETQ+ FDL MM V G
Sbjct: 382 ETQLFFDLQMMVVVG 338
>gb|DT503437.1|DT503437 WS0136.BR_J20 PTxD-IL-FL-A-4 Populus trichocarpa x Populus
deltoides cDNA clone WS0136_J20 5', mRNA sequence
Length = 864
Score = 139 bits (298), Expect(3) = 4e-043
Identities = 57/117 (48%), Positives = 76/117 (64%)
Frame = -1 / +3
Query: 799 VNALLNKGMAADSRFLMPIVLRECGETFRGIDSLVDVXXXXXXXXXXXXXAFPHLKCSVL 620
+N L N+ MA DS +V+ +C F G+ SLVDV AFPH+ C+VL
Sbjct: 501 INNLCNEVMARDSILACKLVVNKCKGIFEGVSSLVDVGGGLGTMAKGITEAFPHMDCTVL 680
Query: 619 DLPHVVAGAPSDGNVQFVAGNMFESIPPATAVFLKKTLHDWGDDECVKILKNCKQAI 449
DLPHVV+ N++FVAG+MF+++PPA A+ LK LH+W D++CVKILK CKQAI
Sbjct: 681 DLPHVVSDLQGCKNLKFVAGDMFQAVPPAEAILLKWILHNWSDEDCVKILKRCKQAI 851
Score = 43.7 bits (89), Expect(3) = 4e-043
Identities = 18/46 (39%), Positives = 26/46 (56%)
Frame = -1 / +3
Query: 1333 IMQESSSQDLLQAHDELLHHSLCFAKSLALAVALDLRIPDAIHHHG 1196
++ E S+ +LLQA + +H F S+ L A+ L IPD I HG
Sbjct: 21 LINEESASELLQAQTHVWNHIFYFINSMTLKCAVQLGIPDVIQKHG 158
Score = 37.3 bits (75), Expect(3) = 4e-043
Identities = 14/33 (42%), Positives = 23/33 (69%)
Frame = -1 / +3
Query: 1183 TLLQILAETALHPSKLRALRRLMRVLTVTGIFS 1085
TL ++++ +HPSK + + RLMR+L +G FS
Sbjct: 168 TLSELVSALPIHPSKAQYVHRLMRILVHSGFFS 266
>gb|DT503659.1|DT503659 WS0137.BR_G07 PTxD-IL-FL-A-4 Populus trichocarpa x Populus
deltoides cDNA clone WS0137_G07 5', mRNA sequence
Length = 905
Score = 139 bits (298), Expect(3) = 4e-043
Identities = 57/117 (48%), Positives = 76/117 (64%)
Frame = -1 / +3
Query: 799 VNALLNKGMAADSRFLMPIVLRECGETFRGIDSLVDVXXXXXXXXXXXXXAFPHLKCSVL 620
+N L N+ MA DS +V+ +C F G+ SLVDV AFPH+ C+VL
Sbjct: 504 INNLCNEVMARDSILACKLVVNKCKGIFEGVSSLVDVGGGLGTMAKGITEAFPHMDCTVL 683
Query: 619 DLPHVVAGAPSDGNVQFVAGNMFESIPPATAVFLKKTLHDWGDDECVKILKNCKQAI 449
DLPHVV+ N++FVAG+MF+++PPA A+ LK LH+W D++CVKILK CKQAI
Sbjct: 684 DLPHVVSDLQGCKNLKFVAGDMFQAVPPAEAILLKWILHNWSDEDCVKILKRCKQAI 854
Score = 43.7 bits (89), Expect(3) = 4e-043
Identities = 18/46 (39%), Positives = 26/46 (56%)
Frame = -1 / +3
Query: 1333 IMQESSSQDLLQAHDELLHHSLCFAKSLALAVALDLRIPDAIHHHG 1196
++ E S+ +LLQA + +H F S+ L A+ L IPD I HG
Sbjct: 24 LINEESASELLQAQTHVWNHIFYFINSMTLKCAVQLGIPDVIQKHG 161
Score = 37.3 bits (75), Expect(3) = 4e-043
Identities = 14/33 (42%), Positives = 23/33 (69%)
Frame = -1 / +3
Query: 1183 TLLQILAETALHPSKLRALRRLMRVLTVTGIFS 1085
TL ++++ +HPSK + + RLMR+L +G FS
Sbjct: 171 TLSELVSALPIHPSKAQYVHRLMRILVHSGFFS 269
>gb|DT504273.1|DT504273 WS01312.B21_L07 PTxD-IL-FL-A-4 Populus trichocarpa x Populus
deltoides cDNA clone WS01312_L07 3', mRNA sequence
Length = 822
Score = 134 bits (288), Expect(3) = 1e-042
Identities = 56/117 (47%), Positives = 75/117 (64%)
Frame = -1 / -1
Query: 799 VNALLNKGMAADSRFLMPIVLRECGETFRGIDSLVDVXXXXXXXXXXXXXAFPHLKCSVL 620
+N L N+ MA DS +V+ +C F G+ SLVDV AFP + C+VL
Sbjct: 771 INNLCNEVMARDSILACKLVVNKCKGIFEGVSSLVDVGGGLGTMAKGITEAFPPMDCTVL 592
Query: 619 DLPHVVAGAPSDGNVQFVAGNMFESIPPATAVFLKKTLHDWGDDECVKILKNCKQAI 449
DLPHVV+ N++FVAG+MF+++PPA A+ LK LH+W D++CVKILK CKQAI
Sbjct: 591 DLPHVVSDLQGCKNLKFVAGDMFQAVPPAEAILLKWILHNWSDEDCVKILKRCKQAI 421
Score = 52.8 bits (109), Expect(3) = 1e-042
Identities = 19/38 (50%), Positives = 29/38 (76%)
Frame = -1 / -1
Query: 343 MMAVNGVERDEQEWKKIFTEAGFKDYKILPVIGDVSVI 230
M+ G+ER+E+EW K+F +AGF +YKI PV+G ++I
Sbjct: 306 MVVAGGMERNEKEWAKLFFDAGFLNYKIYPVLGPRALI 193
Score = 25.4 bits (49), Expect(3) = 1e-042
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = -1 / -1
Query: 370 ETQVMFDLYMMAVNG 326
ETQ+ FDL MM V G
Sbjct: 336 ETQLFFDLQMMVVAG 292
>gb|DV465820.1|DV465820 MTUNUL1.P43.E12 NUL Populus fremontii x Populus angustifolia cDNA,
mRNA sequence
Length = 850
Score = 125 bits (268), Expect(3) = 5e-038
Identities = 51/111 (45%), Positives = 71/111 (63%)
Frame = -1 / +1
Query: 799 VNALLNKGMAADSRFLMPIVLRECGETFRGIDSLVDVXXXXXXXXXXXXXAFPHLKCSVL 620
+N L N+ MA DS +V+ +C F G+ SLVDV AFPH+ C+VL
Sbjct: 514 INNLCNEVMARDSILACKLVVNKCKGIFEGVSSLVDVGGGIGTMAKGITEAFPHMDCTVL 693
Query: 619 DLPHVVAGAPSDGNVQFVAGNMFESIPPATAVFLKKTLHDWGDDECVKILK 467
DLPHVV+ N+++VAG+MF+++PPA A+ LK LH+W D++CVKILK
Sbjct: 694 DLPHVVSDLQGCKNLKYVAGDMFQAVPPAEAILLKWMLHNWSDEDCVKILK 846
Score = 40.0 bits (81), Expect(3) = 5e-038
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = -1 / +1
Query: 1318 SSQDLLQAHDELLHHSLCFAKSLALAVALDLRIPDAIHHHG 1196
S+ +LLQA + +H F S+ L A+ L IPD I HG
Sbjct: 49 SASELLQAQTHVWNHIFYFINSMTLKCAVQLGIPDVIQKHG 171
Score = 37.3 bits (75), Expect(3) = 5e-038
Identities = 14/33 (42%), Positives = 23/33 (69%)
Frame = -1 / +1
Query: 1183 TLLQILAETALHPSKLRALRRLMRVLTVTGIFS 1085
TL ++++ +HPSK + + RLMR+L +G FS
Sbjct: 181 TLSELVSALPIHPSKAQYVHRLMRILVHSGFFS 279
>gb|DN488662.1|DN488662 S021B06.3pR Populus imbibed seed cDNA library Populus tremula cDNA
clone S021B06 3', mRNA sequence
Length = 568
Score = 158 bits (339), Expect = 9e-038
Identities = 68/139 (48%), Positives = 89/139 (64%)
Frame = -1 / -3
Query: 646 FPHLKCSVLDLPHVVAGAPSDGNVQFVAGNMFESIPPATAVFLKKTLHDWGDDECVKILK 467
F HL C+V DLPHVVAG N++++ G+MFE+IP A A+ LK LHDW ++ECVKILK
Sbjct: 512 FQHLDCTVFDLPHVVAGLEGSENLKYLGGDMFEAIPQADAILLKWILHDWNEEECVKILK 333
Query: 466 NCKQAISPRDAGGKVIILDVVVGYKQSNIKHQETQVMFDLYMMAVNGVERDEQEWKKIFT 287
CK+ I R G +II VV K+ + L M+ V G ER+E+EW K+FT
Sbjct: 332 QCKEEIKGRGGGKVIIIDMVVENNKEEEGSTETQLFFDMLMMILVTGKERNEKEWAKLFT 153
Query: 286 EAGFKDYKILPVIGDVSVI 230
+AGF YKI PV+G S+I
Sbjct: 152 DAGFSHYKINPVLGLRSLI 96
>gb|CA932779.1|CA932779 MTU5CS.P17.C10 Aspen stem cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 624
Score = 107 bits (228), Expect(3) = 3e-036
Identities = 38/69 (55%), Positives = 53/69 (76%)
Frame = -1 / -1
Query: 646 FPHLKCSVLDLPHVVAGAPSDGNVQFVAGNMFESIPPATAVFLKKTLHDWGDDECVKILK 467
FPH+ C+V +LPHVV+ N+++VAG+MF+ +PPA A+ LK LHDW D++CVKILK
Sbjct: 621 FPHMDCTVFELPHVVSDLQGCKNLKYVAGDMFQGVPPAEAILLKWMLHDWSDEDCVKILK 442
Query: 466 NCKQAISPR 440
CKQAI+ +
Sbjct: 441 RCKQAITSK 415
Score = 51.5 bits (106), Expect(3) = 3e-036
Identities = 19/38 (50%), Positives = 30/38 (78%)
Frame = -1 / -1
Query: 343 MMAVNGVERDEQEWKKIFTEAGFKDYKILPVIGDVSVI 230
M+A +G+ER+E+EW K+F +AGF +YKI PV+ ++I
Sbjct: 309 MVAASGMERNEEEWAKLFFDAGFLNYKIHPVLDTRALI 196
Score = 32.2 bits (64), Expect(3) = 3e-036
Identities = 15/31 (48%), Positives = 21/31 (67%)
Frame = -1 / -1
Query: 430 GKVIILDVVVGYKQSNIKHQETQVMFDLYMM 338
GKVII+D+V + + ETQ++FDL MM
Sbjct: 399 GKVIIIDMVRENQNGDEGSIETQLLFDLEMM 307
>gb|AJ772970.1|AJ772970 AJ772970 Populus euphratica leaf 3-6 months Populus euphratica cDNA
clone P0000200003B11F1, mRNA sequence
Length = 597
Score = 78.5 bits (165), Expect(3) = 1e-035
Identities = 27/44 (61%), Positives = 36/44 (81%)
Frame = -1 / +2
Query: 580 NVQFVAGNMFESIPPATAVFLKKTLHDWGDDECVKILKNCKQAI 449
N+++V G+MFE++PPA + LK TLHDW D++CVKILK CK AI
Sbjct: 281 NLKYVGGDMFEAVPPADVILLKWTLHDWNDEDCVKILKQCKHAI 412
Score = 60.6 bits (126), Expect(3) = 1e-035
Identities = 26/63 (41%), Positives = 35/63 (55%)
Frame = -1 / +2
Query: 790 LLNKGMAADSRFLMPIVLRECGETFRGIDSLVDVXXXXXXXXXXXXXAFPHLKCSVLDLP 611
L N+ MA+DS +V+ +C F G++SLVDV AFPH+ C+V DLP
Sbjct: 68 LFNEAMASDSILASKLVVSKCQGIFEGVNSLVDVGGGSGTMAKGIAEAFPHMDCTVFDLP 247
Query: 610 HVV 602
VV
Sbjct: 248 RVV 256
Score = 50.1 bits (103), Expect(3) = 1e-035
Identities = 21/52 (40%), Positives = 33/52 (63%)
Frame = -1 / +2
Query: 430 GKVIILDVVVGYKQSNIKHQETQVMFDLYMMAVNGVERDEQEWKKIFTEAGF 275
GKVII+D+V G + + ++ + M+ V G+ER+E EW K+F +AGF
Sbjct: 437 GKVIIIDIVRGSQNGDESNETQLLWDLEMMVTVTGLERNEMEWAKLFFDAGF 592
>gb|DT493173.1|DT493173 WS02553.C21_J21 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02553_J21 3', mRNA sequence
Length = 822
Score = 124 bits (265), Expect(2) = 3e-035
Identities = 54/118 (45%), Positives = 71/118 (60%)
Frame = -1 / -1
Query: 802 DVNALLNKGMAADSRFLMPIVLRECGETFRGIDSLVDVXXXXXXXXXXXXXAFPHLKCSV 623
+VN + N+ MA S M +L + F I SLVDV A+PH++
Sbjct: 777 EVNRIFNEAMACTSNITMRAILSHYKDGFNNIRSLVDVAGGIGGHVAEIVRAYPHIEGIN 598
Query: 622 LDLPHVVAGAPSDGNVQFVAGNMFESIPPATAVFLKKTLHDWGDDECVKILKNCKQAI 449
DLPHVVA AP V VAGNMFE+IP A A+F+++ LHDW D+ CV+IL+NCK+AI
Sbjct: 597 FDLPHVVATAPKYEGVSHVAGNMFEAIPNADAIFIQRILHDWTDESCVEILRNCKKAI 424
Score = 45.5 bits (93), Expect(2) = 3e-035
Identities = 17/40 (42%), Positives = 24/40 (60%)
Frame = -1 / -1
Query: 349 LYMMAVNGVERDEQEWKKIFTEAGFKDYKILPVIGDVSVI 230
++ + G ER EQEWKK+ E GF YKI+ + S+I
Sbjct: 324 MFALTTGGKERTEQEWKKLLEEGGFSRYKIIKIPALESII 205
>gb|CV235235.1|CV235235 WS01218.B21_E23 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01218_E23 3', mRNA sequence
Length = 714
Score = 107 bits (229), Expect(3) = 7e-035
Identities = 44/85 (51%), Positives = 57/85 (67%)
Frame = -1 / -1
Query: 703 SLVDVXXXXXXXXXXXXXAFPHLKCSVLDLPHVVAGAPSDGNVQFVAGNMFESIPPATAV 524
SLVDV AFP + C+VLDLPHVV N+++VAG+MF+++PPA A+
Sbjct: 711 SLVDVGGGIGTMAKGITEAFPTMDCTVLDLPHVVFDLQGCKNLKYVAGDMFQAVPPAEAI 532
Query: 523 FLKKTLHDWGDDECVKILKNCKQAI 449
LK LH+W D++CVKILK CKQAI
Sbjct: 531 LLKWMLHNWSDEDCVKILKRCKQAI 457
Score = 53.8 bits (111), Expect(3) = 7e-035
Identities = 20/38 (52%), Positives = 30/38 (78%)
Frame = -1 / -1
Query: 343 MMAVNGVERDEQEWKKIFTEAGFKDYKILPVIGDVSVI 230
M+ V G+ER+E+EW K+F +AGF +YKI PV+G ++I
Sbjct: 342 MVVVGGMERNEKEWAKLFFDAGFLNYKIHPVLGTRALI 229
Score = 24.9 bits (48), Expect(3) = 7e-035
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = -1 / -1
Query: 370 ETQVMFDLYMMAVNG 326
ETQ+ FDL MM V G
Sbjct: 372 ETQLFFDLQMMVVVG 328
>gb|DT502488.1|DT502488 WS0133.BR_C08 PTxD-IL-FL-A-4 Populus trichocarpa x Populus
deltoides cDNA clone WS0133_C08 5', mRNA sequence
Length = 812
Score = 111 bits (236), Expect(3) = 8e-035
Identities = 46/103 (44%), Positives = 63/103 (61%)
Frame = -1 / +3
Query: 799 VNALLNKGMAADSRFLMPIVLRECGETFRGIDSLVDVXXXXXXXXXXXXXAFPHLKCSVL 620
+N L N+ MA DS +V+ +C F G+ SLVDV AFPH+ C+VL
Sbjct: 504 INNLCNEVMARDSILACKLVVNKCKGIFEGVSSLVDVGGGLGTMAKGITEAFPHMDCTVL 683
Query: 619 DLPHVVAGAPSDGNVQFVAGNMFESIPPATAVFLKKTLHDWGD 491
DLPHVV+ N++FVAG+MF+++PPA A+ LK LH+W D
Sbjct: 684 DLPHVVSDLQGCKNLKFVAGDMFQAVPPAEAILLKWILHNWSD 812
Score = 43.7 bits (89), Expect(3) = 8e-035
Identities = 18/46 (39%), Positives = 26/46 (56%)
Frame = -1 / +3
Query: 1333 IMQESSSQDLLQAHDELLHHSLCFAKSLALAVALDLRIPDAIHHHG 1196
++ E S+ +LLQA + +H F S+ L A+ L IPD I HG
Sbjct: 24 LINEESASELLQAQTHVWNHIFYFINSMTLKCAVQLGIPDVIQKHG 161
Score = 37.3 bits (75), Expect(3) = 8e-035
Identities = 14/33 (42%), Positives = 23/33 (69%)
Frame = -1 / +3
Query: 1183 TLLQILAETALHPSKLRALRRLMRVLTVTGIFS 1085
TL ++++ +HPSK + + RLMR+L +G FS
Sbjct: 171 TLSELVSALPIHPSKAQYVHRLMRILVHSGFFS 269
>gb|DN490332.1|DN490332 UK116TF06.3pR Populus apical shoot cDNA library Populus tremula x
Populus tremuloides cDNA clone UK116TF06 3', mRNA
sequence
Length = 805
Score = 124 bits (265), Expect(2) = 1e-034
Identities = 53/114 (46%), Positives = 71/114 (62%)
Frame = -1 / -3
Query: 790 LLNKGMAADSRFLMPIVLRECGETFRGIDSLVDVXXXXXXXXXXXXXAFPHLKCSVLDLP 611
+ N+ MA ++ +M +L + F I SLVDV A+PH+K LDLP
Sbjct: 803 IFNEAMACTTKIVMTAILSHYEDGFNNIRSLVDVAGGIGRNVAEIVRAYPHIKGINLDLP 624
Query: 610 HVVAGAPSDGNVQFVAGNMFESIPPATAVFLKKTLHDWGDDECVKILKNCKQAI 449
HVVA AP V VAGNMF++IP A A+F+K+ LHDW D+ CV+IL+NCK+AI
Sbjct: 623 HVVATAPKYEGVSHVAGNMFDAIPNADAIFMKRILHDWTDESCVEILRNCKKAI 462
Score = 43.2 bits (88), Expect(2) = 1e-034
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = -1 / -3
Query: 349 LYMMAVNGVERDEQEWKKIFTEAGFKDYKILPVIGDVSVI 230
++ + G ER EQEWKK+ + GF YKI+ + S+I
Sbjct: 362 MFAVTTGGKERTEQEWKKLLEDGGFARYKIIKIPALESII 243
>gb|DT505641.1|DT505641 WS01811.C21_H13 PTxD-IL-N-A-9 Populus trichocarpa x Populus
deltoides cDNA clone WS01811_H13 3', mRNA sequence
Length = 876
Score = 113 bits (242), Expect(2) = 1e-032
Identities = 48/116 (41%), Positives = 69/116 (59%)
Frame = -1 / -3
Query: 796 NALLNKGMAADSRFLMPIVLRECGETFRGIDSLVDVXXXXXXXXXXXXXAFPHLKCSVLD 617
N L+N MA D+R + ++ C + F G+ +LVDV AFP ++ D
Sbjct: 712 NRLINDAMACDARLAVSAIIESCPKLFDGLKTLVDVGGGNGTALGKFVKAFPWIEGINFD 533
Query: 616 LPHVVAGAPSDGNVQFVAGNMFESIPPATAVFLKKTLHDWGDDECVKILKNCKQAI 449
LPHVV+ A V+ V G+MF+S+P A AV++ K L DW +D+CV+ILK CK+AI
Sbjct: 532 LPHVVSVAAECEGVKQVGGDMFDSVPKADAVYIMKVLQDWNNDDCVRILKKCKEAI 365
Score = 47.3 bits (97), Expect(2) = 1e-032
Identities = 22/72 (30%), Positives = 34/72 (47%)
Frame = -1 / -3
Query: 445 PRDAGGKVIILDVVVGYKQSNIKHQETQVMFDLYMMAVNGVERDEQEWKKIFTEAGFKDY 266
P+D G +I+ V+ KQ + + + +G ER +EW + EAGF Y
Sbjct: 364 PKDKGKVIIVETVIGEEKQDSFEFVRFMKDMAMMAFTNSGKERTSEEWDCVLKEAGFSSY 185
Query: 265 KILPVIGDVSVI 230
I+P+ SVI
Sbjct: 184 NIIPIRAVQSVI 149
>gb|CV225757.1|CV225757 WS0162.B21_E24 PT-DX-A-7 Populus trichocarpa cDNA clone WS0162_E24
3', mRNA sequence
Length = 920
Score = 120 bits (256), Expect(2) = 2e-032
Identities = 49/118 (41%), Positives = 71/118 (60%)
Frame = -1 / +3
Query: 802 DVNALLNKGMAADSRFLMPIVLRECGETFRGIDSLVDVXXXXXXXXXXXXXAFPHLKCSV 623
+ N + N +A ++ +M V+ F +++LVDV A+PH+K
Sbjct: 333 EFNRIFNDALACTAKIIMRAVVSHYKGGFDDVETLVDVGGGTGGNLAEIVKAYPHIKGIN 512
Query: 622 LDLPHVVAGAPSDGNVQFVAGNMFESIPPATAVFLKKTLHDWGDDECVKILKNCKQAI 449
DLPHVVA AP+ V V GN FE+IP A ++F+K LHDWGD++CVKILKNC++A+
Sbjct: 513 FDLPHVVAAAPAYNGVSHVGGNFFEAIPNADSIFMKWVLHDWGDEDCVKILKNCRKAM 686
Score = 40.0 bits (81), Expect(2) = 2e-032
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = -1 / +3
Query: 349 LYMMAVNGVERDEQEWKKIFTEAGFKDYKILPVIGDVSVI 230
++ + G ER E EWKK+ E GF YKI+ + S+I
Sbjct: 783 MFAHSTGGKERTELEWKKLLEEGGFPRYKIINIPALPSII 902
>gb|CV239394.1|CV239394 WS0232.B21_E06 PT-MB-A-13 Populus trichocarpa cDNA clone WS0232_E06
3', mRNA sequence
Length = 709
Score = 108 bits (230), Expect(2) = 2e-030
Identities = 46/90 (51%), Positives = 58/90 (64%)
Frame = -1 / -3
Query: 718 FRGIDSLVDVXXXXXXXXXXXXXAFPHLKCSVLDLPHVVAGAPSDGNVQFVAGNMFESIP 539
F I SLVDV A+PH++ DLPHVVA AP V VAGNMFE+IP
Sbjct: 701 FNNIRSLVDVAGGIGGHVAEIVRAYPHIEGINFDLPHVVATAPKYEGVSHVAGNMFEAIP 522
Query: 538 PATAVFLKKTLHDWGDDECVKILKNCKQAI 449
A A+F+++ LHDW D+ CV+IL+NCK+AI
Sbjct: 521 NADAIFIQRILHDWTDESCVEILRNCKKAI 432
Score = 45.5 bits (93), Expect(2) = 2e-030
Identities = 17/40 (42%), Positives = 24/40 (60%)
Frame = -1 / -3
Query: 349 LYMMAVNGVERDEQEWKKIFTEAGFKDYKILPVIGDVSVI 230
++ + G ER EQEWKK+ E GF YKI+ + S+I
Sbjct: 332 MFALTTGGKERTEQEWKKLLEEGGFSRYKIIKIPALESII 213
>gb|DT489174.1|DT489174 WS02538.B21_H23 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02538_H23 3', mRNA sequence
Length = 707
Score = 108 bits (230), Expect(2) = 2e-030
Identities = 46/90 (51%), Positives = 58/90 (64%)
Frame = -1 / -3
Query: 718 FRGIDSLVDVXXXXXXXXXXXXXAFPHLKCSVLDLPHVVAGAPSDGNVQFVAGNMFESIP 539
F I SLVDV A+PH++ DLPHVVA AP V VAGNMFE+IP
Sbjct: 699 FNNIRSLVDVAGGIGGHVAEIVRAYPHIEGINFDLPHVVATAPKYEGVSHVAGNMFEAIP 520
Query: 538 PATAVFLKKTLHDWGDDECVKILKNCKQAI 449
A A+F+++ LHDW D+ CV+IL+NCK+AI
Sbjct: 519 NADAIFMQRILHDWTDESCVEILRNCKKAI 430
Score = 45.5 bits (93), Expect(2) = 2e-030
Identities = 17/40 (42%), Positives = 24/40 (60%)
Frame = -1 / -3
Query: 349 LYMMAVNGVERDEQEWKKIFTEAGFKDYKILPVIGDVSVI 230
++ + G ER EQEWKK+ E GF YKI+ + S+I
Sbjct: 330 MFALTTGGKERTEQEWKKLLEEGGFSRYKIIKIPALESII 211
>gb|CV234439.1|CV234439 WS01214.B21_O21 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01214_O21 3', mRNA sequence
Length = 702
Score = 108 bits (230), Expect(2) = 2e-030
Identities = 46/90 (51%), Positives = 58/90 (64%)
Frame = -1 / -3
Query: 718 FRGIDSLVDVXXXXXXXXXXXXXAFPHLKCSVLDLPHVVAGAPSDGNVQFVAGNMFESIP 539
F I SLVDV A+PH++ DLPHVVA AP V VAGNMFE+IP
Sbjct: 694 FNNIRSLVDVAGGIGGHVAEIVRAYPHIEGINFDLPHVVATAPKYEGVSHVAGNMFEAIP 515
Query: 538 PATAVFLKKTLHDWGDDECVKILKNCKQAI 449
A A+F+++ LHDW D+ CV+IL+NCK+AI
Sbjct: 514 NADAIFMQRILHDWTDESCVEILRNCKKAI 425
Score = 45.5 bits (93), Expect(2) = 2e-030
Identities = 17/40 (42%), Positives = 24/40 (60%)
Frame = -1 / -3
Query: 349 LYMMAVNGVERDEQEWKKIFTEAGFKDYKILPVIGDVSVI 230
++ + G ER EQEWKK+ E GF YKI+ + S+I
Sbjct: 325 MFALTTGGKERTEQEWKKLLEEGGFSRYKIIKIPALESII 206
>gb|CV240212.1|CV240212 WS0234.B21_M02 PT-MB-A-13 Populus trichocarpa cDNA clone WS0234_M02
3', mRNA sequence
Length = 673
Score = 106 bits (227), Expect(2) = 5e-030
Identities = 45/94 (47%), Positives = 59/94 (62%)
Frame = -1 / -2
Query: 718 FRGIDSLVDVXXXXXXXXXXXXXAFPHLKCSVLDLPHVVAGAPSDGNVQFVAGNMFESIP 539
F I SLVDV A+PH++ DLPHVVA AP V VAGNMFE+IP
Sbjct: 663 FNNIRSLVDVAGGIGGHVAEIVRAYPHIEGINFDLPHVVATAPKYEGVSHVAGNMFEAIP 484
Query: 538 PATAVFLKKTLHDWGDDECVKILKNCKQAISPRD 437
A A+F+++ LHDW D+ C +IL+NCK+AI ++
Sbjct: 483 NADAIFIQRILHDWTDESCAEILRNCKKAIPEKN 382
Score = 45.5 bits (93), Expect(2) = 5e-030
Identities = 17/40 (42%), Positives = 24/40 (60%)
Frame = -1 / -3
Query: 349 LYMMAVNGVERDEQEWKKIFTEAGFKDYKILPVIGDVSVI 230
++ + G ER EQEWKK+ E GF YKI+ + S+I
Sbjct: 293 MFALTTGGKERTEQEWKKLLEEGGFSRYKIIKIPALESII 174
>gb|CA933451.1|CA933451 MTU5CS.P8.C02 Aspen stem cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 614
Score = 80.8 bits (170), Expect(3) = 2e-028
Identities = 28/47 (59%), Positives = 39/47 (82%)
Frame = -1 / -3
Query: 580 NVQFVAGNMFESIPPATAVFLKKTLHDWGDDECVKILKNCKQAISPR 440
N+++VAG+MF+ +PPA A+ LK LHDW D++CVKILK CKQAI+ +
Sbjct: 555 NLKYVAGDMFQGVPPAEAILLKWMLHDWSDEDCVKILKRCKQAITSK 415
Score = 51.5 bits (106), Expect(3) = 2e-028
Identities = 19/38 (50%), Positives = 30/38 (78%)
Frame = -1 / -3
Query: 343 MMAVNGVERDEQEWKKIFTEAGFKDYKILPVIGDVSVI 230
M+A +G+ER+E+EW K+F +AGF +YKI PV+ ++I
Sbjct: 309 MVAASGMERNEEEWAKLFFDAGFLNYKIHPVLDTRALI 196
Score = 32.2 bits (64), Expect(3) = 2e-028
Identities = 15/31 (48%), Positives = 21/31 (67%)
Frame = -1 / -3
Query: 430 GKVIILDVVVGYKQSNIKHQETQVMFDLYMM 338
GKVII+D+V + + ETQ++FDL MM
Sbjct: 399 GKVIIIDMVRENQNGDEGSIETQLLFDLEMM 307
>gb|CA932285.1|CA932285 MTU5CS.P11.A06 Aspen stem cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 560
Score = 80.8 bits (170), Expect(3) = 2e-028
Identities = 28/47 (59%), Positives = 39/47 (82%)
Frame = -1 / -3
Query: 580 NVQFVAGNMFESIPPATAVFLKKTLHDWGDDECVKILKNCKQAISPR 440
N+++VAG+MF+ +PPA A+ LK LHDW D++CVKILK CKQAI+ +
Sbjct: 555 NLKYVAGDMFQGVPPAEAILLKWMLHDWSDEDCVKILKRCKQAITSK 415
Score = 51.5 bits (106), Expect(3) = 2e-028
Identities = 19/38 (50%), Positives = 30/38 (78%)
Frame = -1 / -3
Query: 343 MMAVNGVERDEQEWKKIFTEAGFKDYKILPVIGDVSVI 230
M+A +G+ER+E+EW K+F +AGF +YKI PV+ ++I
Sbjct: 309 MVAASGMERNEEEWAKLFFDAGFLNYKIHPVLDTRALI 196
Score = 32.2 bits (64), Expect(3) = 2e-028
Identities = 15/31 (48%), Positives = 21/31 (67%)
Frame = -1 / -3
Query: 430 GKVIILDVVVGYKQSNIKHQETQVMFDLYMM 338
GKVII+D+V + + ETQ++FDL MM
Sbjct: 399 GKVIIIDMVRENQNGDEGSIETQLLFDLEMM 307
>emb|AJ698925.1| Populus deltoides x Populus maximowiczii partial mRNA for putative
O-methyltransferase
Length = 453
Score = 73.5 bits (154), Expect(3) = 4e-027
Identities = 26/39 (66%), Positives = 33/39 (84%)
Frame = -1 / +1
Query: 565 AGNMFESIPPATAVFLKKTLHDWGDDECVKILKNCKQAI 449
AG+MF+++PPA A+ LK LHDW D++CVKILK CKQAI
Sbjct: 1 AGDMFQAVPPAEAILLKCILHDWSDEDCVKILKRCKQAI 117
Score = 53.3 bits (110), Expect(3) = 4e-027
Identities = 21/38 (55%), Positives = 30/38 (78%)
Frame = -1 / +1
Query: 343 MMAVNGVERDEQEWKKIFTEAGFKDYKILPVIGDVSVI 230
M+ V+GVER+E+EW K+F ++GF +YKI PV G +VI
Sbjct: 232 MVVVSGVERNEKEWAKLFFDSGFLNYKIHPVPGTRAVI 345
Score = 33.6 bits (67), Expect(3) = 4e-027
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = -1 / +1
Query: 430 GKVIILDVVVGYKQSNIKHQETQVMFDLYMMAV 332
GKVII+D+V + + ETQ++FDL MM V
Sbjct: 142 GKVIIIDMVRENQNGDEGSIETQLIFDLAMMVV 240
>gb|CK099728.1|CK099728 A082P19.5pR Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA clone A082P19 5', mRNA sequence
Length = 374
Score = 122 bits (260), Expect = 7e-027
Identities = 50/111 (45%), Positives = 68/111 (61%)
Frame = -1 / +1
Query: 799 VNALLNKGMAADSRFLMPIVLRECGETFRGIDSLVDVXXXXXXXXXXXXXAFPHLKCSVL 620
+N L N+ MA DS +VL +C F G+ SLVDV AFPH+ C+V
Sbjct: 37 LNNLFNEAMARDSILASKLVLFKCKGIFEGVSSLVDVGGGLGTMAKGIAEAFPHMDCTVF 216
Query: 619 DLPHVVAGAPSDGNVQFVAGNMFESIPPATAVFLKKTLHDWGDDECVKILK 467
DLP+VV+ N+++V G+MF+ +PPA A+ LK LHDW D++CVKILK
Sbjct: 217 DLPNVVSDLQGCKNLKYVGGDMFQGVPPAEAILLKWVLHDWSDEDCVKILK 369
>gb|CN523142.1|CN523142 GQ015M01.B3_G24 GQ015 Populus trichocarpa x Populus deltoides cDNA
clone GQ015M01_G24 5', mRNA sequence
Length = 728
Score = 120 bits (256), Expect = 3e-026
Identities = 49/118 (41%), Positives = 71/118 (60%)
Frame = -1 / +1
Query: 802 DVNALLNKGMAADSRFLMPIVLRECGETFRGIDSLVDVXXXXXXXXXXXXXAFPHLKCSV 623
+ N + N +A ++ +M V+ F +++LVDV A+PH+K
Sbjct: 235 EFNRIFNDALACTAKIIMRAVVSHYKGGFDDVETLVDVGGGTGGNLAEIVKAYPHIKGIN 414
Query: 622 LDLPHVVAGAPSDGNVQFVAGNMFESIPPATAVFLKKTLHDWGDDECVKILKNCKQAI 449
DLPHVVA AP+ V V GN FE+IP A ++F+K LHDWGD++CVKILKNC++A+
Sbjct: 415 FDLPHVVAAAPAYNGVSHVGGNFFEAIPNADSIFMKWVLHDWGDEDCVKILKNCRKAM 588
>gb|CV234783.1|CV234783 WS01216.B21_E17 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01216_E17 3', mRNA sequence
Length = 633
Score = 78.0 bits (164), Expect(3) = 4e-026
Identities = 27/44 (61%), Positives = 38/44 (86%)
Frame = -1 / -1
Query: 580 NVQFVAGNMFESIPPATAVFLKKTLHDWGDDECVKILKNCKQAI 449
N+++VAG+MF+++PPA A+ LK LH+W D++CVKILK CKQAI
Sbjct: 588 NLKYVAGDMFQAVPPAEAILLKWMLHNWSDEDCVKILKRCKQAI 457
Score = 53.8 bits (111), Expect(3) = 4e-026
Identities = 20/38 (52%), Positives = 30/38 (78%)
Frame = -1 / -1
Query: 343 MMAVNGVERDEQEWKKIFTEAGFKDYKILPVIGDVSVI 230
M+ V G+ER+E+EW K+F +AGF +YKI PV+G ++I
Sbjct: 342 MVVVGGMERNEKEWAKLFFDAGFLNYKIHPVLGTRALI 229
Score = 24.9 bits (48), Expect(3) = 4e-026
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = -1 / -1
Query: 370 ETQVMFDLYMMAVNG 326
ETQ+ FDL MM V G
Sbjct: 372 ETQLFFDLQMMVVVG 328
>gb|AJ771700.1|AJ771700 AJ771700 Populus euphratica root 3-6 months Populus euphratica cDNA
clone P0001600004F04F1, mRNA sequence
Length = 632
Score = 113 bits (242), Expect = 2e-024
Identities = 48/116 (41%), Positives = 69/116 (59%)
Frame = -1 / +3
Query: 796 NALLNKGMAADSRFLMPIVLRECGETFRGIDSLVDVXXXXXXXXXXXXXAFPHLKCSVLD 617
N L+N MA D+R + ++ C + F G+ +LVDV AFP ++ D
Sbjct: 126 NRLINDAMACDARLAVSAIIESCPKLFDGLKTLVDVGGGNGTALGKFVKAFPWIEGINFD 305
Query: 616 LPHVVAGAPSDGNVQFVAGNMFESIPPATAVFLKKTLHDWGDDECVKILKNCKQAI 449
LPHVV+ A V+ V G+MF+S+P A AVF+ K L DW +D+CV+IL+ CK+AI
Sbjct: 306 LPHVVSVAAECEGVKQVGGDMFDSVPKADAVFIMKVLQDWNNDDCVRILRKCKEAI 473
>gb|CX659487.1|CX659487 PO01031C05 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO01031C05 5', mRNA sequence
Length = 621
Score = 94.1 bits (199), Expect(2) = 4e-024
Identities = 36/66 (54%), Positives = 46/66 (69%)
Frame = -1 / +3
Query: 646 FPHLKCSVLDLPHVVAGAPSDGNVQFVAGNMFESIPPATAVFLKKTLHDWGDDECVKILK 467
FP ++ DLPHVV+ AP VQ V G+ F+S+P A A FL LHDW D+EC++ILK
Sbjct: 51 FPCIQGINFDLPHVVSAAPESEGVQHVGGDFFQSVPKADAAFLMWVLHDWNDEECIQILK 230
Query: 466 NCKQAI 449
NCK+AI
Sbjct: 231 NCKEAI 248
Score = 38.2 bits (77), Expect(2) = 4e-024
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = -1 / +3
Query: 328 GVERDEQEWKKIFTEAGFKDYKILPVIGDVSVII 227
G ER +EW+ + EAGF Y I P+ SVI+
Sbjct: 366 GKERTSKEWEYVLKEAGFSSYTIKPIRAVQSVIV 467
>gb|CX659497.1|CX659497 PO01031D04 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO01031D04 5', mRNA sequence
Length = 621
Score = 94.1 bits (199), Expect(2) = 4e-024
Identities = 36/66 (54%), Positives = 46/66 (69%)
Frame = -1 / +3
Query: 646 FPHLKCSVLDLPHVVAGAPSDGNVQFVAGNMFESIPPATAVFLKKTLHDWGDDECVKILK 467
FP ++ DLPHVV+ AP VQ V G+ F+S+P A A FL LHDW D+EC++ILK
Sbjct: 51 FPCIQGINFDLPHVVSAAPESEGVQHVGGDFFQSVPKADAAFLMWVLHDWNDEECIQILK 230
Query: 466 NCKQAI 449
NCK+AI
Sbjct: 231 NCKEAI 248
Score = 38.2 bits (77), Expect(2) = 4e-024
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = -1 / +3
Query: 328 GVERDEQEWKKIFTEAGFKDYKILPVIGDVSVII 227
G ER +EW+ + EAGF Y I P+ SVI+
Sbjct: 366 GKERTSKEWEYVLKEAGFSSYTIKPIRAVQSVIV 467
>gb|CX659511.1|CX659511 PO01031E10 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO01031E10 5', mRNA sequence
Length = 621
Score = 94.1 bits (199), Expect(2) = 4e-024
Identities = 36/66 (54%), Positives = 46/66 (69%)
Frame = -1 / +3
Query: 646 FPHLKCSVLDLPHVVAGAPSDGNVQFVAGNMFESIPPATAVFLKKTLHDWGDDECVKILK 467
FP ++ DLPHVV+ AP VQ V G+ F+S+P A A FL LHDW D+EC++ILK
Sbjct: 51 FPCIQGINFDLPHVVSAAPESEGVQHVGGDFFQSVPKADAAFLMWVLHDWNDEECIQILK 230
Query: 466 NCKQAI 449
NCK+AI
Sbjct: 231 NCKEAI 248
Score = 38.2 bits (77), Expect(2) = 4e-024
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = -1 / +3
Query: 328 GVERDEQEWKKIFTEAGFKDYKILPVIGDVSVII 227
G ER +EW+ + EAGF Y I P+ SVI+
Sbjct: 366 GKERTSKEWEYVLKEAGFSSYTIKPIRAVQSVIV 467
>gb|DT484406.1|DT484406 WS02525.B21_F04 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02525_F04 3', mRNA sequence
Length = 734
Score = 95.0 bits (201), Expect(2) = 4e-023
Identities = 39/92 (42%), Positives = 54/92 (58%)
Frame = -1 / -3
Query: 790 LLNKGMAADSRFLMPIVLRECGETFRGIDSLVDVXXXXXXXXXXXXXAFPHLKCSVLDLP 611
L N+ MA+DS +VL +C F G+DSLVDV AFPH+ C+V DLP
Sbjct: 384 LFNEAMASDSILASKLVLNQCKGIFDGVDSLVDVGGGSGTMAKGIAEAFPHMDCTVFDLP 205
Query: 610 HVVAGAPSDGNVQFVAGNMFESIPPATAVFLK 515
VV+ N+++V G+MFE++PPA + LK
Sbjct: 204 RVVSDLQGSKNLKYVGGDMFEAVPPADVILLK 109
Score = 37.3 bits (75), Expect(2) = 4e-023
Identities = 14/33 (42%), Positives = 23/33 (69%)
Frame = -1 / -3
Query: 1183 TLLQILAETALHPSKLRALRRLMRVLTVTGIFS 1085
TL ++++ +HPSK + + RLMR+L +G FS
Sbjct: 714 TLSELVSALPIHPSKAQYVHRLMRILVHSGFFS 616
>gb|DT501087.1|DT501087 WS0131.BR_H01 PTxD-IL-FL-A-4 Populus trichocarpa x Populus
deltoides cDNA clone WS0131_H01 5', mRNA sequence
Length = 736
Score = 69.3 bits (145), Expect(3) = 2e-022
Identities = 31/77 (40%), Positives = 42/77 (54%)
Frame = -1 / +3
Query: 799 VNALLNKGMAADSRFLMPIVLRECGETFRGIDSLVDVXXXXXXXXXXXXXAFPHLKCSVL 620
+N L N+ MA DS +V+ +C F G+ SLVDV AFPH+ C+VL
Sbjct: 504 INNLCNEVMARDSILACKLVVNKCKGIFEGVSSLVDVGGGLGTMAKGITEAFPHMDCTVL 683
Query: 619 DLPHVVAGAPSDGNVQF 569
DLPHVV+ N++F
Sbjct: 684 DLPHVVSDLQGCKNLKF 734
Score = 42.8 bits (87), Expect(3) = 2e-022
Identities = 18/46 (39%), Positives = 26/46 (56%)
Frame = -1 / +3
Query: 1333 IMQESSSQDLLQAHDELLHHSLCFAKSLALAVALDLRIPDAIHHHG 1196
++ E S+ +LLQA + +H F S+ L A+ L IPD I HG
Sbjct: 24 LINELSASELLQAQTHVWNHIFYFINSMTLKCAVQLGIPDVIQKHG 161
Score = 37.3 bits (75), Expect(3) = 2e-022
Identities = 14/33 (42%), Positives = 23/33 (69%)
Frame = -1 / +3
Query: 1183 TLLQILAETALHPSKLRALRRLMRVLTVTGIFS 1085
TL ++++ +HPSK + + RLMR+L +G FS
Sbjct: 171 TLSELVSALPIHPSKAQYVHRLMRILVHSGFFS 269
>gb|AI165359.1|AI165359 A082p19u Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA 5', mRNA sequence
Length = 324
Score = 80.3 bits (169), Expect(2) = 9e-022
Identities = 34/84 (40%), Positives = 48/84 (57%)
Frame = -1 / +2
Query: 766 DSRFLMPIVLRECGETFRGIDSLVDVXXXXXXXXXXXXXAFPHLKCSVLDLPHVVAGAPS 587
DS +VL +C F G+ SLVDV AFPH+ C+V DLP+VV+
Sbjct: 2 DSILASKLVLFKCKGIFEGVSSLVDVGGGLGTMAKGIAEAFPHMDCTVFDLPNVVSDLQG 181
Query: 586 DGNVQFVAGNMFESIPPATAVFLK 515
N+++V G+MF+ +PPA A+ LK
Sbjct: 182 CKNLKYVGGDMFQGVPPAEAILLK 253
Score = 44.1 bits (90), Expect(2) = 9e-022
Identities = 15/25 (60%), Positives = 19/25 (76%)
Frame = -1 / +1
Query: 523 FLKKTLHDWGDDECVKILKNCKQAI 449
F + LHDW D++CV ILK C+QAI
Sbjct: 244 FTQVGLHDWSDEDCVXILKRCRQAI 318
>emb|A26486.1| Poplar pOMT1.A/pOMT1.B combined sequence
Length = 1244
Score = 95.5 bits (202), Expect(2) = 6e-021
Identities = 37/90 (41%), Positives = 52/90 (57%)
Frame = -1 / +1
Query: 718 FRGIDSLVDVXXXXXXXXXXXXXAFPHLKCSVLDLPHVVAGAPSDGNVQFVAGNMFESIP 539
F G++S+VDV P +K DLPHV+ AP+ V+ V G+MF S+P
Sbjct: 442 FEGLNSIVDVGGGTGATVNMIVSKHPSIKGINFDLPHVIGDAPAYPGVEHVGGDMFASVP 621
Query: 538 PATAVFLKKTLHDWGDDECVKILKNCKQAI 449
A A+F+K HDW D+ C+K LKNC +A+
Sbjct: 622 KADAIFMKWICHDWSDEHCLKFLKNCYEAL 711
Score = 26.3 bits (51), Expect(2) = 6e-021
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = -3 / +3
Query: 446 STGCRWEGNNLG 411
ST C+WEG+N G
Sbjct: 705 STTCKWEGDNSG 740
Database: Populus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:49 PM
Number of letters in database: 203,408,664
Number of sequences in database: 369,679
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 642,791,352
Number of Sequences: 369679
Number of extensions: 8491281
Number of successful extensions: 44477
Number of sequences better than 1.0e-020: 40
length of database: 67,802,888
effective HSP length: 54
effective length of database: 47,840,222
effective search space used: 20188573684
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)