TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3070863.2.1
(992 letters)
Database: Populus_nucl_with_EST.fasta
369,679 sequences; 203,408,664 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CV236179.1|CV236179 WS01223.B21_C07 PT-GT-FL-A-3 Populus... 386 e-107
gb|CV275990.1|CV275990 WS0178.B21.1_E09 PTxD-NR-A-8 Populus... 384 e-106
gb|DT503570.1|DT503570 WS0137.BR_B15 PTxD-IL-FL-A-4 Populus... 332 2e-090
gb|BU878685.1|BU878685 V050C06 Populus flower cDNA library ... 321 4e-087
gb|CK090453.1|CK090453 F006P03.3pR Populus flower cDNA libr... 138 4e-084
gb|CV248271.1|CV248271 WS01120.B21_B05 PT-P-FL-A-2 Populus ... 281 4e-075
gb|DT495302.1|DT495302 WS01120.BR_B05 PT-P-FL-A-2 Populus t... 281 4e-075
gb|DN494002.1|DN494002 I058P10.5pR Populus senescing leaves... 272 2e-072
gb|CV237987.1|CV237987 WS0124.B21_N16 PT-GT-FL-A-3 Populus ... 264 6e-070
gb|CV280631.1|CV280631 WS0137.B21_B15 PTxD-IL-FL-A-4 Populu... 231 5e-060
gb|DT493154.1|DT493154 WS02553.C21_I23 PT-MB-N-A-15 Populus... 104 5e-056
gb|DT490757.1|DT490757 WS02545.B21_N20 PT-MB-N-A-15 Populus... 171 8e-053
gb|CA824495.1|CA824495 R43E01 two-month-old roots from clon... 199 2e-050
gb|BI119836.1|BI119836 F006P03Y Populus flower cDNA library... 153 2e-036
gb|AJ771658.1|AJ771658 AJ771658 Populus euphratica root 3-6... 151 5e-036
gb|DN484560.1|DN484560 I058P10.3pR Populus senescing leaves... 132 3e-030
gb|CA929160.1|CA929160 MTU2CA.P8.G04 Aspen apex cDNA Librar... 128 4e-029
>gb|CV236179.1|CV236179 WS01223.B21_C07 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01223_C07 3', mRNA sequence
Length = 861
Score = 386 bits (838), Expect = e-107
Identities = 164/249 (65%), Positives = 192/249 (77%)
Frame = +1 / -1
Query: 70 RRLEGKVAIVTASTMGIGLAIAERLGLEGAAVVISSRKQKNVNEAVEGLRAKGITAVGAV 249
+R EGKV IVTAST GIG +IAER GLEGA+VVISSRKQKNV+EA E L+AKGI +G V
Sbjct: 786 KRFEGKVVIVTASTQGIGFSIAERFGLEGASVVISSRKQKNVDEAAEKLKAKGIKVLGVV 607
Query: 250 CHVSDAQQRKSLIETAVKSFGHIDILVSNAAANPSVDSILEMKESVLDKLWDINVKASIL 429
CHVS+AQQRK+LIET V+ +G IDI+VSNAA NPS DSILE +ESVLDKLW+INVKA+IL
Sbjct: 606 CHVSNAQQRKNLIETTVQKYGKIDIVVSNAAVNPSTDSILETQESVLDKLWEINVKAAIL 427
Query: 430 LIQDAAPHLRKGXXXXXXXXXAGYNPEQGLTMYGVTKTALFGLTKALAGEMGPDTRVNCI 609
L++DA PH++KG GY+P + MYGVTKTALFGLTK LA EM P TRVNCI
Sbjct: 426 LLKDATPHMKKGSSVILISSIGGYHPHSSMAMYGVTKTALFGLTKVLAAEMAPHTRVNCI 247
Query: 610 APGFVPTRFASFLTENETIRKELNERTKLKRLGTVEDMXXXXXXXXXXXXXYITAETIVV 789
APGFVPT FA F+T N+TIRK + ++T LKRLGT +DM YIT ET+VV
Sbjct: 246 APGFVPTHFADFITGNQTIRKTIEDQTLLKRLGTTDDMASAVAFLASDDASYITGETLVV 67
Query: 790 AGGVQSRL* 816
AGG+ SRL*
Sbjct: 66 AGGMPSRL* 40
Score = 196 bits (423), Expect(3) = 2e-053
Identities = 95/161 (59%), Positives = 107/161 (66%)
Frame = -1 / +2
Query: 644 KLANRVGTKPGAIQLTRVSGPISPARAFVRPKRAVFVTPYIVNPCSGL*PAIEEIIITDD 465
K A VGT PGAIQ TRV G IS A V PKRAVFVTPYI G *P IEEI IT++
Sbjct: 212 KSAKCVGTNPGAIQFTRV*GAISAASTLVSPKRAVFVTPYIAMEECGW*PPIEEIRITEE 391
Query: 464 PFXXXXXXXXXXXIEALTLISHSLSRTDSFISSMLSTEGFAAALETRISMCPKLLTAVSM 285
PF I ALTLISHSLSRTDS++S M S +G AAL+T +S+ P T VSM
Sbjct: 392 PFFM*GVASFSRRIAALTLISHSLSRTDSWVSKMESVDGLTAALDTTMSIFPYFCTVVSM 571
Query: 284 RLLRCCASETWQTAPTAVIPLALSPSTASFTFFCLREEMTT 162
R CCA +T QT P ++PLALS S AS TFFCLREE+TT
Sbjct: 572 RFFLCCAFDT*QTTPNTLMPLALSFSAASSTFFCLREEITT 694
Score = 150 bits (323), Expect = 1e-035
Identities = 75/188 (39%), Positives = 98/188 (52%)
Frame = +3 / -3
Query: 243 CRLPRLRRTAAQEPHRDGRQELWAHRYSCLQCCRKSFCR*HT*NERVCSR*AVGY*RQGF 422
C L R++ T +E HRD E+W R+ C+QCC +S R H N +C *AVG *
Sbjct: 613 CCLSRIKCTTEEESHRDYCTEIWKDRHCCIQCCCQSIYRFHFGNPGICP**AVGN*C*SS 434
Query: 423 YPSYSGCCSSPTEGVICDYYFFNCWLQSRTRIDNVWCHKDCSLWSHEGSCW*DGTRYSC* 602
YP GC S EG F WL S VWCHKD W+++G+C *+G+ +S
Sbjct: 433 YPPTEGCDPSHEEGFFSYSDFLYWWLPSTFFHGYVWCHKDSPFWAYQGACS*NGSSHSSE 254
Query: 603 LYSPWFCSYTVC*FPHRK*DH*ERA*REDQA*EIGYCGRHGCGCGFSGV*RRIIHYG*NH 782
LYS W C+ T+C*F +R+ DH*+ * D A*+ + RHG G +H N
Sbjct: 253 LYSSWVCTNTLC*FHYRQSDH*KDD*GSDLA*KAWHHRRHGLSSRLFGFR*CFLHNRRNF 74
Query: 783 CCCWRGAV 806
WR AV
Sbjct: 73 GGSWRDAV 50
Score = 91.3 bits (193), Expect(2) = 5e-034
Identities = 41/103 (39%), Positives = 55/103 (53%)
Frame = -3 / +1
Query: 801 HPSSNNNGFSRNV*CVVRRQKSRSRSHVFHSTQSLKLGPLVKLFPNGLIFCEETSKPCRN 622
HPSS + FS V ++ QK HV + K G ++ NGLI C E SK C
Sbjct: 55 HPSSYHQSFSCYVRSIIGSQKGDC*GHVVCGAKPFKQGLILNRLSNGLIACNEISKVCWY 234
Query: 621 KTRGYTVNTSIGSHLTSKSLRETKESSLCDTIHCQSLFWIVTS 493
K R YTV++S+ SH + K L + K+ LCDTIH W+V +
Sbjct: 235 KPRSYTVHSSVRSHFSCKHLGKPKKGCLCDTIHSHGRMWMVAT 363
Score = 73.9 bits (155), Expect(2) = 5e-034
Identities = 42/131 (32%), Positives = 62/131 (47%)
Frame = -3 / +1
Query: 453 VRSSILNKKDRSLDVNIPQLIENRLFHFKYAIYRRICGSIGDKNIYVPKALDGRLDEALA 274
VR IL +D ++N PQLI++R F+ I R I SIG N+Y+ L L E L
Sbjct: 403 VRGRILQ*EDSCFNINFPQLIKDRFLGFQNGICRWIDSSIGYNNVYLSIFLYSSLYEILP 582
Query: 273 LLCVGDVADGTNRGDTLGPEPLHRLVHVXXXXXXXXXXXXLQTEALGDGEADPHRGRRHD 94
LLC+ V D T D E L L+++ Q++ L G+A+ H+
Sbjct: 583 LLCI*YVTDNTQHFDAFSFEFLSCLIYIFLLARRDNNRSTFQSKPLSYGKANTLS*SGHN 762
Query: 93 GHLPLQTPALD 61
H P ++ + D
Sbjct: 763 YHFPFKSLSTD 795
Score = 29.5 bits (58), Expect(3) = 2e-053
Identities = 15/37 (40%), Positives = 17/37 (45%)
Frame = -1 / +2
Query: 812 SLDCTPPATTMVSAVMYDXXXXXXXXXXXXXXSTVPN 702
SLD PPATT VS VM + S VP+
Sbjct: 44 SLDGIPPATTKVSPVM*EASSEAKKATAEAMSSVVPS 154
Score = 22.1 bits (42), Expect(3) = 2e-053
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = -1 / +2
Query: 110 VDAVTMATFPS 78
V+AVT+ TFPS
Sbjct: 746 VEAVTITTFPS 778
>gb|CV275990.1|CV275990 WS0178.B21.1_E09 PTxD-NR-A-8 Populus trichocarpa x Populus
deltoides cDNA clone WS0178_E09 3', mRNA sequence
Length = 881
Score = 384 bits (833), Expect = e-106
Identities = 162/249 (65%), Positives = 192/249 (77%)
Frame = +1 / +3
Query: 70 RRLEGKVAIVTASTMGIGLAIAERLGLEGAAVVISSRKQKNVNEAVEGLRAKGITAVGAV 249
+R EGKV IVTAST GIG +IAER GLEGA+VVISSRKQKNV+EA E L+AKGI +G V
Sbjct: 57 KRFEGKVVIVTASTQGIGFSIAERFGLEGASVVISSRKQKNVDEAAEKLKAKGIKVLGVV 236
Query: 250 CHVSDAQQRKSLIETAVKSFGHIDILVSNAAANPSVDSILEMKESVLDKLWDINVKASIL 429
CHVS+AQQRK+LIET V+ +G IDI+VSNAA NPS DSILE +ESVLDKLW+INVKA+IL
Sbjct: 237 CHVSNAQQRKNLIETTVQKYGKIDIVVSNAAVNPSTDSILETQESVLDKLWEINVKAAIL 416
Query: 430 LIQDAAPHLRKGXXXXXXXXXAGYNPEQGLTMYGVTKTALFGLTKALAGEMGPDTRVNCI 609
L++DA PH++KG GY+P + MYGVTKTALFGLTK LA EM P TRVNCI
Sbjct: 417 LLKDATPHMKKGSSVILISSIGGYHPHSSMAMYGVTKTALFGLTKVLAAEMAPHTRVNCI 596
Query: 610 APGFVPTRFASFLTENETIRKELNERTKLKRLGTVEDMXXXXXXXXXXXXXYITAETIVV 789
APGFVPT FA F+T N+T+RK + ++T L+RLGT +DM YIT ET+VV
Sbjct: 597 APGFVPTHFADFITGNQTVRKTIEDQTLLQRLGTTDDMASAVAFLASDDASYITGETLVV 776
Query: 790 AGGVQSRL* 816
AGG+ SRL*
Sbjct: 777 AGGMPSRL* 803
Score = 196 bits (423), Expect(3) = 7e-054
Identities = 95/161 (59%), Positives = 107/161 (66%)
Frame = -1 / -2
Query: 644 KLANRVGTKPGAIQLTRVSGPISPARAFVRPKRAVFVTPYIVNPCSGL*PAIEEIIITDD 465
K A VGT PGAIQ TRV G IS A V PKRAVFVTPYI G *P IEEI IT++
Sbjct: 631 KSAKCVGTNPGAIQFTRV*GAISAASTLVSPKRAVFVTPYIAMEECGW*PPIEEIRITEE 452
Query: 464 PFXXXXXXXXXXXIEALTLISHSLSRTDSFISSMLSTEGFAAALETRISMCPKLLTAVSM 285
PF I ALTLISHSLSRTDS++S M S +G AAL+T +S+ P T VSM
Sbjct: 451 PFFM*GVASFSRRIAALTLISHSLSRTDSWVSKMESVDGLTAALDTTMSIFPYFCTVVSM 272
Query: 284 RLLRCCASETWQTAPTAVIPLALSPSTASFTFFCLREEMTT 162
R CCA +T QT P ++PLALS S AS TFFCLREE+TT
Sbjct: 271 RFFLCCAFDT*QTTPNTLMPLALSFSAASSTFFCLREEITT 149
Score = 146 bits (313), Expect = 2e-034
Identities = 74/188 (39%), Positives = 96/188 (51%)
Frame = +3 / +2
Query: 243 CRLPRLRRTAAQEPHRDGRQELWAHRYSCLQCCRKSFCR*HT*NERVCSR*AVGY*RQGF 422
C L R++ T +E HRD E+W R+ C+QCC +S R H N +C R*AVG *
Sbjct: 230 CCLSRIKCTTEEESHRDYCTEIWKDRHCCIQCCCQSIYRFHFGNPGICPR*AVGN*C*SS 409
Query: 423 YPSYSGCCSSPTEGVICDYYFFNCWLQSRTRIDNVWCHKDCSLWSHEGSCW*DGTRYSC* 602
YP GC S EG F WL S VWCHKD W+++G+C *DG+ +S
Sbjct: 410 YPPTEGCDPSHEEGFFSYSDFLYWWLPSTFFHGYVWCHKDSPFWAYQGACS*DGSSHSSE 589
Query: 603 LYSPWFCSYTVC*FPHRK*DH*ERA*REDQA*EIGYCGRHGCGCGFSGV*RRIIHYG*NH 782
LYS C+ T+C*F +R+ D *E * D + + RHG G ++H N
Sbjct: 590 LYSSRVCTNTLC*FHYRQSDR*EDD*GSDLTSKAWHHRRHGLSSRLFGFR*CVLHNRRNF 769
Query: 783 CCCWRGAV 806
WR AV
Sbjct: 770 GGSWRDAV 793
Score = 93.6 bits (198), Expect(2) = 3e-035
Identities = 43/103 (41%), Positives = 57/103 (55%)
Frame = -3 / -1
Query: 801 HPSSNNNGFSRNV*CVVRRQKSRSRSHVFHSTQSLKLGPLVKLFPNGLIFCEETSKPCRN 622
HPSS + FS V ++ QK HV + LK G ++ PNGLI C E SK C
Sbjct: 788 HPSSYHQSFSCYVRRIIGSQKGDC*GHVVCGAKPLK*GLILNRLPNGLIACNEISKVCWY 609
Query: 621 KTRGYTVNTSIGSHLTSKSLRETKESSLCDTIHCQSLFWIVTS 493
K YTV++S+ SHL+ K L + K+ LCDTIH W+V +
Sbjct: 608 KPGSYTVHSSVRSHLSCKHLGKPKKGCLCDTIHSHGRMWMVAT 480
Score = 75.8 bits (159), Expect(2) = 3e-035
Identities = 43/131 (32%), Positives = 62/131 (47%)
Frame = -3 / -1
Query: 453 VRSSILNKKDRSLDVNIPQLIENRLFHFKYAIYRRICGSIGDKNIYVPKALDGRLDEALA 274
VR IL +D ++N PQLIE+R F+ I R I SIG N+Y+ L L E L
Sbjct: 440 VRGRILQ*EDSCFNINFPQLIEDRFLGFQNGICRWIDSSIGYNNVYLSIFLYSSLYEILP 261
Query: 273 LLCVGDVADGTNRGDTLGPEPLHRLVHVXXXXXXXXXXXXLQTEALGDGEADPHRGRRHD 94
LLC+ V D T D E L L+++ Q++ L G+A+ H+
Sbjct: 260 LLCI*YVTDNTQHFDAFSFEFLSCLIYIFLLARRDNNRSTFQSKPLSYGKANTLS*SGHN 81
Query: 93 GHLPLQTPALD 61
H P ++ + D
Sbjct: 80 YHFPFKSLSTD 48
Score = 31.3 bits (62), Expect(3) = 7e-054
Identities = 16/37 (43%), Positives = 17/37 (45%)
Frame = -1 / -2
Query: 812 SLDCTPPATTMVSAVMYDXXXXXXXXXXXXXXSTVPN 702
SLD PPATT VS VM D S VP+
Sbjct: 799 SLDGIPPATTKVSPVM*DASSEAKKATAEAMSSVVPS 689
Score = 22.1 bits (42), Expect(3) = 7e-054
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = -1 / -2
Query: 110 VDAVTMATFPS 78
V+AVT+ TFPS
Sbjct: 97 VEAVTITTFPS 65
>gb|DT503570.1|DT503570 WS0137.BR_B15 PTxD-IL-FL-A-4 Populus trichocarpa x Populus
deltoides cDNA clone WS0137_B15 5', mRNA sequence
Length = 795
Score = 332 bits (719), Expect = 2e-090
Identities = 139/218 (63%), Positives = 166/218 (76%)
Frame = +1 / +3
Query: 163 VVISSRKQKNVNEAVEGLRAKGITAVGAVCHVSDAQQRKSLIETAVKSFGHIDILVSNAA 342
VVISSRKQKNV+EA E L+AKGI +G VCHVS+AQQRK+LIET V+ +G IDI+VSNAA
Sbjct: 3 VVISSRKQKNVDEAAEKLKAKGIKVLGVVCHVSNAQQRKNLIETTVQKYGKIDIVVSNAA 182
Query: 343 ANPSVDSILEMKESVLDKLWDINVKASILLIQDAAPHLRKGXXXXXXXXXAGYNPEQGLT 522
NPS DSILE +ESVLDKLW+INVKA+ILL++DA PH++KG GY+P +
Sbjct: 183 VNPSTDSILETQESVLDKLWEINVKAAILLLKDATPHMKKGSSVILISSIGGYHPHSSMA 362
Query: 523 MYGVTKTALFGLTKALAGEMGPDTRVNCIAPGFVPTRFASFLTENETIRKELNERTKLKR 702
MYGVTKTALFGLTK LA EM P TRVNCIAPGFVPT FA F+T N+T+RK + ++T L+R
Sbjct: 363 MYGVTKTALFGLTKVLAAEMAPHTRVNCIAPGFVPTHFADFITGNQTVRKTIEDQTLLQR 542
Query: 703 LGTVEDMXXXXXXXXXXXXXYITAETIVVAGGVQSRL* 816
LGT +DM YIT ET+VVAGG+ SRL*
Sbjct: 543 LGTTDDMASAVAFLASDDASYITGETLVVAGGMPSRL* 656
Score = 196 bits (423), Expect(2) = 8e-053
Identities = 95/161 (59%), Positives = 107/161 (66%)
Frame = -1 / -3
Query: 644 KLANRVGTKPGAIQLTRVSGPISPARAFVRPKRAVFVTPYIVNPCSGL*PAIEEIIITDD 465
K A VGT PGAIQ TRV G IS A V PKRAVFVTPYI G *P IEEI IT++
Sbjct: 484 KSAKCVGTNPGAIQFTRV*GAISAASTLVSPKRAVFVTPYIAMEECGW*PPIEEIRITEE 305
Query: 464 PFXXXXXXXXXXXIEALTLISHSLSRTDSFISSMLSTEGFAAALETRISMCPKLLTAVSM 285
PF I ALTLISHSLSRTDS++S M S +G AAL+T +S+ P T VSM
Sbjct: 304 PFFM*GVASFSRRIAALTLISHSLSRTDSWVSKMESVDGLTAALDTTMSIFPYFCTVVSM 125
Query: 284 RLLRCCASETWQTAPTAVIPLALSPSTASFTFFCLREEMTT 162
R CCA +T QT P ++PLALS S AS TFFCLREE+TT
Sbjct: 124 RFFLCCAFDT*QTTPNTLMPLALSFSAASSTFFCLREEITT 2
Score = 146 bits (313), Expect = 2e-034
Identities = 74/188 (39%), Positives = 96/188 (51%)
Frame = +3 / +2
Query: 243 CRLPRLRRTAAQEPHRDGRQELWAHRYSCLQCCRKSFCR*HT*NERVCSR*AVGY*RQGF 422
C L R++ T +E HRD E+W R+ C+QCC +S R H N +C R*AVG *
Sbjct: 83 CCLSRIKCTTEEESHRDYCTEIWKDRHCCIQCCCQSIYRFHFGNPGICPR*AVGN*C*SS 262
Query: 423 YPSYSGCCSSPTEGVICDYYFFNCWLQSRTRIDNVWCHKDCSLWSHEGSCW*DGTRYSC* 602
YP GC S EG F WL S VWCHKD W+++G+C *DG+ +S
Sbjct: 263 YPPTEGCDPSHEEGFFSYSDFLYWWLPSTFFHGYVWCHKDSPFWAYQGACS*DGSSHSSE 442
Query: 603 LYSPWFCSYTVC*FPHRK*DH*ERA*REDQA*EIGYCGRHGCGCGFSGV*RRIIHYG*NH 782
LYS C+ T+C*F +R+ D *E * D + + RHG G ++H N
Sbjct: 443 LYSSRVCTNTLC*FHYRQSDR*EDD*GSDLTSKAWHHRRHGLSSRLFGFR*CVLHNRRNF 622
Query: 783 CCCWRGAV 806
WR AV
Sbjct: 623 GGSWRDAV 646
Score = 93.6 bits (198), Expect(2) = 4e-032
Identities = 43/103 (41%), Positives = 57/103 (55%)
Frame = -3 / -2
Query: 801 HPSSNNNGFSRNV*CVVRRQKSRSRSHVFHSTQSLKLGPLVKLFPNGLIFCEETSKPCRN 622
HPSS + FS V ++ QK HV + LK G ++ PNGLI C E SK C
Sbjct: 641 HPSSYHQSFSCYVRRIIGSQKGDC*GHVVCGAKPLK*GLILNRLPNGLIACNEISKVCWY 462
Query: 621 KTRGYTVNTSIGSHLTSKSLRETKESSLCDTIHCQSLFWIVTS 493
K YTV++S+ SHL+ K L + K+ LCDTIH W+V +
Sbjct: 461 KPGSYTVHSSVRSHLSCKHLGKPKKGCLCDTIHSHGRMWMVAT 333
Score = 65.2 bits (136), Expect(2) = 4e-032
Identities = 35/88 (39%), Positives = 46/88 (52%)
Frame = -3 / -2
Query: 453 VRSSILNKKDRSLDVNIPQLIENRLFHFKYAIYRRICGSIGDKNIYVPKALDGRLDEALA 274
VR IL +D ++N PQLIE+R F+ I R I SIG N+Y+ L L E L
Sbjct: 293 VRGRILQ*EDSCFNINFPQLIEDRFLGFQNGICRWIDSSIGYNNVYLSIFLYSSLYEILP 114
Query: 273 LLCVGDVADGTNRGDTLGPEPLHRLVHV 190
LLC+ V D T D E L L+++
Sbjct: 113 LLCI*YVTDNTQHFDAFSFEFLSCLIYI 30
Score = 31.3 bits (62), Expect(2) = 8e-053
Identities = 16/37 (43%), Positives = 17/37 (45%)
Frame = -1 / -3
Query: 812 SLDCTPPATTMVSAVMYDXXXXXXXXXXXXXXSTVPN 702
SLD PPATT VS VM D S VP+
Sbjct: 652 SLDGIPPATTKVSPVM*DASSEAKKATAEAMSSVVPS 542
>gb|BU878685.1|BU878685 V050C06 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 612
Score = 321 bits (696), Expect = 4e-087
Identities = 135/192 (70%), Positives = 155/192 (80%)
Frame = +1 / +3
Query: 70 RRLEGKVAIVTASTMGIGLAIAERLGLEGAAVVISSRKQKNVNEAVEGLRAKGITAVGAV 249
+R EGKV IVTAST GIG +IAER GLEGA+VVISSRKQKNV+EA E L+AKGI +G V
Sbjct: 36 KRFEGKVVIVTASTQGIGFSIAERFGLEGASVVISSRKQKNVDEAAEKLKAKGIKVLGVV 215
Query: 250 CHVSDAQQRKSLIETAVKSFGHIDILVSNAAANPSVDSILEMKESVLDKLWDINVKASIL 429
CHVS+AQQRK+LIET V+ +G IDI+VSNAA NPS DSILE +ESVLDKLW+INVKA+IL
Sbjct: 216 CHVSNAQQRKNLIETTVQKYGKIDIVVSNAAVNPSTDSILETQESVLDKLWEINVKAAIL 395
Query: 430 LIQDAAPHLRKGXXXXXXXXXAGYNPEQGLTMYGVTKTALFGLTKALAGEMGPDTRVNCI 609
L++DA PH++KG GY+P + MYGVTKTALFGLTK LA EM P TRVNCI
Sbjct: 396 LLKDATPHMKKGSSVILISSIGGYHPHSSMAMYGVTKTALFGLTKVLAAEMAPHTRVNCI 575
Query: 610 APGFVPTRFASF 645
APGFVPT FA F
Sbjct: 576 APGFVPTHFADF 611
Score = 196 bits (423), Expect(2) = 5e-050
Identities = 95/161 (59%), Positives = 107/161 (66%)
Frame = -1 / -3
Query: 644 KLANRVGTKPGAIQLTRVSGPISPARAFVRPKRAVFVTPYIVNPCSGL*PAIEEIIITDD 465
K A VGT PGAIQ TRV G IS A V PKRAVFVTPYI G *P IEEI IT++
Sbjct: 610 KSAKCVGTNPGAIQFTRV*GAISAASTLVSPKRAVFVTPYIAMEECGW*PPIEEIRITEE 431
Query: 464 PFXXXXXXXXXXXIEALTLISHSLSRTDSFISSMLSTEGFAAALETRISMCPKLLTAVSM 285
PF I ALTLISHSLSRTDS++S M S +G AAL+T +S+ P T VSM
Sbjct: 430 PFFM*GVASFSRRIAALTLISHSLSRTDSWVSKMESVDGLTAALDTTMSIFPYFCTVVSM 251
Query: 284 RLLRCCASETWQTAPTAVIPLALSPSTASFTFFCLREEMTT 162
R CCA +T QT P ++PLALS S AS TFFCLREE+TT
Sbjct: 250 RFFLCCAFDT*QTTPNTLMPLALSFSAASSTFFCLREEITT 128
Score = 129 bits (276), Expect = 3e-029
Identities = 57/134 (42%), Positives = 74/134 (55%)
Frame = +3 / +2
Query: 243 CRLPRLRRTAAQEPHRDGRQELWAHRYSCLQCCRKSFCR*HT*NERVCSR*AVGY*RQGF 422
C L R++ T +E HRD E+W R+ C+QCC +S R H N +C *AVG *
Sbjct: 209 CCLSRIKCTTEEESHRDYCTEIWKDRHCCIQCCCQSIYRFHFGNPGICP**AVGN*C*SS 388
Query: 423 YPSYSGCCSSPTEGVICDYYFFNCWLQSRTRIDNVWCHKDCSLWSHEGSCW*DGTRYSC* 602
YP GC S EG F WL S VWCHKD W+++G+C *+G+ +S
Sbjct: 389 YPPTEGCDPSHEEGFFSYSDFLYWWLPSTFFHGYVWCHKDSPFWAYQGACS*NGSSHSSE 568
Query: 603 LYSPWFCSYTVC*F 644
LYS W C+ T+C*F
Sbjct: 569 LYSSWVCTNTLC*F 610
Score = 73.9 bits (155), Expect(2) = 4e-024
Identities = 42/131 (32%), Positives = 62/131 (47%)
Frame = -3 / -2
Query: 453 VRSSILNKKDRSLDVNIPQLIENRLFHFKYAIYRRICGSIGDKNIYVPKALDGRLDEALA 274
VR IL +D ++N PQLI++R F+ I R I SIG N+Y+ L L E L
Sbjct: 419 VRGRILQ*EDSCFNINFPQLIKDRFLGFQNGICRWIDSSIGYNNVYLSIFLYSSLYEILP 240
Query: 273 LLCVGDVADGTNRGDTLGPEPLHRLVHVXXXXXXXXXXXXLQTEALGDGEADPHRGRRHD 94
LLC+ V D T D E L L+++ Q++ L G+A+ H+
Sbjct: 239 LLCI*YVTDNTQHFDAFSFEFLSCLIYIFLLARRDNNRSTFQSKPLSYGKANTLS*SGHN 60
Query: 93 GHLPLQTPALD 61
H P ++ + D
Sbjct: 59 YHFPFKSLSTD 27
Score = 57.9 bits (120), Expect(2) = 4e-024
Identities = 23/51 (45%), Positives = 31/51 (60%)
Frame = -3 / -2
Query: 645 ETSKPCRNKTRGYTVNTSIGSHLTSKSLRETKESSLCDTIHCQSLFWIVTS 493
E SK C K R YTV++S+ SH + K L + K+ LCDTIH W+V +
Sbjct: 611 EISKVCWYKPRSYTVHSSVRSHFSCKHLGKPKKGCLCDTIHSHGRMWMVAT 459
Score = 22.1 bits (42), Expect(2) = 5e-050
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = -1 / -3
Query: 110 VDAVTMATFPS 78
V+AVT+ TFPS
Sbjct: 76 VEAVTITTFPS 44
>gb|CK090453.1|CK090453 F006P03.3pR Populus flower cDNA library Populus trichocarpa cDNA
clone F006P03 3', mRNA sequence
Length = 856
Score = 138 bits (297), Expect(3) = 4e-084
Identities = 60/82 (73%), Positives = 71/82 (86%)
Frame = +1 / -1
Query: 142 LGLEGAAVVISSRKQKNVNEAVEGLRAKGITAVGAVCHVSDAQQRKSLIETAVKSFGHID 321
+GLEGA+VVISSRKQKNV+EA E L+AKGI +G VCHVS+AQQRK+LIET V+ +G ID
Sbjct: 841 VGLEGASVVISSRKQKNVDEAAEKLKAKGIKVLGVVCHVSNAQQRKNLIETTVQKYGKID 662
Query: 322 ILVSNAAANPSVDSILEMKESV 387
I+VSNAA NPS DSILE +ESV
Sbjct: 661 IVVSNAAVNPSTDSILETQESV 596
Score = 130 bits (279), Expect(3) = 4e-084
Identities = 54/90 (60%), Positives = 64/90 (71%)
Frame = +1 / -3
Query: 547 LFGLTKALAGEMGPDTRVNCIAPGFVPTRFASFLTENETIRKELNERTKLKRLGTVEDMX 726
LFGLTK LA EM P TRVNCIAPGFVPT FA F+T N+T+RK + ++T L+RLGT +DM
Sbjct: 434 LFGLTKVLAAEMAPHTRVNCIAPGFVPTHFADFITGNQTVRKTIEDQTLLQRLGTTDDMA 255
Query: 727 XXXXXXXXXXXXYITAETIVVAGGVQSRL* 816
YIT ET+VVAGG+ SRL*
Sbjct: 254 SAVAFLASDDASYITGETLVVAGGMPSRL* 165
Score = 99.1 bits (210), Expect(3) = 3e-049
Identities = 43/75 (57%), Positives = 53/75 (70%)
Frame = -1 / +3
Query: 386 TDSFISSMLSTEGFAAALETRISMCPKLLTAVSMRLLRCCASETWQTAPTAVIPLALSPS 207
TDS++S M S +G AAL+T +S+ P T VSMR CCA +T QT P ++PLALS S
Sbjct: 597 TDSWVSRMESVDGLTAALDTTMSIFPYFCTVVSMRFFLCCAFDT*QTTPNTLMPLALSFS 776
Query: 206 TASFTFFCLREEMTT 162
AS TFFCLREE+TT
Sbjct: 777 AASSTFFCLREEITT 821
Score = 82.2 bits (173), Expect(3) = 4e-084
Identities = 31/55 (56%), Positives = 39/55 (70%)
Frame = +1 / -2
Query: 388 LDKLWDINVKASILLIQDAAPHLRKGXXXXXXXXXAGYNPEQGLTMYGVTKTALF 552
LDKLW+INVKA+ILL++DA PH++KG GY+P + MYGVTKTA F
Sbjct: 594 LDKLWEINVKAAILLLKDATPHMKKGSSVILISSIGGYHPHSSMAMYGVTKTAPF 430
Score = 75.3 bits (158), Expect(3) = 3e-049
Identities = 36/85 (42%), Positives = 48/85 (56%)
Frame = -3 / +3
Query: 801 HPSSNNNGFSRNV*CVVRRQKSRSRSHVFHSTQSLKLGPLVKLFPNGLIFCEETSKPCRN 622
HPSS + FS V ++R QK HV + LK G ++ PNGLI C E SK C
Sbjct: 180 HPSSYHQSFSCYVRRIIRSQKGDC*GHVVCGAKPLKQGLILNRLPNGLIACNEISKVCWY 359
Query: 621 KTRGYTVNTSIGSHLTSKSLRETKE 547
K YTV++S+ SHL+ K L + K+
Sbjct: 360 KPGSYTVHSSVRSHLSCKHLGKPKK 434
Score = 63.4 bits (132), Expect(3) = 1e-026
Identities = 34/90 (37%), Positives = 48/90 (53%)
Frame = +3 / -2
Query: 537 KDCSLWSHEGSCW*DGTRYSC*LYSPWFCSYTVC*FPHRK*DH*ERA*REDQA*EIGYCG 716
K W+++G+C *DG+ +S LYS C+ T+C*F +R+ D *E * D A + +
Sbjct: 444 KTAPFWAYQGACS*DGSSHSSELYSSRVCTNTLC*FHYRQSDR*EDD*GSDLASKAWHHR 265
Query: 717 RHGCGCGFSGV*RRIIHYG*NHCCCWRGAV 806
RHG G * ++H N WR AV
Sbjct: 264 RHGLSSRLFGF**CVLHNRRNFGGSWRDAV 175
Score = 60.2 bits (125), Expect(3) = 3e-049
Identities = 32/55 (58%), Positives = 34/55 (61%)
Frame = -1 / +2
Query: 551 KRAVFVTPYIVNPCSGL*PAIEEIIITDDPFXXXXXXXXXXXIEALTLISHSLSR 387
K AVFVTPYI G *P IEEI IT++PF I ALTLISHSLSR
Sbjct: 431 KGAVFVTPYIAMEECGW*PPIEEIRITEEPFFM*GVASFSRRIAALTLISHSLSR 595
Score = 55.1 bits (114), Expect(3) = 1e-026
Identities = 20/48 (41%), Positives = 29/48 (60%)
Frame = +3 / -3
Query: 243 CRLPRLRRTAAQEPHRDGRQELWAHRYSCLQCCRKSFCR*HT*NERVC 386
C L R++ T +E HRD E+W R+ C+QCC +S R H+ N +C
Sbjct: 740 CCLSRIKCTTEEESHRDYCTEIWKDRHCCIQCCCQSIYRFHSGNPGIC 597
Score = 39.6 bits (80), Expect(3) = 1e-026
Identities = 22/50 (44%), Positives = 22/50 (44%)
Frame = +3 / -1
Query: 393 *AVGY*RQGFYPSYSGCCSSPTEGVICDYYFFNCWLQSRTRIDNVWCHKD 542
*AVG * YP GC S EG F WL S VWCHKD
Sbjct: 589 *AVGN*C*SSYPPTEGCDPSHEEGFFSYSDFLYWWLPSTFFHGYVWCHKD 440
>gb|CV248271.1|CV248271 WS01120.B21_B05 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01120_B05 3', mRNA sequence
Length = 574
Score = 281 bits (609), Expect = 4e-075
Identities = 119/173 (68%), Positives = 139/173 (80%)
Frame = +1 / -1
Query: 70 RRLEGKVAIVTASTMGIGLAIAERLGLEGAAVVISSRKQKNVNEAVEGLRAKGITAVGAV 249
+R EGKV IVTAST GIG +IAER GLEGA+VVISSRKQKNV+EA E L+AKGI +G V
Sbjct: 523 KRFEGKVVIVTASTQGIGFSIAERFGLEGASVVISSRKQKNVDEAAEKLKAKGIKVLGVV 344
Query: 250 CHVSDAQQRKSLIETAVKSFGHIDILVSNAAANPSVDSILEMKESVLDKLWDINVKASIL 429
CHVS+AQQRK+LIET V+ +G IDI+VSNAA NPS DSILE +ESVLDKLW+INVKA+IL
Sbjct: 343 CHVSNAQQRKNLIETTVQKYGKIDIVVSNAAVNPSTDSILETQESVLDKLWEINVKAAIL 164
Query: 430 LIQDAAPHLRKGXXXXXXXXXAGYNPEQGLTMYGVTKTALFGLTKALAGEMGP 588
L++DA PH++KG GY+P + MYGVTKTALFGLTK LA EM P
Sbjct: 163 LLKDATPHMKKGSSVILISSIGGYHPHSSMAMYGVTKTALFGLTKVLAAEMAP 5
Score = 171 bits (368), Expect(2) = 2e-042
Identities = 82/142 (57%), Positives = 94/142 (66%)
Frame = -1 / +3
Query: 587 GPISPARAFVRPKRAVFVTPYIVNPCSGL*PAIEEIIITDDPFXXXXXXXXXXXIEALTL 408
G IS A V PKRAVFVTPYI G *P IEEI IT++PF I ALTL
Sbjct: 6 GAISAASTLVSPKRAVFVTPYIAMEECGW*PPIEEIRITEEPFFM*GVASFSRRIAALTL 185
Query: 407 ISHSLSRTDSFISSMLSTEGFAAALETRISMCPKLLTAVSMRLLRCCASETWQTAPTAVI 228
ISHSLSRTDS++S M S +G AAL+T +S+ P T VSMR CCA +T QT P ++
Sbjct: 186 ISHSLSRTDSWVSKMESVDGLTAALDTTMSIFPYFCTVVSMRFFLCCAFDT*QTTPNTLM 365
Query: 227 PLALSPSTASFTFFCLREEMTT 162
PLALS S AS TFFCLREE+TT
Sbjct: 366 PLALSFSAASSTFFCLREEITT 431
Score = 104 bits (222), Expect = 9e-022
Identities = 47/115 (40%), Positives = 61/115 (53%)
Frame = +3 / -3
Query: 243 CRLPRLRRTAAQEPHRDGRQELWAHRYSCLQCCRKSFCR*HT*NERVCSR*AVGY*RQGF 422
C L R++ T +E HRD E+W R+ C+QCC +S R H N +C *AVG *
Sbjct: 350 CCLSRIKCTTEEESHRDYCTEIWKDRHCCIQCCCQSIYRFHFGNPGICP**AVGN*C*SS 171
Query: 423 YPSYSGCCSSPTEGVICDYYFFNCWLQSRTRIDNVWCHKDCSLWSHEGSCW*DGT 587
YP GC S EG F WL S VWCHKD W+++G+C *+G+
Sbjct: 170 YPPTEGCDPSHEEGFFSYSDFLYWWLPSTFFHGYVWCHKDSPFWAYQGACS*NGS 6
Score = 22.1 bits (42), Expect(2) = 2e-042
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = -1 / +3
Query: 110 VDAVTMATFPS 78
V+AVT+ TFPS
Sbjct: 483 VEAVTITTFPS 515
>gb|DT495302.1|DT495302 WS01120.BR_B05 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01120_B05 5', mRNA sequence
Length = 592
Score = 281 bits (609), Expect = 4e-075
Identities = 119/173 (68%), Positives = 139/173 (80%)
Frame = +1 / +1
Query: 70 RRLEGKVAIVTASTMGIGLAIAERLGLEGAAVVISSRKQKNVNEAVEGLRAKGITAVGAV 249
+R EGKV IVTAST GIG +IAER GLEGA+VVISSRKQKNV+EA E L+AKGI +G V
Sbjct: 70 KRFEGKVVIVTASTQGIGFSIAERFGLEGASVVISSRKQKNVDEAAEKLKAKGIKVLGVV 249
Query: 250 CHVSDAQQRKSLIETAVKSFGHIDILVSNAAANPSVDSILEMKESVLDKLWDINVKASIL 429
CHVS+AQQRK+LIET V+ +G IDI+VSNAA NPS DSILE +ESVLDKLW+INVKA+IL
Sbjct: 250 CHVSNAQQRKNLIETTVQKYGKIDIVVSNAAVNPSTDSILETQESVLDKLWEINVKAAIL 429
Query: 430 LIQDAAPHLRKGXXXXXXXXXAGYNPEQGLTMYGVTKTALFGLTKALAGEMGP 588
L++DA PH++KG GY+P + MYGVTKTALFGLTK LA EM P
Sbjct: 430 LLKDATPHMKKGSSVILISSIGGYHPHSSMAMYGVTKTALFGLTKVLAAEMAP 588
Score = 171 bits (368), Expect(2) = 2e-042
Identities = 82/142 (57%), Positives = 94/142 (66%)
Frame = -1 / -3
Query: 587 GPISPARAFVRPKRAVFVTPYIVNPCSGL*PAIEEIIITDDPFXXXXXXXXXXXIEALTL 408
G IS A V PKRAVFVTPYI G *P IEEI IT++PF I ALTL
Sbjct: 587 GAISAASTLVSPKRAVFVTPYIAMEECGW*PPIEEIRITEEPFFM*GVASFSRRIAALTL 408
Query: 407 ISHSLSRTDSFISSMLSTEGFAAALETRISMCPKLLTAVSMRLLRCCASETWQTAPTAVI 228
ISHSLSRTDS++S M S +G AAL+T +S+ P T VSMR CCA +T QT P ++
Sbjct: 407 ISHSLSRTDSWVSKMESVDGLTAALDTTMSIFPYFCTVVSMRFFLCCAFDT*QTTPNTLM 228
Query: 227 PLALSPSTASFTFFCLREEMTT 162
PLALS S AS TFFCLREE+TT
Sbjct: 227 PLALSFSAASSTFFCLREEITT 162
Score = 104 bits (222), Expect = 9e-022
Identities = 47/115 (40%), Positives = 61/115 (53%)
Frame = +3 / +3
Query: 243 CRLPRLRRTAAQEPHRDGRQELWAHRYSCLQCCRKSFCR*HT*NERVCSR*AVGY*RQGF 422
C L R++ T +E HRD E+W R+ C+QCC +S R H N +C *AVG *
Sbjct: 243 CCLSRIKCTTEEESHRDYCTEIWKDRHCCIQCCCQSIYRFHFGNPGICP**AVGN*C*SS 422
Query: 423 YPSYSGCCSSPTEGVICDYYFFNCWLQSRTRIDNVWCHKDCSLWSHEGSCW*DGT 587
YP GC S EG F WL S VWCHKD W+++G+C *+G+
Sbjct: 423 YPPTEGCDPSHEEGFFSYSDFLYWWLPSTFFHGYVWCHKDSPFWAYQGACS*NGS 587
Score = 22.1 bits (42), Expect(2) = 2e-042
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = -1 / -3
Query: 110 VDAVTMATFPS 78
V+AVT+ TFPS
Sbjct: 110 VEAVTITTFPS 78
>gb|DN494002.1|DN494002 I058P10.5pR Populus senescing leaves cDNA library Populus tremula
cDNA clone I058P10 5', mRNA sequence
Length = 758
Score = 272 bits (589), Expect = 2e-072
Identities = 115/167 (68%), Positives = 136/167 (81%)
Frame = +1 / +3
Query: 70 RRLEGKVAIVTASTMGIGLAIAERLGLEGAAVVISSRKQKNVNEAVEGLRAKGITAVGAV 249
+R EGKV IVTAST GIG +IAER GLEGA+VVISSRKQKNV+EAVE L+AKGI +G V
Sbjct: 249 KRFEGKVVIVTASTQGIGFSIAERFGLEGASVVISSRKQKNVDEAVEKLKAKGIRVLGVV 428
Query: 250 CHVSDAQQRKSLIETAVKSFGHIDILVSNAAANPSVDSILEMKESVLDKLWDINVKASIL 429
CHVS+AQQRK+LIET V+ +G IDI+VSNAA NPS DSILE +ESVLDKLW+INV+A+IL
Sbjct: 429 CHVSNAQQRKNLIETTVQKYGKIDIVVSNAAVNPSTDSILETQESVLDKLWEINVRAAIL 608
Query: 430 LIQDAAPHLRKGXXXXXXXXXAGYNPEQGLTMYGVTKTALFGLTKAL 570
L++DA PH++KG GY+P + MYGVTKTALFGLTK L
Sbjct: 609 LLKDATPHMKKGSSVILISSIGGYHPHSSMAMYGVTKTALFGLTKGL 749
Score = 167 bits (359), Expect(2) = 3e-041
Identities = 79/136 (58%), Positives = 92/136 (67%)
Frame = -1 / -2
Query: 569 RAFVRPKRAVFVTPYIVNPCSGL*PAIEEIIITDDPFXXXXXXXXXXXIEALTLISHSLS 390
+ V PKRAVFVTPYI G *P IEEI IT++PF I ALTLISHSLS
Sbjct: 748 KPLVSPKRAVFVTPYIAMEECGW*PPIEEIRITEEPFFM*GVASFSKRIAALTLISHSLS 569
Query: 389 RTDSFISSMLSTEGFAAALETRISMCPKLLTAVSMRLLRCCASETWQTAPTAVIPLALSP 210
RTDS++S M S +G AAL+T +S+ P T VSMR CCA +T QT P ++PLALS
Sbjct: 568 RTDSWVSKMESVDGLTAALDTTMSIFPYFCTVVSMRFFLCCAFDT*QTTPNTLMPLALSF 389
Query: 209 STASFTFFCLREEMTT 162
STAS TFFCLREE+TT
Sbjct: 388 STASSTFFCLREEITT 341
Score = 22.1 bits (42), Expect(2) = 3e-041
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = -1 / -2
Query: 110 VDAVTMATFPS 78
V+AVT+ TFPS
Sbjct: 289 VEAVTITTFPS 257
>gb|CV237987.1|CV237987 WS0124.B21_N16 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS0124_N16 3', mRNA sequence
Length = 640
Score = 264 bits (571), Expect = 6e-070
Identities = 110/177 (62%), Positives = 130/177 (73%)
Frame = +1 / -2
Query: 286 IETAVKSFGHIDILVSNAAANPSVDSILEMKESVLDKLWDINVKASILLIQDAAPHLRKG 465
IET V+ +G IDI+VSNAA NPS DSILE +ESVLDKLW+INVKA+ILL++DA PH++KG
Sbjct: 639 IETTVQKYGKIDIVVSNAAVNPSTDSILETQESVLDKLWEINVKAAILLLKDATPHMKKG 460
Query: 466 XXXXXXXXXAGYNPEQGLTMYGVTKTALFGLTKALAGEMGPDTRVNCIAPGFVPTRFASF 645
GY+P + MYGVTKTALFGLTK LA EM P TRVNCIAPGFVPT FA F
Sbjct: 459 SSVILISSIGGYHPHSSMAMYGVTKTALFGLTKVLAAEMAPHTRVNCIAPGFVPTHFADF 280
Query: 646 LTENETIRKELNERTKLKRLGTVEDMXXXXXXXXXXXXXYITAETIVVAGGVQSRL* 816
+T N+TIRK + ++T LKRLGT +DM YIT ET+VVAGG+ SRL*
Sbjct: 279 ITGNQTIRKTIEDQTLLKRLGTTDDMASAVAFLASDDASYITGETLVVAGGMPSRL* 109
Score = 139 bits (298), Expect = 3e-032
Identities = 70/174 (40%), Positives = 90/174 (51%)
Frame = +3 / -1
Query: 285 HRDGRQELWAHRYSCLQCCRKSFCR*HT*NERVCSR*AVGY*RQGFYPSYSGCCSSPTEG 464
HRD E+W R+ C+QCC +S R H N +C *AVG * YP GC S EG
Sbjct: 640 HRDYCTEIWKDRHCCIQCCCQSIYRFHFGNPGICP**AVGN*C*SSYPPTEGCDPSHEEG 461
Query: 465 VICDYYFFNCWLQSRTRIDNVWCHKDCSLWSHEGSCW*DGTRYSC*LYSPWFCSYTVC*F 644
F WL S VWCHKD W+++G+C *+G+ +S LYS W C+ T+C*F
Sbjct: 460 FFSYSDFLYWWLPSTFFHGYVWCHKDSPFWAYQGACS*NGSSHSSELYSSWVCTNTLC*F 281
Query: 645 PHRK*DH*ERA*REDQA*EIGYCGRHGCGCGFSGV*RRIIHYG*NHCCCWRGAV 806
+R+ DH*+ * D A*+ + RHG G +H N WR AV
Sbjct: 280 HYRQSDH*KDD*GSDLA*KAWHHRRHGLSSRLFGFR*CFLHNRRNFGGSWRDAV 119
Score = 137 bits (293), Expect(2) = 2e-034
Identities = 69/120 (57%), Positives = 77/120 (64%)
Frame = -1 / +2
Query: 644 KLANRVGTKPGAIQLTRVSGPISPARAFVRPKRAVFVTPYIVNPCSGL*PAIEEIIITDD 465
K A VGT PGAIQ TRV G IS A V PKRAVFVTPYI G *P IEEI IT++
Sbjct: 281 KSAKCVGTNPGAIQFTRV*GAISAASTLVSPKRAVFVTPYIAMEECGW*PPIEEIRITEE 460
Query: 464 PFXXXXXXXXXXXIEALTLISHSLSRTDSFISSMLSTEGFAAALETRISMCPKLLTAVSM 285
PF I ALTLISHSLSRTDS++S M S +G AAL+T +S+ P T VSM
Sbjct: 461 PFFM*GVASFSRRIAALTLISHSLSRTDSWVSKMESVDGLTAALDTTMSIFPYFCTVVSM 640
Score = 91.3 bits (193), Expect(2) = 3e-025
Identities = 41/103 (39%), Positives = 55/103 (53%)
Frame = -3 / +1
Query: 801 HPSSNNNGFSRNV*CVVRRQKSRSRSHVFHSTQSLKLGPLVKLFPNGLIFCEETSKPCRN 622
HPSS + FS V ++ QK HV + K G ++ NGLI C E SK C
Sbjct: 124 HPSSYHQSFSCYVRSIIGSQKGDC*GHVVCGAKPFKQGLILNRLSNGLIACNEISKVCWY 303
Query: 621 KTRGYTVNTSIGSHLTSKSLRETKESSLCDTIHCQSLFWIVTS 493
K R YTV++S+ SH + K L + K+ LCDTIH W+V +
Sbjct: 304 KPRSYTVHSSVRSHFSCKHLGKPKKGCLCDTIHSHGRMWMVAT 432
Score = 44.1 bits (90), Expect(2) = 3e-025
Identities = 20/47 (42%), Positives = 28/47 (59%)
Frame = -3 / +1
Query: 453 VRSSILNKKDRSLDVNIPQLIENRLFHFKYAIYRRICGSIGDKNIYV 313
VR IL +D ++N PQLI++R F+ I R I SIG N+Y+
Sbjct: 472 VRGRILQ*EDSCFNINFPQLIKDRFLGFQNGICRWIDSSIGYNNVYL 612
Score = 29.5 bits (58), Expect(2) = 2e-034
Identities = 15/37 (40%), Positives = 17/37 (45%)
Frame = -1 / +2
Query: 812 SLDCTPPATTMVSAVMYDXXXXXXXXXXXXXXSTVPN 702
SLD PPATT VS VM + S VP+
Sbjct: 113 SLDGIPPATTKVSPVM*EASSEAKKATAEAMSSVVPS 223
>gb|CV280631.1|CV280631 WS0137.B21_B15 PTxD-IL-FL-A-4 Populus trichocarpa x Populus
deltoides cDNA clone WS0137_B15 3', mRNA sequence
Length = 798
Score = 231 bits (499), Expect = 5e-060
Identities = 103/197 (52%), Positives = 128/197 (64%)
Frame = +1 / -3
Query: 226 GITAVGAVCHVSDAQQRKSLIETAVKSFGHIDILVSNAAANPSVDSILEMKESVLDKLWD 405
G+ +G VC VS+AQ RK+ IE +V+ +G ID++VSNAA NP DS+LE E VLDKLW+
Sbjct: 796 GLKVLGVVCPVSNAQPRKNFIEASVQKYGKIDLVVSNAAVNPFTDSLLETPEFVLDKLWE 617
Query: 406 INVKASILLIQDAAPHLRKGXXXXXXXXXAGYNPEQGLTMYGVTKTALFGLTKALAGEMG 585
INVKA+ILL++DAAP ++KG GY P L MYGV KTALFGL+K LA
Sbjct: 616 INVKAAILLLKDAAPPMKKGFSVILISFIGGYPPPFSLAMYGVPKTALFGLSKGLAAGKA 437
Query: 586 PDTRVNCIAPGFVPTRFASFLTENETIRKELNERTKLKRLGTVEDMXXXXXXXXXXXXXY 765
P RVNCIAPGFVPT FA FL+ N+ +RK + + L+RLG M +
Sbjct: 436 PPPRVNCIAPGFVPTPFAGFLSGNQAVRKAVGGQAFLQRLGPPGGMASAVAFLASDDGFF 257
Query: 766 ITAETIVVAGGVQSRL* 816
IT ET+ AGGV SRL*
Sbjct: 256 ITGETLGGAGGVPSRL* 206
Score = 123 bits (264), Expect(2) = 3e-028
Identities = 66/141 (46%), Positives = 76/141 (53%)
Frame = -1 / +3
Query: 647 RKLANRVGTKPGAIQLTRVSGPISPARAFVRPKRAVFVTPYIVNPCSGL*PAIEEIIITD 468
RK A VGT PGAIQ TR G A PKRAVF TPYI G P I+EI IT+
Sbjct: 375 RKPAKGVGTNPGAIQFTRGGGAFPAASPLESPKRAVFGTPYIAREKGGGYPPIKEIKITE 554
Query: 467 DPFXXXXXXXXXXXIEALTLISHSLSRTDSFISSMLSTEGFAAALETRISMCPKLLTAVS 288
PF I ALTLISHSLSRT+S +S S +G AAL+T S+ P T S
Sbjct: 555 KPFFMGGAASFRRRIAALTLISHSLSRTNSGVSKRESVKGLTAALDTTRSIFPYFCTEAS 734
Query: 287 MRLLRCCASETWQTAPTAVIP 225
M+ A +T QT P + P
Sbjct: 735 MKFFLGWAFDTGQTTPNTLRP 797
Score = 24.4 bits (47), Expect(2) = 3e-028
Identities = 7/11 (63%), Positives = 10/11 (90%)
Frame = -2 / +3
Query: 991 FFFFFLKRNKI 959
FFFFF ++NK+
Sbjct: 48 FFFFFFQKNKV 80
>gb|DT493154.1|DT493154 WS02553.C21_I23 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02553_I23 3', mRNA sequence
Length = 832
Score = 104 bits (222), Expect(4) = 5e-056
Identities = 44/78 (56%), Positives = 56/78 (71%)
Frame = +1 / -3
Query: 229 ITAVGAVCHVSDAQQRKSLIETAVKSFGHIDILVSNAAANPSVDSILEMKESVLDKLWDI 408
+ VG CHVS A RK+L E A+K FG IDILVSNAA NP+V S+L+ E DK++D+
Sbjct: 713 LDVVGVKCHVSIADDRKNLFEAAIKHFGKIDILVSNAAVNPTVGSVLDCPEDAWDKIFDV 534
Query: 409 NVKASILLIQDAAPHLRK 462
NVK+S LL ++ AP LRK
Sbjct: 533 NVKSSYLLAKEVAPILRK 480
Score = 73.5 bits (154), Expect(4) = 5e-056
Identities = 34/74 (45%), Positives = 43/74 (58%)
Frame = +1 / -3
Query: 595 RVNCIAPGFVPTRFASFLTENETIRKELNERTKLKRLGTVEDMXXXXXXXXXXXXXYITA 774
RVNCIAPG V T+F+ + E++T +KRLG VED+ YIT+
Sbjct: 338 RVNCIAPGIVRTKFSKAMHESKTAEDIALSMIPMKRLGKVEDISGIASFLASDDAAYITS 159
Query: 775 ETIVVAGGVQSRL* 816
ETIV AGG+ SRL*
Sbjct: 158 ETIVCAGGMPSRL* 117
Score = 52.8 bits (109), Expect(4) = 5e-056
Identities = 24/45 (53%), Positives = 30/45 (66%)
Frame = +1 / -3
Query: 115 GIGLAIAERLGLEGAAVVISSRKQKNVNEAVEGLRAKGITAVGAV 249
GIG AIA+R EGA V+ISSRK++NV AV L++ G V V
Sbjct: 830 GIGFAIAKRFAAEGAKVIISSRKEENVKNAVSQLKSDGFLDVVGV 696
Score = 44.6 bits (91), Expect(4) = 5e-056
Identities = 19/33 (57%), Positives = 24/33 (72%)
Frame = +1 / -3
Query: 493 AGYNPEQGLTMYGVTKTALFGLTKALAGEMGPD 591
AG NP L Y V+KTALFGLTKAL+ ++ P+
Sbjct: 443 AGLNPFPLLGAYSVSKTALFGLTKALSQDLAPE 345
>gb|DT490757.1|DT490757 WS02545.B21_N20 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02545_N20 3', mRNA sequence
Length = 714
Score = 171 bits (369), Expect(2) = 8e-053
Identities = 68/103 (66%), Positives = 80/103 (77%)
Frame = +1 / -1
Query: 358 DSILEMKESVLDKLWDINVKASILLIQDAAPHLRKGXXXXXXXXXAGYNPEQGLTMYGVT 537
DSILE +ESVLDKLW+INVKA+ILL++DA PH++KG GY+P + MYGVT
Sbjct: 714 DSILETQESVLDKLWEINVKAAILLLKDATPHMKKGSSVILISSIGGYHPHSSMAMYGVT 535
Query: 538 KTALFGLTKALAGEMGPDTRVNCIAPGFVPTRFASFLTENETI 666
KTALFGLTK LA EM P TRVNCIAPGFVPT FA F+T N+T+
Sbjct: 534 KTALFGLTKVLAAEMAPHTRVNCIAPGFVPTHFADFITGNQTV 406
Score = 112 bits (239), Expect(2) = 7e-027
Identities = 57/94 (60%), Positives = 61/94 (64%)
Frame = -1 / +2
Query: 644 KLANRVGTKPGAIQLTRVSGPISPARAFVRPKRAVFVTPYIVNPCSGL*PAIEEIIITDD 465
K A VGT PGAIQ TRV G IS A V PKRAVFVTPYI G *P IEEI IT++
Sbjct: 428 KSAKCVGTNPGAIQFTRV*GAISAASTLVSPKRAVFVTPYIAMEECGW*PPIEEIRITEE 607
Query: 464 PFXXXXXXXXXXXIEALTLISHSLSRTDSFISSM 363
PF I ALTLISHSLSRTDS++S M
Sbjct: 608 PFFM*GVASFSRRIAALTLISHSLSRTDSWVSRM 709
Score = 56.1 bits (116), Expect(2) = 8e-053
Identities = 24/50 (48%), Positives = 31/50 (62%)
Frame = +1 / -1
Query: 667 RKELNERTKLKRLGTVEDMXXXXXXXXXXXXXYITAETIVVAGGVQSRL* 816
RK + ++T L+RLGT +DM YIT ET+VVAGG+ SRL*
Sbjct: 306 RKTIEDQTLLQRLGTTDDMASAVAFLASDDASYITGETLVVAGGMPSRL* 157
Score = 31.3 bits (62), Expect(2) = 7e-027
Identities = 16/37 (43%), Positives = 17/37 (45%)
Frame = -1 / +2
Query: 812 SLDCTPPATTMVSAVMYDXXXXXXXXXXXXXXSTVPN 702
SLD PPATT VS VM D S VP+
Sbjct: 161 SLDGIPPATTKVSPVM*DASSEAKKATAEAMSSVVPS 271
>gb|CA824495.1|CA824495 R43E01 two-month-old roots from clone 'Beaupre' Populus trichocarpa
x Populus deltoides cDNA 5', mRNA sequence
Length = 582
Score = 199 bits (430), Expect = 2e-050
Identities = 86/125 (68%), Positives = 104/125 (83%)
Frame = +1 / +1
Query: 70 RRLEGKVAIVTASTMGIGLAIAERLGLEGAAVVISSRKQKNVNEAVEGLRAKGITAVGAV 249
+R EG+V IVTAST GIG + AER GLEGA+VVISSRKQKNV+EAVE L+AKGI VG +
Sbjct: 208 KRFEGRVVIVTASTQGIGFSTAERFGLEGASVVISSRKQKNVDEAVEKLKAKGIKVVGVI 387
Query: 250 CHVSDAQQRKSLIETAVKSFGHIDILVSNAAANPSVDSILEMKESVLDKLWDINVKASIL 429
CHVS+AQQRK+LIET V+ +G ID++VSNAA +PS DS LE ESV DKLW+I V A+IL
Sbjct: 388 CHVSNAQQRKNLIETTVQKYGKIDVVVSNAAVSPSSDSTLETHESVXDKLWEIXVXAAIL 567
Query: 430 LIQDA 444
L++DA
Sbjct: 568 LLKDA 582
Score = 115 bits (246), Expect = 4e-025
Identities = 52/84 (61%), Positives = 60/84 (71%)
Frame = -1 / -2
Query: 413 TLISHSLSRTDSFISSMLSTEGFAAALETRISMCPKLLTAVSMRLLRCCASETWQTAPTA 234
T ISHSLS TDS++S + S +G AALET S+ P T VSMR CCA +T Q PT
Sbjct: 551 TXISHSLSXTDSWVSKVESEDGLTAALETTTSIFPYFCTVVSMRFFLCCAFDT*QITPTT 372
Query: 233 VIPLALSPSTASFTFFCLREEMTT 162
++PLALS STAS TFFCLREEMTT
Sbjct: 371 LMPLALSFSTASSTFFCLREEMTT 300
>gb|BI119836.1|BI119836 F006P03Y Populus flower cDNA library Populus trichocarpa cDNA, mRNA
sequence
Length = 304
Score = 153 bits (328), Expect = 2e-036
Identities = 67/89 (75%), Positives = 77/89 (86%)
Frame = +1 / +2
Query: 79 EGKVAIVTASTMGIGLAIAERLGLEGAAVVISSRKQKNVNEAVEGLRAKGITAVGAVCHV 258
EGKV IVTAST GIG +IAER GLEGA+VVISSRKQKNV+EA E L+AKGI +G VCHV
Sbjct: 5 EGKVVIVTASTQGIGFSIAERFGLEGASVVISSRKQKNVDEAAEKLKAKGIKVLGVVCHV 184
Query: 259 SDAQQRKSLIETAVKSFGHIDILVSNAAA 345
S+AQQRK+LIET V+ +G IDI+VSNAAA
Sbjct: 185 SNAQQRKNLIETTVQKYGKIDIVVSNAAA 271
>gb|AJ771658.1|AJ771658 AJ771658 Populus euphratica root 3-6 months Populus euphratica cDNA
clone P0001600003H01F1, mRNA sequence
Length = 280
Score = 151 bits (325), Expect = 5e-036
Identities = 61/92 (66%), Positives = 70/92 (76%)
Frame = +1 / -1
Query: 346 NPSVDSILEMKESVLDKLWDINVKASILLIQDAAPHLRKGXXXXXXXXXAGYNPEQGLTM 525
NPS SILE +ESVLDKLW+INVKA+ILL++DA PH++KG GY+P + M
Sbjct: 277 NPSTASILETQESVLDKLWEINVKAAILLLKDATPHMKKGSSVILISSIGGYHPHSSMAM 98
Query: 526 YGVTKTALFGLTKALAGEMGPDTRVNCIAPGF 621
YGVTKTALFGLTK LA EM P TRVNCIAPGF
Sbjct: 97 YGVTKTALFGLTKVLAAEMAPHTRVNCIAPGF 2
Score = 109 bits (232), Expect = 4e-023
Identities = 54/91 (59%), Positives = 60/91 (65%)
Frame = -1 / +3
Query: 620 KPGAIQLTRVSGPISPARAFVRPKRAVFVTPYIVNPCSGL*PAIEEIIITDDPFXXXXXX 441
KPGAIQ TRV G IS A V PKRAVFVTPYI G *P IEEI IT++PF
Sbjct: 3 KPGAIQFTRV*GAISAASTLVSPKRAVFVTPYIAMEECGW*PPIEEIRITEEPFFM*GVA 182
Query: 440 XXXXXIEALTLISHSLSRTDSFISSMLSTEG 348
I ALTLISHSLSRTDS++S M + +G
Sbjct: 183 SFSRRIAALTLISHSLSRTDSWVSKMEAVDG 275
>gb|DN484560.1|DN484560 I058P10.3pR Populus senescing leaves cDNA library Populus tremula
cDNA clone I058P10 3', mRNA sequence
Length = 503
Score = 132 bits (283), Expect = 3e-030
Identities = 57/92 (61%), Positives = 66/92 (71%)
Frame = +1 / -3
Query: 541 TALFGLTKALAGEMGPDTRVNCIAPGFVPTRFASFLTENETIRKELNERTKLKRLGTVED 720
TALFGLTKALA EM P TRVNCIAPGFVPT FA F+T N+TIRK + ++T L+RLG+ ED
Sbjct: 501 TALFGLTKALADEMAPHTRVNCIAPGFVPTLFADFITGNQTIRKTIEDQTLLQRLGSTED 322
Query: 721 MXXXXXXXXXXXXXYITAETIVVAGGVQSRL* 816
M YIT ET+VV GG+ SRL*
Sbjct: 321 MASAVAFLASDDASYITGETLVVDGGMPSRL* 226
>gb|CA929160.1|CA929160 MTU2CA.P8.G04 Aspen apex cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 276
Score = 128 bits (275), Expect = 4e-029
Identities = 55/75 (73%), Positives = 64/75 (85%)
Frame = +1 / -1
Query: 70 RRLEGKVAIVTASTMGIGLAIAERLGLEGAAVVISSRKQKNVNEAVEGLRAKGITAVGAV 249
+R EG+V IVTAST GIG + AER GLEGA+VVISSRKQKNV+EAVE L+AKGI G +
Sbjct: 228 KRFEGRVVIVTASTQGIGFSTAERFGLEGASVVISSRKQKNVDEAVEKLKAKGIKVAGVI 49
Query: 250 CHVSDAQQRKSLIET 294
CHVS+AQQRK+LIET
Sbjct: 48 CHVSNAQQRKNLIET 4
Database: Populus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:49 PM
Number of letters in database: 203,408,664
Number of sequences in database: 369,679
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 387,200,066
Number of Sequences: 369679
Number of extensions: 5150943
Number of successful extensions: 53825
Number of sequences better than 1.0e-020: 18
length of database: 67,802,888
effective HSP length: 53
effective length of database: 48,209,901
effective search space used: 13354142577
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)