TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3023585.2.1
(635 letters)
Database: Populus_nucl_with_EST.fasta
369,679 sequences; 203,408,664 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CK096964.1|CK096964 UB34DPA12.3pR Populus active cambium... 192 1e-055
gb|BU819274.1|BU819274 UA41BPG08 Populus tremula cambium cD... 190 4e-055
gb|CV267224.1|CV267224 WS02031.B21_C18 PTxN-IB-N-A-11 Popul... 191 1e-054
gb|DT516220.1|DT516220 WS02430.B21_L23 PTxD-ICC-N-A-14 Popu... 191 1e-054
gb|CV274847.1|CV274847 WS0174.B21.1_J06 PTxD-NR-A-8 Populus... 191 1e-054
gb|DV464515.1|DV464515 MTUNUL1.P28.E03 NUL Populus fremonti... 191 1e-054
gb|CV227387.1|CV227387 WS0167.B21_A17 PT-DX-A-7 Populus tri... 191 1e-054
gb|CV269160.1|CV269160 WS0207.B21_H21 PTxN-IB-N-A-11 Populu... 191 1e-054
gb|BU896276.1|BU896276 X038C04 Populus wood cDNA library Po... 191 1e-054
gb|CV241850.1|CV241850 WS02513.B21_G18 PT-MB-N-A-15 Populus... 191 1e-054
gb|BU896297.1|BU896297 X038E11 Populus wood cDNA library Po... 191 1e-054
gb|BU894478.1|BU894478 X010A02 Populus wood cDNA library Po... 191 1e-054
gb|CX171314.1|CX171314 G11_69-94_13.ab1 leaf inoculated wit... 191 1e-054
gb|CK099351.1|CK099351 A063P66.5pR Hybrid aspen plasmid lib... 191 1e-054
gb|CV231236.1|CV231236 WS0193.B21_O22 PT-DX-N-A-10 Populus ... 190 2e-054
gb|CK097248.1|CK097248 UB44DPH02.3pR Populus active cambium... 190 3e-054
gb|BU898140.1|BU898140 X075D09 Populus wood cDNA library Po... 189 4e-054
gb|BU891188.1|BU891188 P047A12 Populus petioles cDNA librar... 188 1e-053
gb|AJ772440.1|AJ772440 AJ772440 Populus euphratica shoot in... 193 6e-049
gb|DN488212.1|DN488212 R041G07.3pR Populus root cDNA librar... 171 1e-048
gb|BU894173.1|BU894173 X003H07 Populus wood cDNA library Po... 191 3e-048
gb|BI127370.1|BI127370 G059P39Y Populus cambium cDNA librar... 189 1e-047
gb|BU812023.1|BU812023 UL91TD02 Populus leaf cDNA library P... 188 3e-047
gb|CN524305.1|CN524305 GQ015M13.T3_E09 GQ015 Populus tricho... 172 3e-046
gb|BU818866.1|BU818866 UA35CPF05 Populus tremula cambium cD... 176 3e-046
gb|BU895787.1|BU895787 X031A06 Populus wood cDNA library Po... 156 4e-044
gb|CV276089.1|CV276089 WS0178.B21.1_J13 PTxD-NR-A-8 Populus... 155 1e-043
gb|AI166241.1|AI166241 a063p66u Hybrid aspen plasmid librar... 140 2e-041
gb|BU880106.1|BU880106 UM41TE06 Populus flower cDNA library... 165 3e-040
gb|DT480982.1|DT480982 WS02530.BR_I12 PT-MB-N-A-15 Populus ... 153 7e-040
gb|DT486279.1|DT486279 WS02530.B21_I12 PT-MB-N-A-15 Populus... 153 7e-040
gb|AJ770191.1|AJ770191 AJ770191 Populus euphratica leaf 3-6... 130 2e-036
gb|CK100043.1|CK100043 B006P29.5pR Hybrid aspen plasmid lib... 148 3e-035
gb|DN500128.1|DN500128 UB48DPE03.5pR Populus active cambium... 133 4e-035
gb|DN490157.1|DN490157 UB48DPE03.3pR Populus active cambium... 135 7e-034
gb|AJ773923.1|AJ773923 AJ773923 Populus euphratica shoot 3-... 119 5e-033
gb|CV228921.1|CV228921 WS01911.B21_K08 PT-DX-N-A-10 Populus... 111 9e-031
gb|BU890263.1|BU890263 P034B07 Populus petioles cDNA librar... 100 2e-027
gb|BU827321.1|BU827321 UK131TC05 Populus apical shoot cDNA ... 115 3e-025
gb|CV246013.1|CV246013 WS0259.B21_P22 PT-MB-N-A-15 Populus ... 108 9e-025
gb|AJ777572.1|AJ777572 AJ777572 Populus euphratica root 3-6... 111 3e-024
gb|BU835584.1|BU835584 T075G07 Populus apical shoot cDNA li... 105 1e-023
gb|CN518723.1|CN518723 GQ0104.B3_E10 GQ010 Populus trichoca... 104 2e-023
gb|BU894661.1|BU894661 X012H09 Populus wood cDNA library Po... 94 3e-022
gb|CN520738.1|CN520738 GQ0108.B3_L05 GQ010 Populus trichoca... 104 5e-022
gb|CV240638.1|CV240638 WS0251.B21_O23 PT-MB-N-A-15 Populus ... 104 5e-022
gb|DT469311.1|DT469311 WS01917.C21_G04 PT-DX-N-A-10 Populus... 104 5e-022
gb|CV271647.1|CV271647 WS0155.B21_E13 PTxN-IB-A-6 Populus t... 80 2e-021
gb|CV228507.1|CV228507 WS01910.B21_F21 PT-DX-N-A-10 Populus... 89 6e-021
>gb|CK096964.1|CK096964 UB34DPA12.3pR Populus active cambium cDNA library Populus tremula
cDNA clone UB34DPA12 3', mRNA sequence
Length = 646
Score = 192 bits (413), Expect(2) = 1e-055
Identities = 75/85 (88%), Positives = 79/85 (92%)
Frame = +1 / -2
Query: 1 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAY 180
EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTAD +Q+LTNNLCYTYARCTRSVSVVPPAY
Sbjct: 561 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGIQSLTNNLCYTYARCTRSVSVVPPAY 382
Query: 181 YAHLAAFRARFYMEPEMSENQTSKS 255
YAHLAAFRARFY EP M EN ++ S
Sbjct: 381 YAHLAAFRARFYTEPVMQENGSAGS 307
Score = 103 bits (219), Expect(2) = 3e-026
Identities = 55/79 (69%), Positives = 59/79 (74%)
Frame = -1 / +2
Query: 239 FSDISGSMXXXXXXXXRCA*YAGGTTETERVHRA*V*QRLFVSVCISSAVKLFSSQRTW* 60
FS I+GS+ +CA*YAGGTTETERVH A V*QRLFV I SAVKLFSS +T *
Sbjct: 323 FSCITGSV*NRARKAAKCA*YAGGTTETERVHLAYV*QRLFVKDWIPSAVKLFSSHKT** 502
Query: 59 *AGLLVPWIPA*LQR*KSN 3
AGLLVP IPA LQR*KSN
Sbjct: 503 CAGLLVP*IPAWLQR*KSN 559
Score = 44.6 bits (91), Expect(2) = 1e-055
Identities = 17/21 (80%), Positives = 19/21 (90%)
Frame = +1 / -2
Query: 280 VKPLPAVKEKVKRVMFYC*RG 342
V+PLPA+KE VKRVMFYC* G
Sbjct: 261 VRPLPALKENVKRVMFYC*EG 199
Score = 35.0 bits (70), Expect(2) = 3e-026
Identities = 16/21 (76%), Positives = 16/21 (76%)
Frame = -1 / +2
Query: 341 PRQQ*NITLFTFSFTAGRGFT 279
P Q*NITLFTFSF AG G T
Sbjct: 200 PS*Q*NITLFTFSFKAGSGRT 262
>gb|BU819274.1|BU819274 UA41BPG08 Populus tremula cambium cDNA library Populus tremula cDNA
5 prime, mRNA sequence
Length = 627
Score = 190 bits (409), Expect(2) = 4e-055
Identities = 74/85 (87%), Positives = 78/85 (91%)
Frame = +1 / +2
Query: 1 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAY 180
EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTAD +Q+LTNNLCYTYARCTRSVSVVPPAY
Sbjct: 41 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGIQSLTNNLCYTYARCTRSVSVVPPAY 220
Query: 181 YAHLAAFRARFYMEPEMSENQTSKS 255
YAHLAAFR RFY EP M EN ++ S
Sbjct: 221 YAHLAAFRVRFYTEPVMQENGSAGS 295
Score = 103 bits (219), Expect(2) = 3e-026
Identities = 55/79 (69%), Positives = 59/79 (74%)
Frame = -1 / -1
Query: 239 FSDISGSMXXXXXXXXRCA*YAGGTTETERVHRA*V*QRLFVSVCISSAVKLFSSQRTW* 60
FS I+GS+ +CA*YAGGTTETERVH A V*QRLFV I SAVKLFSS +T *
Sbjct: 279 FSCITGSV*NRTRKAAKCA*YAGGTTETERVHLAYV*QRLFVKDWIPSAVKLFSSHKT** 100
Query: 59 *AGLLVPWIPA*LQR*KSN 3
AGLLVP IPA LQR*KSN
Sbjct: 99 CAGLLVP*IPAWLQR*KSN 43
Score = 44.6 bits (91), Expect(2) = 4e-055
Identities = 17/21 (80%), Positives = 19/21 (90%)
Frame = +1 / +2
Query: 280 VKPLPAVKEKVKRVMFYC*RG 342
V+PLPA+KE VKRVMFYC* G
Sbjct: 341 VRPLPALKENVKRVMFYC*EG 403
Score = 35.0 bits (70), Expect(2) = 3e-026
Identities = 16/21 (76%), Positives = 16/21 (76%)
Frame = -1 / -1
Query: 341 PRQQ*NITLFTFSFTAGRGFT 279
P Q*NITLFTFSF AG G T
Sbjct: 402 PS*Q*NITLFTFSFKAGSGRT 340
>gb|CV267224.1|CV267224 WS02031.B21_C18 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02031_C18 3', mRNA sequence
Length = 960
Score = 191 bits (412), Expect(2) = 1e-054
Identities = 73/85 (85%), Positives = 80/85 (94%)
Frame = +1 / -3
Query: 1 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAY 180
EFDFYLCSHAGIQGTSRPAHYHVLWDEN FTAD +Q+LTNNLCYTYARCTRSVS+VPPAY
Sbjct: 685 EFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADGLQSLTNNLCYTYARCTRSVSIVPPAY 506
Query: 181 YAHLAAFRARFYMEPEMSENQTSKS 255
YAHLAAFRARFYMEPE S++++ S
Sbjct: 505 YAHLAAFRARFYMEPETSDSESIAS 431
Score = 105 bits (225), Expect(2) = 6e-026
Identities = 55/78 (70%), Positives = 58/78 (74%)
Frame = -1 / +3
Query: 236 SDISGSMXXXXXXXXRCA*YAGGTTETERVHRA*V*QRLFVSVCISSAVKLFSSQRTW** 57
SD+SGSM R A*YAGGT ET+RVHRA V*QRLFV C SAV LFSSQ TW**
Sbjct: 450 SDVSGSM*KRARNAAR*A*YAGGTMETDRVHRAYV*QRLFVRDCSPSAVNLFSSQSTW** 629
Query: 56 AGLLVPWIPA*LQR*KSN 3
AG LVP IPA*L +*KSN
Sbjct: 630 AGRLVP*IPA*LHK*KSN 683
Score = 41.8 bits (85), Expect(2) = 1e-054
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = +1 / -3
Query: 280 VKPLPAVKEKVKRVMFYC* 336
V+PLPA+KE VKRVMFYC*
Sbjct: 358 VRPLPALKENVKRVMFYC* 302
Score = 31.3 bits (62), Expect(2) = 6e-026
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = -1 / +3
Query: 332 Q*NITLFTFSFTAGRGFT 279
Q*NIT TFSF AG+G T
Sbjct: 306 Q*NITRLTFSFKAGKGLT 359
>gb|DT516220.1|DT516220 WS02430.B21_L23 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02430_L23 3', mRNA sequence
Length = 910
Score = 191 bits (412), Expect(2) = 1e-054
Identities = 73/85 (85%), Positives = 80/85 (94%)
Frame = +1 / -3
Query: 1 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAY 180
EFDFYLCSHAGIQGTSRPAHYHVLWDEN FTAD +Q+LTNNLCYTYARCTRSVS+VPPAY
Sbjct: 698 EFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADGLQSLTNNLCYTYARCTRSVSIVPPAY 519
Query: 181 YAHLAAFRARFYMEPEMSENQTSKS 255
YAHLAAFRARFYMEPE S++++ S
Sbjct: 518 YAHLAAFRARFYMEPETSDSESIAS 444
Score = 102 bits (218), Expect(2) = 5e-025
Identities = 54/78 (69%), Positives = 57/78 (73%)
Frame = -1 / +1
Query: 236 SDISGSMXXXXXXXXRCA*YAGGTTETERVHRA*V*QRLFVSVCISSAVKLFSSQRTW** 57
SD+SGSM R A*YAGGT ET+ VHRA V*QRLFV C SAV LFSSQ TW**
Sbjct: 463 SDVSGSM*KRARNAAR*A*YAGGTMETDLVHRAYV*QRLFVRDCSPSAVNLFSSQSTW** 642
Query: 56 AGLLVPWIPA*LQR*KSN 3
AG LVP IPA*L +*KSN
Sbjct: 643 AGRLVP*IPA*LHK*KSN 696
Score = 41.8 bits (85), Expect(2) = 1e-054
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = +1 / -3
Query: 280 VKPLPAVKEKVKRVMFYC* 336
V+PLPA+KE VKRVMFYC*
Sbjct: 371 VRPLPALKENVKRVMFYC* 315
Score = 31.3 bits (62), Expect(2) = 5e-025
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = -1 / +1
Query: 332 Q*NITLFTFSFTAGRGFT 279
Q*NIT TFSF AG+G T
Sbjct: 319 Q*NITRLTFSFKAGKGLT 372
>gb|CV274847.1|CV274847 WS0174.B21.1_J06 PTxD-NR-A-8 Populus trichocarpa x Populus
deltoides cDNA clone WS0174_J06 3', mRNA sequence
Length = 849
Score = 191 bits (412), Expect(2) = 1e-054
Identities = 73/85 (85%), Positives = 80/85 (94%)
Frame = +1 / -2
Query: 1 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAY 180
EFDFYLCSHAGIQGTSRPAHYHVLWDEN FTAD +Q+LTNNLCYTYARCTRSVS+VPPAY
Sbjct: 674 EFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADGLQSLTNNLCYTYARCTRSVSIVPPAY 495
Query: 181 YAHLAAFRARFYMEPEMSENQTSKS 255
YAHLAAFRARFYMEPE S++++ S
Sbjct: 494 YAHLAAFRARFYMEPETSDSESIAS 420
Score = 105 bits (225), Expect(2) = 6e-026
Identities = 55/78 (70%), Positives = 58/78 (74%)
Frame = -1 / +1
Query: 236 SDISGSMXXXXXXXXRCA*YAGGTTETERVHRA*V*QRLFVSVCISSAVKLFSSQRTW** 57
SD+SGSM R A*YAGGT ET+RVHRA V*QRLFV C SAV LFSSQ TW**
Sbjct: 439 SDVSGSM*KRARNAAR*A*YAGGTMETDRVHRAYV*QRLFVRDCSPSAVNLFSSQSTW** 618
Query: 56 AGLLVPWIPA*LQR*KSN 3
AG LVP IPA*L +*KSN
Sbjct: 619 AGRLVP*IPA*LHK*KSN 672
Score = 41.8 bits (85), Expect(2) = 1e-054
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = +1 / -2
Query: 280 VKPLPAVKEKVKRVMFYC* 336
V+PLPA+KE VKRVMFYC*
Sbjct: 347 VRPLPALKENVKRVMFYC* 291
Score = 31.3 bits (62), Expect(2) = 6e-026
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = -1 / +1
Query: 332 Q*NITLFTFSFTAGRGFT 279
Q*NIT TFSF AG+G T
Sbjct: 295 Q*NITRLTFSFKAGKGLT 348
>gb|DV464515.1|DV464515 MTUNUL1.P28.E03 NUL Populus fremontii x Populus angustifolia cDNA,
mRNA sequence
Length = 830
Score = 191 bits (412), Expect(2) = 1e-054
Identities = 73/85 (85%), Positives = 80/85 (94%)
Frame = +1 / -3
Query: 1 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAY 180
EFDFYLCSHAGIQGTSRPAHYHVLWDEN FTAD +Q+LTNNLCYTYARCTRSVS+VPPAY
Sbjct: 669 EFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADGLQSLTNNLCYTYARCTRSVSIVPPAY 490
Query: 181 YAHLAAFRARFYMEPEMSENQTSKS 255
YAHLAAFRARFYMEPE S++++ S
Sbjct: 489 YAHLAAFRARFYMEPETSDSESIAS 415
Score = 105 bits (225), Expect(2) = 6e-026
Identities = 55/78 (70%), Positives = 58/78 (74%)
Frame = -1 / +2
Query: 236 SDISGSMXXXXXXXXRCA*YAGGTTETERVHRA*V*QRLFVSVCISSAVKLFSSQRTW** 57
SD+SGSM R A*YAGGT ET+RVHRA V*QRLFV C SAV LFSSQ TW**
Sbjct: 434 SDVSGSM*KRARNAAR*A*YAGGTMETDRVHRAYV*QRLFVRDCSPSAVNLFSSQSTW** 613
Query: 56 AGLLVPWIPA*LQR*KSN 3
AG LVP IPA*L +*KSN
Sbjct: 614 AGRLVP*IPA*LHK*KSN 667
Score = 41.8 bits (85), Expect(2) = 1e-054
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = +1 / -3
Query: 280 VKPLPAVKEKVKRVMFYC* 336
V+PLPA+KE VKRVMFYC*
Sbjct: 342 VRPLPALKENVKRVMFYC* 286
Score = 31.3 bits (62), Expect(2) = 6e-026
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = -1 / +2
Query: 332 Q*NITLFTFSFTAGRGFT 279
Q*NIT TFSF AG+G T
Sbjct: 290 Q*NITRLTFSFKAGKGLT 343
>gb|CV227387.1|CV227387 WS0167.B21_A17 PT-DX-A-7 Populus trichocarpa cDNA clone WS0167_A17
3', mRNA sequence
Length = 709
Score = 191 bits (412), Expect(2) = 1e-054
Identities = 73/85 (85%), Positives = 80/85 (94%)
Frame = +1 / +3
Query: 1 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAY 180
EFDFYLCSHAGIQGTSRPAHYHVLWDEN FTAD +Q+LTNNLCYTYARCTRSVS+VPPAY
Sbjct: 21 EFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADGLQSLTNNLCYTYARCTRSVSIVPPAY 200
Query: 181 YAHLAAFRARFYMEPEMSENQTSKS 255
YAHLAAFRARFYMEPE S++++ S
Sbjct: 201 YAHLAAFRARFYMEPETSDSESIAS 275
Score = 105 bits (225), Expect(2) = 6e-026
Identities = 55/78 (70%), Positives = 58/78 (74%)
Frame = -1 / -1
Query: 236 SDISGSMXXXXXXXXRCA*YAGGTTETERVHRA*V*QRLFVSVCISSAVKLFSSQRTW** 57
SD+SGSM R A*YAGGT ET+RVHRA V*QRLFV C SAV LFSSQ TW**
Sbjct: 256 SDVSGSM*KRARNAAR*A*YAGGTMETDRVHRAYV*QRLFVRDCSPSAVNLFSSQSTW** 77
Query: 56 AGLLVPWIPA*LQR*KSN 3
AG LVP IPA*L +*KSN
Sbjct: 76 AGRLVP*IPA*LHK*KSN 23
Score = 41.8 bits (85), Expect(2) = 1e-054
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = +1 / +3
Query: 280 VKPLPAVKEKVKRVMFYC* 336
V+PLPA+KE VKRVMFYC*
Sbjct: 348 VRPLPALKENVKRVMFYC* 404
Score = 31.3 bits (62), Expect(2) = 6e-026
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = -1 / -1
Query: 332 Q*NITLFTFSFTAGRGFT 279
Q*NIT TFSF AG+G T
Sbjct: 400 Q*NITRLTFSFKAGKGLT 347
>gb|CV269160.1|CV269160 WS0207.B21_H21 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS0207_H21 3', mRNA sequence
Length = 688
Score = 191 bits (412), Expect(2) = 1e-054
Identities = 73/85 (85%), Positives = 80/85 (94%)
Frame = +1 / -1
Query: 1 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAY 180
EFDFYLCSHAGIQGTSRPAHYHVLWDEN FTAD +Q+LTNNLCYTYARCTRSVS+VPPAY
Sbjct: 685 EFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADGLQSLTNNLCYTYARCTRSVSIVPPAY 506
Query: 181 YAHLAAFRARFYMEPEMSENQTSKS 255
YAHLAAFRARFYMEPE S++++ S
Sbjct: 505 YAHLAAFRARFYMEPETSDSESIAS 431
Score = 105 bits (225), Expect(2) = 6e-026
Identities = 55/78 (70%), Positives = 58/78 (74%)
Frame = -1 / +3
Query: 236 SDISGSMXXXXXXXXRCA*YAGGTTETERVHRA*V*QRLFVSVCISSAVKLFSSQRTW** 57
SD+SGSM R A*YAGGT ET+RVHRA V*QRLFV C SAV LFSSQ TW**
Sbjct: 450 SDVSGSM*KRARNAAR*A*YAGGTMETDRVHRAYV*QRLFVRDCSPSAVNLFSSQSTW** 629
Query: 56 AGLLVPWIPA*LQR*KSN 3
AG LVP IPA*L +*KSN
Sbjct: 630 AGRLVP*IPA*LHK*KSN 683
Score = 41.8 bits (85), Expect(2) = 1e-054
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = +1 / -1
Query: 280 VKPLPAVKEKVKRVMFYC* 336
V+PLPA+KE VKRVMFYC*
Sbjct: 358 VRPLPALKENVKRVMFYC* 302
Score = 31.3 bits (62), Expect(2) = 6e-026
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = -1 / +3
Query: 332 Q*NITLFTFSFTAGRGFT 279
Q*NIT TFSF AG+G T
Sbjct: 306 Q*NITRLTFSFKAGKGLT 359
>gb|BU896276.1|BU896276 X038C04 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 679
Score = 191 bits (412), Expect(2) = 1e-054
Identities = 73/85 (85%), Positives = 80/85 (94%)
Frame = +1 / +2
Query: 1 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAY 180
EFDFYLCSHAGIQGTSRPAHYHVLWDEN FTAD +Q+LTNNLCYTYARCTRSVS+VPPAY
Sbjct: 62 EFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADGLQSLTNNLCYTYARCTRSVSIVPPAY 241
Query: 181 YAHLAAFRARFYMEPEMSENQTSKS 255
YAHLAAFRARFYMEPE S++++ S
Sbjct: 242 YAHLAAFRARFYMEPETSDSESIAS 316
Score = 104 bits (222), Expect(2) = 1e-025
Identities = 55/78 (70%), Positives = 57/78 (73%)
Frame = -1 / -2
Query: 236 SDISGSMXXXXXXXXRCA*YAGGTTETERVHRA*V*QRLFVSVCISSAVKLFSSQRTW** 57
SD+SGSM R A*YAGGT ETERVHRA V* RLFV C SAV LFSSQ TW**
Sbjct: 297 SDVSGSM*KRARNAAR*A*YAGGTMETERVHRAYV*HRLFVRDCNPSAVNLFSSQSTW** 118
Query: 56 AGLLVPWIPA*LQR*KSN 3
AG LVP IPA*L +*KSN
Sbjct: 117 AGRLVP*IPA*LHK*KSN 64
Score = 41.8 bits (85), Expect(2) = 1e-054
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = +1 / +3
Query: 280 VKPLPAVKEKVKRVMFYC* 336
V+PLPA+KE VKRVMFYC*
Sbjct: 390 VRPLPALKENVKRVMFYC* 446
Score = 31.3 bits (62), Expect(2) = 1e-025
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = -1 / -1
Query: 332 Q*NITLFTFSFTAGRGFT 279
Q*NIT TFSF AG+G T
Sbjct: 442 Q*NITRLTFSFKAGKGLT 389
>gb|CV241850.1|CV241850 WS02513.B21_G18 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02513_G18 3', mRNA sequence
Length = 677
Score = 191 bits (412), Expect(2) = 1e-054
Identities = 73/85 (85%), Positives = 80/85 (94%)
Frame = +1 / -1
Query: 1 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAY 180
EFDFYLCSHAGIQGTSRPAHYHVLWDEN FTAD +Q+LTNNLCYTYARCTRSVS+VPPAY
Sbjct: 674 EFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADGLQSLTNNLCYTYARCTRSVSIVPPAY 495
Query: 181 YAHLAAFRARFYMEPEMSENQTSKS 255
YAHLAAFRARFYMEPE S++++ S
Sbjct: 494 YAHLAAFRARFYMEPETSDSESIAS 420
Score = 105 bits (225), Expect(2) = 6e-026
Identities = 55/78 (70%), Positives = 58/78 (74%)
Frame = -1 / +1
Query: 236 SDISGSMXXXXXXXXRCA*YAGGTTETERVHRA*V*QRLFVSVCISSAVKLFSSQRTW** 57
SD+SGSM R A*YAGGT ET+RVHRA V*QRLFV C SAV LFSSQ TW**
Sbjct: 439 SDVSGSM*KRARNAAR*A*YAGGTMETDRVHRAYV*QRLFVRDCSPSAVNLFSSQSTW** 618
Query: 56 AGLLVPWIPA*LQR*KSN 3
AG LVP IPA*L +*KSN
Sbjct: 619 AGRLVP*IPA*LHK*KSN 672
Score = 41.8 bits (85), Expect(2) = 1e-054
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = +1 / -1
Query: 280 VKPLPAVKEKVKRVMFYC* 336
V+PLPA+KE VKRVMFYC*
Sbjct: 347 VRPLPALKENVKRVMFYC* 291
Score = 31.3 bits (62), Expect(2) = 6e-026
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = -1 / +1
Query: 332 Q*NITLFTFSFTAGRGFT 279
Q*NIT TFSF AG+G T
Sbjct: 295 Q*NITRLTFSFKAGKGLT 348
>gb|BU896297.1|BU896297 X038E11 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 666
Score = 191 bits (412), Expect(2) = 1e-054
Identities = 73/85 (85%), Positives = 80/85 (94%)
Frame = +1 / +2
Query: 1 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAY 180
EFDFYLCSHAGIQGTSRPAHYHVLWDEN FTAD +Q+LTNNLCYTYARCTRSVS+VPPAY
Sbjct: 62 EFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADGLQSLTNNLCYTYARCTRSVSIVPPAY 241
Query: 181 YAHLAAFRARFYMEPEMSENQTSKS 255
YAHLAAFRARFYMEPE S++++ S
Sbjct: 242 YAHLAAFRARFYMEPETSDSESIAS 316
Score = 104 bits (222), Expect(2) = 1e-025
Identities = 55/78 (70%), Positives = 57/78 (73%)
Frame = -1 / -1
Query: 236 SDISGSMXXXXXXXXRCA*YAGGTTETERVHRA*V*QRLFVSVCISSAVKLFSSQRTW** 57
SD+SGSM R A*YAGGT ETERVHRA V* RLFV C SAV LFSSQ TW**
Sbjct: 297 SDVSGSM*KRARNAAR*A*YAGGTMETERVHRAYV*HRLFVRDCNPSAVNLFSSQSTW** 118
Query: 56 AGLLVPWIPA*LQR*KSN 3
AG LVP IPA*L +*KSN
Sbjct: 117 AGRLVP*IPA*LHK*KSN 64
Score = 41.8 bits (85), Expect(2) = 1e-054
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = +1 / +2
Query: 280 VKPLPAVKEKVKRVMFYC* 336
V+PLPA+KE VKRVMFYC*
Sbjct: 389 VRPLPALKENVKRVMFYC* 445
Score = 31.3 bits (62), Expect(2) = 1e-025
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = -1 / -1
Query: 332 Q*NITLFTFSFTAGRGFT 279
Q*NIT TFSF AG+G T
Sbjct: 441 Q*NITRLTFSFKAGKGLT 388
>gb|BU894478.1|BU894478 X010A02 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 650
Score = 191 bits (412), Expect(2) = 1e-054
Identities = 73/85 (85%), Positives = 80/85 (94%)
Frame = +1 / +3
Query: 1 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAY 180
EFDFYLCSHAGIQGTSRPAHYHVLWDEN FTAD +Q+LTNNLCYTYARCTRSVS+VPPAY
Sbjct: 75 EFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADGLQSLTNNLCYTYARCTRSVSIVPPAY 254
Query: 181 YAHLAAFRARFYMEPEMSENQTSKS 255
YAHLAAFRARFYMEPE S++++ S
Sbjct: 255 YAHLAAFRARFYMEPETSDSESIAS 329
Score = 104 bits (222), Expect(2) = 1e-025
Identities = 55/78 (70%), Positives = 57/78 (73%)
Frame = -1 / -2
Query: 236 SDISGSMXXXXXXXXRCA*YAGGTTETERVHRA*V*QRLFVSVCISSAVKLFSSQRTW** 57
SD+SGSM R A*YAGGT ETERVHRA V* RLFV C SAV LFSSQ TW**
Sbjct: 310 SDVSGSM*KRARNAAR*A*YAGGTMETERVHRAYV*HRLFVRDCNPSAVNLFSSQSTW** 131
Query: 56 AGLLVPWIPA*LQR*KSN 3
AG LVP IPA*L +*KSN
Sbjct: 130 AGRLVP*IPA*LHK*KSN 77
Score = 41.8 bits (85), Expect(2) = 1e-054
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = +1 / +3
Query: 280 VKPLPAVKEKVKRVMFYC* 336
V+PLPA+KE VKRVMFYC*
Sbjct: 402 VRPLPALKENVKRVMFYC* 458
Score = 31.3 bits (62), Expect(2) = 1e-025
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = -1 / -2
Query: 332 Q*NITLFTFSFTAGRGFT 279
Q*NIT TFSF AG+G T
Sbjct: 454 Q*NITRLTFSFKAGKGLT 401
>gb|CX171314.1|CX171314 G11_69-94_13.ab1 leaf inoculated with Marssonia pathogen of Populus
deltoides Populus deltoides cDNA, mRNA sequence
Length = 555
Score = 191 bits (412), Expect(2) = 1e-054
Identities = 73/85 (85%), Positives = 80/85 (94%)
Frame = +1 / +3
Query: 1 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAY 180
EFDFYLCSHAGIQGTSRPAHYHVLWDEN FTAD +Q+LTNNLCYTYARCTRSVS+VPPAY
Sbjct: 99 EFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADGLQSLTNNLCYTYARCTRSVSIVPPAY 278
Query: 181 YAHLAAFRARFYMEPEMSENQTSKS 255
YAHLAAFRARFYMEPE S++++ S
Sbjct: 279 YAHLAAFRARFYMEPETSDSESIAS 353
Score = 105 bits (225), Expect(2) = 6e-026
Identities = 55/78 (70%), Positives = 58/78 (74%)
Frame = -1 / -3
Query: 236 SDISGSMXXXXXXXXRCA*YAGGTTETERVHRA*V*QRLFVSVCISSAVKLFSSQRTW** 57
SD+SGSM R A*YAGGT ET+RVHRA V*QRLFV C SAV LFSSQ TW**
Sbjct: 334 SDVSGSM*KRARNAAR*A*YAGGTMETDRVHRAYV*QRLFVRDCSPSAVNLFSSQSTW** 155
Query: 56 AGLLVPWIPA*LQR*KSN 3
AG LVP IPA*L +*KSN
Sbjct: 154 AGRLVP*IPA*LHK*KSN 101
Score = 41.8 bits (85), Expect(2) = 1e-054
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = +1 / +3
Query: 280 VKPLPAVKEKVKRVMFYC* 336
V+PLPA+KE VKRVMFYC*
Sbjct: 426 VRPLPALKENVKRVMFYC* 482
Score = 31.3 bits (62), Expect(2) = 6e-026
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = -1 / -3
Query: 332 Q*NITLFTFSFTAGRGFT 279
Q*NIT TFSF AG+G T
Sbjct: 478 Q*NITRLTFSFKAGKGLT 425
>gb|CK099351.1|CK099351 A063P66.5pR Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA clone A063P66 5', mRNA sequence
Length = 546
Score = 191 bits (412), Expect(2) = 1e-054
Identities = 73/85 (85%), Positives = 80/85 (94%)
Frame = +1 / +1
Query: 1 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAY 180
EFDFYLCSHAGIQGTSRPAHYHVLWDEN FTAD +Q+LTNNLCYTYARCTRSVS+VPPAY
Sbjct: 52 EFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADGLQSLTNNLCYTYARCTRSVSIVPPAY 231
Query: 181 YAHLAAFRARFYMEPEMSENQTSKS 255
YAHLAAFRARFYMEPE S++++ S
Sbjct: 232 YAHLAAFRARFYMEPETSDSESIAS 306
Score = 104 bits (222), Expect(2) = 1e-025
Identities = 55/78 (70%), Positives = 57/78 (73%)
Frame = -1 / -2
Query: 236 SDISGSMXXXXXXXXRCA*YAGGTTETERVHRA*V*QRLFVSVCISSAVKLFSSQRTW** 57
SD+SGSM R A*YAGGT ETERVHRA V* RLFV C SAV LFSSQ TW**
Sbjct: 287 SDVSGSM*KRARNAAR*A*YAGGTMETERVHRAYV*HRLFVRDCNPSAVNLFSSQSTW** 108
Query: 56 AGLLVPWIPA*LQR*KSN 3
AG LVP IPA*L +*KSN
Sbjct: 107 AGRLVP*IPA*LHK*KSN 54
Score = 41.8 bits (85), Expect(2) = 1e-054
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = +1 / +1
Query: 280 VKPLPAVKEKVKRVMFYC* 336
V+PLPA+KE VKRVMFYC*
Sbjct: 379 VRPLPALKENVKRVMFYC* 435
Score = 31.3 bits (62), Expect(2) = 1e-025
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = -1 / -2
Query: 332 Q*NITLFTFSFTAGRGFT 279
Q*NIT TFSF AG+G T
Sbjct: 431 Q*NITRLTFSFKAGKGLT 378
>gb|CV231236.1|CV231236 WS0193.B21_O22 PT-DX-N-A-10 Populus trichocarpa cDNA clone
WS0193_O22 3', mRNA sequence
Length = 875
Score = 190 bits (410), Expect(2) = 2e-054
Identities = 74/92 (80%), Positives = 80/92 (86%)
Frame = +1 / -1
Query: 1 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAY 180
EFDFYLCSHAGIQGTSRPAHYHVLWDEN FTAD +Q+LTNNLCYTYARCTRSVS+VPPAY
Sbjct: 593 EFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADGLQSLTNNLCYTYARCTRSVSIVPPAY 414
Query: 181 YAHLAAFRARFYMEPEMSENQTSKSSNGTNGG 276
YAHLAAFRARFYMEPE S++ + S G
Sbjct: 413 YAHLAAFRARFYMEPETSDSGSLTSGMAAGRG 318
Score = 109 bits (233), Expect(2) = 2e-027
Identities = 56/78 (71%), Positives = 58/78 (74%)
Frame = -1 / +1
Query: 236 SDISGSMXXXXXXXXRCA*YAGGTTETERVHRA*V*QRLFVSVCISSAVKLFSSQRTW** 57
SD+SGSM RCA*YAGGT ETERVH A V*QRLFV C SAV LFSSQ TW**
Sbjct: 358 SDVSGSM*KRARNAARCA*YAGGTMETERVHLAYV*QRLFVRDCNPSAVNLFSSQSTW** 537
Query: 56 AGLLVPWIPA*LQR*KSN 3
AG LVP IPA*L +*KSN
Sbjct: 538 AGRLVP*IPA*LHK*KSN 591
Score = 41.8 bits (85), Expect(2) = 2e-054
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = +1 / -1
Query: 280 VKPLPAVKEKVKRVMFYC* 336
V+PLPA+KE VKRVMFYC*
Sbjct: 266 VRPLPALKENVKRVMFYC* 210
Score = 32.7 bits (65), Expect(2) = 2e-027
Identities = 14/18 (77%), Positives = 14/18 (77%)
Frame = -1 / +1
Query: 332 Q*NITLFTFSFTAGRGFT 279
Q*NIT TFSF AGRG T
Sbjct: 214 Q*NITRLTFSFKAGRGLT 267
>gb|CK097248.1|CK097248 UB44DPH02.3pR Populus active cambium cDNA library Populus tremula
cDNA clone UB44DPH02 3', mRNA sequence
Length = 762
Score = 190 bits (409), Expect(2) = 3e-054
Identities = 74/92 (80%), Positives = 80/92 (86%)
Frame = +1 / -2
Query: 1 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAY 180
EFDFYLCSHAGIQGTSRPAHYHVLWDEN FTAD +Q+LTNNLCYTYARCTRSVS+VPPAY
Sbjct: 458 EFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADGLQSLTNNLCYTYARCTRSVSIVPPAY 279
Query: 181 YAHLAAFRARFYMEPEMSENQTSKSSNGTNGG 276
YAHLAAFRARFYMEPE S++ + S G
Sbjct: 278 YAHLAAFRARFYMEPETSDSGSLTSGMAPGRG 183
Score = 109 bits (233), Expect(2) = 2e-027
Identities = 56/78 (71%), Positives = 58/78 (74%)
Frame = -1 / +1
Query: 236 SDISGSMXXXXXXXXRCA*YAGGTTETERVHRA*V*QRLFVSVCISSAVKLFSSQRTW** 57
SD+SGSM RCA*YAGGT ETERVH A V*QRLFV C SAV LFSSQ TW**
Sbjct: 223 SDVSGSM*KRARNAARCA*YAGGTMETERVHLAYV*QRLFVRDCNPSAVNLFSSQSTW** 402
Query: 56 AGLLVPWIPA*LQR*KSN 3
AG LVP IPA*L +*KSN
Sbjct: 403 AGRLVP*IPA*LHK*KSN 456
Score = 41.8 bits (85), Expect(2) = 3e-054
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = +1 / -2
Query: 280 VKPLPAVKEKVKRVMFYC* 336
V+PLPA+KE VKRVMFYC*
Sbjct: 131 VRPLPALKENVKRVMFYC* 75
Score = 32.7 bits (65), Expect(2) = 2e-027
Identities = 14/18 (77%), Positives = 14/18 (77%)
Frame = -1 / +1
Query: 332 Q*NITLFTFSFTAGRGFT 279
Q*NIT TFSF AGRG T
Sbjct: 79 Q*NITRLTFSFKAGRGLT 132
>gb|BU898140.1|BU898140 X075D09 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 623
Score = 189 bits (408), Expect(2) = 4e-054
Identities = 72/85 (84%), Positives = 79/85 (92%)
Frame = +1 / +1
Query: 1 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAY 180
EFDFYLCSHAGIQGTSRPAHYHVLWDEN FTAD +Q+LTNNLCYTYARCTRSVS+VPPAY
Sbjct: 136 EFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADGLQSLTNNLCYTYARCTRSVSIVPPAY 315
Query: 181 YAHLAAFRARFYMEPEMSENQTSKS 255
YAHL AFRARFYMEPE S++++ S
Sbjct: 316 YAHLVAFRARFYMEPETSDSESIAS 390
Score = 104 bits (222), Expect(2) = 1e-025
Identities = 55/78 (70%), Positives = 57/78 (73%)
Frame = -1 / -1
Query: 236 SDISGSMXXXXXXXXRCA*YAGGTTETERVHRA*V*QRLFVSVCISSAVKLFSSQRTW** 57
SD+SGSM R A*YAGGT ETERVHRA V* RLFV C SAV LFSSQ TW**
Sbjct: 371 SDVSGSM*KRARNATR*A*YAGGTMETERVHRAYV*HRLFVRDCNPSAVNLFSSQSTW** 192
Query: 56 AGLLVPWIPA*LQR*KSN 3
AG LVP IPA*L +*KSN
Sbjct: 191 AGRLVP*IPA*LHK*KSN 138
Score = 41.8 bits (85), Expect(2) = 4e-054
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = +1 / +2
Query: 280 VKPLPAVKEKVKRVMFYC* 336
V+PLPA+KE VKRVMFYC*
Sbjct: 464 VRPLPALKENVKRVMFYC* 520
Score = 31.3 bits (62), Expect(2) = 1e-025
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = -1 / -3
Query: 332 Q*NITLFTFSFTAGRGFT 279
Q*NIT TFSF AG+G T
Sbjct: 516 Q*NITRLTFSFKAGKGLT 463
>gb|BU891188.1|BU891188 P047A12 Populus petioles cDNA library Populus tremula cDNA 5 prime,
mRNA sequence
Length = 494
Score = 188 bits (404), Expect(2) = 1e-053
Identities = 73/92 (79%), Positives = 80/92 (86%)
Frame = +1 / +3
Query: 1 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAY 180
EF+FYLCSHAGIQGTSRPAHYHVLWDEN FTAD +Q+LTNNLCYTYARCTRSVS+VPPAY
Sbjct: 24 EFNFYLCSHAGIQGTSRPAHYHVLWDENKFTADGLQSLTNNLCYTYARCTRSVSIVPPAY 203
Query: 181 YAHLAAFRARFYMEPEMSENQTSKSSNGTNGG 276
YAHLAAFRARFYMEPE S++ + S G
Sbjct: 204 YAHLAAFRARFYMEPETSDSGSLTSGMAPGRG 299
Score = 108 bits (230), Expect(2) = 5e-027
Identities = 56/78 (71%), Positives = 57/78 (73%)
Frame = -1 / -2
Query: 236 SDISGSMXXXXXXXXRCA*YAGGTTETERVHRA*V*QRLFVSVCISSAVKLFSSQRTW** 57
SD+SGSM RCA*YAGGT ETERVH A V*QRLFV C SAV LFSSQ TW**
Sbjct: 259 SDVSGSM*KRARNAARCA*YAGGTMETERVHLAYV*QRLFVRDCNPSAVNLFSSQSTW** 80
Query: 56 AGLLVPWIPA*LQR*KSN 3
AG LVP IPA*L R*K N
Sbjct: 79 AGRLVP*IPA*LHR*KLN 26
Score = 41.8 bits (85), Expect(2) = 1e-053
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = +1 / +3
Query: 280 VKPLPAVKEKVKRVMFYC* 336
V+PLPA+KE VKRVMFYC*
Sbjct: 351 VRPLPALKENVKRVMFYC* 407
Score = 32.7 bits (65), Expect(2) = 5e-027
Identities = 14/18 (77%), Positives = 14/18 (77%)
Frame = -1 / -2
Query: 332 Q*NITLFTFSFTAGRGFT 279
Q*NIT TFSF AGRG T
Sbjct: 403 Q*NITRLTFSFKAGRGLT 350
>gb|AJ772440.1|AJ772440 AJ772440 Populus euphratica shoot in vitro plantlet Israel Populus
euphratica cDNA clone P0001700006E12F1, mRNA sequence
Length = 418
Score = 193 bits (417), Expect = 6e-049
Identities = 76/88 (86%), Positives = 80/88 (90%)
Frame = +1 / +2
Query: 1 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAY 180
EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTAD +Q+LTNNLCYTYARCTRSVSVVPPAY
Sbjct: 119 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGIQSLTNNLCYTYARCTRSVSVVPPAY 298
Query: 181 YAHLAAFRARFYMEPEMSENQTSKSSNG 264
YAHLAAFRARFY EP M EN ++ S G
Sbjct: 299 YAHLAAFRARFYTEPVMQENGSAGSGAG 382
Score = 105 bits (224), Expect = 3e-022
Identities = 56/79 (70%), Positives = 60/79 (75%)
Frame = -1 / -2
Query: 239 FSDISGSMXXXXXXXXRCA*YAGGTTETERVHRA*V*QRLFVSVCISSAVKLFSSQRTW* 60
FS I+GS+ +CA*YAGGTTETERVH A V*QRLFV I SAVKLFSS +T *
Sbjct: 357 FSCITGSV*NRARKAAKCA*YAGGTTETERVHLAYV*QRLFVKDWIPSAVKLFSSHKT** 178
Query: 59 *AGLLVPWIPA*LQR*KSN 3
*AGLLVP IPA LQR*KSN
Sbjct: 177 *AGLLVP*IPAWLQR*KSN 121
>gb|DN488212.1|DN488212 R041G07.3pR Populus root cDNA library Populus tremula x Populus
tremuloides cDNA clone R041G07 3', mRNA sequence
Length = 811
Score = 171 bits (369), Expect(2) = 1e-048
Identities = 67/83 (80%), Positives = 76/83 (91%)
Frame = +1 / -3
Query: 1 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAY 180
EFDFYL SHAGIQGTSRP HYHVL+DENNF++D +QTLTNNLCYTYARCTRSVS+VPPAY
Sbjct: 596 EFDFYLNSHAGIQGTSRPTHYHVLFDENNFSSDGLQTLTNNLCYTYARCTRSVSIVPPAY 417
Query: 181 YAHLAAFRARFYMEPEMSENQTS 249
YAHLAAFRAR+Y+E E S+ +S
Sbjct: 416 YAHLAAFRARYYIEGETSDAGSS 348
Score = 91.3 bits (193), Expect(2) = 2e-021
Identities = 49/78 (62%), Positives = 53/78 (67%)
Frame = -1 / +1
Query: 236 SDISGSMXXXXXXXXRCA*YAGGTTETERVHRA*V*QRLFVSVCISSAVKLFSSQRTW** 57
SD+S SM R A*YAGGT ET+RVH A V* +L V VC S +KLFSS TW*
Sbjct: 361 SDVSPSM*YRALKAAR*A*YAGGTMETDRVHLAYV*HKLLVRVCKPSELKLFSSNNTW*C 540
Query: 56 AGLLVPWIPA*LQR*KSN 3
GLLVP IPA*L R*KSN
Sbjct: 541 VGLLVP*IPA*LLR*KSN 594
Score = 41.4 bits (84), Expect(2) = 1e-048
Identities = 18/34 (52%), Positives = 21/34 (61%)
Frame = +1 / -3
Query: 235 ENQTSKSSNGTNGGLVKPLPAVKEKVKRVMFYC* 336
E + SS GT +PLP +KE VK VMFYC*
Sbjct: 371 ETSDAGSSGGTAEFRFRPLPVIKENVKDVMFYC* 270
Score = 30.4 bits (60), Expect(2) = 2e-021
Identities = 14/25 (56%), Positives = 15/25 (60%)
Frame = -1 / +1
Query: 335 QQ*NITLFTFSFTAGRGFTKPPFVP 261
QQ*NIT TFS GRG + VP
Sbjct: 271 QQ*NITSLTFSLITGRGRNRNSAVP 345
>gb|BU894173.1|BU894173 X003H07 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 618
Score = 191 bits (412), Expect = 3e-048
Identities = 73/85 (85%), Positives = 80/85 (94%)
Frame = +1 / +1
Query: 1 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAY 180
EFDFYLCSHAGIQGTSRPAHYHVLWDEN FTAD +Q+LTNNLCYTYARCTRSVS+VPPAY
Sbjct: 343 EFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADGLQSLTNNLCYTYARCTRSVSIVPPAY 522
Query: 181 YAHLAAFRARFYMEPEMSENQTSKS 255
YAHLAAFRARFYMEPE S++++ S
Sbjct: 523 YAHLAAFRARFYMEPETSDSESIAS 597
Score = 104 bits (222), Expect = 5e-022
Identities = 55/78 (70%), Positives = 57/78 (73%)
Frame = -1 / -2
Query: 236 SDISGSMXXXXXXXXRCA*YAGGTTETERVHRA*V*QRLFVSVCISSAVKLFSSQRTW** 57
SD+SGSM R A*YAGGT ETERVHRA V* RLFV C SAV LFSSQ TW**
Sbjct: 578 SDVSGSM*KRARNAAR*A*YAGGTMETERVHRAYV*HRLFVRDCNPSAVNLFSSQSTW** 399
Query: 56 AGLLVPWIPA*LQR*KSN 3
AG LVP IPA*L +*KSN
Sbjct: 398 AGRLVP*IPA*LHK*KSN 345
>gb|BI127370.1|BI127370 G059P39Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 502
Score = 189 bits (408), Expect = 1e-047
Identities = 72/80 (90%), Positives = 77/80 (96%)
Frame = +1 / +2
Query: 1 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAY 180
EFDFYLCSHAGIQGTSRPAHYHVLWDEN FTAD +Q+LTNNLCYTYARCTRSVS+VPPAY
Sbjct: 263 EFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADGLQSLTNNLCYTYARCTRSVSIVPPAY 442
Query: 181 YAHLAAFRARFYMEPEMSEN 240
YAHLAAFRARFYMEPE S++
Sbjct: 443 YAHLAAFRARFYMEPETSDS 502
Score = 104 bits (222), Expect = 5e-022
Identities = 55/78 (70%), Positives = 57/78 (73%)
Frame = -1 / -2
Query: 236 SDISGSMXXXXXXXXRCA*YAGGTTETERVHRA*V*QRLFVSVCISSAVKLFSSQRTW** 57
SD+SGSM R A*YAGGT ETERVHRA V* RLFV C SAV LFSSQ TW**
Sbjct: 498 SDVSGSM*KRARNAAR*A*YAGGTMETERVHRAYV*HRLFVRDCNPSAVNLFSSQSTW** 319
Query: 56 AGLLVPWIPA*LQR*KSN 3
AG LVP IPA*L +*KSN
Sbjct: 318 AGRLVP*IPA*LHK*KSN 265
>gb|BU812023.1|BU812023 UL91TD02 Populus leaf cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 616
Score = 188 bits (405), Expect = 3e-047
Identities = 72/85 (84%), Positives = 79/85 (92%)
Frame = +1 / +2
Query: 1 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAY 180
EFDFYLCSHAGIQGTSRPAHYHVLWDEN FTAD +Q+LTNNLCYTYARCTRSVS+VPPAY
Sbjct: 299 EFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADGLQSLTNNLCYTYARCTRSVSIVPPAY 478
Query: 181 YAHLAAFRARFYMEPEMSENQTSKS 255
YAHLAAFRAR YMEPE S++++ S
Sbjct: 479 YAHLAAFRARXYMEPETSDSESIAS 553
Score = 104 bits (222), Expect = 5e-022
Identities = 56/78 (71%), Positives = 58/78 (74%)
Frame = -1 / -2
Query: 236 SDISGSMXXXXXXXXRCA*YAGGTTETERVHRA*V*QRLFVSVCISSAVKLFSSQRTW** 57
SD+SGSM R A*YAGGT ETERVHRA V* RLFV C SAV LFSSQ TW**
Sbjct: 534 SDVSGSM*XRARNAAR*A*YAGGTMETERVHRAYV*HRLFVRDCNPSAVNLFSSQSTW** 355
Query: 56 AGLLVPWIPA*LQR*KSN 3
AG LVP IPA*L +*KSN
Sbjct: 354 AGRLVP*IPA*LHK*KSN 301
>gb|CN524305.1|CN524305 GQ015M13.T3_E09 GQ015 Populus trichocarpa x Populus deltoides cDNA
clone GQ015M13_E09 5', mRNA sequence
Length = 849
Score = 172 bits (370), Expect(2) = 3e-046
Identities = 67/80 (83%), Positives = 74/80 (92%)
Frame = +1 / +3
Query: 1 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAY 180
EFDFYL SHAGIQGTSRP HYHVL+DENNFTAD +QTLTNNLCYTYARCTRSVS+VPPAY
Sbjct: 324 EFDFYLNSHAGIQGTSRPTHYHVLFDENNFTADGLQTLTNNLCYTYARCTRSVSIVPPAY 503
Query: 181 YAHLAAFRARFYMEPEMSEN 240
YAHLAAFRAR+Y+E S++
Sbjct: 504 YAHLAAFRARYYIEDVTSDS 563
Score = 98.2 bits (208), Expect(2) = 1e-022
Identities = 50/78 (64%), Positives = 55/78 (70%)
Frame = -1 / -3
Query: 236 SDISGSMXXXXXXXXRCA*YAGGTTETERVHRA*V*QRLFVSVCISSAVKLFSSQRTW** 57
SD++ SM + A*YAGGT ET+RVH A V* +LFV VC SAVKLFSS TW*
Sbjct: 559 SDVTSSM*YRALKAAKWA*YAGGTMETDRVHLAYV*HKLFVRVCKPSAVKLFSSNNTW*C 380
Query: 56 AGLLVPWIPA*LQR*KSN 3
GLLVP IPA*L R*KSN
Sbjct: 379 VGLLVP*IPA*LLR*KSN 326
Score = 32.7 bits (65), Expect(2) = 3e-046
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = +1 / +3
Query: 283 KPLPAVKEKVKRVMFYC* 336
+ LP VKE VK VMFYC*
Sbjct: 600 RSLPVVKENVKDVMFYC* 653
Score = 28.1 bits (55), Expect(2) = 1e-022
Identities = 12/16 (75%), Positives = 12/16 (75%)
Frame = -1 / -3
Query: 335 QQ*NITLFTFSFTAGR 288
QQ*NIT TFS T GR
Sbjct: 652 QQ*NITSLTFSLTTGR 605
>gb|BU818866.1|BU818866 UA35CPF05 Populus tremula cambium cDNA library Populus tremula cDNA
5 prime, mRNA sequence
Length = 503
Score = 176 bits (378), Expect(2) = 3e-046
Identities = 68/86 (79%), Positives = 79/86 (91%)
Frame = +1 / +2
Query: 1 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAY 180
EFDFYL SHAGIQGTSRP HYHVL+DENNFTAD +QTLTNNLCYTYARCTRSVS+VPPAY
Sbjct: 137 EFDFYLNSHAGIQGTSRPTHYHVLFDENNFTADGLQTLTNNLCYTYARCTRSVSIVPPAY 316
Query: 181 YAHLAAFRARFYMEPEMSENQTSKSS 258
YAHLAAFRAR+Y+E E S++ ++ ++
Sbjct: 317 YAHLAAFRARYYIEGETSDSGSTSAT 394
Score = 98.2 bits (208), Expect(2) = 5e-022
Identities = 51/78 (65%), Positives = 55/78 (70%)
Frame = -1 / -3
Query: 236 SDISGSMXXXXXXXXRCA*YAGGTTETERVHRA*V*QRLFVSVCISSAVKLFSSQRTW** 57
SD+S SM + A*YAGGT ET+RVH A*V* +L V VC SAVKLFSS TW*
Sbjct: 372 SDVSPSM*YRALKAAKWA*YAGGTMETDRVHLA*V*HKLLVRVCKPSAVKLFSSNNTW*C 193
Query: 56 AGLLVPWIPA*LQR*KSN 3
GLLVP IPA*L R*KSN
Sbjct: 192 VGLLVP*IPA*LLR*KSN 139
Score = 29.0 bits (57), Expect(2) = 3e-046
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = +1 / +2
Query: 283 KPLPAVKEKVKRVMFYC* 336
+ LP VKE VK VM YC*
Sbjct: 413 RSLPVVKENVKDVMSYC* 466
Score = 25.8 bits (50), Expect(2) = 5e-022
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = -1 / -3
Query: 335 QQ*NITLFTFSFTAGR 288
QQ*+IT TFS T GR
Sbjct: 465 QQ*DITSLTFSLTTGR 418
>gb|BU895787.1|BU895787 X031A06 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 568
Score = 156 bits (335), Expect(2) = 4e-044
Identities = 59/72 (81%), Positives = 67/72 (93%)
Frame = +1 / +3
Query: 40 GTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAYYAHLAAFRARFYM 219
GTSRPAHYHVLWD+N FTAD +Q+LTNNLCYTYARCTRSVS+VPPAYYAHLAAFRARFYM
Sbjct: 3 GTSRPAHYHVLWDDNKFTADGLQSLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYM 182
Query: 220 EPEMSENQTSKS 255
EPE S++++ S
Sbjct: 183 EPETSDSESIAS 218
Score = 41.8 bits (85), Expect(2) = 4e-044
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = +1 / +3
Query: 280 VKPLPAVKEKVKRVMFYC* 336
V+PLPA+KE VKRVMFYC*
Sbjct: 291 VRPLPALKENVKRVMFYC* 347
>gb|CV276089.1|CV276089 WS0178.B21.1_J13 PTxD-NR-A-8 Populus trichocarpa x Populus
deltoides cDNA clone WS0178_J13 3', mRNA sequence
Length = 618
Score = 155 bits (332), Expect(2) = 1e-043
Identities = 59/71 (83%), Positives = 66/71 (92%)
Frame = +1 / -2
Query: 43 TSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAYYAHLAAFRARFYME 222
TSRPAHYHVLWDEN FTAD +Q+LTNNLCYTYARCTRSVS+VPPAYYAHLAAFRARFYME
Sbjct: 617 TSRPAHYHVLWDENKFTADGLQSLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYME 438
Query: 223 PEMSENQTSKS 255
PE S++++ S
Sbjct: 437 PETSDSESIAS 405
Score = 41.8 bits (85), Expect(2) = 1e-043
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = +1 / -2
Query: 280 VKPLPAVKEKVKRVMFYC* 336
V+PLPA+KE VKRVMFYC*
Sbjct: 332 VRPLPALKENVKRVMFYC* 276
>gb|AI166241.1|AI166241 a063p66u Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA 5', mRNA sequence
Length = 382
Score = 140 bits (300), Expect(2) = 2e-041
Identities = 54/72 (75%), Positives = 61/72 (84%)
Frame = +1 / +3
Query: 40 GTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAYYAHLAAFRARFYM 219
G HYHVLWDEN FTAD +Q+LTNNLCYT ARCTRSVS+VPPAYYAHLAAFRARFYM
Sbjct: 66 GHKPSXHYHVLWDENKFTADGLQSLTNNLCYTXARCTRSVSIVPPAYYAHLAAFRARFYM 245
Query: 220 EPEMSENQTSKS 255
EPE S++++ S
Sbjct: 246 EPETSDSESIAS 281
Score = 49.2 bits (101), Expect(2) = 2e-041
Identities = 18/18 (100%), Positives = 18/18 (100%)
Frame = +1 / +1
Query: 1 EFDFYLCSHAGIQGTSRP 54
EFDFYLCSHAGIQGTSRP
Sbjct: 28 EFDFYLCSHAGIQGTSRP 81
>gb|BU880106.1|BU880106 UM41TE06 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 610
Score = 165 bits (354), Expect = 3e-040
Identities = 63/69 (91%), Positives = 66/69 (95%)
Frame = +1 / +3
Query: 1 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAY 180
EFDFYLCSHAGIQGTSRPAHYHVLWDEN FTAD +Q+LTNNLCYTYARCTRSVS+VPPAY
Sbjct: 402 EFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADGLQSLTNNLCYTYARCTRSVSIVPPAY 581
Query: 181 YAHLAAFRA 207
YAHLAA RA
Sbjct: 582 YAHLAASRA 608
>gb|DT480982.1|DT480982 WS02530.BR_I12 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02530_I12 5', mRNA sequence
Length = 733
Score = 153 bits (329), Expect(2) = 7e-040
Identities = 55/74 (74%), Positives = 64/74 (86%)
Frame = +1 / +3
Query: 1 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAY 180
EFDFYLCSH G++GTSRP HYHVLWDEN FT+DE+Q L NLCYT+ RCT+ VS+VPPAY
Sbjct: 69 EFDFYLCSHWGVKGTSRPTHYHVLWDENQFTSDELQKLVYNLCYTFVRCTKPVSLVPPAY 248
Query: 181 YAHLAAFRARFYME 222
YAHLAA+R R Y+E
Sbjct: 249 YAHLAAYRGRLYLE 290
Score = 30.4 bits (60), Expect(2) = 7e-040
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +1 / +3
Query: 286 PLPAVKEKVKRVMFYC* 336
PLP + E +K++MFYC*
Sbjct: 360 PLPKLSENLKKLMFYC* 410
>gb|DT486279.1|DT486279 WS02530.B21_I12 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02530_I12 3', mRNA sequence
Length = 733
Score = 153 bits (329), Expect(2) = 7e-040
Identities = 55/74 (74%), Positives = 64/74 (86%)
Frame = +1 / -3
Query: 1 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAY 180
EFDFYLCSH G++GTSRP HYHVLWDEN FT+DE+Q L NLCYT+ RCT+ VS+VPPAY
Sbjct: 665 EFDFYLCSHWGVKGTSRPTHYHVLWDENQFTSDELQKLVYNLCYTFVRCTKPVSLVPPAY 486
Query: 181 YAHLAAFRARFYME 222
YAHLAA+R R Y+E
Sbjct: 485 YAHLAAYRGRLYLE 444
Score = 30.4 bits (60), Expect(2) = 7e-040
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +1 / -3
Query: 286 PLPAVKEKVKRVMFYC* 336
PLP + E +K++MFYC*
Sbjct: 374 PLPKLSENLKKLMFYC* 324
>gb|AJ770191.1|AJ770191 AJ770191 Populus euphratica leaf 3-6 months, adult Populus
euphratica cDNA clone P0001100008E12F1, mRNA sequence
Length = 423
Score = 130 bits (278), Expect(2) = 2e-036
Identities = 51/69 (73%), Positives = 57/69 (82%)
Frame = +1 / +2
Query: 70 LWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAYYAHLAAFRARFYMEPEMSENQTS 249
LWDEN FTAD +Q+LTNNLCYTYARCTRSVS+VPPAYYAHLAAFRARFYMEPE S++ +
Sbjct: 2 LWDENKFTADGLQSLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPETSDSGSL 181
Query: 250 KSSNGTNGG 276
S G
Sbjct: 182 TSGMAAGRG 208
Score = 41.8 bits (85), Expect(2) = 2e-036
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = +1 / +2
Query: 280 VKPLPAVKEKVKRVMFYC* 336
V+PLPA+KE VKRVMFYC*
Sbjct: 260 VRPLPALKENVKRVMFYC* 316
>gb|CK100043.1|CK100043 B006P29.5pR Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA clone B006P29 5', mRNA sequence
Length = 475
Score = 148 bits (318), Expect = 3e-035
Identities = 57/61 (93%), Positives = 59/61 (96%)
Frame = +1 / +1
Query: 1 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAY 180
EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTAD +Q+LTNNL YTYARCTRSVSVVPPAY
Sbjct: 259 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGIQSLTNNLWYTYARCTRSVSVVPPAY 438
Query: 181 Y 183
Y
Sbjct: 439 Y 441
>gb|DN500128.1|DN500128 UB48DPE03.5pR Populus active cambium cDNA library Populus tremula
cDNA clone UB48DPE03 5', mRNA sequence
Length = 522
Score = 133 bits (284), Expect(2) = 4e-035
Identities = 51/63 (80%), Positives = 58/63 (92%)
Frame = +1 / +3
Query: 67 VLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAYYAHLAAFRARFYMEPEMSENQT 246
VLWDEN FTAD +Q+LTNNLCYTYARCTRSVS+VPPAYYAHLAAFRARFYMEPE S++++
Sbjct: 21 VLWDENKFTADGLQSLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPETSDSES 200
Query: 247 SKS 255
S
Sbjct: 201 IAS 209
Score = 35.0 bits (70), Expect(2) = 4e-035
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = +1 / +3
Query: 286 PLPAVKEKVKRVMFYC 333
PLPA+KE VKRVM YC
Sbjct: 288 PLPALKENVKRVMSYC 335
>gb|DN490157.1|DN490157 UB48DPE03.3pR Populus active cambium cDNA library Populus tremula
cDNA clone UB48DPE03 3', mRNA sequence
Length = 544
Score = 135 bits (289), Expect(2) = 7e-034
Identities = 53/69 (76%), Positives = 61/69 (88%)
Frame = +1 / -1
Query: 49 RPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAYYAHLAAFRARFYMEPE 228
RPAHYHVLWDEN FTAD +Q+LTNNL YTYARCTRSVS+VPPAYY LAAFRARF+MEPE
Sbjct: 541 RPAHYHVLWDENKFTADGLQSLTNNL*YTYARCTRSVSIVPPAYYDPLAAFRARFHMEPE 362
Query: 229 MSENQTSKS 255
S++++ S
Sbjct: 361 TSDSESIAS 335
Score = 28.6 bits (56), Expect(2) = 7e-034
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = +1 / -3
Query: 301 KEKVKRVMFYC* 336
KE VKRVMFYC*
Sbjct: 242 KENVKRVMFYC* 207
>gb|AJ773923.1|AJ773923 AJ773923 Populus euphratica shoot 3-6 months Populus euphratica
cDNA clone P0000300006F03F1, mRNA sequence
Length = 586
Score = 119 bits (254), Expect(2) = 5e-033
Identities = 46/58 (79%), Positives = 53/58 (91%)
Frame = +1 / +1
Query: 82 NNFTADEMQTLTNNLCYTYARCTRSVSVVPPAYYAHLAAFRARFYMEPEMSENQTSKS 255
N FTAD +Q+LTNNLCYTYARCTRSVS+VPPAYYAHLAAFRARFYMEPE S++++ S
Sbjct: 1 NKFTADGLQSLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPETSDSESIAS 174
Score = 41.8 bits (85), Expect(2) = 5e-033
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = +1 / +1
Query: 280 VKPLPAVKEKVKRVMFYC* 336
V+PLPA+KE VKRVMFYC*
Sbjct: 247 VRPLPALKENVKRVMFYC* 303
>gb|CV228921.1|CV228921 WS01911.B21_K08 PT-DX-N-A-10 Populus trichocarpa cDNA clone
WS01911_K08 3', mRNA sequence
Length = 563
Score = 111 bits (237), Expect(2) = 9e-031
Identities = 43/54 (79%), Positives = 50/54 (92%)
Frame = +1 / -1
Query: 94 ADEMQTLTNNLCYTYARCTRSVSVVPPAYYAHLAAFRARFYMEPEMSENQTSKS 255
AD +Q+LTNNLCYTYARCTRSVS+VPPAYYAHLAAFRARFYMEPE S++++ S
Sbjct: 560 ADGLQSLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPETSDSESIAS 399
Score = 41.8 bits (85), Expect(2) = 9e-031
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = +1 / -1
Query: 280 VKPLPAVKEKVKRVMFYC* 336
V+PLPA+KE VKRVMFYC*
Sbjct: 326 VRPLPALKENVKRVMFYC* 270
>gb|BU890263.1|BU890263 P034B07 Populus petioles cDNA library Populus tremula cDNA 5 prime,
mRNA sequence
Length = 548
Score = 100 bits (212), Expect(2) = 2e-027
Identities = 38/46 (82%), Positives = 43/46 (93%)
Frame = +1 / +3
Query: 118 NNLCYTYARCTRSVSVVPPAYYAHLAAFRARFYMEPEMSENQTSKS 255
NNLCYTYARCTRSVS+VPPAYYAHLAAFRARFYMEPE S++++ S
Sbjct: 30 NNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPETSDSESIAS 167
Score = 41.8 bits (85), Expect(2) = 2e-027
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = +1 / +3
Query: 280 VKPLPAVKEKVKRVMFYC* 336
V+PLPA+KE VKRVMFYC*
Sbjct: 240 VRPLPALKENVKRVMFYC* 296
>gb|BU827321.1|BU827321 UK131TC05 Populus apical shoot cDNA library Populus tremula x
Populus tremuloides cDNA 5 prime, mRNA sequence
Length = 472
Score = 115 bits (245), Expect = 3e-025
Identities = 48/79 (60%), Positives = 58/79 (73%)
Frame = +1 / +3
Query: 1 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAY 180
+FD+Y CS AGIQGTS P +HVL D N TAD + +NL T A CTR+VS+VPPAY
Sbjct: 138 DFDYYRCSCAGIQGTSAPPRHHVLGDYTNSTADGSRDRAHNLGSTSAACTRTVSIVPPAY 317
Query: 181 YAHLAAFRARFYMEPEMSE 237
AHLAAFRAR Y+EP+ S+
Sbjct: 318 DAHLAAFRARVYLEPDTSD 374
>gb|CV246013.1|CV246013 WS0259.B21_P22 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS0259_P22 3', mRNA sequence
Length = 744
Score = 108 bits (231), Expect(2) = 9e-025
Identities = 45/92 (48%), Positives = 61/92 (66%)
Frame = +1 / -2
Query: 7 DFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAYYA 186
DFYLC+HAG+ GT+RP HYHVL DE F+AD++Q L ++L Y Y R T ++SVV P YA
Sbjct: 668 DFYLCAHAGMIGTTRPTHYHVLLDEVGFSADDLQELVHSLSYVYQRSTTAISVVAPICYA 489
Query: 187 HLAAFRARFYMEPEMSENQTSKSSNGTNGGLV 282
HLAA + +M+ E + +S T+ G V
Sbjct: 488 HLAATQMGQFMKFEDTSETSSSHGGVTSAGAV 393
Score = 24.4 bits (47), Expect(2) = 9e-025
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +1 / -2
Query: 280 VKPLPAVKEKVKRVMFYC* 336
V LP ++EKV MF+C*
Sbjct: 389 VPQLPRLQEKVCNSMFFC* 333
>gb|AJ777572.1|AJ777572 AJ777572 Populus euphratica root 3-6 months Populus euphratica cDNA
clone P0000400030C07F1, mRNA sequence
Length = 687
Score = 111 bits (238), Expect = 3e-024
Identities = 39/54 (72%), Positives = 46/54 (85%)
Frame = +1 / +2
Query: 1 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVS 162
EFDFYLCSH G++GTS+P HYHVLWDEN FT+DE+Q L NLCYT+ RCT+ VS
Sbjct: 524 EFDFYLCSHWGVKGTSKPTHYHVLWDENQFTSDELQKLVYNLCYTFVRCTKPVS 685
>gb|BU835584.1|BU835584 T075G07 Populus apical shoot cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 574
Score = 105 bits (223), Expect(2) = 1e-023
Identities = 44/92 (47%), Positives = 61/92 (66%)
Frame = +1 / +1
Query: 7 DFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAYYA 186
DFYLC+HAG+ GT+RP HYHVL DE +F+AD++Q L ++L Y R T ++SVV P YA
Sbjct: 163 DFYLCAHAGMIGTTRPTHYHVLLDEVSFSADDLQELVHSLSYVCQRSTTAISVVAPICYA 342
Query: 187 HLAAFRARFYMEPEMSENQTSKSSNGTNGGLV 282
HLAA + +M+ E + +S T+ G V
Sbjct: 343 HLAATQMGQFMKFEDTSETSSSHGGVTSAGAV 438
Score = 24.4 bits (47), Expect(2) = 1e-023
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +1 / +1
Query: 280 VKPLPAVKEKVKRVMFYC* 336
V LP ++EKV MF+C*
Sbjct: 442 VPQLPRLQEKVCNSMFFC* 498
>gb|CN518723.1|CN518723 GQ0104.B3_E10 GQ010 Populus trichocarpa x Populus deltoides cDNA
clone GQ0104_E10 5', mRNA sequence
Length = 695
Score = 104 bits (221), Expect(2) = 2e-023
Identities = 43/92 (46%), Positives = 59/92 (64%)
Frame = +1 / +1
Query: 7 DFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAYYA 186
DFYLC+HAG+ +RP HYHVL DE F+AD++Q L ++L Y Y R T ++SVV P YA
Sbjct: 1 DFYLCAHAGMXXXTRPTHYHVLLDEVGFSADDLQELVHSLSYVYQRSTTAISVVAPICYA 180
Query: 187 HLAAFRARFYMEPEMSENQTSKSSNGTNGGLV 282
HLAA + +M+ E + +S T+ G V
Sbjct: 181 HLAATQMGQFMKFEDTSETSSSHGGVTSAGAV 276
Score = 24.4 bits (47), Expect(2) = 2e-023
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +1 / +1
Query: 280 VKPLPAVKEKVKRVMFYC* 336
V LP ++EKV MF+C*
Sbjct: 280 VPQLPRLQEKVCNSMFFC* 336
>gb|BU894661.1|BU894661 X012H09 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 814
Score = 93.6 bits (198), Expect(2) = 3e-022
Identities = 35/39 (89%), Positives = 37/39 (94%)
Frame = +1 / +2
Query: 1 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLT 117
EFDFYLCSHAGIQGTSRPAHYHVLWDEN FTAD +Q+LT
Sbjct: 668 EFDFYLCSHAGIQGTSRPAHYHVLWDENMFTADGLQSLT 784
Score = 31.3 bits (62), Expect(2) = 3e-022
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +1 / +1
Query: 118 NNLCYTYARC 147
NNLCYTYARC
Sbjct: 784 NNLCYTYARC 813
>gb|CN520738.1|CN520738 GQ0108.B3_L05 GQ010 Populus trichocarpa x Populus deltoides cDNA
clone GQ0108_L05 5', mRNA sequence
Length = 554
Score = 104 bits (222), Expect = 5e-022
Identities = 41/91 (45%), Positives = 60/91 (65%)
Frame = +1 / +2
Query: 4 FDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAYY 183
+DFY+C+HAG+ GT+RP HYHVL DE F+AD++Q L ++L Y Y R T ++SVV P Y
Sbjct: 62 YDFYMCAHAGMIGTTRPTHYHVLLDEIGFSADDLQELIHSLSYVYQRSTTAISVVAPVRY 241
Query: 184 AHLAAFRARFYMEPEMSENQTSKSSNGTNGG 276
AHLAA + +++ + +S T+ G
Sbjct: 242 AHLAATQISQFLKCDDMSETSSSHGGLTSAG 334
>gb|CV240638.1|CV240638 WS0251.B21_O23 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS0251_O23 3', mRNA sequence
Length = 872
Score = 104 bits (222), Expect = 5e-022
Identities = 41/91 (45%), Positives = 60/91 (65%)
Frame = +1 / -3
Query: 4 FDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAYY 183
+DFY+C+HAG+ GT+RP HYHVL DE F+AD++Q L ++L Y Y R T ++SVV P Y
Sbjct: 561 YDFYMCAHAGMIGTTRPTHYHVLLDEIGFSADDLQELIHSLSYVYQRSTTAISVVAPVRY 382
Query: 184 AHLAAFRARFYMEPEMSENQTSKSSNGTNGG 276
AHLAA + +++ + +S T+ G
Sbjct: 381 AHLAATQISQFLKCDDMSETSSSHGGLTSAG 289
>gb|DT469311.1|DT469311 WS01917.C21_G04 PT-DX-N-A-10 Populus trichocarpa cDNA clone
WS01917_G04 3', mRNA sequence
Length = 809
Score = 104 bits (222), Expect = 5e-022
Identities = 41/91 (45%), Positives = 60/91 (65%)
Frame = +1 / -3
Query: 4 FDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAYY 183
+DFY+C+HAG+ GT+RP HYHVL DE F+AD++Q L ++L Y Y R T ++SVV P Y
Sbjct: 546 YDFYMCAHAGMIGTTRPTHYHVLLDEIGFSADDLQELIHSLSYVYQRSTTAISVVAPVRY 367
Query: 184 AHLAAFRARFYMEPEMSENQTSKSSNGTNGG 276
AHLAA + +++ + +S T+ G
Sbjct: 366 AHLAATQISQFLKCDDMSETSSSHGGLTSAG 274
>gb|CV271647.1|CV271647 WS0155.B21_E13 PTxN-IB-A-6 Populus trichocarpa x Populus nigra cDNA
clone WS0155_E13 3', mRNA sequence
Length = 537
Score = 79.9 bits (168), Expect(2) = 2e-021
Identities = 31/39 (79%), Positives = 36/39 (92%)
Frame = +1 / -1
Query: 139 ARCTRSVSVVPPAYYAHLAAFRARFYMEPEMSENQTSKS 255
ARCTRSVS+VPPAYYAHLAAFRARFYMEPE S++++ S
Sbjct: 537 ARCTRSVSIVPPAYYAHLAAFRARFYMEPETSDSESIAS 421
Score = 41.8 bits (85), Expect(2) = 2e-021
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = +1 / -1
Query: 280 VKPLPAVKEKVKRVMFYC* 336
V+PLPA+KE VKRVMFYC*
Sbjct: 348 VRPLPALKENVKRVMFYC* 292
>gb|CV228507.1|CV228507 WS01910.B21_F21 PT-DX-N-A-10 Populus trichocarpa cDNA clone
WS01910_F21 3', mRNA sequence
Length = 629
Score = 88.6 bits (187), Expect(2) = 6e-021
Identities = 32/47 (68%), Positives = 39/47 (82%)
Frame = +1 / -2
Query: 82 NNFTADEMQTLTNNLCYTYARCTRSVSVVPPAYYAHLAAFRARFYME 222
N FT+DE+Q L NLCYT+ RCT+ VS+VPPAYYAHLAA+R R Y+E
Sbjct: 628 NQFTSDELQKLVYNLCYTFVRCTKPVSLVPPAYYAHLAAYRGRLYLE 488
Score = 31.8 bits (63), Expect(2) = 6e-021
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +1 / -2
Query: 286 PLPAVKEKVKRVMFYC*RGDRFNNHS 363
PLP + E +K++MFYC* R N S
Sbjct: 418 PLPKLSENLKKLMFYC*FLSRAMNSS 341
Database: Populus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:49 PM
Number of letters in database: 203,408,664
Number of sequences in database: 369,679
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 347,747,379
Number of Sequences: 369679
Number of extensions: 4985377
Number of successful extensions: 74280
Number of sequences better than 1.0e-020: 57
length of database: 67,802,888
effective HSP length: 51
effective length of database: 48,949,259
effective search space used: 7831881440
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)